Gene group 234

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
234CFT03427_1021MCP-domain signal transduction protein6848Cj1506c
CJ..6_1498
A911_07255
PJ16_08255
PJ17_07875
N135_01597
N564_01500
N565_01536
N755_01538
PJ18_07650
PJ19_08250
JJ..7_1858
BN.._14750
M635_03225
UC78_1438
C8J_1409
CJ.._07535
RC25_07085
CJ..m_1450
CJH_07885
CJSA_1428
IC..1_1432
CJM1_1450
MT..0_1471
ER.._01629
A0.._07825
H730_08820
CJE1679
Cj..5_1500
AX.._07460
Cj..6_1506
Cj..7_1506
CJS3_1585
A0.._08660
QZ67_01635
G157_01355
VC76_07445
YSS_08035
A6.._01405
CF..7_1021
CF..4_1030
CF..0_1041
CSG_9530
CF..8_1097
CF..3_1083
CF..3_0998
CR44_05185
CINS_0215

Annotated functions

Function#Occuringscore
MCP-domain signal transduction protein51.88
methyl-accepting chemotaxis protein20.71
chemotaxis protein10.50

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1021
CF..3_1083
CR44_05185
1
CF..4_1030
CF..0_1041
CSG_9530
CF..8_1097
CF..3_0998

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1021
CF..3_1083
CR44_05185
1
CF..4_1030
CF..0_1041
CSG_9530
CF..8_1097
CF..3_0998

03-427

03-427 : CFT03427_1021 [tract entry] [top]

Function: MCP-domain signal transduction protein
+0 MMGGGALKNLKLGTKLVLIVGIIITIGIAILSYIVARQTTSNMTKNAEHIITNDAFKYAAKIEGMMNEIIATTQSAHAVIDDFFHRIPSNEIKLENIESI
+100 LSNVFDSSLYADYAMLYLTNPPEQFKGISKYTTESGKFLIVFHDEDTSKRGGIQAVQASDTTTNDSIIKKALIEGKPNDNKVFVGSAEKISFGSDSFIGI
+200 NVALPIFDNSSKKPIGVIAFSLDFKEISNYLLDNKLDSFSGSTKAIISKNGTIAVHDNSNILLKKIQDINPHAKVLSDAVANNEFKIFPDYITSTGVNSY
+300 AVVAPFTTARDSSNWAVITTAPIESVLAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVHMIKIHANDELGAMG
+400 NMINANIAKTRDSLIKDQEAVQQSVETAKEIESGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVT
+500 TNVLGDEIKEMLRSSLSFAKDLAEQSKDLRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTIETTKQAEDIKNIVGVIKDIADQTNLLALNAA
+600 IEAARAGEHGRGFAVVADEVRKLAERTNSSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNAGIANTTNDITQNVNTIADNILAD
+700 VNKKKF

[show detailed alignment]

04/554

04/554 : CFF04554_1030 [tract entry] [top]

Function: MCP-domain signal transduction protein
+0 MMGGGALKNLKLGTKLVLIVGIIITIGIAILSYIVARQTSSNMTKNAEYIITNDAFKYAATIEGMMNEIIATTQSAHAVIDEFFHRVPMNEIKLENIESI
+100 LSNVFDSSLYADYAMLYLTNPPEQFKGINKYTTESGKFLILFRDEDTSKKGGIESMQASDTAINDSILKKALIEGNPNGNRVFVGNVEKISFGSNSFIGI
+200 NVALPIFNNDSKKPIGVIAFSLNFKEISNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKALADAVAKNEFKIFSNYTTSTGVSSY
+300 AVVAPFTTARDSSNWAIVTTAPIDSVFAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVQMIKIHANDELGAMG
+400 NMINANIAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVT
+500 TNVLGDEIKEMLRSSLSFAKDLAEQSKELRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTVETTKQAEDIKNIVGVIKDIADQTNLLALNAA
+600 IEAARAGEHGRGFAVVADEVRKLAERTNNSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNVGIANTTNDITQNVNTIADNILAD
+700 VNKKKF

