CPEL_1275 vs: CONCH_1119 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 2796bp / 932aa PV: No
Function: hemagglutinin domain-containing proteinScore: 884.00 bits: 385.14 e-value: 0.000000
length: 571 gaps: 59 id: 256 positives: 325 coverage: 0.52 query coverage 0.41
CPEL_1275 +20 LTPSKKLTNHILLSSIVASLLFSPLAAISPNALPSGGKFTHGTSGTITKPNNTTMNIHGNKINSVIQWGGGFNIGNKAQVNFEGSGKNYLNIAHGTNKST +119
+ + KL+NHI+LS I S+LFSPL A LPSGGKFTHGTSG+I+ N MNI GN NSVIQWGGGFNIG QVNF GS KNYLNIAHGT KST
CONCH_1119 +1083142 MMKTYKLSNHIILSGITVSMLFSPLMA-----LPSGGKFTHGTSGSISTSGNN-MNIMGNGTNSVIQWGGGFNIGKNEQVNFNGSNKNYLNIAHGTSKST +1083439
CPEL_1275 +120 IAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANL-SQEQGNSFSPVFKPQKAGSVVNMGNINANDVLLIGNKVDIQGGKVGNK +219
I GILNA NNVFLINPNGVIITKTG INANRFVASTSSMS+++M FANL S ++G SFSPVFKP+KAG VVNMGNIN NDVLLIGNKVDIQGG++GN+
CONCH_1119 +1082842 IEGILNASGNNVFLINPNGVIITKTGTINANRFVASTSSMSDDNMKAFANLKSFDEGLSFSPVFKPHKAGNVVNMGNINTNDVLLIGNKVDIQGGRLGNE +1083139
CPEL_1275 +220 NSTTHLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDNNNKLTENKVQKIDFKQYLTIDSVG-------EWVIFAN +319
S THLVGN++ ++ S T N+TAL + M F + Y F +YT+ N + + FK+ LTI +G EW F+
CONCH_1119 +1082542 KSKTHLVGNEVFVDADSVKLSSTINVTALKGGYIQRQMINFANNNYSFGNNIKINNVDYTETNGQTHKGSSS---FKKALTIGNMGDEKANTIEWWHFSK +1082839
CPEL_1275 +320 AWNNNKGDTRKVKEFRLINNIDFNNDFKPEYMVGYVFYDSSKKAYDWSSAFTSTFNGNGYTLSNIKLDTSSYSSTNKHKDHYVGIFSgvgnggvvknlkv +419
WN GDT+ + EFRL+++IDF AYD+ AF FNGNGYTL NI + N KD+ VG+F V N + N+ +
CONCH_1119 +1082242 GWNEGLGDTKNIDEFRLVDDIDFSGTTVDPI------------AYDYKNAFDKMFNGNGYTLKNITI--------NANKDYNVGLFG-VINNAEISNIAI +1082539
CPEL_1275 +420 ENIATKGQR----ATGTIAGASDGGSFYDISMKNIKEVYATNNYAGGFIGLIRGANVGNYERISIDGIEKVYA--NGYS---VVGAGAFTGSLSAGIFKD +519
+ I K + G AG +I++ NI + GGF G I + + N ++I+ IE + A G S VG G FTG S+ + +
CONCH_1119 +1081942 DTINFKYDKDLPFRIGGFAGHIGNSNISNITLNNIGAINGV-RIVGGFSGNISDSYISN---VTINQIESISALNEGQSAGNAVGVGGFTGMNSSTTYDN +1082239
CPEL_1275 +520 ISINNVGIIYGTASGG------FAGMAGQAGSLAPNVEKMIFENIKLTDYD--AIGGNWTWTGGFIANFWG +590
I +NN+G I T G G++ L+ F+NI + + ++ G+W +I F G
CONCH_1119 +1081642 IILNNIGDISLTNKIGNVFTSYIGWFVGRSDQLSSSGNANSFKNIAIDNVGNISVNGDWGNYDLYIGSFAG +1081852
Score: 545.00 bits: 238.91 e-value: 0.000000
length: 604 gaps: 82 id: 224 positives: 307 coverage: 0.52 query coverage 0.41
CPEL_1275 +590 VGGFIARSDNGKYENITLNNIGEISATRGHDSSggfigiiengefKNIKLNDIDLI------KFVGNQY-YGLFAGEISKGKYENISISNVKNIDIKN-- +689
+GGF N NITLNNIG I R GGF G I + N+ +N I+ I + GN G F G S Y+NI + N+ +I + N
CONCH_1119 +1081990 IGGFAGHIGNSNISNITLNNIGAINGVR---IVGGFSGNISDSYISNVTINQIESISALNEGQSAGNAVGVGGFTGMNSSTTYDNIILNNIGDISLTNKI +1082287
CPEL_1275 +690 -----SRFGLFAGMIGKSYTPGNSN-FKSIIIHDISNIKydgytsggygdpyygymgVFAIDAKNATLENIFISL-KGLTISND--YRDDLRFQTAFIYN +789
S G F G + + GN+N FK I I ++ NI +G ++ ++ T++NI+I + K IS + +R + A I N
CONCH_1119 +1081690 GNVFTSYIGWFVGRSDQLSSSGNANSFKNIAIDNVGNISVNGDWGNYDLYIGSFAGALYG--SQKDTIQNIYIFIGKNSQISYNRYFRGYYLGKFAGILN +1081987
CPEL_1275 +790 -NESNTAFSDNNVIFKNVNVYYDKDLFSAYDKVDSGKYQNNVNFLQNQYDNFIASAQTATGLQYDKTSNSFQTTTDFKLTDPIFTTIGEGGNNPNEVKLD +889
N N N+ N+N D F D G + +N YD+ S Q + +++ Q K + PI T +P +V L+
CONCH_1119 +1081390 ANLDNVHIYSNDNTLSNIN----NDSFFVNDFNKNGYISDKINI--HTYDD---STQNDAYKDFLSKADTIQ-----KPSKPIDPT------DP-DVVLE +1081687
CPEL_1275 +890 ENDLLQEMIKKEIIANITNGKYKLHISDL-LKMLEDKANYSNMGEEQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFKGNGFSTKES +989
+D++ + + I NG Y + I DL L+ + ++ +Q + F+ + LE + S+D Y+K + DKF N F ++
CONCH_1119 +1081090 SDDVISANDLNKWLDEIYNGTYWVDIKDLKLQGVSEEI-------QQSIAFLEALYGQSGMQDILEKI-SID----YKK------ASDKF--NTFNKNKT +1081387
CPEL_1275 +990 ILKQVnnttknikdkinQLNDELKSLANESKGFLKDLIAKQNELDVVIKAYNKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILINTKQNELST +1089
L +N +LK L N + L L+ KQ ELD +IKAYN YV LINKGLA + DPEF+ LKN+I+TLM +S LA I QN L
CONCH_1119 +1080790 ELLLF-------------INTQLKDLVNATNDKLNILLTKQKELDTLIKAYNNYVALINKGLANESDPEFITLKNQINTLMSESDVLASEIGLNQNTLKL +1081087
CPEL_1275 +1090 WQNKNNTE---NFKVIGAFANVVLNTNPKLDQIKGDGGEGEDPNKPELPEIDLEFEQTASLNLIGDesleeeeeeheieeAAITQRARTCIVSDNFKTMN +1189
