Gene group 170

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
170hxuAfilamentous hemagglutinin51216
15..60 [0]
N149_1175
AB.._07445
AB.._07440
FB1 [0]
VC76_06080
AR.._02110
AR.._02110
AT.._01138
YSQ_02800
RM4661 [0]
YSS_06610
YSU_02825
A6.._02755
A6.._02755
A6.._02760

Annotated functions

Function#Occuringscore
filamentous hemagglutinin41.14
hemagglutination protein20.33
Heme/hemopexin-binding protein precursor10.29
No data, identified by script30.00
No annotation data20.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
15..60 [0]
AB.._07445
FB1 [0]
AR.._02110
AR.._02110
RM4661 [0]
YSU_02825
A6.._02755
A6.._02755
1
N149_1175
AT.._01138
YSQ_02800

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
15..60 [0]
AB.._07445
FB1 [0]
AR.._02110
AR.._02110
RM4661 [0]
YSU_02825
A6.._02755
A6.._02755
1
N149_1175
AT.._01138
YSQ_02800

15-537360

15-537360 : 15-537360 [0] [tract entry] [top]

Function: No data, identified by script
+0 KKKGGGGMNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDN
+100 TVNFTTNGKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTTPMGIDAINTFSVDDSFSPVFNANKGDVVNMGTIKANEIVL
+200 VGNKVENIKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWK
+300 GFAKLVNEGIFGELKFKDVYLGKDIVVQSILWGLVMVL

[show detailed alignment]

15-537360 : N149_1175 [tract entry] [top]

Function: No annotation data
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTTPMGIDAINTFSVDDSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIVVQSILWGLVMVL

No BLAST hits


BFR-CA-9557

BFR-CA-9557 : AB430_07445 [tract entry] [top]

Function: filamentous hemagglutinin
+0 VNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTTPMGIDAINTFSVDDSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIDFAGASTINPVGFGNGFVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPKYAFSYKYLGGLAGHIENG
+400 TFSNIALDTIEGFNGENSSSGGFAGEINSGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGGFVGYTTGNTTFDGIGLKDIR
+500 FIKSGAFTGGFAGMT

[show detailed alignment]

FB1

FB1 : FB1 [0] [tract entry] [top]

Function: No data, identified by script
+0 FKKKGGGMNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDN
+100 TVNFTTNGKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSITPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVL
+200 VGNKVENIKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWK
+300 GFAKLVNEGIFGELKFKDVYLGKDIDFAGASTINPVGFGNGFVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPKYAFSYKYLGGL
+400 AGHIENGTFSNIALDTIEGFNGENSSSGGFAGEINSGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGGFVGYTTGNTTFDG
+500 IGLKDIRFIKSGAFTGGFAGMT

[show detailed alignment]

HC2-48

HC2-48 : AR446_02110 [tract entry] [top]

Function: hemagglutination protein
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSEILVGEGATINANKFGVSTTPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIVVQSILWGLVMVL

[show detailed alignment]

HC2-48 : AR446_02110 [tract entry] [top]

Function: hemagglutination protein
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSEILVGEGATINANKFGVSTTPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIVVQSILWGLVMVL

[show detailed alignment]

OR12

OR12 : ATE51_01138 [tract entry] [top]

Function: Heme/hemopexin-binding protein precursor
+0 MLKSPDRILCIKKKKGGGMNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIA
+100 WGGGFNIGKDNTVNFTTNGKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSITPMGIDAINTFSVDGSFSPVFNANKGDVVN
+200 MGTIKANEIVLVGNKVENIKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQS
+300 ASNEEMINSWKGFAKLVNEGIFGELKFKDVYLGKDIDFAGASTINPVGFGNGFVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPK
+400 YAFSYKYLGGLAGHIENGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGGFVGYTTGNTTFDGISLKDIRFIKSGAFTGGFA
+500 GMTQGNVIFENIVLNDLEEISGSHAGGFVGGVLNNENGIASLSNIVLNNIESIKGIGFIGGFAGWINNGTFENIALNNIKNISDNNYAGGFTGYAGAGTY
+600 KNIILNNIGEISANGTASLDEKSIYAGGFVGNIENGSNIANSNIYFYGLLNSSSNKNYITHNENILNLSNTTDFQTFINQSKIAGLEYLTNTSTSNSHLH
+700 MINGGKIGNEKFKITFDKDNFTYNTPKISEVDPDGSGSSSSPTAPNEGELSSITLEQSDFEDEILKTIIDEILNEDYVLNIDSIDFNKFNEGDVAILLYL
+800 LKNTSDKKLKESLKQSLEFYTEFNKGGLKTEFEKWYGSDESTYKTSMGKYNYIIESLANLKEYVNTILKPELKSIKNNLNRLEFLKAEIKRLERVYQKAM
+900 QNDLLPYDQLEVVYKNTQEKIDAYYAEAQGLLDILKNKNKPFLDDLITKEYSFEDKYTDIQGTFAIAGSSIDANAIENLADKPILSLPENENSGDSQTTN
+1000 NTDSTDIVNTFSKQVKLTSTESILILPAEETQSHIKEDERERGRVCITSDNAKTNNPCIAITF

