Gene group 230

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
230menA1,4-dihydroxy-2-naphthoate octaprenyltransferase0877Cj0546
CJ..6_0571
A911_02660
PJ16_02710
PJ17_02645
N135_00595
N564_00532
N565_00580
N755_00579
PJ18_02715
PJ19_02975
JJ..7_1384
BN.._05560
M635_07075
UC78_0530
C8J_0507
CJ.._02670
RC25_02655
CJ..m_0521
CJH_02760
CJSA_0513
IC..01_492
CJM1_0521
MT..0_0563
ER.._00532
A0.._02665
H730_03605
CJE0650
Cj..5_0517
AX.._02660
Cj..6_0523
Cj..7_0523
CJS3_0536
A0.._03580
QZ67_00556
N149_0535
AB.._04230
G157_05935
VC76_02845
AR.._05375
AT.._03116
YSQ_07125
YSS_02530
YSU_06135
A6.._06000
CC..6_1045
CC..7_0800
CC..2_0770
CF..7_0594
CF..4_0584
CF..0_0591
CSG_2380
CF..8_0637
CF..3_0595
CF..3_0587
CR44_03025
CGRAC_1029
CH..1_0901
CHL_1490
CHH_0523
CI..E_0648
CI..D_0648
CI..3_0576
CINS_0741
UP..0_0786
CONCH_0780
UP..9_0883
Cla_0766
UP..1_0780
UP..2_0784
CD56_04185
CPEL_0838
CA..4_0774
CS..1_0817
CS..3_0904
CUREO_0645
CVOL_0758

Annotated functions

Function#Occuringscore
1,4-dihydroxy-2-naphthoate octaprenyltransferase51.43
UbiD family decarboxylase associated with menaquinone via futalosine10.69
3-polyprenyl-4hydroxybenzoate decarboxylase10.43
3-octaprenyl-4-hydroxybenzoate carboxy-lyase10.29

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_0594
CF..3_0595
CR44_03025
CHH_0523
1
CF..0_0591
CSG_2380
CF..8_0637
CF..3_0587

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_0594
CF..3_0595
CR44_03025
CHH_0523
1
CF..0_0591
CSG_2380
CF..8_0637
CF..3_0587

03-427

03-427 : CFT03427_0594 [tract entry] [top]

Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDDSKALLFRNPTDKNGKKFDPVLTNTFGSFKALNLILKKDSNEIANEIEKLLKPTKPSTLKEK
+100 IDFFTYLLSLKSVFPKHLKTKGASQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGIKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPYDADYVIEGFVDTNRLKDEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAIFVPSNAPRLDDY
+400 ENLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDELLPKFKSVNQNILELKQYFLDTKNPICFVKFNKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSREVIENLIKKGVLERDEELFEKFEIFG

[show detailed alignment]

82-40

82-40 : CFF8240_0591 [tract entry] [top]

Function: 3-polyprenyl-4hydroxybenzoate decarboxylase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDNSKALLFTNPIDKNGKKFDPVLTNIFGSFKALNLIFGKDSNEIANEIEKLLKPTKPSTLKEK
+100 IEFFTYLLSLKSVFPKRLKTKGISQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGLKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPHDSDYVIEGFVDTNRLKNEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAVFVPSSAPHLDDY
+400 ANLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDKLLYKFKSVNQNILELKQYFLDTKSPICFVKFDKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSKEVIENLIKKGLLERDEELFEKFEIFG

[show detailed alignment]

84-112

84-112 : CSG_2380 [tract entry] [top]

Function: UbiD family decarboxylase associated with menaquinone via futalosine
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDNSKALLFTNPIDKNGKKFDPVLTNIFGSFKALNLIFGKDSNEIANEIEKLLKPTKPSTLKEK
+100 IEFFTYLLSLKSVFPKRLKTKGISQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGLKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPHDSDYVIEGFVDTNRLKNEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAVFVPSSAPHLDDY
+400 ANLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDKLLYKFKSVNQNILELKQYFLDTKSPICFVKFDKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSKEVIENLIKKGLLERDEELFEKFEIFG

[show detailed alignment]

97/608

97/608 : CFV97608_0637 [tract entry] [top]

Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDNSKALLFTNPIDKNGKKFDPVLTNIFGSFKALNLIFGKDSNEIANEIEKLLKPTKPSTLKEK
+100 IEFFTYLLSLKSVFPKRLKTKGISQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGLKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPHDSDYVIEGFVDTNRLKNEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAVFVPSSAPHLDDY
+400 ANLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDKLLYKFKSVNQNILELKQYFLDTKSPICFVKFDKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSKEVIENLIKKGLLERDEELFEKFEIFG

[show detailed alignment]

SP3

SP3 : CFTSP3_0595 [tract entry] [top]

Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDDSKALLFRNPTDKNGKKFDPVLTNTFGSFKALNLILKKDSNEIANEIEKLLKPTKPSTLKEK
+100 IDFFTYLLSLKSVFPKRLKTKGASQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGIKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPYDADYVIEGFVDTNRLKDEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAIFVPSNAPRLDDY
+400 ENLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDELLPKFKSVNQNILELKQYFLDTKNPICFVKFNKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSREVIENLIKKGVLERDEELFEKFEIFG

[show detailed alignment]

cfvi03/293

cfvi03/293 : CFVI03293_0587 [tract entry] [top]

Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDNSKALLFTNPIDKNGKKFDPVLTNIFGSFKALNLIFGKDSNEIANEIEKLLKPTKPSTLKEK
+100 IEFFTYLLSLKSVFPKRLKTKGISQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGLKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPHDSDYVIEGFVDTNRLKNEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAVFVPSSAPHLDDY
+400 ANLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDKLLYKFKSVNQNILELKQYFLDTKSPICFVKFDKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSKEVIENLIKKGLLERDEELFEKFEIFG

[show detailed alignment]

pet-3

pet-3 : CR44_03025 [tract entry] [top]

Function: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDDSKALLFRNPTDKNGKKFDPVLTNTFGSFKALNLILKKDSNEIANEIEKLLKPTKPSTLKEK
+100 IDFFTYLLSLKSVFPKHLKTKGASQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKK
+200 AGIKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPYDADYVIEGFVDTNRLKDEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAIFVPSNAPRLDDY
+400 ENLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSSAPNLISDDELLPKFKSVNQNILELKQYFLDTKNPICFVKFNKDRLVKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGWPKETNCSREVIENLIKKGVLERDEELFEKFEIFG

[show detailed alignment]

LMG 9260

LMG 9260 : CHH_0523 [tract entry] [top]

Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
+0 MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKNNSKALLFRNPTDKNGKKFDPVLTNTFGSFKALNLILKKDSNEIASEIEKLLKPTKPSTFKEK
+100 IDFFTYLLSLRSVFPKRLKTKGASQECEFKEPNLYDLPILKTWEEDGGAFVTMGQVYTKDLNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHKYKK
+200 AGIKMPVSVAIGGDPLYIWCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPHDADYVIEGFVDTNRLKDEGKFGDHTGFYTPVEPFPVMEVTKIT
+300 HKKNPIFHATVVGKPPLEDKFMGYATERIFLPLLKTTAPELIDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAVFVPSNAPRLDDY
+400 ENLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASIDNSSSAPNLISDDELLHKFKSVNKNILELKQYFLDTKNPICFVKFDKDRLIKQVF
+500 DELKPFDEHFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRRWPKETNCSREVIENLIKKGVLERDEELFEKFEIFG

[show detailed alignment]