scIBD Website Data
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dataset
modified on 2023-11-13, 12:59 Data files used in scIBD (www.scibd.cn) is also available here.
Gene expression matrix
Integrated gene expression matrix of scIBD (Anndata object in H5AD format) (scIBD.gex_matrix.h5ad and the raw count matrix scIBD.gex_matrix_raw.h5ad.zip, scIBD.gex_matrix_raw.rds)
Integrated gene expression matrix of scIBD (Seurat object in RDS format) (scIBD.gex_matrix.rds)
Meta data of scIBD (scIBD_sample_meta_data.txt.gz)
Differential expressed genes
Differential expressed genes across cell subtypes within each major cluster (scIBD.deg_by_major_cluster.rds)
Differential activated regulons
Differential regulons between healthy and disease in each major cluster (scIBD.diff_regulon_by_major_cluster.rds)
