UPTC3659_1498 vs: CONCH_0687 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 3369bp / 1123aa PV: No
Function: hemagglutinin domain-containing proteinScore: 3413.00 bits: 1476.07 e-value: 0.000000
length: 1125 gaps: 13 id: 908 positives: 972 coverage: 0.81 query coverage 0.80
UP..9_1498 +16 LTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQNYLNIAHGTSKSTIEGLL +115
L KLS +I+LS I S+LFS ALPSGGKFTHGTSGSIS G MNI GN NS+IQWGGGFNIGK E VNF G +NYLNIAHGTSKSTIEG+L
CONCH_0687 +654609 LMMKTYKLSNHIILSGITVSMLFSPLMALPSGGKFTHGTSGSISTSGNNMNIMGNGTNSVIQWGGGFNIGKNEQVNFNGSNKNYLNIAHGTSKSTIEGIL +654906
UP..9_1498 +116 NANGKNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKVDIQGGKLGNEKSKTH +215
NA G NVFLINPNGVIITKTGTINANRFVASTSSMSD +M AFAN+K F++GLSFSP+FKPHKAGNVVNMGNIN N+VLLIGNKVDIQGG+LGNEKSKTH
CONCH_0687 +654909 NASGNNVFLINPNGVIITKTGTINANRFVASTSSMSDDNMKAFANLKSFDEGLSFSPVFKPHKAGNVVNMGNINTNDVLLIGNKVDIQGGRLGNEKSKTH +655206
UP..9_1498 +216 LVGNKVFVDFGKSIIQSDYNFISALDKSHVYISSvdyynnvnkynkanfvkGNYLTNAKNIEKFVSIGSDIDWWHFAKGWNENEQFRNTANEYRLINSID +315
LVGN+VFVDFGKSIIQSDYNFISALDKSHVYISSVDYYNNVNKYNKANFVKGNYLTNAKNIEKFVSIGSDI+WWHFAKGWNENEQFRNTANEYRLINSID
CONCH_0687 +655209 LVGNEVFVDFGKSIIQSDYNFISALDKSHVYISSVDYYNNVNKYNKANFVKGNYLTNAKNIEKFVSIGSDIEWWHFAKGWNENEQFRNTANEYRLINSID +655506
UP..9_1498 +316 FGGNQGKNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGLFGSSKGAVFKNINIDYMNGSIKSNGDYNSIAIG +415
FGGNQGKNYANYCIDGLGCTSMIVGNG + LKSFDKSFDGQGYTLKNINID TVLS ++ NVGLFGSSKGAVFKNINIDYMNGSIKSNGDYNSIAIG
CONCH_0687 +655509 FGGNQGKNYANYCIDGLGCTSMIVGNGYDWN-LKSFDKSFDGQGYTLKNINIDTTVLSSNKK-NVGLFGSSKGAVFKNINIDYMNGSIKSNGDYNSIAIG +655806
UP..9_1498 +416 SFVGYGENSKFDkikiyninnieienningnyRHVFVGGFSGQLnrsnvsnieisninKIYGKNIQDsasalvggfvgsvaggsysnikisninsivskT +515
SFVGYGENSKFDKIKIYNINNIEIENNINGNY V VGGFSG LN+SNVSNIEISNINKIYGKNIQ+SASA VGGFVGSV GGSYSNIKISNINSIVSKT
CONCH_0687 +655809 SFVGYGENSKFDKIKIYNINNIEIENNINGNYSDVHVGGFSGWLNQSNVSNIEISNINKIYGKNIQNSASASVGGFVGSVTGGSYSNIKISNINSIVSKT +656106
UP..9_1498 +516 EGGVAIGTGNASKSGGFAGQSYGYDDDYINYKNIIVSNIKNIYSEAKDNQGSFSGGFIGDIAYSESDifsnivvdnisniiaiGGKEGTRGGKMSNSGAG +615
EGGVAIGTGNASKSGGFAG SYG +YINYKNIIVSNIKNIYSEAKDNQGSFSGGFIGDI SE DIFSNIVVDNISNIIAIGGKEGT GGKMSNSGAG
CONCH_0687 +656109 EGGVAIGTGNASKSGGFAGGSYG-SSNYINYKNIIVSNIKNIYSEAKDNQGSFSGGFIGDIYASENDIFSNIVVDNISNIIAIGGKEGTAGGKMSNSGAG +656406
UP..9_1498 +616 GFSGNIGLYYVNDKSKFSDIKINNIELIKSSGMLSSAGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIASGEFGNIVITNIGS +715
GFSGNIG+YY +KSKFSDIKINNIELIKSSGMLSSAGGF ADIHGGIYNNISVSNIKEISSDNNING FGNREASSGGFSGNIASGEFGNIVITNIGS
CONCH_0687 +656409 GFSGNIGMYYFSNKSKFSDIKINNIELIKSSGMLSSAGGFIADIHGGIYNNISVSNIKEISSDNNINGGSFGNREASSGGFSGNIASGEFGNIVITNIGS +656706
UP..9_1498 +716 IFSNTMQNDSYSGIFVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHVYHKAGELGNAVADQNSWGNTLDKINIHTYT +815
IFSNTMQNDSYSGIFVGNIE YSNRNFSNIFIYISDNHNIRSNSTNGQSY+GKFYGNLNGQTTFNNIHVYHKAGELGN VADQNSWGNTLDKINIHTYT
CONCH_0687 +656709 IFSNTMQNDSYSGIFVGNIENQYSNRNFSNIFIYISDNHNIRSNSTNGQSYVGKFYGNLNGQTTFNNIHVYHKAGELGNVVADQNSWGNTLDKINIHTYT +657006
UP..9_1498 +816 NTNSGYTDFENKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDLDKIQGLSESIIQSISFLE +915
NTNSGY DFENKVSAELDKDGLHKDKDGNLVFTKDF+INSPSKPTTDPDVVLESDDVISA DLN+WLDEI+ G YWVDIKDL K+QG+SE I QSI+FLE
CONCH_0687 +657009 NTNSGYADFENKVSAELDKDGLHKDKDGNLVFTKDFDINSPSKPTTDPDVVLESDDVISANDLNKWLDEIYNGTYWVDIKDL-KLQGVSEEIQQSIAFLE +657306
UP..9_1498 +916 ALYGQEGMKEILEKFHNDYKTAYSKYDKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEETLNALKAQVDK +1015
ALYGQ GM++ILEK DYK A K++ F NK ELL FIN +LK LV+++N L+ L Q++L T I YN+YV +N+ A + + LK Q++
CONCH_0687 +657309 ALYGQSGMQDILEKISIDYKKASDKFNTFNKNKTELLLFINTQLKDLVNATNDKLNILLTKQKELDTLIKAYNNYVALINKGLANESDPEFITLKNQINT +657606
UP..9_1498 +1016 LNQISGELATTIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLI-PDLEKVTTNGNENDEYQKISRQIANLQ-KQTPTF-------eyeeeeteeve +1115