WQ+K + FK+IGAFANV+LNTNPKLDQI +GG GEDPNKPELP+ DLEFEQTAS NLIGDE++EEE+EE E+EE A+ Q+ RTCIVSDNFKTMN
CONCH_1119 +1080490 WQDKASKDSNGHFKIIGAFANVILNTNPKLDQITEEGGGGEDPNKPELPDNDLEFEQTASFNLIGDETVEEEKEEKEVEETAMMQKNRTCIVSDNFKTMN +1080787
CPEL_1275 +1190 PCVV +1193
PC V
CONCH_1119 +1080190 PCAV +1080199
CPEL_1275 vs: CONCH_1474 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 3060bp / 1020aa PV: No
Function: hemagglutinin domain-containing proteinScore: 939.00 bits: 408.87 e-value: 0.000000
length: 642 gaps: 106 id: 281 positives: 357 coverage: 0.58 query coverage 0.51
CPEL_1275 +20 LTPSKKLTNHILLSSIVASLLFSPLAAISPNALPSGGKFTHGTSGTITKPNNTTMNIHGNKINSVIQWGGGFNIGNKAQVNFEGSGKNYLNIAHGTNKST +119
+ + KL+NHI+LS I S+LFSPL A LPSGGKFTHGTSG+I+ N MNI GN NSVIQWGGGFNIG QVNF GS KNYLNIAHGT KST
CONCH_1474 +1443272 MMKTYKLSNHIILSGITVSMLFSPLMA-----LPSGGKFTHGTSGSISTSGNN-MNIMGNGTNSVIQWGGGFNIGKNEQVNFNGSNKNYLNIAHGTSKST +1443569
CPEL_1275 +120 IAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANL-SQEQGNSFSPVFKPQKAGSVVNMGNINANDVLLIGNKVDIQGGKVGNK +219
I GILNA NNVFLINPNGVIITKTG INANRFVASTSSMS+++M FANL S ++G SFSPVFKP+KAG VVNMGNIN NDVLLIGNKVDIQGG++GN+
CONCH_1474 +1443572 IEGILNASGNNVFLINPNGVIITKTGTINANRFVASTSSMSDDNMKAFANLKSFDEGLSFSPVFKPHKAGNVVNMGNINTNDVLLIGNKVDIQGGRLGNE +1443869
CPEL_1275 +220 NSTTHLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDNNNKLTENKVQKIDFKQYLTIDSVG-------EWVIFAN +319
S THLVGN++ ++ S T N+TAL + M F + Y F +YT+ N + + FK+ LTI +G EW F+
CONCH_1474 +1443872 KSKTHLVGNEVFVDADSVKLSSTINVTALKGGYIQRQMINFANNNYSFGNNIKINNVDYTETNGQTHKGSSS---FKKALTIGNMGDEKANTIEWWHFSK +1444169
CPEL_1275 +320 AWNNNKGDTRKVKEFRLINNIDFN---------NDFK--PEYMVGYVFYDSSKKAYDWSSAFTSTFNGNGYTLSNIKLDTSSYSSTNKHKDHYVGIFSgv +419
WN GDT+ + EFRL+++IDF D + Y + + S + AFT TFNG GY L NI +D ++ +K + Y+GIF
CONCH_1474 +1444172 GWNEGLGDTKNIDEFRLVDDIDFSGNQGNGVEGKDWQNYANYCIDGLGCTSMIVGSTDTNAFTKTFNGQGYALKNINMDITTLE--DKSEYTYIGIF--- +1444469
CPEL_1275 +420 gnggvvknlkvENIATKGQRATGTIAGASDGGSFYDISM----------KNIKEVYATNNYAGGFIGLIRGANVGNYERISIDGIEKVY---ANGYSVVG +519
G SDG F +I + KN+ + + Y GGFIG +N +E IS+ IE + + SVV
CONCH_1474 +1444472 --------------------------GNSDGANFKNINIDYMNGKIQKQKNVNDGWR---YIGGFIG---KSNNSFFEYISLSNIESISNSNRDDNSVV- +1444769
CPEL_1275 +520 AGAFTGSLSAGIFKDISINNVGIIYGTA----SGGFAGMAGQAGSLAPNVEKMIFENI-KLTDYDAIGGNWTWTGGFIANFWGHKTKEVLFKNILLDDIR +619
G F GS S G F +IS+NN+ I +A +GGFAG G+ + N+ ENI +DY GG W+ GGF T F NI L++I+
CONCH_1474 +1444772 -GGFIGSAS-GTFSNISLNNIRNIENSADDTWTGGFAGST--LGTFS-NISLNNIENISSYSDYGMYGG-WSRAGGFAG------TTNGTFSNISLNNIK +1445069
CPEL_1275 +620 KITAEQA----------VGGFIARSDNGKYENITLNNIGEIS +661
I++ GGF+ S N ++NI+LN I +I+
CONCH_1474 +1445072 NISSRGGNYGNKYGNSYAGGFVGESYNSDFDNISLNSIEKIT +1445195
Score: 1016.00 bits: 442.08 e-value: 0.000000
length: 650 gaps: 80 id: 312 positives: 379 coverage: 0.58 query coverage 0.51
CPEL_1275 +553 WTWTGGFIANFWGHKTKEVLFKNILLDDIRKITAE-----QAVGGFIARSDNGKYENITLNNIGEISATRGHDSSggfigiiengefKNIKLNDIDLIK- +652
W + GGFI K+ F+ I L +I I+ VGGFI S G + NI+LNNI I + D+ G G F NI LN+I+ I
CONCH_1474 +1444517 WRYIGGFIG-----KSNNSFFEYISLSNIESISNSNRDDNSVVGGFIG-SASGTFSNISLNNIRNIENS-ADDTWTGGFAGSTLGTFSNISLNNIENISS +1444814
CPEL_1275 +653 ------FVGNQYYGLFAGEISKGKYENISISNVKNIDIKNSRFG------LFAGMIGKSYTPGNSNFKSIIIHDISNIKydgytsggygdpyygymgVFA +752
+ G G FAG + G + NIS+ N+KNI + +G G +G+SY NS+F I + I I G G G G +
CONCH_1474 +1444817 YSDYGMYGGWSRAGGFAG-TTNGTFSNISLNNIKNISSRGGNYGNKYGNSYAGGFVGESY---NSDFDNISLNSIEKITAYGAWGGYAGGFAGGVGYPYR +1445114
CPEL_1275 +753 IDAKNATLENIFISLKGLTISNDYRDDL--RFQTAFIYNNESNTAFSDNNVIFKNVNVYY-DKDLFSAYDKVDSGKYQNNVNFLQ----------NQYDN +852
A+ NIFI N +D F F+ S AF DN + +Y+ DKDL SA D + N +Q N Y +
CONCH_1474 +1445117 -----ASFSNIFIYFNPNITLNARKDSSGKLFGKLFL----SHNAFLDN------IHIYHSDKDLHSA--TADQNYWGSTSNEIQIHTYDDSTQNNAYKD +1445414
CPEL_1275 +853 FIASAQTATGLQYDKTSNSFQTTTDFKLTDPIFTTIGEGGNNPN-EVKLDENDLLQEMIKKEIIANITNGKYKLHISDLLKMLEDKANYSNMGEEQKVEF +952
F++ A T + PI + +NP+ +V L +DL Q+ I EIIA+I KY + I LL MLED+ NY NM E QKVEF
