Strain name: NCTC 11845
Filepath: ../polyG/campy.new\241831-744816895.gb
Species: C. lari
Created: 2018-09-09 12:25:37 (W. Europe Summer Time)
TractNo | Contig | Location | Tract | On length | Gene Group | Offset from gene | Gene | Length | Function | NCTC 11168 | 81-176 | PT14 | 00-0949 | 00-1597 | 00-2425 | 00-2426 | 00-2538 | 00-2544 | 00-6200 | 01-1512 | 269.97 | 4031 | 32488 | 35925B2 | 81116; NCTC 11828 | CG8421 | CJ677CC519 | CJM1cam | F38011 | IA3902 | ICDCCJ07001 | M1 | MTVDSCj20 | NCTC11351 | OD267 | R14 | RM1221 | RM1285 | RM3194 | RM3196 | RM3197 | S3 | WP2202 | YH001 | 15-537360 | BFR-CA-9557 | CVM N29710 | FB1 | HC2-48 | OR12 | RM1875 | RM4661 | RM5611 | YH501 | 13826 | ATCC 33237 | 525.92 | 03-427 | 04/554 | 82-40 | 84-112 | 97/608 | SP3 | cfvi03/293 | pet-3 | ATCC 33236 | ATCC BAA-381 | CCUG 27631 | LMG 9260 | 1485E | 2463D | RM11343 | NCTC 12927 | CCUG 22395 | LMG 11760 | NCTC 11845 | RM2100; ATCC BAA-1060D | RM16701 | RM16712 | Slaughter Beach | LMG 23910 | RM16704 | LMG 24374 | LMG 24377 | RIGS 9880 | LMG 24379 |
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0 | CP007775 | 45205 | G11 | None | 454 | -32 | 32bp upstream of UPTC3659_0047 | 281 | GTP binding protein | UPTC3659_0047 | CSUB8521_0041 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | CP007775 | 61286 | G10 | None | 455 | -66 | 66bp upstream of UPTC3659_0069 | 2048 | autotransporter domain protein | UPTC3659_0069 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | CP007775 | 61373 | G12 | 12 | 455 | 0 | UPTC3659_0069 | 2048 | autotransporter domain protein | UPTC3659_0069 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | CP007775 | 252239 | G9 | 9 | 456 | 0 | UPTC3659_0279 | 594 | hypothetical protein (DUF2972 domain) | UPTC3659_0279 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | CP007775 | 292588 | A10 | 10 | 457 | 0 | UPTC3659_0318 | 1484 | glycosyltransferase, family 1 | UPTC3659_0318 UPTC3659_0318 | CPEL_0314 CPEL_0314 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | CP007775 | 292617 | A10 | 10 | 458 | 0 | UPTC3659_0318 | 1484 | glycosyltransferase, family 1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
6 | CP007775 | 344775 | AT7 | 6 | 459 | 0 | UPTC3659_0363 | 422 | No annotation data | UPTC3659_0363 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7 | CP007775 | 467020 | C9 | None | -1 | -299 | 299bp upstream of UPTC3659_0483 | 2 | 16S ribosomal RNA | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8 | CP007775 | 498981 | G7 | 7 | 460 | 0 | UPTC3659_0516 | 500 | lysyl-tRNA synthetase | Cj0401 | CJJ81176_0424 | A911_01950 | PJ16_01950 | PJ17_01950 | N135_00445 | N564_00384 | N565_00433 | N755_00433 | PJ18_01950 | PJ19_02215 | JJD26997_1556 | BN867_03740 | M635_06315 | UC78_0387 | C8J_0376 | CJ8421_02010 | RC25_01990 | CJM1cam_0379 | CJH_01995 | CJSA_0374 | ICDCCJ07001_365 | CJM1_0379 | MTVDSCj20_0371 | ERS445056_00395 | A0W68_01940 | H730_02570 | CJE0450 | CjjRM1285_0377 | AXW77_01915 | CjjRM3196_0383 | CjjRM3197_0383 | CJS3_0391 | A0W69_02830 | QZ67_00403 | N149_0398 | AB430_03540 | G157_06635 | VC76_02100 | AR446_06110 | ATE51_03412 | YSQ_07880 | YSS_01780 | YSU_06880 | A6K30_06735 | CCC13826_0225 | CCON33237_1548 | CCV52592_1349 | CFT03427_1120 | CFF04554_1169 | CFF8240_1142 | CSG_8510 | CFV97608_1194 | CFTSP3_1182 | CFVI03293_1139 | CR44_05695 | CGRAC_1854 | CHAB381_1646 | CHL_0653 | CHH_0618 | CIG1485E_1187 | CIG2463D_1278 | CIG11343_1141 | CINS_0554 | UPTC4110_0491 | CONCH_0494 | UPTC3659_0516 | Cla_0488 | UPTC16701_0486 | UPTC16712_0494 | CD56_02430 | CPEL_0590 | CAQ16704_0508 | CSUB8521_0523 | CSUB8523_0509 | CUREO_1401 | CVOL_0573 |
