#NEXUS [written Tue Oct 01 19:32:11 CST 2019 by Mesquite version 3.6 (build 917) at DESKTOP-GN36S29/114.212.116.44] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=46; TAXLABELS 'Protocalamostachys_arranensis' 'Calamocarpon_insignis' 'Calamostachys_americana' 'Calamostachys_binneyana' 'Calamostachys_casheana' 'Palaeostachya_andrewsi' 'Pendulostachys_cingulariformis' 'Calamostachys_inversibractis' 'Palaeostachya_decacnema' 'Mazostachys_pendulata' 'Weissistachys_kentuckiensis' 'Cruciaetheca_feruglioi' 'Cruciaetheca_patagonica' 'Paracalamitina_striata' 'Neocalamites_tubulatus ' 'Neocalamites_horridus' 'Equicalastrobus_pusillus sp. nov.' 'Equicalastrobus_chinleana ' 'Viridistachys_moltenensis' 'Viridistachys_gypsensis' 'Cetistachys_cetensis' 'Kraaiostachys_plaatkopensis' 'Equisetostachys_calensis' 'Equisetostachys_laggensis' 'Echinostachys_oblonga' 'Echinostachys_tinensis' 'Spaciinodum_collinsonii' 'Equisetites_arenaceus' 'Equisetum_thermale' 'Equisetum_dimorphum' 'Equisetum_laterale' 'Equisetum_fluviatoides' 'Equisetum_hyemale' 'Equisetum_variegatum' 'Equisetum_scirpoides' 'Equisetum_ramosissimum' 'Equisetum_giganteum' 'Equisetum_laevigatum' 'Equisetum_myriochaetum' 'Equisetum_fluviatile' 'Equisetum_palustre' 'Equisetum_diffusum' 'Equisetum_telmateia' 'Equisetum_arvense' 'Equisetum_sylvaticum' 'Equisetum_pratense' ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=42; FORMAT DATATYPE = STANDARD RESPECTCASE GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5"; CHARSTATELABELS 1 Arborescence / Absent Present, 2 'Determinacy_of_reproductive_zones' / Absent Present, 3 'Node-internode_differentiation_within_fertile_phytomers ' / Absent Present, 4 'Whorls_of_vegetative_units_regularly_alternating_with_whorls_of_sporangiophores' / Absent Present, 5 'Position_of_fertile_zones' / 'On_main_stem' 'On_lateral_branches', 6 'Strobilus_with_apical_projection' / Absent Present, 7 'More_than_one_whorl_of_sporangiophores_per_internode_in_differentiated_phytomers' / Absent Present, 8 'Sporangiophore_shield' / Absent Present, 9 'Sporangiophore_shield_development' / 'Partially_covering_sporangia' 'Completely_covering_sporangia' 'Covering_sporangia_and_intersporangial_spaces', 10 'Sporangiophore_disposition_in_fertile_phytomers_with_more_than_one_whorl' / 'Incompletely_covering_internode' 'Completely_covering_internode', 11 'Insertion_angle_of_sporangiophore_stalk' / 'Oblique_basiscopic' 'Perpendicular_to_axis' 'Oblique_acroscopic', 12 'Vascular_trace_departure_of_sporangiophores_and_associated_vegetative_organs_from_stem_or_axis' / 'At_separate_levels' 'As_single_bundle', 13 'Sporangiophore_vascular_trace_path' / Straight Reflexed Downwards, 14 'Secondary_growth_on_peduncle/base_of_reproductive_unit' / Absent Present, 15 'Successive_sporangiophores_shields' / Alternating 'Vertically_aligned ', 16 'Sporangia_number_per_bearing_unit' / One Two Four 'Six_or_more', 17 'Position_of_sporangiophores_in_relation_to_successive_vegetative_organs_in_reduced_fertile_phytomers' / 'Immediately_above_vegetative_organs' 'Lower_region' 'Mid_region' 'Upper_region', 18 'Life_cycle' / Homosporous Heterosporous, 19 'Fertile_appendages_possessing/fused_to_leaf_like_vegetative_units' / Absent Present, 20 'Position_of_the_sterile_units' / 'on_the_cone_axis' 'on_the_surface_of_discs', 21 'Morphology_of_sterile_units _associated_to_fertile_appendages' / 'small_umbo' 'Bulbous_umbo_projections' 'Conical_umbo_projections' 'Bract/leaf-like_umbo_projections' 'Different_from_leaves_on_aerial_stems(=bracts)' 'Identical_to_leaves_on_aerial_stems', 22 'Bract_heel' / Absent Present, 23 'Position_of_bract_fibrous_bundle' / Abaxial