Gene group 110

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
110pseHUDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase111161Cj1313
CJ..6_1330
A911_06385
PJ16_07315
PJ17_06955
N135_01402
N564_01331
N565_01370
N755_01366
PJ18_06760
PJ19_07315
JJ..7_0400
BN.._13020
M635_02255
UC78_1262
C8J_1246
CJ.._06540
RC25_06210
CJ..m_1285
CJH_06645
CJSA_1251
IC..1_1259
CJM1_1285
MT..0_1308
ER.._01425
A0.._07070
H730_07515
CJE1508
Cj..5_1327
AX.._06465
Cj..6_1330
Cj..7_1330
CJS3_1413
A0.._07750
QZ67_01448
N149_1276
AB.._08230
G157_02240
VC76_06605
AR.._01585
AT.._00938
YSQ_02280
YSS_07135
YSU_02295
A6.._02260
CINS_1277
UP..0_1301
CONCH_1276
UP..9_1537
Cla_1322
Cla_1325
UP..1_1295
UP..2_1317
CD56_06770
CPEL_1427
CA..4_1327
CA..4_1330
CS..1_1504
CS..1_1507
CS..3_1600
CS..3_1603

Annotated functions

Function#Occuringscore
UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase41.57
UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase (1 domain)11.44
N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc11.09
N-acetyltransferase PseH10.43
Acetyltransferase, GNAT family10.38
acetyltransferase20.33
hypothetical protein10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
C8J_1246
RC25_06210
CJ..m_1285
CJM1_1285
MT..0_1308
1
Cla_1322
CPEL_1427
CA..4_1327
CA..4_1330
CS..1_1504
CS..3_1600

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
C8J_1246
RC25_06210
CJ..m_1285
CJM1_1285
MT..0_1308
1
Cla_1322
CPEL_1427
CA..4_1327
CA..4_1330
CS..1_1504
CS..3_1600

81116; NCTC 11828

81116; NCTC 11828 : C8J_1246 [tract entry] [top]

Function: hypothetical protein
+0 LIKLKNFTELNPQEIELIFKWRNHPDISQFMKTKHIDFEEHLRFLKNLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPDLKGVGQILMNEI
+100 IKYAFENLKVNTLKAYVFKDNHKALKLYQQNHFTIYDEDKNIFYIKLKNYNYKKQFAKRISKLDRGGGVNTNIKNILMTNFLKLLNII

[show detailed alignment]

CJ677CC519

CJ677CC519 : RC25_06210 [tract entry] [top]

Function: acetyltransferase
+0 LIKLKNFTELNPQEIELIFKWRNHPDISQFMKTKHIDFEEHLRFLKNLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPDLKGVGQILMNEI
+100 IKYAFENLKVNTLKAYVFKDNHKALKLYQQNHFTIYDEDKNIFYIKLKNYNYKKQFAKRISKLDRGGGVNTNIKNILMTNFLKLLNII

[show detailed alignment]

CJM1cam

CJM1cam : CJM1cam_1285 [tract entry] [top]

Function: N-acetyltransferase PseH
+0 LIKLKNFTELNPQEIELIFKWRNHPDISQFMKTKHIDFEEHLRFLKNLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPDLKGVGQILMNEI
+100 IKYAFENLKVNTLKAYVFKDNHKALKLYQQNHFTIYDEDKNIFYIKLKNYNYKKQFAKRISKLDRGGVNTNIKNILMTNFLKLLNII

[show detailed alignment]

M1

M1 : CJM1_1285 [tract entry] [top]

Function: Acetyltransferase, GNAT family
+0 LIKLKNFTELNPQEIELIFKWRNHPDISQFMKTKHIDFEEHLRFLKNLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPDLKGVGQILMNEI
+100 IKYAFENLKVNTLKAYVFKDNHKALKLYQQNHFTIYDEDKNIFYIKLKNYNYKKQFAKRISKLDRGGVNTNIKNILMTNFLKLLNII