CONCH_1474 +1445417 FLSKADT--------------------IQKPILPSKPIDPDNPDSDVILSSDDLYQDTITNEIIADIISKKYNIPIYLLLDMLEDRLNYFNMNENQKVEF +1445714
CPEL_1275 +953 VAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFKGNGFSTKESILKQVnnttknikdkinQLNDELKSLANESKGFLKDLIAKQNELDVVIKAY +1052
VAKYFL GDKT+ALEV+QSL+F+LAYE NGLSTAS DKFK NGF KE ILKQ NT KNI DKINQL++ELKSL S +LKDLI KQN+L+ +IKAY
CONCH_1474 +1445717 VAKYFLGGDKTQALEVIQSLNFILAYENNGLSTASKDKFKENGFIAKEEILKQTSNTAKNINDKINQLDNELKSLVISSDKYLKDLIVKQNKLNEIIKAY +1446014
CPEL_1275 +1053 NKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILINTKQNELSTWQNKNNTENFKVIGAFANVVLNTNPKLDQIKGDGGEGEDPNKPELPEIDLE +1152
N YV LINKGLA + DPEF+ LKN+ID LMKDSQ LA LIN Q ELS WQN NNTENFKV+GAFANV+LNTNPKLDQI +GG GEDPNKPELP+ DLE
CONCH_1474 +1446017 NNYVALINKGLANESDPEFITLKNQIDVLMKDSQILADLINENQKELSIWQNNNNTENFKVVGAFANVILNTNPKLDQITEEGGGGEDPNKPELPDNDLE +1446314
CPEL_1275 +1153 FEQTASLNLIGDesleeeeeeheieeAAITQRARTCIVSDNFKTMNPCVV +1202
FEQTAS NLIGDE++EEE+EE E+EE A+ Q+ RTCIVSDNFKTMNPC V
CONCH_1474 +1446317 FEQTASFNLIGDETVEEEKEEKEVEETAMMQKNRTCIVSDNFKTMNPCAV +1446464
CPEL_1275 vs: Cla_1530 in RM2100; ATCC BAA-1060D (Campylobacter lari RM2100, complete genome.)
Gene length: 3258bp / 1086aa PV: No
Function: conserved hypothetical protein, hemagglutination domain proteinScore: 718.00 bits: 313.54 e-value: 0.000000
length: 564 gaps: 77 id: 247 positives: 301 coverage: 0.50 query coverage 0.47
CPEL_1275 +24 KKLTNHILLSSIVASLLFSPLAAISPNALPSGGKFTHGTSGTITKPNNTTMNIHGNKINSVIQWGGGFNIGNKAQVNFEGSGKNYLNIAHGTNKSTIAGI +123
KKL NHI+LS + S+LFSPL A LPSGGKFTHGTSGTIT N MNI GN INSVIQWGGGFNI N +VNF G KNYLNIAHGT KSTIAGI
Cla_1530 +1481418 KKLANHIILSGVTVSMLFSPLMA-----LPSGGKFTHGTSGTIT-TNGNNMNISGNGINSVIQWGGGFNIANGEKVNFGGKDKNYLNIAHGTSKSTIAGI +1481715
CPEL_1275 +124 LNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANL-SQEQGNSFSPVFKPQKAGSVVNMGNINANDVLLIGNKV----DIQGGKVGNK +223
LNA NNVFLINPNGVIITKTG INANRFVASTSSMS+ DM FANL S E G SFSPVFKP KAG VVNMGNINA ++ L GNKV D NK
Cla_1530 +1481718 LNAGGNNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMKAFANLKSFEDGLSFSPVFKPNKAGNVVNMGNINAKNITLQGNKVMLSADTSWDDKNNK +1482015
CPEL_1275 +224 NSTTHLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDN-NNKLTE-----NKVQKIDFKQYLTIDSVGEWVIFANA +323
++ +++ L + I+ +NS L+ E K G + T Y N K E NK++K + QY++I S +W FA
Cla_1530 +1482018 IKFNQITADNIDLKGNEIYVD----ISTINSKNLTT--------EAKNKGIAYLSATGYYYNPTRKYNEFKNINNKIKKT-YNQYISIGSDVDWWHFAKG +1482315
CPEL_1275 +324 WNNNKGDTRKVKE--FRLINNIDFNNDFKPEYMVG--YVFY------DSSKKAYDWSSA-------FTSTFNGNGYTLSNIKLDTSSYSSTNKHKDHYVG +423
WN N+ V E F+L N+IDF + K G Y Y D K A +++ FT TF+G G+TL NI +D + + S VG
Cla_1530 +1482318 WNENEDFRNNVAEDTFKLTNDIDFGANCKNGVCSGQNYANYWVDLNGDGKKDANEYTNMMVGSGEFFTKTFDGQGFTLKNINIDITNWGS--------VG +1482615
CPEL_1275 +424 IFSgvgnggvvknlkvE----NIATKGQRATGTIAGASD---GGSFYDISMKNIKEV--YATNNYAGGFIGLIRGANVGNYERISIDGIEKVYANG---Y +523
IF+ G KN+ V+ I KG R G G S G SF +IS+ I + + GGF G A + IS++ I + N Y
Cla_1530 +1482618 IFASASSGANFKNINVDYMGGGINAKGTRWVGGFIGTSYMRFGPSFSNISLNKIGSINSGGSVGPVGGFAG---SAYNNTFSNISLNEIGNISGNSNFKY +1482915
CPEL_1275 +524 SVVGAGAFTGSLSAGIFKDISINNVGIIYGTAS------GGFAGMAGQAGSLAPNVEKMIFENI +587
+ G F G F +IS+N +G I G + GGF G A + + + K I ENI
Cla_1530 +1482918 AFSSIGGFVGESMDSTFSNISLNKIGNISGNSETNTIYVGGFVGYANEKNNFSDIIIKKI-ENI +1483107
Score: 1005.00 bits: 437.34 e-value: 0.000000
length: 654 gaps: 76 id: 299 positives: 376 coverage: 0.50 query coverage 0.47
CPEL_1275 +573 FKNILLDDIRKIT-------AEQAVGGFIARSDNGKYENITLNNIGEISATRGHDSSggfigiiengefKNI------KLNDIDLIKFVGNQYYGLFAGE +672
F NI L++I I+ A ++GGF+ S + + NI+LN IG IS ++ + E N K+ +I I + G G
Cla_1530 +1482768 FSNISLNEIGNISGNSNFKYAFSSIGGFVGESMDSTFSNISLNKIGNISGNSETNTIYVGGFVGYANEKNNFSDIIIKKIENISSISNNCSHSGGFAGGG +1483065
CPEL_1275 +673 ISKGKYENISISNVKNID-IKNSRFGLFAGMIGKSYTPGNSNFKSIIIHDISNIKydgytsggygdpyygymgVFAIDAKNATLENIFISLKGLT----I +772
+ GK+E I + N+ NI+ S+ G IG + + + I D+ NI G + A +A FI + +
Cla_1530 +1483068 LMGGKFERIFLENIANINSTSKSKSAYAGGFIGNNISYYTTYYNEKFIFDVNNISLKGVSNITSK----------AENAYAGGFAGFFIEKRKVEDYDGS +1483365
