YSS_07240 vs: Cj1318 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 2923.00 bits: 1264.70 e-value: 0.000000
length: 649 gaps: 1 id: 631 positives: 634 coverage: 0.97 query coverage 0.97

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenlly-QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG L QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
Cj1318 +1246678 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1246975

YSS_07240 +101 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +200
LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
Cj1318 +1246978 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1247275

YSS_07240 +201 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +300
IILRNGNDP DALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT
Cj1318 +1247278 IILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1247575

YSS_07240 +301 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQ +400
AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQ
Cj1318 +1247578 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQ +1247875

YSS_07240 +401 NSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF +500
NSANYESQMYEHILT AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF
Cj1318 +1247878 NSANYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF +1248175

YSS_07240 +501 LLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +600
LLKAYYKVYQSIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI
Cj1318 +1248178 LLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +1248475

YSS_07240 +601 LWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +649
LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
Cj1318 +1248478 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1248622

YSS_07240 vs: Cj1333 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: PseD protein

Score: 2111.00 bits: 914.43 e-value: 0.000000
length: 657 gaps: 17 id: 477 positives: 527 coverage: 0.73 query coverage 0.73

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL N+ LKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
Cj1333 +1259689 MTFTPTQKELFNKNIEALSNLFLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1259986

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQ ARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKL ++FK+
Cj1333 +1259989 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILQTSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDS +1260286

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYV LER LT+
Cj1333 +1260289 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +1260586

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+F+ VHP +YL+ RN ++ +F Y+ L DF Y +G SVA LA +L HKNI+ IGQDLAYA++G SH DY
Cj1333 +1260589 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDY +1260886

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + T AYG NGKVE+ +W LF+ FE ++ + ITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNK
Cj1333 +1260889 SNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNK +1261186

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKVYQSIKHCRDFS ++KI+ ++ L +E+ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTK
Cj1333 +1261189 QNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTK +1261486

YSS_07240 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +657
EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
Cj1333 +1261489 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1261657

YSS_07240 vs: Cj1335 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1948bp / 649aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 156.00 bits: 71.11 e-value: 0.000000
length: 54 gaps: 0 id: 54 positives: 54 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIK +54
MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIK
Cj1335 +1263507 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIK +1263666

Score: 2784.00 bits: 1204.74 e-value: 0.000000
length: 582 gaps: 0 id: 571 positives: 574 coverage: 0.96 query coverage 0.96

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF
Cj1335 +1263706 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +1264003

YSS_07240 +167 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +266
SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDP DALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS
Cj1335 +1264006 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +1264303

YSS_07240 +267 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTL +366
KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTL
Cj1335 +1264306 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTL +1264603

YSS_07240 +367 SYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +466
SYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILT AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE
Cj1335 +1264606 SYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +1264903

YSS_07240 +467 KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLY +566
KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLY
Cj1335 +1264906 KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLY +1265203

YSS_07240 +567 EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
Cj1335 +1265206 EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1265449

YSS_07240 vs: CJJ81176_1336 in 81-176 (Campylobacter jejuni subsp. jejuni 81-176, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD

Score: 1677.00 bits: 727.22 e-value: 0.000000
length: 660 gaps: 23 id: 398 positives: 492 coverage: 0.61 query coverage 0.61

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL+NI LKESLKEIKSSKF+LILGKDNLDINL++TS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
CJ..6_1336 +1249415 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDNLDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1249712

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIW +FHILDFSNELQ L+++ + L D + F QFSRIYFLEL+S YYER+ E++L+LN + K
CJ..6_1336 +1249715 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIK +1250012

YSS_07240 +201 NIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEL +300
I++ GND +D L GI++F+YNL +++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADS+YPILAKH IKPDYVCMLER ++
CJ..6_1336 +1250015 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1250312

YSS_07240 +301 TAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP +400
++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
CJ..6_1336 +1250315 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1250612

YSS_07240 +401 DDYQNSANYES--QMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +500
D+ +E Q E + T+ AYGG G+VE+ W LF+ FE + + + I YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
CJ..6_1336 +1250615 KDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINI--YNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLN +1250912

YSS_07240 +501 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
+NKQNE +LKAY K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
CJ..6_1336 +1250915 INKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLN +1251212

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ R++
CJ..6_1336 +1251215 PKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1251392

