Gene group 176

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
176yjjGhaloacid dehalogenase-like hydrolase domain/phosphoribulokinase domain protein5510PJ18_07280
CJE1606
CJS3_1514
QZ67_01560
G157_01760
VC76_07085
AT.._00730
YSU_01815
CINS_0296
CD56_01560

Annotated functions

Function#Occuringscore
haloacid dehalogenase-like hydrolase domain/phosphoribulokinase domain protein10.60
nucleotide sugar kinase10.50
uridine kinase10.43
haloacid dehalogenase10.43
Pyrimidine 5'-nucleotidase YjjG10.38

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
G157_01760
AT.._00730
YSU_01815
CD56_01560
1
CINS_0296

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
G157_01760
AT.._00730
YSU_01815
CD56_01560
1
CINS_0296

CVM N29710

CVM N29710 : G157_01760 [tract entry] [top]

Function: haloacid dehalogenase-like hydrolase domain/phosphoribulokinase domain protein
+0 MFNLKNIAEKYKLVMVDIDNTLFNYTFAHKNALEAVMDQYDFTLQEYNLAKMMIETRNLSANHHKKELYFKIICENKNIHFSKASEMFNLYTSAFIKNLK
+100 VDKTMSDFLFYVKKLNKKVIAITNFYFIEQIYKLNCANLINMIDYLVCSEEFELEKPNKALVNRALELYGKFIDEEEIVMIGDSIADNFLGGGYRINYYP
+200 YNCSKLLISISGKSGSGKTTLSNAINEIYKSFIISTDGYHKYERHSKIWERVTHYNPKANNLIQLAIDIKHIYQDIGNKLHIPIYDHKNGVIVKSDEIEI
+300 KDLDIVIIEGLHTLYQEVIGDFVKIKIYIDSDEADRQKIDRDSKERNYSHSKIIDTIQKREEDYKKYLEKQKDNANFLILVRDGIFKIYLKDILLNNYLQ
+400 KEYTGRYEDLIQTVKDIFDLILKNRWVKENDA

[show detailed alignment]

OR12

OR12 : ATE51_00730 [tract entry] [top]

Function: Pyrimidine 5'-nucleotidase YjjG
+0 MFNLKNIAEKYKLVMVDIDNTLFNYTFAHKNALEAVMDQYDFTLQEYNLAKMMIETRNLSANHHKKELYFKIICENKNIHFSKASEMFNLYTSAFIKNLK
+100 VDKTMSDFLFYVKKLNKKVIAITNFYFIEQIYKLNCANLINMIDYLVCSEEFELEKPNKALVNRALELYGKFIDEEEIVMIGDSIADNFLGGGGYRINYY
+200 PYNCSKLLISISGKSGSGKTTLSNAINEIYKSFIISTDGYHKYERHSKIWERVTHYNPKANNLIQLAIDIKHIYQDIGNKLHIPIYDHKNGVIVKSDEIE
+300 IKDLDIVIIEGLHTLYQEVIGDFVKIKIYIDSDEADRQKIDRDSKERNYSHSKIIDTIQKREEDYKKYLEKQKDNANFLILVRDGIFKIYLKDILLNNYL
+400 QKEYTGRYEDLIQTVKDIFDLILKNRWVKENDA

[show detailed alignment]

RM5611

RM5611 : YSU_01815 [tract entry] [top]

Function: haloacid dehalogenase
+0 MFNLKNIAEKYKLVMVDIDNTLFNYTFAHKNALEAVMDQYDFTLQEYNLAKMMIETRNLSANHHKKELYFKIICENKNIHFSKASEMFNLYTSAFIKNLK
+100 VDKTMSDFLFYVKKLNKKVIAITNFYFIEQIYKLNCANLINMIDYLVCSEEFELEKPNKALVNRALELYGKFIDEEEIVMIGDSIADNFLGGGYRINYYP
+200 YNCSKLLISISGKSGSGKTTLSNAINEIYKSFIISTDGYHKYERHSKIWERVTHYNPKANNLIQLAIDIKHIYQDIGNKLHIPIYDHKNGVIVKSDEIEI
+300 KDLDIVIIEGLHTLYQEVIGDFVKIKIYIDSDEADRQKIDRDSKERNYSHSKIIDTIQKREEDYKKYLEKQKDNANFLILVRDGIFKIYLKDILLNNYLQ
+400 KEYTGRYEDLIQTVKDIFDLILKNRWVKENDA

[show detailed alignment]

NCTC 12927

NCTC 12927 : CINS_0296 [tract entry] [top]

Function: nucleotide sugar kinase
+0 MFNLNDVAKKYKLIMVDIDNTLFNYTFAHKKALENVMLQFNFSIEDYNHAKKSLDKRNLAANHHKKELYFKIICENKNIHFAKAKEMFELYTFTFIENIK
+100 VDKTMFNFLSYVKKLNKKVIAITNFYFIEQMNKLNRANLTGMIDYLVCSEEFELEKPNKALINRALELYKEPIDDEEIIMIGDSAVDNFLGGGYRINYYP
+200 YNCSKLLISISGKSGSGKTTLSKAIDEIYTSFIISTDGYHKYERNSKIWERITHYNPKANNLIQLAMDIKHIYQDIGNILHIPLYDHTNGVIIKSDKVKV
+300 KDLDIVIIEGLHTLYKEVIGDFVKIKIYIDSDEADSQKINRDSLERNHEKSKIIDTIKKREKDYKDYLEKQKDNANFLVVVRNGKFIIELKDILLNNYLQ
+400 REYNGEYKDLIKTIQDIFTIILQNRWVLN

[show detailed alignment]

Slaughter Beach

Slaughter Beach : CD56_01560 [tract entry] [top]

Function: uridine kinase
+0 MFNLRKIAKNYKLIMVDIDNTLFNYTFAHKNALEATMKQYNFTLEDYDLAKKMIAKRGLSANHHKKELYFKIICENKNIHFSKASEMFELYVSIFTRNLK
+100 VDKTMFEFLCFVKSLNKKVIAITNFYFIEQIHKLNCANLTNMIDYLVCSEEFELEKPNKALIDRALELYGKFIDEEEVVMIGDSIADNFLGGGYRINYYP
+200 YNCSKLLISISGKSGSGKTTLSNAIDEIYKSFIISTDGYHKYERHSKMWERVTHYNPEANNLIQLAMDIKHIYQDIGNKLCIPLYDHKNGVIVKSDEIEI
+300 KDLDIVIIEGLHTLYQEVIGDFVKIKIYIDSDEADKQKINRDSKERNYSHSKIIDTIQKREEDYKKYLEKQKDNANFLIIVRDGIFKIHLRDILLSDYLQ
+400 KEYTGRYEDLIQTVKDIFDLILKNRWMVENDT

[show detailed alignment]