L S LA+ I NQ TLK WQDKAS DSNG+F I G F NV L P L+++T G ++ K +L+ +QT +F EE+E +EVE
CONCH_0687 +657609 LMSESDVLASEIGLNQNTLKLWQDKASKDSNGHFKIIGAFANVILNTNPKLDQITEEGGGGEDPNKPELPDNDLEFEQTASFNLIGDETVEEEKEEKEVE +657906
UP..9_1498 +1116 eASLNQKNKACIVSDNFKTMNPCVV +1140
E ++ QKN+ CIVSDNFKTMNPC V
CONCH_0687 +657909 ETAMMQKNRTCIVSDNFKTMNPCAV +657981
UPTC3659_1498 vs: CPEL_1273 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 2733bp / 911aa PV: Yes
Function: hemagglutinin domain-containing proteinScore: 752.00 bits: 328.20 e-value: 0.000000
length: 475 gaps: 80 id: 238 positives: 278 coverage: 0.56 query coverage 0.45
UP..9_1498 +1 MLIFIPRGGESNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQNYL +100
M +F PRGG SNNFDLT S KKL+ +ILLS IVASLLFS +FALPSGGKFTHGTSG+I + G M I GNK NS+IQWGGGFNI KGESVNFGG S+NYL
CPEL_1273 +1304168 MAVFSPRGGGSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYL +1304465
UP..9_1498 +101 NIAHGTSKSTIEGLLNANGKNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKV +200
NIAHGT KSTI G+LNA G NVFLINPNGVIITKTG INANRFVASTSSMS+ DM FANMK F G +FSP+FKP+KAG VVNMGNINAN+VLLIG KV
CPEL_1273 +1303868 NIAHGTNKSTIAGVLNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANMKTFEQGATFSPVFKPQKAGSVVNMGNINANDVLLIGHKV +1304165
UP..9_1498 +201 DIQGGKLGNEKSKTHLVGNKVFVDFGKSIIQSDYNFISALDKSHVYISSvdyynnv---nkynkanfvkGNYLTN--------AKNIEKFVSIG------ +300
DIQGGKLGN SKTHLVGN V++D + + S I K YI N N K NY N + N +K ++IG
CPEL_1273 +1303568 DIQGGKLGNANSKTHLVGNYVYIDADSANLNS---IINVTAKKDGYIQRKMINFANDGYRFGNNVNINKVNYTDNTNVTHNGISSNFKKALTIGNMENEK +1303865
UP..9_1498 +301 -SDIDWWHFAKGWNENEQFRNTANEYRLINSIDFGGNQGKNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGL +400
I+W + KGWNE + +E++L+ I+F N +D +G F+K+ DGQGYTL N+ ID GL
CPEL_1273 +1303268 ANAIEWRYLIKGWNEGLGDTRSIDEFKLVGNINFD--------NKLMDPIGINGAF------------FNKTLDGQGYTLSNLLIDGN--------EGGL +1303565
UP..9_1498 +401 FGSSKGAVFKNINI-----DYMNG--------------------SIKSNGDY-----NSIAIGSFVGYGENSKFD +475
FG + A N+NI DY NG I GD N+I +G F GY S F+
CPEL_1273 +1302968 FGVIQLANIGNLNINTINFDYTNGIPRYIGSMAYRTDNANFYNINISNIGDLLAAGENAIGVGGFAGYITSSNFN +1303190
Score: 1034.00 bits: 449.85 e-value: 0.000000
length: 538 gaps: 53 id: 272 positives: 330 coverage: 0.56 query coverage 0.45
UP..9_1498 +623 LYYVNDKSKFSDIKINNI-ELIKSSGMLSSAGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNI------------ASGEFGNIV +722
+ Y D + F +I I NI +L+ + GGF I +NNIS+ NIK I D A GGF G + A F NI
CPEL_1273 +1302971 MAYRTDNANFYNINISNIGDLLAAGENAIGVGGFAGYITSSNFNNISIKNIKSIKVDSKAEQL----YTAWIGGFGGRVDNYPVGSNDPGGAPNVFKNIT +1303268
UP..9_1498 +723 ITNIGSIFS----NTMQNDSYSGIFVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHVYHKAGELGNAVADQ------ +822
I+ IGSI++ N N G F G + Y+ N++IY + I N Y GK + N+H+YH +L NA ADQ
CPEL_1273 +1302671 ISGIGSIYASVGYNYWSNYVSIGSFAGTL---YTGNYLENVYIYFDKGYTIGQNGFS-SFYFGKL-SPIGRPNALKNVHIYHYENDLANATADQSYENDF +1302968
UP..9_1498 +823 NSWGNTLDKINIHTYTNTN--SGYTDFENKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDL +922
N G +KINIHTYT+ S Y DF K K + P KP+ D DV+L SDDVISA DLN+WL EI +G YW+DIKD
CPEL_1273 +1302371 NQNGYIQNKINIHTYTDETQESVYKDFLSKADT----------------IEKPTTPDNPNKPS-DSDVILASDDVISANDLNKWLGEILSGKYWIDIKDF +1302668
UP..9_1498 +923 DKIQGLSESIIQSISFLEALYGQEGMKEILEKFHNDYKTAYSKYDKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNEN +1022
KIQGLSE + QSISFLEALYGQ+GMKEILE +YK Y K+++F NKA LLAFINDKLKPLVDSSN AL QLK IQEQLK AI KYNDYVKK+NEN
CPEL_1273 +1302071 -KIQGLSEELKQSISFLEALYGQKGMKEILEGISQEYKNTYVKFNQFAINKANLLAFINDKLKPLVDSSNNALAQLKTIQEQLKIAITKYNDYVKKINEN +1302368
UP..9_1498 +1023 PAIKNEETLNALKAQVDKLNQISGELATTIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLIPDLEKV-TTNGNENDEYQKISRQIANLQKQTPTFe +1122
P+IKNE TL +LKA+VD+L +SGELATTIA NQI L+ WQ +ASD SN QF I G+FDN+AL IP+LEK+ + G END+YQK+SRQIA QKQTPTF+
CPEL_1273 +1301771 PSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFK +1302068