YSS_07240 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 2887.00 bits: 1249.17 e-value: 0.000000
length: 648 gaps: 0 id: 624 positives: 636 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
A911_06490 +1262965 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1263262

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+LENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
A911_06490 +1263265 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1263562

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
A911_06490 +1263565 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1263862

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+FICAGVVHPKAIEYLK RNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
A911_06490 +1263865 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1264162

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
A911_06490 +1264165 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1264462

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
A911_06490 +1264465 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1264762

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
A911_06490 +1264765 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1264906

YSS_07240 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2217.00 bits: 960.15 e-value: 0.000000
length: 654 gaps: 14 id: 491 positives: 541 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
A911_06480 +1259156 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1259453

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
A911_06480 +1259456 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1259753

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER +TA
A911_06480 +1259756 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1260053

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
A911_06480 +1260056 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1260353

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
A911_06480 +1260356 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +1260653

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
A911_06480 +1260656 FLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1260953

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
A911_06480 +1260956 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1261115

YSS_07240 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2574.00 bits: 1114.15 e-value: 0.000000
length: 650 gaps: 6 id: 574 positives: 595 coverage: 0.89 query coverage 0.88

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ16_07340 +1354370 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1354667

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQNARL+VL +KL+ QDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
PJ16_07340 +1354670 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1354967

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA
PJ16_07340 +1354970 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1355267

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN +I + L FP YI LK F + SVAH +L+ L HKNIIFIGQDLAYAENGNSHPDDY
PJ16_07340 +1355270 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +1355567

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG +++TH W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
PJ16_07340 +1355570 QNSANYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1355867

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQS+YL LNEKEE +NLAIEKID FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS
PJ16_07340 +1355870 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +1356167

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ16_07340 +1356170 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1356317

YSS_07240 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2228.00 bits: 964.90 e-value: 0.000000
length: 654 gaps: 14 id: 494 positives: 540 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
PJ16_07410 +1367385 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1367682

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
PJ16_07410 +1367685 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1367982

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
PJ16_07410 +1367985 IISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1368282

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
PJ16_07410 +1368285 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1368582

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
PJ16_07410 +1368585 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1368882

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
PJ16_07410 +1368885 FLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1369182

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ16_07410 +1369185 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1369344

YSS_07240 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2372.00 bits: 1027.02 e-value: 0.000000
length: 653 gaps: 8 id: 534 positives: 573 coverage: 0.82 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ16_07420 +1371194 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1371491

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
PJ16_07420 +1371494 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1371791

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYV LER LT+
PJ16_07420 +1371794 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1372091

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKD++F+C ++P+ I+YL+ R ++T + +F INL + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
PJ16_07420 +1372094 EFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1372391

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + AYGGNGKVE+ IW +F+ +N + ++ + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
PJ16_07420 +1372394 KNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTI---SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1372691

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEE +NLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF
PJ16_07420 +1372694 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +1372991

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ16_07420 +1372994 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1373150

YSS_07240 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2863.00 bits: 1238.82 e-value: 0.000000
length: 648 gaps: 0 id: 618 positives: 630 coverage: 0.95 query coverage 0.95

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ17_06980 +1346475 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1346772

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
PJ17_06980 +1346775 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1347072

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA
PJ17_06980 +1347075 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1347372

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDIVF+CAGVVHPKAIEYLKG+ +ITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
PJ17_06980 +1347375 EFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGKTFIITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1347672

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
PJ17_06980 +1347675 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1347972

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
PJ17_06980 +1347975 LKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1348272

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWME+VRR
PJ17_06980 +1348275 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMEKVRR +1348416

YSS_07240 vs: PJ17_07050 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2122.00 bits: 919.17 e-value: 0.000000
length: 657 gaps: 17 id: 481 positives: 529 coverage: 0.74 query coverage 0.74

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FTPTQKELFNKNIE+L NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
PJ17_07050 +1359494 MIFTPTQKELFNKNIESLSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1359791

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL +K + QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKL ++FK+
PJ17_07050 +1359794 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDS +1360091

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYV LER LT+
PJ17_07050 +1360094 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +1360391

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+F+ VHP +YL+ RN ++ +F Y+ L DF Y +G SVA LA +L HKNI+ IGQDLAYA++G SH DY
PJ17_07050 +1360394 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDY +1360691

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + T AYG NGKVE+ +W LF+ FE ++ + ITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNK
PJ17_07050 +1360694 SNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNK +1360991