9 | CP007775 | 523334 | G9 | 9 | 443 | 0 | UPTC3659_0546 | 867 | hypothetical protein | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1467 CAQ16704_1182 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10 | CP007775 | 591642 | G9 | 9 | 442 | 0 | UPTC3659_0606 | 711 | autotransporter domain protein | UPTC4110_0579 | CONCH_0577 | UPTC3659_0606 | CSUB8521_0608 | CSUB8523_0595 | CVOL_0507 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11 | CP007775 | 591815 | T13 | None | 442 | -89 | 89bp upstream of UPTC3659_0606 | 711 | autotransporter domain protein | UPTC4110_0579 | CONCH_0577 | UPTC3659_0606 | CSUB8521_0608 | CSUB8523_0595 | CVOL_0507 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12 | CP007775 | 744449 | G9 | 9 | 443 | 0 | UPTC3659_0778 | 867 | hypothetical protein | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1467 CAQ16704_1182 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13 | CP007775 | 768847 | G9 | 9 | 443 | 0 | UPTC3659_0799 | 867 | hypothetical protein | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1467 CAQ16704_1182 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14 | CP007775 | 780807 | A10 | 10 | 461 | 0 | UPTC3659_0805 | 418 | MiaB-like tRNA modifying enzyme | Cj1006c | CJJ81176_1024 | A911_04855 | PJ16_05270 | PJ17_04910 | N135_01041 | N564_00972 | N565_01018 | N755_01011 | PJ18_04975 | PJ19_05535 | JJD26997_0783 | BN867_09940 | M635_00495 | UC78_0962 | C8J_0943 | CJ8421_04990 | RC25_04720 | CJM1cam_0979 | CJH_05040 | CJSA_0949 | ICDCCJ07001_965 | CJM1_0979 | MTVDSCj20_1007 | ERS445056_00993 | A0W68_05265 | H730_05910 | CJE1086 | CjjRM1285_1025 | AXW77_04930 | CjjRM3196_1025 | CjjRM3197_1025 | CJS3_1055 | A0W69_06220 | QZ67_01078 | N149_0939 | AB430_06295 | G157_03960 | VC76_04865 | AR446_03295 | ATE51_01616 | YSQ_04010 | YSS_05425 | YSU_04045 | A6K30_03955 | CCC13826_0085 | CCON33237_0904 | CCV52592_1067 | CFT03427_0853 | CFF04554_0862 | CFF8240_0856 | CSG_11330 | CFV97608_0921 | CFTSP3_0908 | CFVI03293_0893 | CR44_04335 | CGRAC_1007 | CHAB381_1072 | CHL_0911 | CHH_0963 | CIG1485E_0839 | CIG2463D_0838 | CIG11343_0818 | CINS_0678 | UPTC4110_0716 | CONCH_0710 | UPTC3659_0805 | Cla_0698 | UPTC16701_0712 | UPTC16712_0714 | CD56_03840 | CPEL_0767 | CAQ16704_0847 | CSUB8521_0746 | CSUB8523_0834 | CUREO_0761 | CVOL_0692 |
15 | CP007775 | 815837 | G10 | 9 | 462 | 0 | UPTC3659_0845 | 825 | No annotation data | UPTC3659_0845 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
16 | CP007775 | 881555 | G8 | 9 | 8 | 0 | UPTC3659_0914 | 399 | No annotation data | Cj0617 | CJJ81176_0646 | PJ16_03080 | PJ17_02995 | N135_01990 | N564_00606 | N565_00652 | N755_02060 | PJ18_03085 | PJ19_03345 | JJD26997_0407 | CJ8421_03015 | CJH_03130 | CJSA_0585 | ICDCCJ07001_566 | ERS445056_00604 | A0W68_02910 | CJE0720 | CjjRM1285_0590 | AXW77_03025 | CjjRM3196_0596 | CjjRM3197_0596 | CJS3_0607 | A0W69_03955 | QZ67_00633 | N149_0590 | AB430_04500 | AR446_05110 | ATE51_02354 | YSS_02830 | YSU_05855 | CINS_0771 CINS_1271 CINS_0859 | CONCH_0811 CONCH_1260 | UPTC3659_0914 | Cla_1307 Cla_0797 | UPTC16712_0815 | CPEL_0870 | CAQ16704_0743 | CSUB8521_1498 CSUB8521_0845 | CSUB8523_1594 CSUB8523_0932 | CVOL_1289 | ||||||||||||||||||||||||||||||||||||
