Gene group 18

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
18epsMputative transferase01923
Cj1321
A911_06420
PJ16_07355
PJ17_06995
N135_01409
N564_02230
N565_02320
N755_02380
PJ19_07355
M635_02300
CJ.._06595
A0.._07105
AX.._06505
AX.._06510
A0.._07785
N149_1285
AB.._08270
AT.._00922
AT.._00920
YSS_07175
YSS_07180
A6.._02220
A6.._02215

Annotated functions

Function#Occuringscore
transferase132.50
putative transferase22.50
Putative acetyltransferase EpsM10.29
No annotation data10.00
hypothetical protein20.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
Cj1321
A911_06420
PJ16_07355
PJ17_06995
N135_01409
N564_02230
N565_02320
N755_02380
PJ19_07355
CJ.._06595
A0.._07105
A0.._07785
N149_1285
AB.._08270
1
M635_02300
AX.._06505
AT.._00922
YSS_07175
A6.._02220

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
Cj1321
A911_06420
PJ16_07355
PJ17_06995
N135_01409
N564_02230
N565_02320
N755_02380
PJ19_07355
CJ.._06595
A0.._07105
A0.._07785
N149_1285
AB.._08270
1
M635_02300
AX.._06505
AT.._00922
YSS_07175
A6.._02220

NCTC 11168

NCTC 11168 : Cj1321 [tract entry] [top]

Function: putative transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

PT14

PT14 : A911_06420 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

00-0949

00-0949 : PJ16_07355 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENIFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSADSIISKTTHPINLFFIKI

[show detailed alignment]

00-1597

00-1597 : PJ17_06995 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

00-2425

00-2425 : N135_01409 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

00-2426

00-2426 : N564_02230 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

00-2538

00-2538 : N565_02320 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

00-2544

00-2544 : N755_02380 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

01-1512

01-1512 : PJ19_07355 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENIFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSADSIISKTTHPINLFFIKI

[show detailed alignment]

32488

32488 : M635_02300 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENIFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKTL

[show detailed alignment]

CG8421

CG8421 : CJ8421_06595 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDMQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFATINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

OD267

OD267 : A0W68_07105 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

RM3194

RM3194 : AXW77_06505 [tract entry] [top]

Function: hypothetical protein
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKSL

[show detailed alignment]

WP2202

WP2202 : A0W69_07785 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

15-537360

15-537360 : N149_1285 [tract entry] [top]

Function: Putative transferase
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVQNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

BFR-CA-9557

BFR-CA-9557 : AB430_08270 [tract entry] [top]

Function: transferase
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQRVIVCPFVTINANSNIGDFVLCNIYSSIAHDCKVGEGSILSPYATLNGNSSIGKNCFLATRVSLLPCVNLEDNCIVSR

[show detailed alignment]

OR12

OR12 : ATE51_00922 [tract entry] [top]

Function: Putative acetyltransferase EpsM
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKSCNFITFIHPQSFVSKEAKI
+100 GQGVWCVLL

[show detailed alignment]

RM4661

RM4661 : YSS_07175 [tract entry] [top]

Function: No annotation data
+0 VKNVIIIGAGGFARELYSYLKDANYEIIGYIDIQENIFLT

[show detailed alignment]

YH501

YH501 : A6K30_02220 [tract entry] [top]

Function: hypothetical protein
+0 VKNVIIIGAGGFTRELYSYLKDANYEIIGYIDIQENNFFDLKYLGNEDNFDKKLIQKASFALGVGQINLRKKILVKLSKKIM

[show detailed alignment]