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKVYQSIKHCRDFS ++KI+ ++ L +E+ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTK
PJ17_07050 +1360994 QNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTK +1361291

YSS_07240 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +657
EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ17_07050 +1361294 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1361462

YSS_07240 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2607.00 bits: 1128.39 e-value: 0.000000
length: 650 gaps: 6 id: 578 positives: 599 coverage: 0.89 query coverage 0.89

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ17_07060 +1363312 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1363609

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHIL+FS ELQ ARLMVLENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
PJ17_07060 +1363612 FKALLQNKNHQHIVVFEKDIEIIWIMFHILNFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1363909

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA
PJ17_07060 +1363912 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1364209

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFDKDIVF+CAGVVHPKAIEYLKGRN +I + L FP YI LK F + SVAH YL+ +LSHKNIIFIGQDLAYAENGNSHPDDY
PJ17_07060 +1364212 EFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSHPDDY +1364509

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
PJ17_07060 +1364512 QNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +1364809

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKVYQSIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS
PJ17_07060 +1364812 FLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +1365109

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ17_07060 +1365112 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1365259

YSS_07240 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2217.00 bits: 960.15 e-value: 0.000000
length: 654 gaps: 14 id: 491 positives: 541 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N135_01421 +1337388 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1337685

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N135_01421 +1337688 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1337985

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER +TA
N135_01421 +1337988 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1338285

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
N135_01421 +1338288 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1338585

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
N135_01421 +1338588 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +1338885

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
N135_01421 +1338888 FLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1339185

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N135_01421 +1339188 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339347

YSS_07240 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2887.00 bits: 1249.17 e-value: 0.000000
length: 648 gaps: 0 id: 624 positives: 636 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N135_01423 +1341197 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1341494

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+LENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N135_01423 +1341497 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1341794

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
N135_01423 +1341797 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1342094

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+FICAGVVHPKAIEYLK RNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
N135_01423 +1342097 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1342394

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
N135_01423 +1342397 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1342694

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
N135_01423 +1342697 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1342994

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N135_01423 +1342997 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343138

YSS_07240 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2217.00 bits: 960.15 e-value: 0.000000
length: 654 gaps: 14 id: 491 positives: 541 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N564_02285 +1299219 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1299516

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N564_02285 +1299519 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1299816

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER +TA
N564_02285 +1299819 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1300116

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
N564_02285 +1300119 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1300416

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
N564_02285 +1300419 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +1300716

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
N564_02285 +1300719 FLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1301016

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N564_02285 +1301019 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1301178

YSS_07240 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2887.00 bits: 1249.17 e-value: 0.000000
length: 648 gaps: 0 id: 624 positives: 636 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N564_02295 +1303028 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1303325

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+LENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N564_02295 +1303328 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1303625

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
N564_02295 +1303628 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1303925

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+FICAGVVHPKAIEYLK RNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
N564_02295 +1303928 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1304225

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
N564_02295 +1304228 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1304525

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
N564_02295 +1304528 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1304825

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N564_02295 +1304828 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1304969

YSS_07240 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2887.00 bits: 1249.17 e-value: 0.000000
length: 648 gaps: 0 id: 624 positives: 636 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N565_02385 +1341584 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1341881

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+LENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N565_02385 +1341884 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1342181

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
N565_02385 +1342184 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1342481

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+FICAGVVHPKAIEYLK RNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
N565_02385 +1342484 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1342781

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
N565_02385 +1342784 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1343081

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
N565_02385 +1343084 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1343381

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N565_02385 +1343384 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343525

YSS_07240 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2217.00 bits: 960.15 e-value: 0.000000
length: 654 gaps: 14 id: 491 positives: 541 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N565_02375 +1337775 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1338072

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N565_02375 +1338075 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1338372

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER +TA
N565_02375 +1338375 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1338672

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
N565_02375 +1338675 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1338972

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
N565_02375 +1338975 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +1339272

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
N565_02375 +1339275 FLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1339572

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N565_02375 +1339575 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339734

YSS_07240 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2887.00 bits: 1249.17 e-value: 0.000000
length: 648 gaps: 0 id: 624 positives: 636 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N755_02445 +1341567 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1341864

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+LENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N755_02445 +1341867 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1342164

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
N755_02445 +1342167 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1342464