17 | CP007775 | 1150819 | G9 | 9 | 463 | 0 | UPTC3659_1146 | 1290 | hemagglutinin domain-containing protein | UPTC4110_1147 | CONCH_1474 | UPTC3659_1741 UPTC3659_0800 UPTC3659_0779 UPTC3659_1146 UPTC3659_1381 | Cla_1530 | UPTC16712_1171 UPTC16712_0709 | CD56_06000 | CPEL_1564 CPEL_1036 CPEL_0470 CPEL_1035 | CAQ16704_1466 CAQ16704_1181 CAQ16704_1534 CAQ16704_1535 CAQ16704_1158 CAQ16704_0852 CAQ16704_1287 | CSUB8521_1740 CSUB8521_0660 | CSUB8523_0748 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18 | CP007775 | 1196156 | G9 | None | 444 | -50 | 50bp upstream of UPTC3659_1194 | 71 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
19 | CP007775 | 1202687 | G9 | None | 172 | -50 | 50bp upstream of UPTC3659_1199 | 387 | No annotation data | UPTC3659_1199 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20 | CP007775 | 1370246 | G8 | 8 | 169 | 0 | UPTC3659_1373 | 656 | phosphoglycerol transferase | N149_0993 | AB430_06575 | VC76_05155 | AR446_03010 | ATE51_01498 | YSQ_03705 | YSS_05720 | YSU_03750 | A6K30_03670 | CINS_1119 | CONCH_1111 | UPTC3659_1373 | UPTC16701_1131 | CPEL_1266 | CAQ16704_1150 | CSUB8521_1330 | CSUB8523_1431 | CVOL_1130 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
21 | CP007775 | 1386032 | G9 | 9 | 443 | 0 | UPTC3659_1382 | 867 | hypothetical protein | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1467 CAQ16704_1182 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
22 | CP007775 | 1409899 | G9 | 9 | 19 | 0 | UPTC3659_1405 | 255 | SAM-dependent methyltransferase | Cj1420c | CJJ81176_1419 | A911_06906 | PJ16_07835 | N135_02250 | N564_02340 | N565_02420 | N755_02475 | PJ18_07255 | PJ19_07830 | JJD26997_1753 | BN867_06890 | M635_08895 | UC78_1362 | C8J_0641 | CJ8421_07145 | RC25_06635 | CJM1cam_0659 | CJH_07485 | CJSA_1351 | CJM1_0659 | MTVDSCj20_0698 | ERS445056_01536 | A0W68_03575 | H730_08055 | CjjRM1285_1416 | AXW77_06990 | A0W69_08260 | QZ67_01555 | AR446_04835 | YSQ_05930 | YSS_03110 | YSU_05580 | CFT03427_1580 | CFF04554_1630 | CFF8240_1628 | CSG_17620 | CFV97608_1755 | CFTSP3_1645 | CFVI03293_1652 | CR44_08030 | CINS_0302 | CONCH_1266 | UPTC3659_1405 | Cla_0312 | CD56_06730 | CSUB8521_0343 | CSUB8523_0326 | |||||||||||||||||||||||||||||
23 | CP007775 | 1420016 | G9 | 9 | 464 | 0 | UPTC3659_1415 | 82 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
24 | CP007775 | 1466018 | G9 | 9 | 465 | 0 | UPTC3659_1458 | 789 | phosphoethanolamine transferase | UPTC3659_1458 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
25 | CP007775 | 1511032 | G9 | 9 | 463 | 0 | UPTC3659_1498 | 1134 | hemagglutinin domain-containing protein | CONCH_0687 | UPTC3659_1498 | CPEL_1273 | CAQ16704_1181 CAQ16704_0538 CAQ16704_1535 CAQ16704_0923 CAQ16704_0852 CAQ16704_0012 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
26 | CP007775 | 1548940 | G9 | 9 | 466 | 0 | UPTC3659_1538 | 246 | hypothetical protein | UPTC3659_1538 | CPEL_1430 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
27 | CP007775 | 1713155 | C11 | None | 446 | -141 | 141bp upstream of UPTC3659_1708 | 694 | MCP-domain signal transduction protein | UPTC4110_1471 | CONCH_1442 | UPTC3659_1708 | Cla_1499 | UPTC16701_1466 | UPTC16712_1501 | CD56_07595 | CPEL_1598 | CAQ16704_1501 | CSUB8521_1703 | CSUB8523_1804 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
28 | CP007775 | 1747572 | G9 | 9 | 443 | 0 | UPTC3659_1740 | 867 | hypothetical protein | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_0799 UPTC3659_0546 UPTC3659_1740 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1467 CAQ16704_1182 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 |