UP..9_1498 +1123 yeeeeteeveeASLNQKNKACIVSDNFKTMNPCVVGSF +1160
YEEEET+E++EA+L Q+ + CIVSDNFKTMNPCVVGS+
CPEL_1273 +1301471 YEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVVGSY +1301582
UPTC3659_1498 vs: CAQ16704_1181 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3141bp / 1047aa PV: No
Function: hemagglutination domain proteinScore: 860.00 bits: 374.79 e-value: 0.000000
length: 430 gaps: 42 id: 233 positives: 284 coverage: 0.58 query coverage 0.54
UP..9_1498 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQNYLNIAHGTSKSTIEGLLNANG +119
KL+ +I+LS I SLLFS ALPSGGKFTHGT+GSI ING MNI G K S+IQWGGGF I +GESVNFGG +NYLNIAHGTSKSTI GLLNANG
CA..4_1181 +1152503 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGSININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSNKNYLNIAHGTSKSTIAGLLNANG +1152800
UP..9_1498 +120 KNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKVDIQGGKLGNEKSKTHLVGN +219
NVFLINPNGVIITKTGTINANRFV STSS+ + D T F N+ + + +FSP+FKP K GNVVNMGNINA+ VLLIGNKVDIQGGKLGN S THLVGN
CA..4_1181 +1152203 NNVFLINPNGVIITKTGTINANRFVVSTSSLNNADYTTFKNLT-YENAHTFSPVFKPNKLGNVVNMGNINADKVLLIGNKVDIQGGKLGNVNSTTHLVGN +1152500
UP..9_1498 +220 KVFVDFGKSIIQSDYNFISALDKSHVYISSvdyyn--------nvnkynkanfvkGNYLTNAKNIEKFVSIG-------SDIDWWHFAKGWNENEQFRNT +319
V++D + + S N ++A+ ++ + N + G + N +K ++IG +W +FAKGWNE +
CA..4_1181 +1151903 NVYIDADSANLNSTIN-VTAIQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFYFAKGWNEYIGDTQS +1152200
UP..9_1498 +320 ANEYRLINSIDFGGNQG--------KNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGLFGSSKGAVFKNINI +419
+E+RL+ +DF GN+G +NYANYC++GLGCTSMIV SF K+FDGQGYTLKNINID T LS ++ NVG+FGS+ A KNIN+
CA..4_1181 +1151603 VDEFRLVGNVDFSGNKGQGVEGRDWQNYANYCLNGLGCTSMIV---------TSFAKTFDGQGYTLKNINIDTTSLS-NKPDNVGIFGSTNNATIKNINV +1151900
UP..9_1498 +420 DYMNGSIKSN-GDYNSIAIGSFVG--YGEN +449
DYM G I++N G+Y +G F G YG N
CA..4_1181 +1151303 DYMGGGIRANGGNY----VGGFAGQIYGSN +1151390
Score: 1131.00 bits: 491.69 e-value: 0.000000
length: 613 gaps: 50 id: 312 positives: 376 coverage: 0.58 query coverage 0.54
UP..9_1498 +529 SGGFAGQSYGYDDDYINYKNIIVSNIKNIYSEAKDNQGSFSGGFIGDIAYSESDifsnivvdnisniiaiGGKEGTRGGKMSNSGAGGFSGNIGLYYVND +628
+GGFAG++ D Y NI + NI NI S + G F+GGF G +D + G T G N GGF+G
CA..4_1181 +1151081 AGGFAGRT-----DSGTYTNISLNNIGNISSNSSGLDGDFAGGFAGQ----ATDGTFSNISLSNI------GNISTSGANWNNY-VGGFAGQA------- +1151378
UP..9_1498 +629 KSKFSDIKINNIELIKSSGMLSSAGGFTADIHGGIYNNISVSNIKEISSDNNINGD-PFGNREASSGGFSGNIASGEFGNIVITNIGSIFSNTMQNDSY- +728
FS+I +NNI I S G S G A GG + NIS+ NI +ISS G+ FG +A GGF+G ASG F NI + NIG I + + N Y
CA..4_1181 +1150781 SGTFSNISLNNIGNISSRGNDISFAGGFAGDAGGTFSNISLNNIGDISSSGGNGGNGEFGRSQA--GGFAGE-ASGTFTNISLNNIGNISTSSRGNGNYI +1151078
UP..9_1498 +729 -SGIFVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGN--LNGQTTFNNIHVYHKAGELGNAVADQNSWGNTLDKINIHTYTNTNSGYTD +828
+G F G +S + F NI+++ N I + N Y GKF+G G T +NIH+YH +L NA DQN WGNT DKI IHTYT+ N Y
CA..4_1181 +1150481 YAGGFAGEADS---DSIFKNIYVFFNPNMSISASGGN-YNYAGKFFGKGYFTG-TNPDNIHIYHHTNDLTNATYDQNYWGNTNDKIQIHTYTDKNQAYNQ +1150778
UP..9_1498 +829 FENKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTT--DPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDLDKIQGLSESIIQSISFLEALYGQE +928
F+ + + I PS P+T +PDV+L SDDVISA DLN WL EI AGNYW+DI DL I+G+SE + QSISFLEALYGQE
CA..4_1181 +1150181 FKQQDNTIARP------------IVQLPSITPPSNPSTPTNPDVILGSDDVISANDLNTWLGEILAGNYWIDINDLSSIKGISEELKQSISFLEALYGQE +1150478
UP..9_1498 +929 GMKEILEKFHNDYKTAYSKYDKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEETLNALKAQVDKLNQISG +1028
GMKEILE F NDYKT Y Y +F TNKA LLAFINDKLKPLV SNKA LK QEQLKTAIAKYNDYVKKVNENP++KN+ TLN+LKA+VD+LN +S
CA..4_1181 +1149881 GMKEILEGFGNDYKTNYRNYQRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSK +1150178
UP..9_1498 +1029 ELATTIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLIPDLEKVTTNGNENDEYQKISRQIANLQKQTPTFeyeeeeteeveeASLNQKNKACIVSD +1128