CPEL_1275 +773 SNDYRDDLRFQTAFIYNNESNTAFSDNN-----------------VIFKNVNVYYDKDLFS-------AYDKVDSGKYQNNVNFLQNQYDNFIASAQTAT +872
N Y + + ++Y +E ++NN + F N+ +YY KD + +K D K NNVN + N A + +
Cla_1530 +1483368 KNGYSYKINLKNIYMYFDEDAKITANNNKNNFTGKFYGGMEDIKEIAFDNIHIYYKKDTLTNATADDKYLNKQDFNKNANNVNKI-----NAYAYSDSNK +1483665
CPEL_1275 +873 GLQYDKTSNSFQTTTDFKLTDPIFTTIGEGGNNPNE-------------VKLDENDLLQEMIKKEIIANITNGKYKLHISDLLKMLEDKANYSNMGEEQK +972
Y+ N T ++ PIF I N LDENDLL+EMIK EIIA+ITNGKYKLHISDLLKMLEDK NYSNM E QK
Cla_1530 +1483668 EQAYENFINHVNT-----ISKPIFPIIPPSKPSQNTDYIPNAEDIINKTAVLDENDLLKEMIKNEIIADITNGKYKLHISDLLKMLEDKTNYSNMSENQK +1483965
CPEL_1275 +973 VEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFKGNGFSTKESILKQVnnttknikdkinQLNDELKSLANESKGFLKDLIAKQNELDVVI +1072
+EF+AKYFLSGDKTKALEVVQSLDFLLAYE NGLSTAS DKF+GNGF K IL QVNNTT+NIK K NQL EL+ L N S +LKDLI KQNELD I
Cla_1530 +1483968 IEFIAKYFLSGDKTKALEVVQSLDFLLAYENNGLSTASEDKFEGNGFGVKNEILSQVNNTTENIKGKFNQL-KELEPLVNSSNKYLKDLITKQNELDNAI +1484265
CPEL_1275 +1073 KAYNKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILINTKQNELSTWQNKNNTENFKVIGAFANVVLNTNPKLDQIKGDGGEGEDPNKPELPEI +1172
KAYN YV LINKG A +D EF+ILK++I+TLMK+SQ LA IN Q +L WQN NNTENFKV+GAFANV+LNTNPKLDQI G GG+ ++PNKPELPE
Cla_1530 +1484268 KAYNTYVDLINKGFASADDREFIILKDQINTLMKESQVLADSINENQGKLIDWQNNNNTENFKVVGAFANVILNTNPKLDQITGKGGDIDNPNKPELPET +1484565
CPEL_1275 +1173 DLEFEQTASLNLIGDesleeeeeeheieeAAITQRARTCIVSDNFKTMNPCVVG +1226
D+EFEQTASLNLIGD ++E+ E + EIEE ++ Q+ +TCIVSDN+KTMNPCVVG
Cla_1530 +1484568 DMEFEQTASLNLIGDNAIEDNEGKKEIEETSLAQKNKTCIVSDNYKTMNPCVVG +1484727
CPEL_1275 vs: UPTC16701_0686 in RM16701 (Campylobacter lari RM16701, complete genome.)
Gene length: 3456bp / 1152aa PV: No
Function: hemagglutinin domain-containing proteinScore: 2562.00 bits: 1108.98 e-value: 0.000000
length: 1198 gaps: 102 id: 675 positives: 798 coverage: 0.59 query coverage 0.57
CPEL_1275 +24 KKLTNHILLSSIVASLLFSPLAA----ISPNALPSGGKFTHGTSGTITKPNNTTMNIHGNKI--NSVIQWGGGFNIGNKAQVNFEGSGK-NYLNIAHGTN +123
KKL NHI+LS + S+L SP+ A + PN LPSGGKFTHGTSG I NT MNI G N VIQWGGGF IGNKAQVNF+G G+ NYLNIAHGT+
UP..1_0686 +658282 KKLANHIILSGVTVSMLLSPMVAADKPLNPNQLPSGGKFTHGTSGKIETSGNT-MNITGTTASGNHVIQWGGGFSIGNKAQVNFKGDGQHNYLNIAHGTD +658579
CPEL_1275 +124 KSTIAGILNAKDNNVFLINPNGVIITKTGNI-NANRFVASTSSMSNEDMNKFANLSQ-EQGNSFSPVFKPQK-AGSVVNMGNINANDVLLIGNKVDIQGG +223
KSTI G+LNA NNVFLINPNGVII K+G I NANRFVASTSSMS+ DM FAN+ + G SFSPVFKP+ G VVNMGNINAN+VLLIGNKVDIQGG
UP..1_0686 +658582 KSTIEGLLNAGGNNVFLINPNGVIIEKSGSIINANRFVASTSSMSDGDMTAFANMKKFNDGLSFSPVFKPKPNGGNVVNMGNINANNVLLIGNKVDIQGG +658879
CPEL_1275 +224 KVGNKNSTTHLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDNNNKLTENKVQKIDFKQYLTIDSVGEWVIFANAW +323
KVGNKNSTTHLVGNDLVLNPSSFA NKTN +TAL SV ++ASMSAFEDG YKFVG D FTLTNYTDNNNK+TENKVQKIDFKQYLTIDSVGEW IFA+AW
UP..1_0686 +658882 KVGNKNSTTHLVGNDLVLNPSSFAGNKTNYLTALKSVSIAASMSAFEDGGYKFVGADGFTLTNYTDNNNKVTENKVQKIDFKQYLTIDSVGEWAIFADAW +659179
CPEL_1275 +324 NNNKGDTRKVKEFRLINNIDFNNDFKPEYMVGYVFYDSSKKAYDWSSAFTSTFNGNGYTLSNIKLDTSSYSSTNKHKDHYVGIFSgvgnggvvknlkvE- +423
NN++GDTR VKEFRLI++IDF NDFKPEYMVGY Y S W AFTSTFNGNGYTLSNIK+D ++ +GIF V G +
UP..1_0686 +659182 NNDRGDTRDVKEFRLIDDIDFKNDFKPEYMVGYTSYSS------WDGAFTSTFNGNGYTLSNIKMDLDQLKISDPRY-RVIGIFGAVDGGSIRNLKVNNV +659479
CPEL_1275 +424 --NIATKGQRAT---GTIAGASDGGSFYDISMKNIKEVYATNNY---AGGFIGLIRGANVGNYERISIDG--IEKVYANGYSVVGAGAFTGSLSAGIFKD +523
+ GQ G + G + F DI + NIK + NY AGGF GL + G Y RI I+G IE +Y V +G F G++ G F D
UP..1_0686 +659482 DFKVNVNGQSNAINIGGLVGKTQNSKFEDIELSNIK---LSGNYFQNAGGFAGLSK--QDGEYSRIKINGVNIEALYG-----VNSGGFIGTIDGGKFYD +659779
CPEL_1275 +524 ISI-----NNVGIIYGTAS--GGFAGMAGQAGSLAPNVEKMIFENIKLTDYDAI-GGNWTWTGGFI--ANFWGHKTKEVLFKNILLDDIRKITAEQAVGG +623
IS+ GII G++ GGF G ++ IF+NIK+ D+ I GGN GGFI AN W + F+NI +++I KI + +A G
UP..1_0686 +659782 ISVYGGKDKGYGIINGSSGTGGGFIGYIDRSTNTDS-----IFKNIKVADFKTILGGNTYGVGGFIGYANLW--NGINLNFENITIENIDKIESSKAAAG +660079
CPEL_1275 +624 FIARSD-NGKYENITLNNIGEISATRGHDSSggfigiiengefKNIKLNDIDLIK-----FVGNQYYGLFAGEISKGKYENISISNVKNI---DIKNSRF +723
F + D N +NIT+ NIGEI + G + + N + ID I F F IS G Y+NISI N+K + D F