[show detailed alignment]

82-40

82-40 : CFF8240_1041 [tract entry] [top]

Function: methyl-accepting chemotaxis protein
+0 MILAKFNIWYYAMLNLISLNHKERKMMGGGALKNLKLGTKLVLIVGIIITIGIAILSYIVARQTSSNMTKNAEYIITNDAFKYAATIEGMMNEIIATTQS
+100 AHAVIDDFFHRVPMNEIKLENIESILSNVFDSSLYADYAMLYLTNPPEQFKGINKYTTESGKFLILFHDEDTSKKGGIESMQASDTAINDSILKKALIEG
+200 NPNGNRVFVGNVEKISFGSNSFIGINVALPIFNNDSKKPIGVIAFSLNFKEISNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKA
+300 LADAVAKNEFKIFSNYTTSTGVSSYAVVAPFTTARDSSNWAIVTKAPIDSVFAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFF
+400 KFINHESKEVQMIKIHANDELGAMGNMINANIAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEIN
+500 RVFNSYKSLDFTTNIANAKGEVEVTTNVLGDEIKEMLRSSLSFAKDLAEQSKELRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTVETTKQA
+600 EDIKNIVGVIKDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTNNSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQT
+700 NVGIANTTNDITQNVNTIADNILADVNKKKF

[show detailed alignment]

84-112

84-112 : CSG_9530 [tract entry] [top]

Function: Methyl-accepting chemotaxis protein
+0 LKNLKLGTKLVLIVGIIITIGIAILSYIVARQTSSNMTKNAEYIITNDALKYAATIEGMMNEIIATTQSAHDVINDFFHRVPMNEIKLENIESILSNVFD
+100 SSLHANYAMLYLTNPPEQFKGINKYTTESGKFLILFRDEDTSKKGGIESMQASDTAINDSILKKALIEGNPNGNRVFVGNVEKISFGSNSFIGINVALPI
+200 FNNDSKKPIGVIAFSLNFKEISNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKALADAVAKNEFKIFSNYTTSTGVSSYAVVAPF
+300 TTARDSSNWAIVTTAPIDSVFAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVQMIKIDANDELGAMGNMINAN
+400 IAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVTTNVLGD
+500 EIKEMLRSSLSFAKDLAEQSKELRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTVETTKQAEDIKNIVGVIKDIADQTNLLALNAAIEAARA
+600 GEHGRGFAVVADEVRKLAERTNNSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNVGIANTTNDITQNVNTIADNILADVNKKKF

[show detailed alignment]

97/608

97/608 : CFV97608_1097 [tract entry] [top]

Function: MCP-domain signal transduction protein
+0 MMGGGALKNLKLGTKLVLIVGIIITIGIAILSYIVARQTSSNMTKNAEYIITNDALKYAATIEGMMNEIIATTQSAHDVINDFFHRVPMNEIKLENIESI
+100 LSNVFDSSLHANYAMLYLTNPPEQFKGINKYTTESGKFLILFRDEDTSKKGGIESMQASDTAINDSILKKALIEGNPNGNRVFVGNVEKISFGSNSFIGI
+200 NVALPIFNNDSKKPIGVIAFSLNFKEISNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKALADAVAKNEFKIFSNYTTSTGVSSY
+300 AVVAPFTTARDSSNWAIVTTAPIDSVFAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVQMIKIDANDELGAMG
+400 NMINANIAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVT
+500 TNVLGDEIKEMLRSSLSFAKDLAEQSKELRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTVETTKQAEDIKNIVGVIKDIADQTNLLALNAA
+600 IEAARAGEHGRGFAVVADEVRKLAERTNNSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNVGIANTTNDITQNVNTIADNILAD
+700 VNKKKF

[show detailed alignment]

SP3

SP3 : CFTSP3_1083 [tract entry] [top]