[show detailed alignment]

MTVDSCj20

MTVDSCj20 : MTVDSCj20_1308 [tract entry] [top]

Function: UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase
+0 LIKLKNFTELNPQEIELIFKWRNHPDISQFMKTKHIDFEEHLRFLKNLHQDSSKKYFLVFQDEQIIGVIDFVNITTKSCEFGLYAKPDLKGVGQILMNEI
+100 IKYAFENLKVNTLKAYVFKDNHKALKLYQQNHFTIYDEDKNIFYIKLKNYNYKKQFAKRISKLDRGGVNTNIKNILMTNFLKLLNII

[show detailed alignment]

RM2100; ATCC BAA-1060D

RM2100; ATCC BAA-1060D : Cla_1322 [tract entry] [top]

Function: N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc
+0 MLKNFIDLNEFEKEFVLKYRNDKNINKFMKNKNITHEEHLNFIQNLKNDCTKRYFLVYKSDQAIGVIDFINITINSCEFGLYGIKKGVGNSLMEEIKNYA
+100 FNVLKIQNLNACVFKENIKALNLYLKHGFNIINENDEFYFVNLNNYYWGGVATNNSIFYKVAI

[show detailed alignment]

LMG 23910

LMG 23910 : CPEL_1427 [tract entry] [top]

Function: UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase
+0 MIILKDFIHLNQEEINLVLKWRNNKSIAKFMKTQNITLKEHLSFLSSLKTDTTKKYFLVYDSKQAIGVIDFINITNHSCEFGLYGIKKGVGELLMQEVKN
+100 YAFNVLKVQTLSACVFKENTKALNLYLKHKFKINKEDNNFYLMFLFLDIMVGGGELNTSYSFTFLKKVA

[show detailed alignment]

RM16704

RM16704 : CAQ16704_1327 [tract entry] [top]

Function: UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase (1 domain)
+0 MIFLKDFIYLSQDEIKLIFKWRNNENIAKFMKTQNINLKEHLNFLSTLKTDDTKKYFLVYNDKDTIGVIDFINITETSCEFGLYGIKKGVGDLLMEEIKN
+100 YAFNILKVQVLNACVFKENTKALNLYLKHDFTIYSENDKFFFVCLNSNGGGGYSLIFIFLKVAI

[show detailed alignment]

RM16704 : CAQ16704_1330 [tract entry] [top]

Function: acetyltransferase
+0 MIVYKDFVNLNHKECKEILKIRNSKNIAKFMKNPYINYEEHLNFIQKLKNTATKKYFLIYKENKKLGVIYFTNINKNSCEFGLYGIKKGVGDLLMEEIKN
+100 YAFNILKVQVLNACVFKENTKALNLYLKHDFTIYSENDKFFFVCLNSNGGGGIVYRFHICNPTFFKKVV

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_1504 [tract entry] [top]

Function: UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase
+0 MIILKDFIHLSQEEIKLVLKWRNDENIAKFMKTKNISLKEHLKFLSQLKLDNTKKYFLVYDDKNIIGVIDFINITNHSCEFGLYGIQKGVGELLMQEVKN
+100 YAFNVLKVQTLNACVFKENTKALNLYLEHGFKIIKKDNNFYFTSLLPAYMGGGSNLNIFNQIYGVAV

[show detailed alignment]

LMG 24377

LMG 24377 : CSUB8523_1600 [tract entry] [top]

Function: UDP-4-amino-4,6-dideoxy-beta-L-AltNAc o-acetyltransferase
+0 MIILKDFIHLNQEEIKLVLKWRNEENIARFMKTQNITLEEHLKFLSQLKLDNTKKYFLVYDDKNIIGVIDFINITNHSCEFGLYGIQKGVGELLMQEVKN
+100 YAFNILKVQTLNACVFKENTKALKLYLKHGFKIIKKDNNFYFTSLLPVYMGGGSNLNTFNQIYGVAV

[show detailed alignment]