UP..1_0686 +660082 FSSYIDANVNAKNITIKNIGEIYSMSGSVAGFANQILSSYSTIHNFENIMIDGIGNFNLGFQSKGTSAAFTNTISNGTYKNISINNIKKVTFDDFNSGDF +660379
CPEL_1275 +724 GLFAGMIGKSYTPGNSNFKSIIIHDISNIKydgytsggygdpyygymgVFAID-AKNATLENIFISLKGLTISNDYRDDLRFQTAFIYNNESNTAFSDN- +823
LFAG +G + + F+ IIIH + NI+ FA D + N L N++I L G +Y+ ++ A +T F N
UP..1_0686 +660382 SLFAGHVGDANDK--TVFENIIIHGVENIQGRNGKIFS-----------FARDLSGNIELNNVYIFLDG-----NYQGKEQYLFA-------DTRFGLNE +660679
CPEL_1275 +824 NVIFKNVNVYYDKDLFSAYDKVDSGKYQNNVNF-------LQNQYDNFIASAQTATGLQYDKTSNSFQTTTDFKLTDPIFTTIGEGGNNP--NEVKLDEN +923
V F NVNVY +F K Y+ + F L + +FI SAQ TG+QYD+ S SF+TTTDFK+TDP F+TIGEGG + KLDE+
UP..1_0686 +660682 KVSFNNVNVYLKNGVFDRI-KDSEATYHGKITFVKFDENELASKKQDFITSAQATTGIQYDQASKSFKTTTDFKVTDPKFSTIGEGGEGGEGSDAKLDED +660979
CPEL_1275 +924 DLLQEMIKKEIIANITNGKYKLHISDLLKMLEDKANYSNMGEEQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFKGNGFSTKESILK +1023
DLLQE+IK+EII +ITNGKYKL+ISDLLKMLEDKANYS M E+QKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGL TAS DKF+GNGFS K IL
UP..1_0686 +660982 DLLQEIIKEEIINDITNGKYKLQISDLLKMLEDKANYSKMSEDQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLNTASKDKFEGNGFSVKNKILS +661279
CPEL_1275 +1024 QVnnttknikdkinQLNDELKSLANESKGFLKDLIAKQNELDVVIKAYNKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILINTKQNELSTWQN +1123
QVNNTTK IKDKI++L +LK L +ES +L LIAKQN+LD +IKAYN YV LINKGLA KNDPEF+ LKN+IDTLMKDSQ LA LIN Q ELSTWQN
UP..1_0686 +661282 QVNNTTKTIKDKIDKLEKDLKPLVDESNRYLGYLIAKQNKLDNIIKAYNAYVDLINKGLANKNDPEFIALKNQIDTLMKDSQVLADLINENQKELSTWQN +661579
CPEL_1275 +1124 KNNTENFKVIGAFANVVLNTNPKLDQIKGDGGEGEDPNKPELPEIDLEFEQTASLNLIGDesleeeeeeheieeAAITQRARTCIVSDNFKTMNPCVV +1221
NNTENFKV+GAFANV+LNTNP L +I GDGG+GEDPNKP+LPE D++FEQTASLNLIGD +L+E+EE E++E ++ Q+ + CIVSDNFKTMNPC+V
UP..1_0686 +661582 DNNTENFKVVGAFANVILNTNPNLKEITGDGGDGEDPNKPDLPETDMDFEQTASLNLIGDNALDEDEETEEVDETSLMQKGKICIVSDNFKTMNPCIV +661873
CPEL_1275 vs: CD56_03710 in Slaughter Beach (Campylobacter lari strain Slaughter Beach, complete genome.)
Gene length: 3462bp / 1154aa PV: No
Function: hypothetical proteinScore: 3415.00 bits: 1476.93 e-value: 0.000000
length: 1165 gaps: 30 id: 831 positives: 938 coverage: 0.72 query coverage 0.71
CPEL_1275 +24 KKLTNHILLSSIVASLLFSPLAA----ISPNALPSGGKFTHGTSGTITKPNNTTMNIHGNKINSVIQWGGGFNIGNKAQVNFEG--SGKNYLNIAHGTNK +123
KKL NHI+LS + S+L SP+ A + PN LPSGGKFTHGTSGTI N M+I GN NSVIQWGGGF IG AQVNF SG+NYLNIAHGT K
CD56_03710 +698586 KKLANHIILSGVTVSMLLSPMVAADKPLNPNHLPSGGKFTHGTSGTIN-INGNNMDIMGNGKNSVIQWGGGFSIGKDAQVNFGKGQSGQNYLNIAHGTSK +698883
CPEL_1275 +124 STIAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQ-EQGNSFSPVFKPQKAGSVVNMGNINANDVLLIGNKVDIQGGKVG +223
S I G+LNA NNVFLINPNGVIITKTG INANRFVASTSSMS+ DM KFAN+ G SFSPVFKP G VVNMG INAN+VLLIGNKVDIQGGKVG
CD56_03710 +698886 SMIEGLLNAGGNNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMWKFANMKNFNDGLSFSPVFKPN-GGNVVNMGTINANNVLLIGNKVDIQGGKVG +699183
CPEL_1275 +224 NKNSTTHLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDNNNKLTENKVQKIDFKQYLTIDSVGEWVIFANAWNNN +323
NKNSTTHLVGNDLVLNP SFAENKTN +TAL SV ++ASMSAF++G YKFVG D FTLTNY DNNN+ T+N+VQ DFKQYLTIDSV EW IFA+AWNN+
CD56_03710 +699186 NKNSTTHLVGNDLVLNPGSFAENKTNYLTALKSVSIAASMSAFKEGGYKFVGADGFTLTNYIDNNNEETKNQVQIKDFKQYLTIDSVDEWAIFADAWNND +699483
CPEL_1275 +324 KGD---TRKVKEFRLINNIDFNNDFKPEYMVGYVFYDSSKKAYDWSSAFTSTFNGNGYTLSNIKLDTSSYSSTNK--HKDHYVGIFSgvgnggvvknlkv +423
+G TR VKEFRLI++IDF NDFKPEYMVGY D S WS +FTSTFNGNGYTLSNI LD S Y S+N H +Y+GIFSGVGNGGVVKNLKV
CD56_03710 +699486 RGGKDGTRSVKEFRLIDDIDFKNDFKPEYMVGYT--DDS-----WSKSFTSTFNGNGYTLSNIMLDASIYNSSNNKTHGKYYIGIFSGVGNGGVVKNLKV +699783
CPEL_1275 +424 ENIATKGQRATGTIAGASDGGSFYDISMKNIKEVYATNNYAGGFIGLIRGANVGNYERISIDGIEKVYANGYSVVGAGAFTGSLSAGIFKDISINNVGII +523
ENI KG +ATGTIAGAS GSFYDIS+KN+K+V + +AGGF+G+I G+ G YERISI+ + K+ GAG F G S+GIFKDI I I
CD56_03710 +699786 ENINMKGDKATGTIAGASKDGSFYDISVKNVKQVDSVFSHAGGFVGVIDGSKGGSYERISIEELTKIEGEN----GAGGFAGYASSGIFKDINIYRSNSI +700083
CPEL_1275 +524 YGTASGGFAGMAGQAGSLAPNVEKMIFENIKLTDYDAIGGNWTWTGGFIANFWGHKTKEVLFKNILLDDIRKITAEQAVGGFIARSDNGKYENITLNNIG +623