EL +I NQ L+ WQ K S DSN +F IKG+F N+ALL P+L++V NGNEN++Y+K+SRQ+AN QKQTPTFEYEE E EEVEE +L QK K CIVSD
CA..4_1181 +1149581 ELFASINDNQELLQTWQSKTSTDSNNHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSD +1149878
UP..9_1498 +1129 NFKTMNPCVVGSF +1141
NFKTMNPCV GSF
CA..4_1181 +1149281 NFKTMNPCVTGSF +1149317
Score: 128.00 bits: 59.03 e-value: 0.000000
length: 184 gaps: 20 id: 65 positives: 85 coverage: 0.58 query coverage 0.54
UP..9_1498 +606 GGKMSNSG--AGGFSGNIGLYYVNDKSKFSDIKINNIELIKSSGMLSS--AGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIA +705
GG +N G GGF+G I S+I +NNI I + G AGGF G + NIS+ NI ISS + D +GGF+G
CA..4_1181 +1151327 GGIRANGGNYVGGFAGQI----YGSNLAISNISLNNIGSISTIGNDNGGLAGGFAGRADSGTFSNISLNNIGSISSRGVYDHDFI-----IAGGFAGRTD +1151624
UP..9_1498 +706 SGEFGNIVITNIGSIFSNTMQNDSYSGIFVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHV +789
SG + NI + NIG I SN+ D G F G ++ FSN I +S+ NI + N Y+G F G G TF NI +
CA..4_1181 +1151027 SGTYTNISLNNIGNISSNSSGLD---GDFAGGFAGQATDGTFSN--ISLSNIGNISTSGANWNNYVGGFAGQASG--TFSNISL +1151276
UPTC3659_1498 vs: CAQ16704_0538 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2913bp / 971aa PV: No
Function: hemagglutination domain proteinScore: 900.00 bits: 392.05 e-value: 0.000000
length: 424 gaps: 31 id: 240 positives: 286 coverage: 0.54 query coverage 0.46
UP..9_1498 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQNYLNIAHGTSKSTIEGLLNANG +119
KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I +GESVNFGG +NYLNIAHGTSKSTI GLLNANG
CA..4_0538 +508742 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSNKNYLNIAHGTSKSTIAGLLNANG +509039
UP..9_1498 +120 KNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKVDIQGGKLGNEKSKTHLVGN +219
NVFLINPNGVIITKTGTINANRFVASTSSM M FANM NFNDGLSFSP+FKP KAGNVVNMGNINA+ VLLIGNKVDIQGGKLGN S THLVGN
CA..4_0538 +509042 NNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPSKAGNVVNMGNINADKVLLIGNKVDIQGGKLGN--STTHLVGN +509339
UP..9_1498 +220 KVFVDFGKSIIQSDYNFISALDKSHVYISSvdyy--------nnvnkynkanfvkGNYLTNAKNIEKFVSIG-------SDIDWWHFAKGWNENEQFRNT +319
V++D + + S N ++A+ ++ + N + G + N +K ++IG +W +FAKGWNE++ +
CA..4_0538 +509342 NVYIDADSANLNSTIN-VTAIQGGYIQRQMNKFANDGYNFGNNTNIQNTNYTETNGQTHIGSNNFKKALTIGNMENEKANATEWFYFAKGWNEDKGYTRN +509639
UP..9_1498 +320 ANEYRLINSIDFGGNQG--------KNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGLFGSSKGAVFKNINI +419
+E+RL+ +DF GN+G +NYANYC+ CT MIVG +N Y F+K+FDGQGYTLKNINID T LS ++ VG+FG GA FKNIN+
CA..4_0538 +509642 VDEFRLVGNVDFSGNKGQGVEGRDWQNYANYCLSAGNCTNMIVGHNENF-YYGGFNKTFDGQGYTLKNINIDTTSLS-NKPRYVGIFGGVLGATFKNINV +509939
UP..9_1498 +420 DYMNGSIKSNGDYNSIAIGSFVGY +443
DYM G IK+N N +G FVGY
CA..4_0538 +509942 DYMGGGIKTN---NYGHVGGFVGY +510011
Score: 1115.00 bits: 484.79 e-value: 0.000000
length: 529 gaps: 34 id: 284 positives: 343 coverage: 0.54 query coverage 0.46
UP..9_1498 +610 SNSGAGGFSGNIGLYYVNDKSKFSDIKINNIELIKSSGMLSS-AGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIASGEFGNI +709
S S GGF IG Y +S ++I +NNI I S + S AGGFT + NIS+ NI ISS N + G + +GGF+G S F NI
CA..4_0538 +510149 SSSFVGGF---IGYVY---ESTLTNISLNNIGDISSNSVGGSYAGGFTGYAVAATFSNISLNNIGNISSSNSVGG-------SYAGGFTGHAESATFSNI +510446
UP..9_1498 +710 VITNIGSIFSNTMQNDSYSGIFVGNIES-PYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHVYHKAGELGNAVADQNSWGNTLD +809
+ NIG I S S++G F G I + S F NI+I+ N N+ ++ Y GKF+G + T +NIH+YH +L NA DQN WG + D
CA..4_0538 +510449 SLNNIGNI-SSVNDSGSFAGGFAGYIYTFGTSSLTFKNIYIFF--NPNMSISASGNYIYAGKFFGKGDFTGTLDNIHIYHHTNDLANATYDQNYWGSSND +510746
UP..9_1498 +810 KINIHTYTNTN--SGYTDFENKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDLDKIQGLSE +909
KI IHTY N+N S Y DF KV + S T+PDV+L SDDVISA DLN WL EI AGNYW+DI DL I+G+SE
CA..4_0538 +510749 KIQIHTYNNSNQESFYQDFLSKVNT--------------ISRPTPPTNPSTPSNPTNPDVILGSDDVISANDLNTWLREILAGNYWIDINDLSSIKGISE +511046
UP..9_1498 +910 SIIQSISFLEALYGQEGMKEILEKFHNDYKTAYSKYDKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEET +1009