[show detailed alignment]

RM1875

RM1875 : YSQ_02800 [tract entry] [top]

Function: filamentous hemagglutinin
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTIPMGIDAINTFSVDDSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIDFAGASTINPVGFGNGFVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPKYAFSYKYLGGLAGHIENG
+400 TFSNIALDTIEGFNSENSSSGGFAGEINSGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGGFVGYTTGNTTFDGIGLKDIR
+500 FIKSGAFTGGFAGMTQGNVIFENIVLNDLEEISGSHAGGFVGGVLNNENGIASLSNIVLNNIESIKGIGFIGGFAGWINDGTFNNIILNNIEKISVSATH
+600 KYIFTGGFTGYAGAGTYKNIILNNIGEISANGTASLDEKSIYAGGFAGRIKSDGINFSNIVLNDIDKISASIAAGGFVGNIENGSNIANSNIYFYGLLNS
+700 SSNKNYITHNENILNLSNTTDFQTFINQSKIAGLEYLTNTSTSNSHLHMINGGKIGNEKSKITFDKDNFTYNTPKISEVDPDGSGSSSSPTAPNEGELSS
+800 ITLEQSDFEDEILKTIIDEILNEDYVLNIDSIDFNKFNEGDVAILLYLLKNTSDKKLKESLKQSLEFYTEFNKGGLKTEFEKWYGSDESTYKTSMGKYNY
+900 IIESLANLKEYVNTTLKPELESIKNNLNRLEFLKAEIKRLERVYQKAMQNDLLPYDQLEVVYKNTQEKIDAYYAEAQGLLDILKNKNKPFLDDLITKEYS
+1000 FEDKYTDIQGTFAIAGSSVDANAIENLADKPILSLPENENSGDSQTTNNIDSTDIVNTFSKQVKLTSTESILILPAEETQSHIKEDERERGRVCITSDNA
+1100 KTNNPCIAITF

[show detailed alignment]

RM4661

RM4661 : RM4661 [0] [tract entry] [top]

Function: No data, identified by script
+0 LKKTGGGMNITNLSNIKHFLNTSLYFTNHLSKSLRVIVNISVIISLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDN
+100 TVNFTTNSKNYLNLDYINKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSTTPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVL
+200 VGNKVENIKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWK
+300 GFAKLVNEGIFGELKFKDVYLSKDIDFAGAGVIDPVGFSNGFVGNFTVVIIRFLIYKLMLLIKLM

[show detailed alignment]

RM5611

RM5611 : YSU_02825 [tract entry] [top]

Function: No annotation data
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSEILVGEGATINANKFGVSTTPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIVVQSILWGLVMVL

[show detailed alignment]

YH501

YH501 : A6K30_02755 [tract entry] [top]

Function: filamentous hemagglutinin
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSITPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIDFAGASTINPVGFGNGFVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPKYAFSYKYLGGLAGHIENG
+400 TFSNIALDTIEGFNGENSSSGGFAGEINSGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGGFVGYTTGNTTFDGIGLKDIR
+500 FIKSGAFTGGFAGMT

[show detailed alignment]

YH501 : A6K30_02755 [tract entry] [top]

Function: filamentous hemagglutinin
+0 MNITNLLNIKHFLNTSSYFTNHLSKSLRVIVNISVITSLVLAQSLTASNLPSGGKFINGTGSIATNGNIMNITGDKTHNVIAWGGGFNIGKDNTVNFTTN
+100 GKNYLNLDYTNKASQILGTLNGGTNNVYIVNPSGVLVGEGATINANKFGVSITPMGIDAINTFSVDGSFSPVFNANKGDVVNMGTIKANEIVLVGNKVEN
+200 IKGTLQADKVDIKGDKVYLEDFGINSTHLKAEIGSEGFFKYEVKDVYDAYKDDSNLVDNYEFTGTATTNGNFKEYLYIGSQSASNEEMINSWKGFAKLVN
+300 EGIFGELKFKDVYLGKDIDFAGASTINPVGFGNGFVGNFYGNNHTLSNIQIDVADKTYVGLFGYIKGGSVQNLTIDGLQFPKYAFSYKYLGGLAGHIENG
+400 TFSNIALDTIEGFNGENSSSGGFAGEINSGTFNNISLKNLGNIGVAKYAGGFAGQINGGDFSSIILSNIESIYGKNNGGGFVGYTTGNTTFDGIGLKDIR
+500 FIKSGAFTGGFAGMT

[show detailed alignment]