Strain name: 84-112
Filepath: ../polyG/campy.new\319081-577005241.gb
Species: C. fetus
Created: 2018-09-09 12:25:37 (W. Europe Summer Time)
TractNo | Contig | Location | Tract | On length | Gene Group | Offset from gene | Gene | Length | Function | NCTC 11168 | 81-176 | PT14 | 00-0949 | 00-1597 | 00-2425 | 00-2426 | 00-2538 | 00-2544 | 00-6200 | 01-1512 | 269.97 | 4031 | 32488 | 35925B2 | 81116; NCTC 11828 | CG8421 | CJ677CC519 | CJM1cam | F38011 | IA3902 | ICDCCJ07001 | M1 | MTVDSCj20 | NCTC11351 | OD267 | R14 | RM1221 | RM1285 | RM3194 | RM3196 | RM3197 | S3 | WP2202 | YH001 | 15-537360 | BFR-CA-9557 | CVM N29710 | FB1 | HC2-48 | OR12 | RM1875 | RM4661 | RM5611 | YH501 | 13826 | ATCC 33237 | 525.92 | 03-427 | 04/554 | 82-40 | 84-112 | 97/608 | SP3 | cfvi03/293 | pet-3 | ATCC 33236 | ATCC BAA-381 | CCUG 27631 | LMG 9260 | 1485E | 2463D | RM11343 | NCTC 12927 | CCUG 22395 | LMG 11760 | NCTC 11845 | RM2100; ATCC BAA-1060D | RM16701 | RM16712 | Slaughter Beach | LMG 23910 | RM16704 | LMG 24374 | LMG 24377 | RIGS 9880 | LMG 24379 |
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0 | HG004426 | 229971 | G8 | None | 230 | -230 | 230bp upstream of CSG_2380 | 600 | UbiD family decarboxylase associated with menaquinone via futalosine | Cj0546 | CJJ81176_0571 | A911_02660 | PJ16_02710 | PJ17_02645 | N135_00595 | N564_00532 | N565_00580 | N755_00579 | PJ18_02715 | PJ19_02975 | JJD26997_1384 | BN867_05560 | M635_07075 | UC78_0530 | C8J_0507 | CJ8421_02670 | RC25_02655 | CJM1cam_0521 | CJH_02760 | CJSA_0513 | ICDCCJ07001_492 | CJM1_0521 | MTVDSCj20_0563 | ERS445056_00532 | A0W68_02665 | H730_03605 | CJE0650 | CjjRM1285_0517 | AXW77_02660 | CjjRM3196_0523 | CjjRM3197_0523 | CJS3_0536 | A0W69_03580 | QZ67_00556 | N149_0535 | AB430_04230 | G157_05935 | VC76_02845 | AR446_05375 | ATE51_03116 | YSQ_07125 | YSS_02530 | YSU_06135 | A6K30_06000 | CCC13826_1045 | CCON33237_0800 | CCV52592_0770 | CFT03427_0594 | CFF04554_0584 | CFF8240_0591 | CSG_2380 | CFV97608_0637 | CFTSP3_0595 | CFVI03293_0587 | CR44_03025 | CGRAC_1029 | CHAB381_0901 | CHL_1490 | CHH_0523 | CIG1485E_0648 | CIG2463D_0648 | CIG11343_0576 | CINS_0741 | UPTC4110_0786 | CONCH_0780 | UPTC3659_0883 | Cla_0766 | UPTC16701_0780 | UPTC16712_0784 | CD56_04185 | CPEL_0838 | CAQ16704_0774 | CSUB8521_0817 | CSUB8523_0904 | CUREO_0645 | CVOL_0758 |
1 | HG004426 | 524327 | T10 | None | 274 | -59 | 59bp upstream of CSG_5300 | 126 | Putative periplasmic protein | CFT03427_0459 | CFF04554_0448 | CFF8240_0450 | CSG_5300 | CFV97608_0450 | CFTSP3_0459 | CFVI03293_0450 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | HG004426 | 536796 | C10 | 9 | 236 | 0 | CSG_5400 | 995 | putative autotransporter protein | CFF04554_0475 | CFF8240_0465 | CSG_5400 | CFV97608_0520 | CFVI03293_0466 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | HG004426 | 602857 | C9 | 10 | 275 | 0 | CSG_6080 | 130 | hypothetical protein | CSG_6080 | CFV97608_0462 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | HG004426 | 727634 | G9 | None | 276 | -486 | 486bp upstream of CSG_7140 | 297 | hypothetical protein | CFF04554_1105 | CSG_13260 CSG_7140 | CFV97608_1332 CFV97608_0734 | CFTSP3_0689 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | HG004426 | 763471 | G8 | 9 | 263 | 0 | CSG_7650 | 553 | methyl-accepting chemotaxis protein | CFT03427_1196 | CFF04554_1255 | CFF8240_1227 | CSG_7650 | CFV97608_1279 | CFTSP3_1258 | CFVI03293_1224 | CR44_06080 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
6 | HG004426 | 858209 | G9 | 10 | 235 | 0 | CSG_8730 | 418 | hypothetical protein | CFT03427_1099 | CFF04554_1149 | CFF8240_1123 | CSG_8730 | CFV97608_1174 | CFTSP3_1161 | CFVI03293_1119 | CR44_05590 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7 | HG004426 | 932951 | G8 | None | 234 | -4 | 4bp upstream of CSG_9530 | 700 | Methyl-accepting chemotaxis protein | Cj1506c | CJJ81176_1498 | A911_07255 | PJ16_08255 | PJ17_07875 | N135_01597 | N564_01500 | N565_01536 | N755_01538 | PJ18_07650 | PJ19_08250 | JJD26997_1858 | BN867_14750 | M635_03225 | UC78_1438 | C8J_1409 | CJ8421_07535 | RC25_07085 | CJM1cam_1450 | CJH_07885 | CJSA_1428 | ICDCCJ07001_1432 | CJM1_1450 | MTVDSCj20_1471 | ERS445056_01629 | A0W68_07825 | H730_08820 | CJE1679 | CjjRM1285_1500 | AXW77_07460 | CjjRM3196_1506 | CjjRM3197_1506 | CJS3_1585 | A0W69_08660 | QZ67_01635 | G157_01355 | VC76_07445 | YSS_08035 | A6K30_01405 | CFT03427_1021 | CFF04554_1030 | CFF8240_1041 | CSG_9530 | CFV97608_1097 | CFTSP3_1083 | CFVI03293_0998 | CR44_05185 | CINS_0215 | |||||||||||||||||||||||||||||
8 | HG004426 | 1009903 | G9 | 9 | 232 | 0 | CSG_10300 | 446 | hypothetical protein | CFT03427_0951 CFT03427_1578 | CFF04554_0962 CFF04554_1628 | CFF8240_0963 CFF8240_1626 | CSG_17600 CSG_10300 | CFV97608_1022 CFV97608_1753 | CFTSP3_1006 CFTSP3_1642 | CFVI03293_1650 CFVI03293_0793 | CR44_08020 CR44_04830 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9 | HG004426 | 1087064 | G9 | 9 | 231 | 0 | CSG_11100 | 522 | Methyltransferase | CFT03427_0876 | CFF04554_0883 | CFF8240_0879 | CSG_11100 | CFV97608_0943 | CFTSP3_0931 | CFVI03293_0872 | CR44_04455 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10 | HG004426 | 1103790 | G9 | 9 | 259 | 0 | CSG_11240 | 253 | General secretion pathway protein G | CFT03427_0866 | CFF04554_0871 | CFF8240_0865 | CSG_11240 | CFV97608_0930 | CFTSP3_0921 | CFVI03293_0884 | CR44_04400 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11 | HG004426 | 1290445 | G9 | None | 276 | -495 | 495bp upstream of CSG_13260 | 297 | hypothetical protein | CFF04554_1105 | CSG_13260 CSG_7140 | CFV97608_1332 CFV97608_0734 | CFTSP3_0689 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12 | HG004426 | 1327592 | G10 | None | 277 | -98 | 98bp upstream of CSG_13710 | 73 | hypothetical protein | CSG_13710 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13 | HG004426 | 1406657 | AT6 | 5 | 174 | 0 | CSG_14450 | 705 | Ferrous iron transport protein B | Cj1398 | A911_06800 | PJ16_07725 | PJ17_07360 | N135_02245 | N564_02335 | N565_02415 | N755_01432 | PJ18_07145 | PJ19_07720 | BN867_13780 | M635_02665 | UC78_1340 | C8J_1312 | CJ8421_07035 | RC25_06525 | CJM1cam_1355 | CJH_07075 | CJSA_1329 | ICDCCJ07001_1329 | CJM1_1355 | MTVDSCj20_1374 | ERS445056_01514 | A0W68_03685 | CJE1585 | CjjRM1285_1394 | AXW77_06880 | CjjRM3196_1398 | CjjRM3197_1398 | CJS3_1493 | A0W69_08150 | N149_1359 | AB430_08635 | G157_01855 | VC76_06995 | AR446_01250 | YSQ_01880 | YSS_07540 | YSU_01915 | A6K30_01855 | CFT03427_1271 | CFF04554_1323 | CFF8240_1297 | CSG_14450 | CFV97608_1447 | CFTSP3_1334 | CFVI03293_1347 | CR44_06425 | CHAB381_0441 | CHL_1357 | CHH_1316 | CIG1485E_1322 | CIG2463D_1456 | CIG11343_1271 | UPTC4110_0290 | CONCH_0286 | UPTC3659_0304 | Cla_0283 | UPTC16701_0291 | UPTC16712_0293 | CD56_01430 | CPEL_0296 | CAQ16704_0295 | CSUB8521_0303 | CVOL_0281 | ||||||||||||
14 | HG004426 | 1565689 | G9 | 8 | 15 | 0 | CSG_16050 | 425 | hypothetical protein | Cj1295 | A911_06290 | PJ16_07255 | PJ17_06865 | N135_01383 | N564_01313 | N565_02300 | N755_01345 | PJ18_06675 | PJ19_07255 | JJD26997_0427 | BN867_12880 | M635_08875 | UC78_1247 | C8J_1238 | CJ8421_06450 | RC25_06170 | CJM1cam_1277 | CJH_06560 | CJSA_1233 | ICDCCJ07001_1243 | CJM1_1277 | MTVDSCj20_1301 | ERS445056_01406 | A0W68_06980 | H730_07425 | CJE1487 | CjjRM1285_1309 | AXW77_06385 | CjjRM3196_1311 | CjjRM3197_1311 | CJS3_1392 | A0W69_07665 | QZ67_01430 | N149_1256 | AB430_08160 | VC76_06500 | AR446_01680 | ATE51_00974 | YSQ_02385 | YSS_07030 | YSU_02410 | A6K30_02350 | CFT03427_1431 | CFF04554_1483 | CFF8240_1468 | CSG_16050 | CFV97608_1605 | CFTSP3_1495 | CFVI03293_1505 | CR44_07250 | CHL_1692 | CHH_1509 | CIG1485E_0398 | CIG2463D_0403 | CIG11343_0347 | CINS_1263 | UPTC4110_1286 | CONCH_1253 | UPTC3659_1523 | Cla_1300 | UPTC16701_1283 | UPTC16712_1302 | CD56_06695 | CPEL_1409 | CAQ16704_1312 | CSUB8521_1489 | CSUB8523_1585 | CVOL_1279 CVOL_1280 | ||||||||
15 | HG004426 | 1574044 | G8 | 7 | 238 | 0 | CSG_16150 | 179 | transformation system protein | CFT03427_1442 | CFF04554_1493 | CFF8240_1480 CFF8240_1481 | CSG_16150 | CFV97608_1615 | CFTSP3_1506 | CFVI03293_1515 | CR44_07310 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
16 | HG004426 | 1639834 | G9 | 10 | 239 | 0 | CSG_16870 | 129 | hypothetical protein | CFF8240_1551 | CSG_16870 | CR44_07655 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
17 | HG004426 | 1640010 | G9 | 8 | 239 | 0 | CSG_16880 | 321 | hypothetical protein | CFT03427_1510 | CFF04554_1562 | CFF8240_1552 | CSG_16880 | CFV97608_1684 | CFTSP3_1574 | CFVI03293_1574 | CR44_07655 | CHL_0243 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18 | HG004426 | 1641801 | G9 | 9 | 241 | 0 | CSG_16910 | 228 | Possible methyltransferase | CFT03427_1512 | CFF04554_1564 | CFF8240_1555 | CSG_16910 | CFV97608_1688 | CFTSP3_1576 | CFVI03293_1586 | CR44_07670 | CHL_0244 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