+ QSISFLEALYGQEGMKEILE F NDYKT Y Y +F TNKA LLAFINDKLKPLV SNKA LK QEQLKTAIAKYNDYVKKVNENP++KN+ T
CA..4_0538 +511049 ELKQSISFLEALYGQEGMKEILEGFGNDYKTNYRNYQRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDAT +511346
UP..9_1498 +1010 LNALKAQVDKLNQISGELATTIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLIPDLEKVTTNGNENDEYQKISRQIANLQKQTPTFeyeeeeteev +1109
LN+LKA+VD+LN +S EL +I NQ+ L+ WQ+K S+DSN +F I G+F N+ALL P+L++V NGNEN++Y+K+SRQ+AN QKQTPTFEYEE E EEV
CA..4_0538 +511349 LNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKIIGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEV +511646
UP..9_1498 +1110 eeASLNQKNKACIVSDNFKTMNPCVVGSF +1138
EE +L QK K CIVSDNFKTMNPCV GSF
CA..4_0538 +511649 EETALMQKGKICIVSDNFKTMNPCVTGSF +511733
UPTC3659_1498 vs: CAQ16704_1535 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3009bp / 1003aa PV: No
Function: hemagglutination domain proteinScore: 920.00 bits: 400.67 e-value: 0.000000
length: 434 gaps: 40 id: 252 positives: 298 coverage: 0.53 query coverage 0.47
UP..9_1498 +15 DLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQNYLNIAHGTSKSTIEGL +114
++T KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I +GESVNFGG +NYLNIAHGTSKSTI GL
CA..4_1535 +1511338 NVTMKTTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSNKNYLNIAHGTSKSTIAGL +1511635
UP..9_1498 +115 LNANGKNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKVDIQGGKLGNEKSKT +214
LNANG NVFLINPNGVIITKTGTINANRFVASTSSM + M FANM NFNDGLSFSP+FKP K GNVVNMGNINAN VLLIGNKV +Q N K KT
CA..4_1535 +1511638 LNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDNTTMQNFANMNNFNDGLSFSPVFKPNKLGNVVNMGNINANKVLLIGNKVLLQSSF--NTKNKT +1511935
UP..9_1498 +215 ---------HLVGNKVFVDFGKSIIQSDYNFISALDKSHVYISSvdyynnvnkynkanfvkGNYL-------TNAKNIEKFVSIGSDIDWWHFAKGWNEN +314
HLVGN++ D ++ + +I+A DK +Y+ + YY N + N + TN N+ ++V IGSD+DWWHFAKGWNEN
CA..4_1535 +1511938 FNQIKASNIHLVGNEIHADIA-TLKDINKLYITAKDKGSLYLNATGYYYNPSSFSHFNNYESKAYNGINHNNTNFSNM-RYVGIGSDVDWWHFAKGWNEN +1512235
UP..9_1498 +315 EQ-FRNTANEYRLINSIDFGGNQG--------KNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGLFGSSKGA +414
+ FR +A EY+L N IDF GN+G +NYANYC+ CTSMIVG + +F+K+FDGQGYTLKNINID T LS ++ VG+FGS GA
CA..4_1535 +1512238 KAGFRTSASEYKLTNDIDFKGNKGQGVEGRDWQNYANYCLSTYNCTSMIVG------FSNAFNKTFDGQGYTLKNINIDITSLS-NKPEYVGIFGSIYGA +1512535
UP..9_1498 +415 VFKNINIDYMNGSIKSN--GDYNSIAIGSFVGYG +448
FKNIN+DYM G IK+N GDY +G FVG+
CA..4_1535 +1512538 TFKNINVDYMGGGIKANDVGDY--FRVGGFVGWA +1512637
Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 509 gaps: 36 id: 281 positives: 334 coverage: 0.53 query coverage 0.47
UP..9_1498 +632 FSDIKINNIELIKSSGML--SSAGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIASGEFGNIVITNIGSIFSNTMQNDSYSGI +731
+S+I +NNI I +SG S AGGF A + G + NIS+ NI ISS G + +A GGF+GN G F NI + NIG I + N +
CA..4_1535 +1512916 YSNISLNNIGNISASGGYNDSQAGGF-AGVVLGTFSNISLNNIGNISSSG---GSRYTRSQA--GGFAGNAGYGTFSNISLNNIGNISASVDNNFVSAAG +1513213
UP..9_1498 +732 FVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQT--TFNNIHVYHKAGELGNAVADQNSWGNTLDKINIHTYTNTNSG--YTDFE +831
F G I N F NI+I+ N I S S N Q YIGKF+G +NG TF+N+H+YH +L NA DQN WG + DKI IHTY N+N Y DF
CA..4_1535 +1513216 FAGIITV---NSTFKNIYIFFNPNMSI-SASGNWQNYIGKFFGYINGSPNLTFDNVHIYHHTNDLANATYDQNYWGSSNDKIQIHTYNNSNQENVYQDFL +1513513
UP..9_1498 +832 NKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDLDKIQGLSESIIQSISFLEALYGQEGMKE +931
K +P ++PDV+L SDDVISA DLN WL EI AGNYW+DI DL I+G+SE + QSISFLEALYGQEGMKE
CA..4_1535 +1513516 SKANT--------------------ISRPTPPTNPSNPDVILGSDDVISANDLNTWLGEILAGNYWIDINDLSSIKGISEELKQSISFLEALYGQEGMKE +1513813
UP..9_1498 +932 ILEKFHNDYKTAYSKYDKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEETLNALKAQVDKLNQISGELAT +1031
ILE F NDYK Y Y +F TNKA LLAFINDKLKPLV SNKA LK QEQLKTAIAKYNDYVKKVNENP++KN+ TLN+LKA+VD+LN +S EL
CA..4_1535 +1513816 ILEGFSNDYKINYRNYQRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFA +1514113
