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Primer sequences and conditions for PCR amplification for COI barcode of Cimex, presence of Wolbachia, presence of Symbiopectobacterium, and presence of Ca. Tisiphia

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modified on 2024-06-13, 09:46

Column 1: Primer pair name

Column 2 : Primer Sequence (5'- 3')

Column 3: Target organism

Column 4: Target Gene

Column 5: Ta (oC) (annealing temperature in PCR profile)

Column 6: Expected amplicon size (bp)

Column 7:References

Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology. 1994;3(5):294-9.

Hickin, M.L., Kakumanu, M.L. and Schal, C., 2022. Effects of Wolbachia elimination and B-vitamin supplementation on bed bug development and reproduction. Scientific Reports, 12(1), p.10270.

Küchler SM, Kehl S, Dettner K. Characterization, and localization of Rickettsia sp. in water beetles of genus Deronectes (Coleoptera: Dytiscidae). FEMS Microbiology Ecology. 2009;68(2):201-11.

Pilgrim J, Ander M, Garros C, Baylis M, Hurst GDD, Siozios S. Torix group Rickettsia are widespread in Culicoides biting midges (Diptera: Ceratopogonidae), reach high frequency and carry unique genomic features. Environ Microbiol. 2017;19(10):4238-55

Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P. Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Annals of the Entomological Society of America. 1994;87(6):651-701.

Funding

The Scientific and Technological Research Council of Türkiye, project number: 1059B192202296