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+FICAGVVHPKAIEYLK RNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
N755_02445 +1342467 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1342764

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
N755_02445 +1342767 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1343064

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
N755_02445 +1343067 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1343364

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N755_02445 +1343367 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343508

YSS_07240 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2217.00 bits: 960.15 e-value: 0.000000
length: 654 gaps: 14 id: 491 positives: 541 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N755_02435 +1337758 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1338055

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
N755_02435 +1338058 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1338355

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER +TA
N755_02435 +1338358 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1338655

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
N755_02435 +1338658 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1338955

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
N755_02435 +1338958 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +1339255

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
N755_02435 +1339258 FLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1339555

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N755_02435 +1339558 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339717

YSS_07240 vs: PJ18_06860 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2760.00 bits: 1194.39 e-value: 0.000000
length: 648 gaps: 0 id: 600 positives: 619 coverage: 0.92 query coverage 0.92

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ18_06860 +1302529 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1302826

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
PJ18_06860 +1302829 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1303126

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
PJ18_06860 +1303129 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1303426

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDF EFD+DIVFICAGVVHPKAIEYLKGRNLVITQKVL PYYINLKDFSYAAVG SVAH L+YLATYL HKNIIFIGQDLAYAENGNSHPDDYQN
PJ18_06860 +1303429 EFFNHDFREFDRDIVFICAGVVHPKAIEYLKGRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQN +1303726

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILT AYG +V+TH+IW+LFKN+FENE+IPNT KMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
PJ18_06860 +1303729 SANYESQMYEHILTKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1304026

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAFNKSIL
PJ18_06860 +1304029 LKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSIL +1304326

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ18_06860 +1304329 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1304470

YSS_07240 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2230.00 bits: 965.76 e-value: 0.000000
length: 654 gaps: 14 id: 497 positives: 544 coverage: 0.77 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
PJ18_06850 +1298720 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1299017

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQN+RLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
PJ18_06850 +1299020 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1299317

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
PJ18_06850 +1299320 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1299617

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDF EFDKDI FI VVHP AI YL K N + +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPDDY
PJ18_06850 +1299620 EFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1299917

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ +E ILT AYGG G+V+TH +WL+FK E ++ + + YNCTEGGARI+G IEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
PJ18_06850 +1299920 QNSATYESKAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNE +1300217

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
PJ18_06850 +1300220 FLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1300517

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ18_06850 +1300520 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1300679

YSS_07240 vs: PJ18_06785 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2362.00 bits: 1022.70 e-value: 0.000000
length: 653 gaps: 8 id: 533 positives: 569 coverage: 0.82 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ18_06785 +1284798 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1285095

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
PJ18_06785 +1285098 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1285395

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV LER LT+
PJ18_06785 +1285398 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1285695

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+D++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
PJ18_06785 +1285698 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1285995

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
PJ18_06785 +1285998 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1286295

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAF
PJ18_06785 +1286298 QNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAF +1286595

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ18_06785 +1286598 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1286754

YSS_07240 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2574.00 bits: 1114.15 e-value: 0.000000
length: 650 gaps: 6 id: 574 positives: 595 coverage: 0.89 query coverage 0.88

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ19_07340 +1352981 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1353278

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQNARL+VL +KL+ QDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
PJ19_07340 +1353281 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1353578

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA
PJ19_07340 +1353581 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1353878

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN +I + L FP YI LK F + SVAH +L+ L HKNIIFIGQDLAYAENGNSHPDDY
PJ19_07340 +1353881 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +1354178

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG +++TH W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
PJ19_07340 +1354181 QNSANYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1354478

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQS+YL LNEKEE +NLAIEKID FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS
PJ19_07340 +1354481 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +1354778

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ19_07340 +1354781 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1354928

YSS_07240 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2372.00 bits: 1027.02 e-value: 0.000000
length: 653 gaps: 8 id: 534 positives: 573 coverage: 0.82 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ19_07420 +1369805 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1370102

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
PJ19_07420 +1370105 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1370402

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYV LER LT+
PJ19_07420 +1370405 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1370702

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKD++F+C ++P+ I+YL+ R ++T + +F INL + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
PJ19_07420 +1370705 EFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1371002

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + AYGGNGKVE+ IW +F+ +N + ++ + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
PJ19_07420 +1371005 KNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTI---SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1371302

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEE +NLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF
PJ19_07420 +1371305 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +1371602