UP..9_1498 +1032 TIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLIPDLEKVTTNGNENDEYQKISRQIANLQKQTPTFeyeeeeteeveeASLNQKNKACIVSDNFKT +1131
+I NQ L+ WQ K S DSN +F IKG+F N+ALL P+L++V NGNEN++Y+K+SRQ+AN QKQTPTFEYEE E EEVEE +L QK K CIVSDNFKT
CA..4_1535 +1514116 SINDNQELLQTWQSKTSTDSNNHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKT +1514413
UP..9_1498 +1132 MNPCVVGSF +1140
MNPCV GSF
CA..4_1535 +1514416 MNPCVTGSF +1514440
UPTC3659_1498 vs: CAQ16704_0923 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2625bp / 875aa PV: Yes
Function: hemagglutination domain proteinScore: 964.00 bits: 419.65 e-value: 0.000000
length: 440 gaps: 31 id: 260 positives: 307 coverage: 0.60 query coverage 0.46
UP..9_1498 +1 MLIFIPRGGE---SNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQ +100
ML RGG SNN DLTSS KKLSKQILLSNIVASLLFSS+FALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I +GESVNF G +
CA..4_0923 +894680 MLKLSSRGGVCWGSNNLDLTSSYKKLSKQILLSNIVASLLFSSTFALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFNGSNK +894977
UP..9_1498 +101 NYLNIAHGTSKSTIEGLLNANGKNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIG +200
NYLNIAHGTSKSTI GLLNANG NVFLINPNGVIITKTGTINANRFVASTSS+ + D T F N+ + + +FSP+FKP K GNVVNMGNI ANNVLLIG
CA..4_0923 +894980 NYLNIAHGTSKSTIAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNNADYTTFKNLT-YENAHTFSPVFKPNKLGNVVNMGNIKANNVLLIG +895277
UP..9_1498 +201 NKVDIQGGKLGNEKSKTHLVGNKVFVDFGKSIIQSDYNFISALDKSHVYIS-SvdyynnvnkynkanfvkGNYLTNAK--------NIEKFVSIG----- +300
NKVDIQGGKLGN S THLVGN V++D + + S N ++A+ ++ +N N N N K NY A N +K ++IG
CA..4_0923 +895280 NKVDIQGGKLGNANSTTHLVGNNVYIDADSANLNSTIN-VTAIQNGYIQRQMNKFANDNYNFTNNVNINKVNYTDSANTTHNGISSNFKKVLTIGNMENE +895577
UP..9_1498 +301 --SDIDWWHFAKGWNENEQFRNTANEYRLINSIDFGGNQGKNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVG +400
+W +FAKGWNE + + +E+RL+ +DF GNQG+NYANYCIDGLGCTSMIVG + +FDK+FDGQGYTLKNINID + L ++ VG
CA..4_0923 +895580 KANATEWFYFAKGWNESIGYTQSVDEFRLVGNVDFSGNQGQNYANYCIDGLGCTSMIVG------FSNTFDKTFDGQGYTLKNINIDTSSLN-NKPYFVG +895877
UP..9_1498 +401 LFGSSKGAVFKNINIDYMNGSIKSNGDYNSIAIGSFVGYG +440
+FGS+ A FKNIN+DYM G IK+ + +G F GY
CA..4_0923 +895880 IFGSTNNATFKNINVDYMGGGIKTT---DGARVGGFAGYA +895997
Score: 1003.00 bits: 436.48 e-value: 0.000000
length: 493 gaps: 45 id: 261 positives: 316 coverage: 0.60 query coverage 0.46
UP..9_1498 +650 SSAGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIASGEFGNIVITNIGSIFSNTMQNDSYSGIFVGNIESPYSNRNFSNIFIY +749
+ GGF A G + NIS+ NI IS G ++ +GGF+G A G F NI + NIG I S + D+ +G F G I S S F NI+I+
CA..4_0923 +895934 ARVGGF-AGYASGTFSNISLNNIGNISNS--------GKYDSYTGGFAG-FAYGIFSNISLNNIGNI-SSSNSYDARAGGFAGSINSFLS-ITFKNIYIF +896231
UP..9_1498 +750 ISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHVYHKAGELGNAVADQNSW------GNTLDKINIHTYTNTN--SGYTDFENKVSAEldkdglhkdk +849
N I S +G + G YG N TF+N+H+YH +L NA D W G +KINIHTY N+N S Y DF K
CA..4_0923 +896234 FNPNMSI---SIDGGKFFGDKYGSAN--PTFDNVHIYHHVSDLTNANNDNSYWNDFNTNGYVSNKINIHTYNNSNQESVYQDFLSKANTISRPTPP---- +896531
UP..9_1498 +850 dgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDLDKIQGLSESIIQSISFLEALYGQEGMKEILEKFHNDYKTAYSKY +949
+ T+PDV+L SDDVISA DL+ WL EI AGNYW+DI DL+ I+G+SE + QSISFLEALYGQEGMKEILE F NDYKT Y Y
CA..4_0923 +896534 -------------TNPSNPTNPDVILGSDDVISANDLDTWLGEILAGNYWIDINDLNSIKGISEELKQSISFLEALYGQEGMKEILEGFGNDYKTNYRNY +896831
UP..9_1498 +950 DKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEETLNALKAQVDKLNQISGELATTIAKNQITLKDWQDKA +1049
+F TNKA LLAFINDKLKPLV SNKA LK QEQLKTAIAKYNDYVKKVNENP++KN+ TLN+LKA+VD+LN +S EL +I NQ+ L+ WQ+K
CA..4_0923 +896834 QRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKT +897131
UP..9_1498 +1050 SDDSNGQFTIKGQFDNVALLIPDLEKVTTNGNENDEYQKISRQIANLQKQTPTFeyeeeeteeveeASLNQKNKACIVSDNFKTMNPCVVGSF +1142
S+DSN +F I G+F N+ALL P+L++V NGNEN++Y+K+SRQ+AN QKQTPTFEYEE E EEVEE +L CIVSDNFKTMNPCVV SF