+G SGGF G G+ G+ AP V+K+IFENIKL+D++ IGG WTWTGGFIANFWGHK EV FKNILLDDIRKITAEQ VGGFI +S+ GKYENITLNNIG
CD56_03710 +700086 FGQHSGGFIGYVGKPGTYAPTVDKIIFENIKLSDFEKIGG-WTWTGGFIANFWGHKANEVSFKNILLDDIRKITAEQGVGGFIVKSNAGKYENITLNNIG +700383
CPEL_1275 +624 EISATRGHDSSggfigiiengefKNIKLNDIDLIKFVGNQYYGLFAGEISKGKYENISISNVKNIDIKNSRF-GLFAGMIGKSYTPGNSNFKSIIIHDIS +723
E+SAT G +SSGGFIG+IE+GEFKNIKLNDI+ IKF ++ GLFAGEI KG YENISISN+ ID+ + F LFAG IG SY GNS FK IIIH+I
CD56_03710 +700386 ELSATIGAESSGGFIGLIEDGEFKNIKLNDIEFIKFYEGEFTGLFAGEILKGSYENISISNIDKIDVYDVNFLSLFAGQIGNSYVSGNSTFKNIIIHNIG +700683
CPEL_1275 +724 NIKydgytsggygdpyygymgVFAIDAKNATLENIFISLKGLTISNDYRDDLRFQTAFIYNNESNTAFSDNNVIFK-NVNVYYDKDLFSAYDKVDSGKYQ +823
NIKYDGY SGGYGDPYYG +G+FA AKNATLENIF+SL GLTISND R DLRF+TAFIYNNES+TAFSDNNVIFK N+ +YYDKDLFSAYD KY
CD56_03710 +700686 NIKYDGYVSGGYGDPYYGNIGIFAEQAKNATLENIFVSLDGLTISNDKRKDLRFKTAFIYNNESDTAFSDNNVIFKGNIFLYYDKDLFSAYDNYTDNKYN +700983
CPEL_1275 +824 NNVNFLQNQYDNFIASAQTATGLQYDKTSNSFQTTTDFKLTDPIFTTIGEGGNNP--NEVKLDENDLLQEMIKKEIIANITNGKYKLHISDLLKMLEDKA +923
NN+ F QNQYDNFI SAQ TG+QYD+ S SF+TTTDFK+TDP F+TIGEGG + KLDE+DLLQE+IK+EII +ITNGKYKL+ISDLLKMLEDKA
CD56_03710 +700986 NNLTFSQNQYDNFITSAQATTGIQYDQASKSFKTTTDFKVTDPKFSTIGEGGEGGEGSDAKLDEDDLLQEIIKEEIINDITNGKYKLQISDLLKMLEDKA +701283
CPEL_1275 +924 NYSNMGEEQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFKGNGFSTKESILKQVnnttknikdkinQLNDELKSLANESKGFLKDLI +1023
NYS M E+QKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGL TAS DKF+GNGFS K IL QVNNTTK IKDKI++L +LK L N S G+LKDLI
CD56_03710 +701286 NYSKMSEDQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLNTASKDKFEGNGFSVKNEILSQVNNTTKTIKDKIDKLEKDLKPLVNASNGYLKDLI +701583
CPEL_1275 +1024 AKQNELDVVIKAYNKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILINTKQNELSTWQNKNNTENFKVIGAFANVVLNTNPKLDQIKGDGGEGE +1123
A QN+LD IKAYN YV LINKGLA KNDPEF+ LKN+IDTLMKDSQ LA LIN Q ELSTWQN NNTENFKV+GAFANV+LNTNP L +I GDGG+GE
CD56_03710 +701586 AMQNKLDNAIKAYNAYVDLINKGLANKNDPEFIALKNQIDTLMKDSQVLADLINENQKELSTWQNDNNTENFKVVGAFANVILNTNPNLKEITGDGGDGE +701883
CPEL_1275 +1124 DPNKPELPEIDLEFEQTASLNLIGDesleeeeeeheieeAAITQRARTCIVSDNFKTMNPCVVGG +1188
DPNKP+LPE D++FEQTASLNLIGD +L+E+EE E++E ++ Q+ + CIVSDNFKTMNPC+VGG
CD56_03710 +701886 DPNKPDLPETDMDFEQTASLNLIGDNALDEDEETEEVDETSLMQKGKICIVSDNFKTMNPCIVGG +702078
CPEL_1275 vs: CPEL_1564 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3069bp / 1023aa PV: Yes
Function: hemagglutinin domain-containing proteinScore: 929.00 bits: 404.56 e-value: 0.000000
length: 640 gaps: 75 id: 295 positives: 354 coverage: 0.58 query coverage 0.51
CPEL_1275 +12 GGESNNFDLTPSKKLTNHILLSSIVASLLFSPLAAISPNALPSGGKFTHGTSGTITKPNNTTMNIHGNKINSVIQWGGGFNIGNKAQVNFEGSGKNYLNI +111
GG SNNFDLTPSKKLTNHILLSSIVASLLFSP A LPSGGKFTHGTSGTI N M IHGNK+NSVIQWGGGFNI VNF G KNYLNI
CPEL_1564 +1608523 GGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFA-----LPSGGKFTHGTSGTINVSGNN-MHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNI +1608820
CPEL_1275 +112 AHGTNKSTIAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQ-EQGNSFSPVFKP-QKAGSVVNMGNINANDVLLIGNKVD +211
AHGTNKSTIAGILNA NNVFLINPNGVIITKTGNINANRFVASTSSMSN+DMNKFAN+ EQG SFSPVFKP K G V+NMGNINANDVLLIGNKV
CPEL_1564 +1608223 AHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKVL +1608520
CPEL_1275 +212 IQG-----GKVGN--------KNSTTHLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDNNNKLTENKVQKIDFKQ +311
IQG K N K + HLVGN++ + ++F + ITA + L + + F D F + NY N + N + K
CPEL_1564 +1607923 IQGYLNTKDKTFNQIKAIDEGKKANIHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFD-FIVKNY----NGINHNNTNFSNMK- +1608220
CPEL_1275 +312 YLTIDSVGEWVIFANAWNNNKGDTRKVK-EFRLINNIDFNNDFKPEYMVG--YVFY------DSSKKAYDWSSA------FTSTFNGNGYTLSNIKLDTS +411
Y+ I S +W FA WN D R + E+RLIN+IDF + K G Y Y D K+ + +S FT TF+G GYTL NI +DT+
CPEL_1564 +1607623 YVGIGSDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMIINGNYFTKTFDGQGYTLKNINIDTT +1607920
CPEL_1275 +412 SYSSTNKHKDHYVGIFSgvgnggvvknlkvE--NIATKGQRATGTIAGASDGGSFYDISMKNIKEV-YATNNYAGGFIGLIRGANVGNYERISIDGIEKV +511