Function: MCP-domain signal transduction protein
+0 MMGGGALKNLKLGTKLVLIVGIIITIGIVILSYIVARQTTSNMTKNAEHIITNDAFKYAAKIEGMMNEIIATTQSAHAVIDDFFHRIPSNEIKLENIESI
+100 LSNVFDSSLYADYAMLYLTNPPEQFKGISKYTTESGKFLIVFHDEDTSKRGGIQAVQASDTTTNDSIIKKALIEGKPNDNKVFVGSAEKISFGSDSFIGI
+200 NVALPIFDNSSKKPIGVIAFSLDFKEISNYLLDNKLDSFSGSTKAIISKNGTIAVHDNSNILLKKIQDINPHAKVLSDAVANNEFKIFPDYITSTGVNSY
+300 AVVAPFTTARDSSNWAVITTAPIESVLAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVHMIKIHANDELGAMG
+400 NMINANIAKTRDSLIKDQEAVQQSVETAKEIESGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVT
+500 TNVLGDEIKEMLRSSLSFAKDLAEQSKDLRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTIETTKQAEDIKNIVGVIKDIADQTNLLALNAA
+600 IEAARAGEHGRGFAVVADEVRKLAERTNSSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNAGIANTTNDITQNVNTIADNILAD
+700 VNKKKF

[show detailed alignment]

cfvi03/293

cfvi03/293 : CFVI03293_0998 [tract entry] [top]

Function: MCP-domain signal transduction protein
+0 MMGGGALKNLKLGTKLVLIVGIIITIGIAILSYIVARQTSSNMTKNAEYIITNDALKYAATIEGMMNEIIATTQSAHDVINDFFHRVPMNEIKLENIESI
+100 LSNVFDSSLHANYAMLYLTNPPEQFKGINKYTTESGKFLILFRDEDTSKKGGIESMQASDTAINDSILKKALIEGNPNGNRVFVGNVEKISFGSNSFIGI
+200 NVALPIFNNDSKKPIGVVAFSLNFKEISNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKALADAVAKNEFKIFSNYTTSTGVSSY
+300 AVVAPFTTARDSSNWAIVTTAPIDSVFAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVQMIKIDANDELGAMG
+400 NMINANIAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVT
+500 TNVLGDEIKEMLRSSLSFAKDLAEQSKELRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTVETTKQAEDIKNIVGVIKDIADQTNLLALNAA
+600 IEAARAGEHGRGFAVVADEVRKLAERTNNSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNVGIANTTNDITQNVNTIADNILAD
+700 VNKKKF

[show detailed alignment]

pet-3

pet-3 : CR44_05185 [tract entry] [top]

Function: chemotaxis protein
+0 LKNLKLGTKLVLIVGIIITIGIAILSYIVARQTTSNMTKNAEHIITNDAFKYAAKIEGMMNEIIATTQSAHAVIDDFFHRIPSNEIKLENIESILSNVFD
+100 SSLYADYAMLYLTNPPEQFKGISKYTTESGKFLIVFHDEDTSKRGGIQAVQASDTTTNDSIIKKALIEGKPNDNKVFVGSAEKISFGSDSFIGINVALPI
+200 FDNSSKKPIGVIAFSLDFKEISNYLLDNKLDSFSGSTKAIISKNGTIAVHDNSNILLKKIQDINPHAKVLSDAVANNEFKIFPDYITSTGVNSYAVVAPF
+300 TTARDSSNWAVITTAPIESVLAPLYSLQKTIFVASLIFLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVHMIKIHANDELGAMGNMINAN
+400 IAKTRDSLIKDQEAVQQSVETAKEIESGNLTARIVKDPANPQLIELKNVLNKMLLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVTTNVLGD
+500 EIKEMLRSSLSFAKDLAEQSKDLRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTIETTKQAEDIKNIVGVIKDIADQTNLLALNAAIEAARA
+600 GEHGRGFAVVADEVRKLAERTNSSLGEIEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNAGIANTTNDITQNVNTIADNILADVNKKKF

[show detailed alignment]