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ19_07420 +1371605 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1371761

YSS_07240 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2228.00 bits: 964.90 e-value: 0.000000
length: 654 gaps: 14 id: 494 positives: 540 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
PJ19_07410 +1365996 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1366293

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
PJ19_07410 +1366296 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1366593

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
PJ19_07410 +1366596 IISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1366893

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
PJ19_07410 +1366896 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1367193

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
PJ19_07410 +1367196 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1367493

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
PJ19_07410 +1367496 FLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1367793

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
PJ19_07410 +1367796 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1367955

YSS_07240 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor

Score: 2257.00 bits: 977.41 e-value: 0.000000
length: 654 gaps: 11 id: 513 positives: 553 coverage: 0.79 query coverage 0.79

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL N+ LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGIL
JJ..7_0374 +331842 MTFIPTQKELFNKNIEALSNVFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGIL +332139

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLM+LENDKLQTQDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVL++N KLAE FK +
JJ..7_0374 +331542 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETFKKV +331839

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GND DALQGIEQFVYNLP MITHPSY+ELL+KRK LSDTAIIVSTGPSLTKQLPLLKKYASKAT+FCADS+YPILAK+GI+PDYV LER T+
JJ..7_0374 +331242 ILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVLETS +331539

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DF EFDKDI+F+ HP +YL+ RN ++ F Y+ L DF Y +G SVA +LA L +KNII IGQDLAY+++G SHPD++
JJ..7_0374 +330942 EFFNNDFKEFDKDILFVLKSYAHPHTTKYLQKNNRNFMLVSTYANFINYLKLDDFGYFTMGFSVANMAYHLALLLQYKNIILIGQDLAYSKDGSSHPDEH +331239

YSS_07240 +401 ----QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +500
+ E+ Y+ + TTAYGG G V T+ +W LF+ FE ++ I TYNCTEGGARIEG IEKPFLWACENLL KDLNKPFEKLEPLSL
JJ..7_0374 +330642 IFGTLDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRSIFEQDIT----NYHIPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEPLSLK +330939

YSS_07240 +501 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV QSIKHCRDFSKILSNDFE IQS+YL LNEKEE +NLAI KIDEFKNKLE+IKQMQDLYEIL PL TQFELNLARIYVLNPKTKED
JJ..7_0374 +330342 KQNEFLLKAYYKVCQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDV +330639

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKLDK MERVRR
JJ..7_0374 +330042 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR +330201

YSS_07240 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factor

Score: 2134.00 bits: 924.35 e-value: 0.000000
length: 654 gaps: 16 id: 477 positives: 527 coverage: 0.74 query coverage 0.73

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFT QKELFNKNIEAL NI LKESLK+IKSSKFELILGKD LDINLK+TS + L+++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+L
JJ..7_0376 +335639 MTFT--QKELFNKNIEALGNIFLKESLKQIKSSKFELILGKDKLDINLKNTS--------DNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGVL +335936

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
JJ..7_0376 +335339 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +335636

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK LSDTAIIVSTGPSL KQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER+E TA
JJ..7_0376 +335039 ILSHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSEFTA +335336

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFDKDI FI VVHP AI YL K + + +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPDDY
JJ..7_0376 +334739 EFFNHDFGEFDKDICFIIKSVVHPNAIHYLNKKTDDFTLVSTYASFINYVKLDDFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +335036

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ +E ILT AYGG G+V+TH IWL+FK E ++ + + YNCTEGGARIEG IEKPFLWACENLL KDLNKPFEKLEPLSL KQNE
JJ..7_0376 +334439 QNSATYESKAHEPILTKAYGGKGEVKTHHIWLMFKQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPLSLKKQNE +334736

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQM----QDLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDF ++KI+ ++ L +E+ L + I I ++ +DL +IL PL TQFELNLARIYVLNPKTKED
JJ..7_0376 +334139 FLLKAYYKVCKSIEHCRDFNDKFIKSYKKIKNSFMSLQNSQENEILVKKIIKNIDKIKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDV +334436

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKL+KWMERVRR
JJ..7_0376 +333839 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLNKWMERVRR +333998

YSS_07240 vs: JJD26997_0396 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1933bp / 644aa PV: Yes
Function: No annotation data