K+ +VGIF + N+ I K G G S G+ +IS+ N+ + + GGF G ++ G + IS++ I +
CPEL_1564 +1607323 KL----KYNPSHVGIFGAITSTIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMGYFSFTGGSFIGGFAGSLQD---GIHSNISLNNIGDI +1607620
CPEL_1275 +512 YANGYSVVGAGAFTGSLSAGIFKDISINNVGIIYGT---ASGGFAGMAGQAGSLAPNVEKMIFENIKLTDYDAIGGNWTWTGGFIANFWGHKTKEVLFKN +611
N V G F G L GI+ +IS+NN+G I ++GGFAG AG +EK+ NI Y+ N + G FIA + +V F N
CPEL_1564 +1607023 SVN--NVTFMGGFAGYLQDGIYSNISLNNIGDISVNNVDSTGGFAGYAGIVKICNISLEKI--GNINRIAYNGYEEN-SHVGAFIA-----RVSKVDFSN +1607320
CPEL_1275 +612 ILLDDIRKITAE--------QAVGGFIARSDNG--KYENI +651
I L +I I E GGFI G K+ENI
CPEL_1564 +1606723 IYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGDTKFENI +1606840
Score: 114.00 bits: 52.99 e-value: 0.000000
length: 213 gaps: 36 id: 70 positives: 102 coverage: 0.58 query coverage 0.51
CPEL_1275 +517 GGFAGMAGQAGSLAPNVEKMIFENIKLTDYDAIGGNWTWTGG-FIANFWGHKTKEVLFKNILLDDIRKITAEQA--VGGFIARSDNGKYENITLNNIGEI +616
GGF G++ AG+L NI L++ G + TGG FI F G ++ + NI L++I I+ +GGF +G Y NI+LNNIG+I
CPEL_1564 +1607242 GGFVGLS-YAGALL---------NISLSNM----GYFSFTGGSFIGGFAG-SLQDGIHSNISLNNIGDISVNNVTFMGGFAGYLQDGIYSNISLNNIGDI +1607539
CPEL_1275 +617 SATRGHDSSggfigiiengefKNI---KLNDIDLIKFVG---NQYYGLFAGEISKGKYENISISNVKNI-------DIKNSRFGLFAGMIGKSYTPGNSN +716
S DS+GGF G + NI K+ +I+ I + G N + G F +SK + NI + N+ NI D + G F G + G++
CPEL_1564 +1606942 SVNN-VDSTGGFAGYAGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLKNIGNIFNEAKKNDFLHATAGGFIGYL----MEGDTK +1607239
CPEL_1275 +717 FKSIIIHDISNIK +729
F+ I I NIK
CPEL_1564 +1606642 FENIFIFFNPNIK +1606678
Score: 546.00 bits: 239.34 e-value: 0.000000
length: 616 gaps: 59 id: 232 positives: 305 coverage: 0.58 query coverage 0.51
CPEL_1275 +590 VGGFIARSDNGKYENITLNNIGEISATRGHDSSggfigiiengefKNIKLNDIDLIKFVGNQYYGLFAGEISKGKYENISISNVKNIDIKN-SRFGLFAG +689
+GGF+ S G NI+L N+G S T G GGF G +++G NI LN+I I + G FAG + G Y NIS+ N+ +I + N G FAG
CPEL_1564 +1607245 LGGFVGLSYAGALLNISLSNMGYFSFTGG-SFIGGFAGSLQDGIHSNISLNNIGDISVNNVTFMGGFAGYLQDGIYSNISLNNIGDISVNNVDSTGGFAG +1607542
CPEL_1275 +690 MIGKSYTPGNSNFKSIIIHDISNI-KydgytsggygdpyygymgVFAIDAKNATLENIFISLKGLTISNDYRDDLRFQTA--FI-YNNESNTAFSDNNVI +789
G I + I NI + V +D N L+NI G ++D TA FI Y E +T F +N I
CPEL_1564 +1606945 Y------AGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLKNI-----GNIFNEAKKNDFLHATAGGFIGYLMEGDTKF-ENIFI +1607242
CPEL_1275 +790 FKNVNVYYDKD------LFSAYDKVDSGKYQ-NNVNFLQNQYDNFIASAQTATGLQYDKTSNSFQTTTDF-KLTDPIFTTIGEGGN-----------NPN +889
F N N+ + F A + D Y NN+ + + D +A A TA + T + Q T K + ++ N N
CPEL_1564 +1606645 FFNPNIKIINETGLSGKFFGALN--DKATYTFNNIHIYHHEKD--LANA-TADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTIPNKPSDN +1606942
CPEL_1275 +890 EVKLDENDLLQEMIKKEIIANITNGK-----YKLHISDLLKMLEDKANYSNMGEEQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFK +989
+V L +DL ++++ K II ++ N Y L++ +LL ML+DKANYSNM E QKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTAS DKF
CPEL_1564 +1606345 DVILASDDLYKDIVDK-IITDLYNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASKDKFD +1606642
CPEL_1275 +990 GNGFSTKESILKQVnnttknikdkinQLNDELKSLANESKGFLKDLIAKQNELDVVIKAYNKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILI +1089
K ++L N KN D N L ++LK L S L L Q +L + I YN YV IN+ + KN+ LK ++D L S +LA I
CPEL_1564 +1606045 AEALNLKNTLLANTNKVIKNKNDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTI +1606342
CPEL_1275 +1090 NTKQNELSTWQNK---NNTENFKVIGAFANVVLNTNPKLDQIKGDGGEGEDPNKPELPEIDLEFEQTASLNLIGDesleeeeeeheieeAAITQRARTCI +1189
Q +L TWQ + + F +IG F N+ L T P L+++ G D + +I +QT + EEEE +EI+EAA+TQRARTCI
CPEL_1564 +1605745 ANNQIKLETWQKQASDKSNQQFNIIGKFDNIAL-TIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKY-------EEEETQEIDEAALTQRARTCI +1606042
CPEL_1275 +1190 VSDNFKTMNPCVVGGY +1205
VSDNFKTMNPCVV Y
CPEL_1564 +1605445 VSDNFKTMNPCVVESY +1605490
CPEL_1275 vs: CAQ16704_0012 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2751bp / 917aa PV: Yes
Function: hemagglutination domain proteinScore: 766.00 bits: 334.24 e-value: 0.000000