Adaxial Central, 24 'Lateral_wing_on_free_part_of_bract' / Absent Present, 25 'Position_of_bracts_at_successive_nodes' / Alternating 'Not_alternating', 26 'Umbo_tip/projection_development' / 'Arising_from_central_disk_umbo' 'Covering_whole_width_of_disk', 27 Exospore / 'Single_layered' 'Double_layered' 'Tri_layered', 28 Perispore / 'Single_layered' 'Double_layered', 29 Elaters / Absent Present, 30 'Elater_internal_organization' / 'Two_Layers' 'Three_layers', 31 'Elater_tip' / Blunt Spatulate, 32 'Pre-release_elater_packing' / 'Flat_coils_on_spore_surface' 'Coiled_around_spore', 33 'Elater_number' / Three Four, 34 'Type_of_aperture' / Trilete 'Oval_to_subcircular' Monolete, 35 Antheridia / Sunken Emergent, 36 'Opercular_cells_on_anthridia' / One Two Four Eight, 37 'Sporangiophore_shield_height' / 0_to_1 1_to_2 2_to_3 3_to_4 4_to_5, 38 'Sporangium_length' / 0_to_1 1_to_2 2_to_3 3_to_4 '>4', 39 'Reproductive_structure_length' / 0_to_20 20_to_40 40_to_60 60_to_80 '> 80', 40 'Reproductive_structure_width' / 0_to_5 5_to_10 10_to_15 15_to_20 '> 20', 41 'Width_of_reproductive_structure_axis ' / 0_to_2.5 2.5_to_5 5_to_7.5 7.5_to_10 '> 10', 42 'Iso/microspore_diameter' / 30_to_40 40_to_50 50_to_60 '> 60' '> 80' ; MATRIX 'Protocalamostachys_arranensis' 011?1-1121100112-00-?-----??0----0???2?004 'Calamocarpon_insignis' 1?111-011-102112210040010-01110000???23011 'Calamostachys_americana' 1?111-011-1011?2110041101-01110000???44?34 'Calamostachys_binneyana' 11111-011-100112200040100-01110000????1001 'Calamostachys_casheana' 1?111-01?-?0011221004010?-??1?0?00????1?01 'Palaeostachya_andrewsi' 1?111-011-201112010040100-?11??000????4104 'Pendulostachys_cingulariformis' 1?111-010-100112301041111-01110000???24123 'Calamostachys_inversibractis' 11111-011-1021?220004101?-01110000???11002 'Palaeostachya_decacnema' 1?111-011-2001121000411?1-01110000???12001 'Mazostachys_pendulata' 1?111-010-10011130004010?-01110000???11003 'Weissistachys_kentuckiensis' 1?111-010-20011100004011?-01110000???22002 'Cruciaetheca_feruglioi' 00111-11101???12-?005-----???????????00??? 'Cruciaetheca_patagonica' 00111-11101???12-?005-----???????????04??? 'Paracalamitina_striata' 00111-11111???12-?005-----???????????????? 'Neocalamites_tubulatus ' ??00(0 1)1-12-?-?00?-?0-------??????????1100?? 'Neocalamites_horridus' ?10011-12-?-?00?-?010-----??????????0110?? 'Equicalastrobus_pusillus sp. nov.'0100?--12-1??00?-?113-?0-0??????????10110? 'Equicalastrobus_chinleana ' 0100?--12-1??003-0113-?0-0??0----0??432431 'Viridistachys_moltenensis' 0100?--12-1??00?-?113-?0-1??????????2?010? 'Viridistachys_gypsensis' 0100?--12-1??00?-?113-?0-1??????????2????? 'Cetistachys_cetensis' 0100?--12-1??00?-?111-?0-0??????????0?000? 'Kraaiostachys_plaatkopensis' 0100?--12-1??002-?112-?0-1??0----0??10110? 'Equisetostachys_calensis' 0100?--12-1-?003-0010-----??????????3114?? 'Equisetostachys_laggensis' 0100?--12-1-?003-0010-----??????????3114?? 'Echinostachys_oblonga' 01001--12-1??003-0111----0200---?0??2?441? 'Echinostachys_tinensis' 0100?--12-1??003-?111----0??????????240??? 'Spaciinodum_collinsonii' 0100??-12-1-0003-00-------??1?11?0??10?000 'Equisetites_arenaceus' ?10010-12-1??003-?0-------???????(0 1)????1??2 'Equisetum_thermale' 01000?-12-1-0003-00-------???????1??0????0 'Equisetum_dimorphum' 010000-12-1???03-?0-------??????????100??? 'Equisetum_laterale' 010000-12-1???03-00-------???????1??0?0??0 'Equisetum_fluviatoides' 010000-12-1-??0?-?0-------??????????0?000? 