Score: 147.00 bits: 67.23 e-value: 0.000000
length: 54 gaps: 0 id: 50 positives: 51 coverage: 0.86 query coverage 0.85

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIK +54
MTFTPTQKELFNKNIEAL NI LKESLK+IKSSKFELILGKD LDINLKDTSIK
JJ..7_0396 +352487 MTFTPTQKELFNKNIEALSNIFLKESLKQIKSSKFELILGKDKLDINLKDTSIK +352646

Score: 2445.00 bits: 1058.51 e-value: 0.000000
length: 582 gaps: 4 id: 504 positives: 531 coverage: 0.86 query coverage 0.85

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +166
QDPIKELQTMLNTY DKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLM+LENDKLQTQDY ELCSSKPFFQF
JJ..7_0396 +352288 QDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELCSSKPFFQF +352585

YSS_07240 +167 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +266
SRIYFLELMSHYYERFHEDVL++N KLAENFK +IL GND DALQGIEQFVYNLP MITHPSY+ELL+KRK LSDTAIIVSTGPSLTKQLPLLKKYAS
JJ..7_0396 +351988 SRIYFLELMSHYYERFHEDVLKINHKLAENFKKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYAS +352285

YSS_07240 +267 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTL +366
KAT+FCADS+YPILAK+GI+PDYVCMLERT+ TAEFFNHDFGEFD+DIVFICAGVVHPKAIEYLKGRNLVITQKVL FPYYINLKDFSYAAVG SVAH
JJ..7_0396 +351688 KATLFCADSAYPILAKQGIRPDYVCMLERTDFTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLKGRNLVITQKVLTFPYYINLKDFSYAAVGFSVAHMS +351985

YSS_07240 +367 SYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +466
+L+ L HKNII IGQDLAYA+NGNSHPDDYQNSA YESQ YE ILT AYGG G+V+TH +W+ FK E +I + I TYNCTEGGARIEGTIE
JJ..7_0396 +351388 YFLSVLLNHKNIILIGQDLAYAKNGNSHPDDYQNSATYESQTYEPILTKAYGGKGEVKTHEVWIFFKQMLETMII----EYSIPTYNCTEGGARIEGTIE +351685

YSS_07240 +467 KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLY +566
KPFLWACENLL KDLNKPFEKLEPLSL KQNEFLLKAYYKV +SI+HC+DFSKILSNDFE IQS+YL LNEKEE +NLAI KIDEFKNKLE+IKQMQDLY
JJ..7_0396 +351088 KPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKSIEHCKDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLY +351385

YSS_07240 +567 EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
EIL PL TQFELNLARIYVLNPKTKED FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKLDK MERVRR
JJ..7_0396 +350788 EILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR +351031

YSS_07240 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factor

Score: 2158.00 bits: 934.70 e-value: 0.000000
length: 657 gaps: 9 id: 495 positives: 542 coverage: 0.75 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
BN.._13180 +1295983 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1296280

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLE L + ++ CSSKPFFQFSRIYFLELMSHYYERFH+D+L LNKKLAENFKN
BN.._13180 +1296283 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNS +1296580

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK++SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV LER LT+
BN.._13180 +1296583 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1296880

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+F+ VHP +YL+ RN ++ +F Y+ L DF Y +G SVA LA +L HKNI+ IGQDLAY ++G SH DY
BN.._13180 +1296883 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSHTKDY +1297180

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + T AYGGNGKV++ IW LF+ FE +++ ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
BN.._13180 +1297183 SNLDKHEGHFQRDKNKYTTQAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1297480

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKVYQSIKHCRDF + KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTK
BN.._13180 +1297483 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYNKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTK +1297780

YSS_07240 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +657
EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEK+KERKLDKWMERVRR
BN.._13180 +1297783 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR +1297951

YSS_07240 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 2809.00 bits: 1215.52 e-value: 0.000000
length: 648 gaps: 0 id: 606 positives: 623 coverage: 0.93 query coverage 0.93

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
BN.._13200 +1299825 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1300122

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLE L + ++ CSSKPFFQFSRIYFLELMSHYYERFH+D+L LNKKLAENFKN
BN.._13200 +1300125 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNS +1300422

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK++SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
BN.._13200 +1300425 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1300722

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+F+CAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYL HKNIIFIGQDLAYAENGNSHPDDYQN
BN.._13200 +1300725 EFFNHDFGEFDKDIIFVCAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQN +1301022