CA..4_0923 +897134 SNDSNNHFKIIGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALML---ICIVSDNFKTMNPCVVRSF +897410
UPTC3659_1498 vs: CAQ16704_0852 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2979bp / 993aa PV: No
Function: hemagglutination domain proteinScore: 877.00 bits: 382.12 e-value: 0.000000
length: 424 gaps: 28 id: 231 positives: 284 coverage: 0.54 query coverage 0.47
UP..9_1498 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIGKGESVNFGGKSQNYLNIAHGTSKSTIEGLLNANG +119
KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I +GESVNFGG +NYLNIAHGTSKSTI GLLNANG
CA..4_0852 +823467 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSNKNYLNIAHGTSKSTIAGLLNANG +823764
UP..9_1498 +120 KNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKVDIQGGKLGNEKSKTHLVGN +219
NVFLINPNGVIITKTGTINANRFVASTSS+ + D T F N+ + + +FSP+FKP K GNVVNMGNINA+ VLLIGNKVDIQGGKLGN S THLVGN
CA..4_0852 +823167 NNVFLINPNGVIITKTGTINANRFVASTSSLNNADYTTFKNLT-YENAHTFSPVFKPSKLGNVVNMGNINADKVLLIGNKVDIQGGKLGNANSTTHLVGN +823464
UP..9_1498 +220 KVFVDFGKSIIQSDYNFISALDKSHVYISSvdyyn--------nvnkynkanfvkGNYLTNAKNIEKFVSIG-------SDIDWWHFAKGWNENEQFRNT +319
V++D + + S N ++A+ ++ + N + G + N +K ++IG +W +FAKGWNEN+ + +
CA..4_0852 +822867 NVYIDADSANLNSTIN-VTAIQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFYFAKGWNENKGYTRS +823164
UP..9_1498 +320 ANEYRLINSIDFGGNQGKNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGLFGSSKGAVFKNINIDYMNGSIK +419
+E+RL+ +DF GNQG+NYANYC+ CTSMIVG +N F K+FDGQGYTLKNINID T L ++ VG+FG ++ A FKNIN+DYM G IK
CA..4_0852 +822567 VDEFRLVGNVDFSGNQGQNYANYCLSTYNCTSMIVGYQNNI-----FTKTFDGQGYTLKNINIDTTSLN-NKPYFVGIFGGTRNATFKNINVDYMGGGIK +822864
UP..9_1498 +420 SN-GDYNSIAIGSFVGYGENSKFD +443
N G+Y +G F G N F+
CA..4_0852 +822267 VNGGEY----VGGFAGGTLNGTFN +822336
Score: 1069.00 bits: 464.95 e-value: 0.000000
length: 627 gaps: 80 id: 301 positives: 370 coverage: 0.54 query coverage 0.47
UP..9_1498 +526 ASKSGGFAGQSYGYDDDYINYKNIIVSNIKNIYSEAKDNQGSFSGGFIGDIAYSESDifsnivvdnisniiaiGGKEGTRGGKMSNSGA--------GGF +625
+S GGF G Y YD + N + I NIY+ + N ++GGF G Y+ S + + G +SNS + GGF
CA..4_0852 +822192 SSYVGGFIG--YVYDGTFGNISLNNIYSITNIYASSTSNV--YTGGFAG---YAGSTNGTFYNISLNNI------------GSISNSASDSVFYVYTGGF +822489
UP..9_1498 +626 SGNIGLYYVNDKSKFSDIKINNIELIKSS--GMLSSAGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIASGEFGNIVITNIGS +725
+G D +++I +NNI I S +SS GGFT G Y NIS+ NI +IS +G S GF+G I G F NI + NIG
CA..4_0852 +821892 AGRT------DSGTYTNISLNNIGDIYSHNGSQISSTGGFTG-WANGTYTNISLNNIGDISN--------YGSASHHSSGFAGSIGYGSFTNISLNNIGN +822189
UP..9_1498 +726 IFSNTMQNDSYSGIFVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHVYHKAGELGNAVADQNSW------GNTLDKI +825
I SN + SG FVG + N F NI+I+ N I S +G + G Y N N TF+N+H+YH +L NA D W G +KI
CA..4_0852 +821592 INSNF---NRLSGGFVGYVND---NSTFKNIYIFFNPNMSI---SIDGGKFFGVKYSNAN--LTFDNVHIYHHVSDLTNANNDNSYWNDFNTNGYVSNKI +821889
UP..9_1498 +826 NIHTYTNTN--SGYTDFENKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDLDKIQGLSESI +925
NIHTY +N S Y DF K + T+PDV+L SDDVISA DL+ WL EI AGNYW+DI DL+ I+G+SE +
CA..4_0852 +821292 NIHTYNRSNQQSFYQDFLSKANTISRPTPP-----------------TNPSNPTNPDVILGSDDVISANDLDTWLGEILAGNYWIDINDLNSIKGISEEL +821589
UP..9_1498 +926 IQSISFLEALYGQEGMKEILEKFHNDYKTAYSKYDKFKTNKAELLAFINDKLKPLVDSSNKALDQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEETLN +1025
QSISFLEALYGQEGMKEILE F NDYKT Y Y +F TNKA LLAFINDKLKPLV SNKA LK QEQLKTAIAKYNDYVKKVNENP++KN+ TLN
CA..4_0852 +820992 KQSISFLEALYGQEGMKEILEGFGNDYKTNYRNYQRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLN +821289
UP..9_1498 +1026 ALKAQVDKLNQISGELATTIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLIPDLEKVTTNGNENDEYQKISRQIANLQKQTPTFeyeeeeteevee +1125
+LKA+VD+LN +S EL +I NQ+ L+ WQ+K S+DSN +F I G+F N+ALL P+L++V NGNEN++Y+K+SRQ+AN QKQTPTFEYEE E EEVEE