19 | HG004426 | 1670906 | G9 | 9 | 242 | 0 | CSG_17230 | 356 | Radical SAM | CFT03427_1545 | CFF04554_1595 | CFF8240_1586 | CSG_17230 | CFV97608_1720 | CFTSP3_1609 | CFVI03293_1617 | CR44_07835 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20 | HG004426 | 1675943 | G9 | 8 | 243 | 0 | CSG_17290 | 238 | hypothetical protein | CFT03427_1551 | CFF04554_1601 | CSG_17290 | CFV97608_1726 | CFTSP3_1615 | CFVI03293_1623 | CR44_07865 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
21 | HG004426 | 1678134 | G8 | 9 | 244 | 0 | CSG_17340 | 423 | D-mycarose 3-C-methyltransferase | CFT03427_1554 | CFF04554_1604 | CFF8240_1599 | CSG_17340 | CFV97608_1729 | CFTSP3_1618 | CFVI03293_1626 | CR44_07880 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
22 | HG004426 | 1680921 | G9 | 9 | 246 | 0 | CSG_17370 | 311 | methionyl-tRNA(fmet) n-formyltransferase | CFT03427_1556 | CFF04554_1606 | CSG_17370 | CFV97608_1731 | CFTSP3_1620 | CFVI03293_1628 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
23 | HG004426 | 1682102 | G9 | 9 | 247 | 0 | CSG_17390 | 327 | Predicted Fe-S oxidoreductase | CFT03427_1558 CFT03427_1552 | CFF04554_1608 CFF04554_1602 | CSG_17390 CSG_17310 | CFV97608_1733 CFV97608_1727 | CFTSP3_1622 CFTSP3_1616 | CFVI03293_1624 CFVI03293_1630 | CR44_07900 CR44_07870 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
24 | HG004426 | 1682996 | G9 | 9 | 248 | 0 | CSG_17400 | 444 | hypothetical protein | CFT03427_1559 | CFF04554_1609 | CFF8240_1606 | CSG_17400 | CFV97608_1734 | CFTSP3_1623 | CFVI03293_1631 | CR44_07905 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
25 | HG004426 | 1686598 | G9 | 8 | 249 | 0 | CSG_17430 | 288 | Probable 3-demethylubiquinone-9 3-methyltransferase | CFT03427_1562 | CFF04554_1612 | CFF8240_1609 | CSG_17430 | CFV97608_1737 | CFTSP3_1626 | CFVI03293_1634 | CR44_07920 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
26 | HG004426 | 1691167 | G9 | 9 | 250 | 0 | CSG_17470 | 484 | hypothetical protein | CFT03427_1565 | CFF04554_1615 | CFF8240_1613 | CSG_17470 | CFV97608_1740 | CFTSP3_1629 | CFVI03293_1637 | CR44_07935 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
27 | HG004426 | 1692772 | G10 | 10 | 251 | 0 | CSG_17480 | 672 | hypothetical protein | CFT03427_1566 | CFF04554_1616 | CFF8240_1624 | CSG_17480 | CFV97608_1741 | CFTSP3_1630 | CFVI03293_1638 | CR44_07940 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
28 | HG004426 | 1700585 | G9 | 9 | 252 | 0 | CSG_17550 | 481 | hypothetical protein | CFT03427_1573 | CFF04554_1623 | CFF8240_1621 | CSG_17550 | CFV97608_1748 | CFTSP3_1637 | CFVI03293_1645 | CR44_07980 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