'Equisetum_hyemale' 010001-12-1-0003-00-------??1?111101100003 'Equisetum_variegatum' 010001-12-1-0003-00-------??1?111101100003 'Equisetum_scirpoides' 010001-12-1-0003-00-------??1?111101000001 'Equisetum_ramosissimum' 01000(0 1)-12-1-0003-00-------101?1111011?0003 'Equisetum_giganteum' 0100(0 1)1-12-1-0003-00-------??1?1111011?0??2 'Equisetum_laevigatum' 01000(0 1)-12-1-0003-00-------??1?111101100003 'Equisetum_myriochaetum' 0100(0 1)(0 1)-12-1-0003-00-------??1?111101101011 'Equisetum_fluviatile' 010000-12-1-0003-00-------??1?111113100??2 'Equisetum_palustre' 010000-12-1-0003-00-------101?111113100001 'Equisetum_diffusum' 010000-12-1-0003-00-------??1?111112101000 'Equisetum_telmateia' 010000-12-1-0003-00-------101?1111(0 1)(1 2)1?3001 'Equisetum_arvense' 010000-12-1-0003-00-------1010111112001002 'Equisetum_sylvaticum' 010000-12-1-0003-00-------??1?111112101012 'Equisetum_pratense' 010000-12-1-0003-00-------??1?11111(2 3)100000 ; END; BEGIN LABELS; TAXAGROUPLABEL Calamitaceae COLOR = (RGB 0.30588235 1 0.13333333) ; TAXAGROUPLABEL Subgenus_Equisetum COLOR = (RGB 1 0.03529412 1) ; TAXAGROUPLABEL Stem_Equisetum COLOR = (RGB 0.03529412 0.22745098 1) ; TAXAGROUPLABEL Archaeocalamitaceae COLOR = (RGB 1 1 0.03529412) ; TAXAGROUPLABEL 'Cruciaetheca-like' COLOR = (RGB 0.03529412 1 0.80784314) ; TAXAGROUPLABEL Sphenophyllales COLOR = (RGB 1 0.41960784 0.03529412) ; TAXAGROUPLABEL Basal COLOR = (RGB 1 0.03529412 0.03529412) ; TAXAGROUPLABEL Fossil_Equisetum COLOR = (RGB 1 0.03529412 0.41960784) ; TAXAGROUPLABEL Subgenus_Hippochaete COLOR = (RGB 0.41960784 0.03529412 1) ; TAXAGROUPLABEL Anatomy_Equisetum COLOR = (RGB 1 0.03529412 0.03529412) ; TAXAGROUPLABEL Subgenus_indet COLOR = (RGB 1 0.41960784 0.03529412) ; TAXAGROUPLABEL Neocalamites COLOR = (RGB 0.62745098 0.06666667 1) ; TAXAGROUPLABEL A.G._Clade COLOR = (RGB 0.4 1 1) ; TAXAGROUPLABEL Outgroups COLOR = (RGB 1 0.06666667 0.06666667) ; TAXAGROUPLABEL 'complex-disc equisetaleans' COLOR = (RGB 0.57254902 0.46666667 1) ; TAXAGROUPLABEL echinostachyaceae COLOR = (RGB 0.2 1 0.67843137) ; TAXAGROUPLABEL 'Equisetum-type cones' COLOR = (RGB 0.84705882 1 0.23529412) ; CHARGROUPLABEL Anatomy_and_Roots COLOR = (RGB 1 0.41176471 0.26666667) ; CHARGROUPLABEL Vegetative_morphology COLOR = (RGB 0.33333333 1 0.16862745) ; CHARGROUPLABEL 'Reproductive(DC)' COLOR = (RGB 1 0.23529412 0.84705882) ; CHARGROUPLABEL Spores_and_gametophytes COLOR = (RGB 1 0.50196078 0.70196078) ; CHARGROUPLABEL Architecture COLOR = (RGB 1 0.06666667 0.06666667) ; CHARGROUPLABEL Stomata_and_micromorphology COLOR = (RGB 0.06666667 0.81176471 1) ; CHARGROUPLABEL 'Reproductive (CC)' COLOR = (RGB 0.2 1 1) ; CHARGROUPLABEL 'Spores (CC)' COLOR = (RGB 0.16862745 1 0.50196078) ; END; BEGIN SETS; TAXPARTITION * UNTITLED = Archaeocalamitaceae : 1, Calamitaceae : 2- 11, A.G._Clade : 12- 14, Neocalamites : 15- 16, 'complex-disc equisetaleans' : 17- 22, 'Equisetum-type cones' : 23- 24, echinostachyaceae : 25- 26, Fossil_Equisetum : 27- 32, Subgenus_Hippochaete : 33- 39, Subgenus_Equisetum : 40- 46; CHARPARTITION * UNTITLED = Architecture : 1, 'Reproductive(DC)' : 2- 26, Spores_and_gametophytes : 27- 36, 'Reproductive (CC)' : 37- 41, 'Spores (CC)' : 42; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1- 42; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1- 42; END; BEGIN NOTES; SU T = 6 C = 1 N = color I = 1; SU T = 6 C = 3 N = color I = 1; SU T = 6 C = 4 N = color I = 1; SU T = 6 C = 5 N = color I = 1; TEXT TAXON = 12 CHARACTER = 5 TEXT = 'Cuneo, N. R. & Escapa, I. H. 2006. The equisetalean genus Cruciaetheca nov. from the Lower Permian of Patagonia, Argentina. International Journal of Plant Sciences, 167, 167?177.^n^nBased on width of main order axes'; TEXT TAXON = 13 CHARACTER = 5 TEXT = 'Cuneo, N. R. & Escapa, I. H. 2006. The equisetalean genus Cruciaetheca nov. from the Lower Permian of Patagonia, Argentina. International Journal of Plant Sciences, 167, 167?177.