length: 579 gaps: 98 id: 250 positives: 295 coverage: 0.51 query coverage 0.40
CPEL_1275 +24 KKLTNHILLSSIVASLLFSPLAAISPNALPSGGKFTHGTSGTITKPNNTTMNIHG---NKINSVIQWGGGFNIGNKAQVNFE--GSGKNYLNIAHGTNKS +123
KKLTNHI LS I SLLFSPL AI PN LPSGGKFTHGT+G+I N TMNI G NK N VIQWGGGFNIG AQV F G NYLNIAHGT KS
CA..4_0012 +11530 KKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFTHGTTGSI-NINGNTMNINGTTPNK-NHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKS +11827
CPEL_1275 +124 TIAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQ-EQGNSFSPVFKPQKAGSVVNMGNINANDVLLIGNKVDIQGGKVGN +223
TIAG+LNA NNVFLINPNGVIITKTG INANRFVASTSSM M FAN+ G SFSPVFKP K G VVNMGNI A+++ L GNKV + N
CA..4_0012 +11830 TIAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSENYNN +12127
CPEL_1275 +224 KNSTT----HLVGNDLVLNPSSFAENKTNNITALNSVELSASMSAFEDGEYKFVGGDSFTLTNYTDNNNKLTENKVQKIDFKQYLTIDSVGEWVIFANAW +323
N L GN++ ++ +S N + LN V+ A+ + + SF++ NN ++ Y+ I S +W FA W
CA..4_0012 +12130 INKVMAKNIKLEGNEVYVDVASI---DGNTLQGLN-VDAKTKGNAYLNANGYYYNPYSFSVFSKISGNNNFKKD--------AYVGIGSDVDWWHFAKGW +12427
CPEL_1275 +324 NNNKGDTR-KVKEFRLINNIDF---NNDFKPEYMVGYVFYDSSKKAYDWSSAFTSTFNGNGYTLSNIKLDTSSYSSTNKHKDHYVGIFSgvgnggvvknl +423
N NK R E+RL +IDF NN Y + + S YD FT TF+G GYTL NI +DTSS SS + YVGIF
CA..4_0012 +12430 NENKAGFRTSASEYRLTKDIDFGGNNNKNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSS----ESEYVGIF------------ +12727
CPEL_1275 +424 kvENIATKGQRATGTIAGASDGGSFYDISMKNIKEVY-----ATNNYAGGFIGLIRGANVGNYERISIDGIEKVYANGYS----VVGAGAFTGSLSAGIF +523
G D ++KNI Y TN YAGGF G G + IS++ I + N V G F G G F
CA..4_0012 +12730 ----------------------GYINDATIKNINVDYMGGGIRTNTYAGGFAGSASGT----FSNISLNNIGNISGNSNGDQSFVAGFAGFAG----GTF +13027
CPEL_1275 +524 KDISINNVGIIYGTASGGFAG-MAGQAGSLAPNVEKMIFENIKLTDYDAIGGNWTWTGGFIANFWGHKTKEVLFKNILL +602
+IS+NN+G I G +GGFAG +AG IF NI L D I GN + G F G + FKNI +
CA..4_0012 +13030 SNISLNNIGDISGYHAGGFAGWLAG------------IFTNISLHDIGNISGNKSH--GIAGGFAGSYENDSTFKNIYI +13264
Score: 551.00 bits: 241.50 e-value: 0.000000
length: 611 gaps: 95 id: 222 positives: 295 coverage: 0.51 query coverage 0.40
CPEL_1275 +570 EVLFKNILLDDIRK-ITAEQAVGGFIARSDNGKYENITLNNIGEISATRGHDSSggfigiiengefKNIKLNDIDLIKFVGNQYYGLFAGEISKGKYENI +669
+ KNI +D + I GGF A S G + NI+LNNIG IS D S + F G FAG G + NI
CA..4_0012 +12652 DATIKNINVDYMGGGIRTNTYAGGF-AGSASGTFSNISLNNIGNISGNSNGDQSF--------------------VAGFAG------FAG----GTFSNI +12949
CPEL_1275 +670 SISNVKNIDIKNSRFGLFAGMIGKSYTPGNSNFKSIIIHDISNIKydgytsggygdpyygymgVFAIDAKN-ATLENIFISL-KGLTISNDYRDDL---R +769
S+ N+ DI G FAG + +T I +HDI NI + G FA +N +T +NI+I IS
CA..4_0012 +12952 SLNNIG--DISGYHAGGFAGWLAGIFT-------NISLHDIGNISGNKSHGIAGG---------FAGSYENDSTFKNIYIFFNPNAKISGRAPGKFFGQP +13249
CPEL_1275 +770 FQTAFIYNNESNTAFSDNNVIFKNVNVYYDKDLF-SAYDKVDSGKYQNNVNFLQNQYDNFIASAQTATGLQYDKTSNSFQTTTDFKLTDPIFTTIGEGGN +869
F TA + N S N++ N D++ DK+ Y NN N Q Y +F++ A T + + + TT LTD
CA..4_0012 +13252 FWTAHL--NNIHIYHSRNDL----TNAITDRNYWGNTNDKIQIHTY-NNSN-QQSSYQDFLSKANTIS-----RPTPPSNPTTPPNLTDT---------- +13549
CPEL_1275 +870 NPNEVKLDENDLLQEMIKKEIIANITNGKYKLHISDLLKMLEDKANYSNMGEEQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASNDKFKGN +969
VKLDENDL Q ++ EII +ITN Y++ I++LL ML++K NY+NM EEQK F+AKYFL G+ TKALEVVQSLDFLLAYE NGLSTASNDKF+ N
CA..4_0012 +13552 ---NVKLDENDLHQNIVN-EIINDITNNHYEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEAN +13849
CPEL_1275 +970 GFSTKESILKQVnnttknikdkinQLNDELKSLANESKGFLKDLIAKQNELDVVIKAYNKYVVLINKGLAHKNDPEFVILKNKIDTLMKDSQDLAILINT +1069
G S K +++ KN D + L +LK L + + DL Q +L I YN YV +N+ + KND LK ++D L S++L IN
CA..4_0012 +13852 GLSVKNTLVTNTKKVIKNKNDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASIND +14149
CPEL_1275 +1070 KQNELSTWQNKNNTE---NFKVIGAFANVVLNTNPKLDQIKGDGGEGEDPNKPELPEIDLEFEQTASLNLIGDesleeeeeeheieeAAITQRARTCIVS +1169
Q L TWQ K T+ FK+ G F N+ L T P LD++ +G E ED K + + +QT + EE E+ E+EE A+ Q+ + CIVS
CA..4_0012 +14152 NQELLQTWQSKTSTDSNNHFKIKGEFKNLALLT-PNLDEVIVNGNENEDYKKVSRQVANAQ-KQTPTF-------EYEENEKEEVEETALMQKGKICIVS +14449
CPEL_1275 +1170 DNFKTMNPCVV +1180
DNFKTMNPC+V
CA..4_0012 +14452 DNFKTMNPCIV +14482