29 | HG004426 | 1701599 | G9 | 9 | 253 | 0 | CSG_17560 | 465 | hypothetical protein | CFT03427_1574 | CFF04554_1624 | CFF8240_1622 | CSG_17560 | CFV97608_1749 | CFTSP3_1638 | CFVI03293_1646 | CR44_07990 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
30 | HG004426 | 1706278 | G9 | 9 | 254 | 0 | CSG_17590 | 448 | hypothetical protein | CFT03427_1577 | CFF04554_1627 | CSG_17590 | CFV97608_1752 | CFTSP3_1641 | CFVI03293_1649 | CR44_08005 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
31 | HG004426 | 1707073 | G8 | 8 | 232 | 0 | CSG_17600 | 453 | hypothetical protein | CFT03427_0951 CFT03427_1578 | CFF04554_0962 CFF04554_1628 | CFF8240_0963 CFF8240_1626 | CSG_17600 CSG_10300 | CFV97608_1022 CFV97608_1753 | CFTSP3_1006 CFTSP3_1642 | CFVI03293_1650 CFVI03293_0793 | CR44_08020 CR44_04830 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
32 | HG004426 | 1709497 | G9 | 9 | 19 | 0 | CSG_17620 | 253 | Methyltransferase, possibly involved in O-methyl phosphoramidate capsule modification | Cj1420c | CJJ81176_1419 | A911_06906 | PJ16_07835 | N135_02250 | N564_02340 | N565_02420 | N755_02475 | PJ18_07255 | PJ19_07830 | JJD26997_1753 | BN867_06890 | M635_08895 | UC78_1362 | C8J_0641 | CJ8421_07145 | RC25_06635 | CJM1cam_0659 | CJH_07485 | CJSA_1351 | CJM1_0659 | MTVDSCj20_0698 | ERS445056_01536 | A0W68_03575 | H730_08055 | CjjRM1285_1416 | AXW77_06990 | A0W69_08260 | QZ67_01555 | AR446_04835 | YSQ_05930 | YSS_03110 | YSU_05580 | CFT03427_1580 | CFF04554_1630 | CFF8240_1628 | CSG_17620 | CFV97608_1755 | CFTSP3_1645 | CFVI03293_1652 | CR44_08030 | CINS_0302 | CONCH_1266 | UPTC3659_1405 | Cla_0312 | CD56_06730 | CSUB8521_0343 | CSUB8523_0326 | |||||||||||||||||||||||||||||
33 | HG004426 | 1709859 | G9 | 9 | 255 | 0 | CSG_17630 | 258 | Methyltransferase, possibly involved in O-methyl phosphoramidate capsule modification | Cj1419c | CJJ81176_1418 | A911_06905 | PJ16_07830 | N135_01508 | N564_01416 | N565_01456 | N755_01453 | PJ18_07250 | PJ19_07825 | JJD26997_1752 | BN867_06870 | M635_02770 | UC78_1361 | C8J_0640 | CJ8421_07140 | RC25_06630 | CJM1cam_0658 | CJH_07480 | CJSA_1350 | CJM1_0658 | MTVDSCj20_0697 | ERS445056_01535 | A0W68_03580 | H730_08050 | CjjRM1285_1415 | AXW77_06985 | A0W69_08255 | QZ67_01554 | AR446_04840 | YSQ_05935 | YSS_03105 | YSU_05585 | CFT03427_1581 | CFF04554_1631 | CFF8240_1629 | CSG_17630 | CFV97608_1756 | CFTSP3_1646 | CFVI03293_1653 | CR44_08035 | CINS_0303 | CONCH_1265 | UPTC3659_1406 | Cla_0313 | CD56_06725 | CSUB8521_0344 | CSUB8523_0327 | |||||||||||||||||||||||||||||
34 | HG004426 | 1812009 | G10 | 9 | 256 | 0 | CSG_18690 | 459 | hypothetical protein | CFT03427_1684 | CFF04554_1736 | CFF8240_1739 | CSG_18690 | CFV97608_1863 | CFTSP3_1749 | CFVI03293_1760 | CR44_08555 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
35 | HG004426 | 1840742 | G9 | None | 278 | -58 | 58bp upstream of CSG_18950 | 69 | hypothetical protein | CSG_18950 | CFV97608_1887 | CFVI03293_1784 | CHH_0214 |