^n^nBased on width of main order axes'; TEXT TAXON = 14 CHARACTER = 5 TEXT = 'Naugolnykh, S. V. 2002. Paracalamitina striata - A newly reconstructed equisetophyte from the Permian of Angaraland. Journal of Paleontology, 76, 377?385.'; SU T = 6 C = 6 N = color I = 1; SU T = 6 C = 7 N = color I = 1; SU T = 6 C = 8 N = color I = 1; SU T = 6 C = 9 N = color I = 1; SU T = 6 C = 10 N = color I = 1; TEXT TAXON = 5 CHARACTER = 11 TEXT = 'Discussion on Good, C. W. 1975. Pennsylvanian-age calamitean cones elater-bearing spores, and associated vegetative organs. Palaeontographica Abteilung B, 153, 28?99. p45'; SU T = 6 C = 11 N = color I = 1; SU T = 6 C = 12 N = color I = 1; SU T = 6 C = 13 N = color I = 1; SU T = 12 C = 13 N = color I = 8; SU T = 13 C = 13 N = color I = 8; SU T = 14 C = 13 N = color I = 8; SU T = 6 C = 14 N = color I = 1; SU T = 12 C = 14 N = color I = 8; SU T = 13 C = 14 N = color I = 8; SU T = 14 C = 14 N = color I = 8; SU T = 6 C = 15 N = color I = 1; TEXT TAXON = 9 CHARACTER = 15 TEXT = 1; SU T = 6 C = 16 N = color I = 1; SU T = 6 C = 17 N = color I = 1; SU T = 6 C = 18 N = color I = 1; SU T = 12 C = 18 N = color I = 8; SU T = 13 C = 18 N = color I = 8; SU T = 14 C = 18 N = color I = 8; SU T = 6 C = 19 N = color I = 1; SU T = 6 C = 21 N = color I = 1; SU T = 6 C = 22 N = color I = 1; SU T = 6 C = 23 N = color I = 1; SU T = 6 C = 24 N = color I = 1; SU T = 6 C = 25 N = color I = 1; TEXT TAXON = 2 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 3 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 4 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 6 CHARACTER = 27 TEXT = 'Good, C. W. 1975. Pennsylvanian-age calamitean cones elater-bearing spores, and associated vegetative organs. Palaeontographica Abteilung B, 153, 28?99.'; SU T = 6 C = 27 N = color I = 1; TEXT TAXON = 7 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 8 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 9 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 10 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 11 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 36 CHARACTER = 27 TEXT = 'Microspores Evolution and Ontogeny: Evolution and Ontogeny^nedited by S. Blackmore, R. B. Knox'; TEXT TAXON = 43 CHARACTER = 27 TEXT = 'Microspores Evolution and Ontogeny: Evolution and Ontogeny^nedited by S. Blackmore, R. B. Knox p 104'; TEXT TAXON = 44 CHARACTER = 27 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 6 CHARACTER = 28 TEXT = 'Good, C. W. 1975. Pennsylvanian-age calamitean cones elater-bearing spores, and associated vegetative organs. Palaeontographica Abteilung B, 153, 28?99.'; SU T = 6 C = 28 N = color I = 1; TEXT TAXON = 36 CHARACTER = 28 TEXT = 'Microspores Evolution and Ontogeny: Evolution and Ontogeny^nedited by S. Blackmore, R. B. Knox'; TEXT TAXON = 44 CHARACTER = 28 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 6 CHARACTER = 29 TEXT = 'Good, C. W. 1975. Pennsylvanian-age calamitean cones elater-bearing spores, and associated vegetative organs. Palaeontographica Abteilung B, 153, 28?99.'; SU T = 6 C = 29 N = color I = 1; SU T = 12 C = 29 N = color I = 8; SU T = 13 C = 29 N = color I = 8; SU T = 14 C = 29 N = color I = 8; TEXT TAXON = 6 CHARACTER = 30 TEXT = 'Good, C. W. 1975. Pennsylvanian-age calamitean cones elater-bearing spores, and associated vegetative organs. Palaeontographica Abteilung B, 153, 28?99.'; SU T = 6 C = 30 N = color I = 1; TEXT TAXON = 9 CHARACTER = 30 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 44 CHARACTER = 30 