CA..4_0852 +820692 SLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKIIGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEE +820989
UP..9_1498 +1126 ASLNQKNKACIVSDNFKTMNPCVVGSF +1152
+L QK K CIVSDNFKTMNPCV GSF
CA..4_0852 +820392 TALMQKGKICIVSDNFKTMNPCVTGSF +820470
UPTC3659_1498 vs: CAQ16704_0012 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2751bp / 917aa PV: Yes
Function: hemagglutination domain proteinScore: 841.00 bits: 366.60 e-value: 0.000000
length: 420 gaps: 36 id: 238 positives: 272 coverage: 0.51 query coverage 0.41
UP..9_1498 +21 KKLSKQILLSNIVasl-----lfsssfalPSGGKFTHGTSGSISINGKEMNIAGNK--QNSIIQWGGGFNIGKGESVNFGG--KSQNYLNIAHGTSKSTI +120
KKL+ +I LS I SL + LPSGGKFTHGT+GSI ING MNI G +N +IQWGGGFNIGK V FG +NYLNIAHGTSKSTI
CA..4_0012 +11530 KKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFTHGTTGSININGNTMNINGTTPNKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTI +11827
UP..9_1498 +121 EGLLNANGKNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMTAFANMKNFNDGLSFSPIFKPHKagnvvnmgninannvLLIGNKVDIQGGKLGNEK +220
GLLNANG NVFLINPNGVIITKTGTINANRFVASTSSM M FANM NFNDGLSFSP+FKP K GNVVNMGNI A+N+ L GNKV + G + N
CA..4_0012 +11830 AGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKV-VLGSENYNNI +12127
UP..9_1498 +221 SKT-----HLVGNKVFVDFGKSIIQSDYNFISALD-----KSHVYISSvdyynnvnkynkanfvkGNYLTNAKNIEKFVSIGSDIDWWHFAKGWNENEQ- +320
K L GN+V+VD + D N + L+ K Y+ + YY N + + GN N + +V IGSD+DWWHFAKGWNEN+
CA..4_0012 +12130 NKVMAKNIKLEGNEVYVD----VASIDGNTLQGLNVDAKTKGNAYLNANGYYYNPYSFSVFSKISGN---NNFKKDAYVGIGSDVDWWHFAKGWNENKAG +12427
UP..9_1498 +321 FRNTANEYRLINSIDFGGNQGKNYANYCIDGLGCTSMIVGNGDNRSYLKSFDKSFDGQGYTLKNINIDATVLSFDENMNVGLFGSSKGAVFKNINIDYMN +420
FR +A EYRL IDFGGN KNYANYCIDGLGCTSMIVG F K+FDGQGYTLKNINID + LS E VG+FG A KNIN+DYM
CA..4_0012 +12430 FRTSASEYRLTKDIDFGGNNNKNYANYCIDGLGCTSMIVG----YDAYNGFTKTFDGQGYTLKNINIDTSSLS-SESEYVGIFGYINDATIKNINVDYMG +12727
UP..9_1498 +421 GSIKSN---GDYNSIAIGSF +440
G I++N G + A G+F
CA..4_0012 +12730 GGIRTNTYAGGFAGSASGTF +12787
Score: 715.00 bits: 312.24 e-value: 0.000000
length: 564 gaps: 83 id: 227 positives: 301 coverage: 0.51 query coverage 0.41
UP..9_1498 +606 GGKMSNSGAGGFSGNIGLYYVNDKSKFSDIKINNIELI--KSSGMLSSAGGFTADIHGGIYNNISVSNIKEISSDNNINGDPFGNREASSGGFSGNIASG +705
GG +N+ AGGF+G FS+I +NNI I S G S GF A GG + NIS+ NI +IS +GGF+G +A G
CA..4_0012 +12691 GGIRTNTYAGGFAGSA-------SGTFSNISLNNIGNISGNSNGDQSFVAGF-AGFAGGTFSNISLNNIGDISG-------------YHAGGFAGWLA-G +12988
UP..9_1498 +706 EFGNIVITNIGSIFSNTMQNDSYSGIFVGNIESPYSNRNFSNIFIYISDNHNIRSNSTNGQSYIGKFYGNLNGQTTFNNIHVYHKAGELGNAVADQNSWG +805
F NI + +IG I N + +G F G E + F NI+I+ N I + GKF+G NNIH+YH +L NA+ D+N WG
CA..4_0012 +12991 IFTNISLHDIGNISGN--KSHGIAGGFAGSYEN---DSTFKNIYIFFNPNAKISGRAP------GKFFGQPFWTAHLNNIHIYHSRNDLTNAITDRNYWG +13288
UP..9_1498 +806 NTLDKINIHTYTNTN--SGYTDFENKVSAEldkdglhkdkdgNLVFTKDFNINSPSKPTTDPDVVLESDDVISAKDLNQWLDEIFAGNYWVDIKDL---- +905
NT DKI IHTY N+N S Y DF K + + TD +V L+ +D + +N+ +++I Y ++I +L
CA..4_0012 +13291 NTNDKIQIHTYNNSNQQSSYQDFLSKANT--------------ISRPTPPSNPTTPPNLTDTNVKLDEND-LHQNIVNEIINDITNNHYEINIANLLNML +13588
UP..9_1498 +906 -DKIQGLSESIIQSISFLEALYGQEGMKEILEKFHN-DYKTAY-------SKYDKFKTN------------------KAELLAFINDKLKPLVDSSNKAL +1005
+K Q F+ + + + LE + D+ AY + DKF+ N K +L F+ LK LV N+ +
CA..4_0012 +13591 KEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSVKNTLVTNTKKVIKNKNDLFDFLSGDLKNLVVDYNQNI +13888
UP..9_1498 +1006 DQLKIIQEQLKTAIAKYNDYVKKVNENPAIKNEETLNALKAQVDKLNQISGELATTIAKNQITLKDWQDKASDDSNGQFTIKGQFDNVALLIPDLEKVTT +1105
LK QEQLKTAIAKYNDYVKKVNENP++KN+ TLN+LKA+VD+LN +S EL +I NQ L+ WQ K S DSN +F IKG+F N+ALL P+L++V
CA..4_0012 +13891 TDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKGEFKNLALLTPNLDEVIV +14188
UP..9_1498 +1106 NGNENDEYQKISRQIANLQKQTPTFeyeeeeteeveeASLNQKNKACIVSDNFKTMNPCVVGSF +1169
NGNEN++Y+K+SRQ+AN QKQTPTFEYEE E EEVEE +L QK K CIVSDNFKTMNPC+V SF
CA..4_0012 +14191 NGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCIVRSF +14380