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; SU T = 6 C = 31 N = color I = 1; TEXT TAXON = 44 CHARACTER = 31 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; TEXT TAXON = 6 CHARACTER = 32 TEXT = 'Good, C. W. 1975. Pennsylvanian-age calamitean cones elater-bearing spores, and associated vegetative organs. Palaeontographica Abteilung B, 153, 28?99.'; SU T = 6 C = 32 N = color I = 1; TEXT TAXON = 44 CHARACTER = 32 TEXT = 'Kurmann, M. H. & Taylor, T. N. 1984. Comparative ultrastructure of the sphenophyte spores Elaterites and Equisetum. Grana, 23, 109?116.'; SU T = 6 C = 33 N = color I = 1; SU T = 6 C = 34 N = color I = 1; SU T = 12 C = 34 N = color I = 8; SU T = 13 C = 34 N = color I = 8; SU T = 14 C = 34 N = color I = 8; SU T = 6 C = 35 N = color I = 1; TEXT TAXON = 42 CHARACTER = 35 TEXT = 'Hauke, R. L. 1980. Gametophytes of Equisetum diffusum. American Fern Journal, 70, 39?44.'; TEXT TAXON = 43 CHARACTER = 35 TEXT = 'Hauke, R. L. 1978. A Taxonomic Monograph of Equisetum Subgenus Equisetum. Nova Hedwigia, 30, 385?455.'; SU T = 6 C = 36 N = color I = 1; TEXT TAXON = 42 CHARACTER = 36 TEXT = 'Hauke, R. L. 1980. Gametophytes of Equisetum diffusum. American Fern Journal, 70, 39?44.'; TEXT TAXON = 43 CHARACTER = 36 TEXT = 'Hauke, R. L. 1978. A Taxonomic Monograph of Equisetum Subgenus Equisetum. Nova Hedwigia, 30, 385?455.'; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1569929531687; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 2266563227933067323; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8353281940565282356; mqVersion 360; checksumv 0 3 2780436318 null getNumChars 42 numChars 42 getNumTaxa 46 numTaxa 46 short true bits 63 states 63 sumSquaresStatesOnly 16169.0 sumSquares 16169.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1920 961; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #2266563227933067323 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #2266563227933067323; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 211; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1820 889; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #8353281940565282356 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 207; endTell; setExplanationSize 30; setAnnotationSize 60; setFontIncAnnot 0; setFontIncExp 0; setSize 1820 849; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; togglePaleMissing off; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Dark Gray; removeColor on; endTell; getEmployee #mesquite.categ.StateNamesEditor.StateNamesEditor; tell It; makeWindow; tell It; getTable; tell It; rowNamesWidth 399; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1820 889; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.categ.StateNamesEditor.StateNamesWindow.ibeam; endTell; rowsAreCharacters on; toggleConstrainChar on; toggleConstrainCharNum 3; togglePanel off; toggleSummaryPanel off; endTell; showWindow; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; showCharacters #8353281940565282356 #mesquite.lists.CharacterList.CharacterList; tell It; setData 0; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.CharListPartition.CharListPartition; newAssistant #mesquite.parsimony.CharListParsModels.CharListParsModels; getTable; tell It; rowNamesWidth 527; columnWidth 0 109; columnWidth 1 109; endTell; setExplanationSize 30; setAnnotationSize 40; setFontIncAnnot 0; setFontIncExp 0; setSize 1820 869; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.CharacterList.CharacterListWindow.arrow; endTell; endTell; showWindow; getEmployee #mesquite.lists.CharListAnnotPanel.CharListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;