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SA YESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKM ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
BN.._13200 +1301025 SATYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1301322

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
BN.._13200 +1301325 LKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1301622

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEK+KERKLDKWMERVRR
BN.._13200 +1301625 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR +1301766

YSS_07240 vs: M635_02360 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2137.00 bits: 925.64 e-value: 0.000000
length: 657 gaps: 17 id: 485 positives: 532 coverage: 0.75 query coverage 0.75

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
M635_02360 +444737 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +445034

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQ ARLM+L +K + QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKL ++FK+
M635_02360 +445037 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDS +445334

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYV LER LT+
M635_02360 +445337 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +445634

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDIVF+ VHP +YL+ RN ++ +F Y+ L DF Y +G SVA LA +L HKNI+ IGQDLAYA++G SH DY
M635_02360 +445637 EFFNNDFGEFDKDIVFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDY +445934

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + T AYG NGKVE+ +W LF+ FE ++ + ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
M635_02360 +445937 SNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +446234

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKVYQSIKHCRDFS ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTK
M635_02360 +446237 QNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +446534

YSS_07240 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +657
EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
M635_02360 +446537 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +446705

YSS_07240 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD protein

Score: 2442.00 bits: 1057.21 e-value: 0.000000
length: 584 gaps: 6 id: 507 positives: 532 coverage: 0.86 query coverage 0.78

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL +KL+ QDY ELCSSKPFFQF
M635_02285 +431919 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQF +432216

YSS_07240 +167 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +266
SRIYFLELMSHYYERFHEDVLELNKKLAENFKN I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA
M635_02285 +432219 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYAN +432516

YSS_07240 +267 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAH +366
KATIFCADSSYPILAKHGIKPDYVCMLERTE+TAEFFNHDFGEFDKD++F+CAGVVHPKAIEYLKGRN +IT + L FP YI LK F + SVAH
M635_02285 +432519 KATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAH +432816

YSS_07240 +367 TLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGT +466
+L+ L HKNIIFIGQDLAYAENGNSHPDDYQNSANYE QMYEHILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGT
M635_02285 +432819 MSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSANYENQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGT +433116

YSS_07240 +467 IEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQD +566
IEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEE +NLAIEKID+FKNKLE+IKQMQD
M635_02285 +433119 IEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQD +433416

YSS_07240 +567 LYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
LYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
M635_02285 +433419 LYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +433668

YSS_07240 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2383.00 bits: 1031.76 e-value: 0.000000
length: 651 gaps: 14 id: 524 positives: 559 coverage: 0.82 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
M635_02370 +448555 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +448852

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFS ELQ ARLM+L L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
M635_02370 +448855 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSSELQSARLMILNTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +449152

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYV LER LT+
M635_02370 +449155 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +449452

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDIVF+CAGVVHPK IEYLK + +ITQK+LAFPYYINLK+F YAA+G SVAH AT+L +KNIIFIGQDLAYAE+G SH DY N
M635_02370 +449455 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKILAFPYYINLKNFCYAAIGFSVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSHTKDYSN +449752

YSS_07240 +401 SANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +500
+E + AYGGNGK E+ +W +F+ ++ + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN
M635_02370 +449755 LDKHEGHFQRDKGKFQCLAYGGNGKAESSEVWTMFRFFLQDTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +450052

YSS_07240 +501 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +600
EFLLKAYYKVYQSIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEIL L QFELNLARIYVLNPKTKEDAFNK
M635_02370 +450055 EFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNK +450352

YSS_07240 +601 SILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +651
SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
M635_02370 +450355 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +450505

YSS_07240 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2326.00 bits: 1007.17 e-value: 0.000000
length: 653 gaps: 8 id: 526 positives: 563 coverage: 0.81 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNE+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
UC78_1278 +1249144 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1249441

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLE L + ++ CSSKPFFQFSRIYFLELMS YYERFHED+L LNKKLAE FKNI
UC78_1278 +1249444 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNI +1249741

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKH IKPDYV LER LT+
UC78_1278 +1249744 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1250041

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDK+++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH +T+LS KNIIFIGQDLAYA++G SH DY
UC78_1278 +1250044 EFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDY +1250341

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
UC78_1278 +1250344 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1250641

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEIL PL TQFELNLARIYVLNPKTKED F
UC78_1278 +1250644 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVF +1250941

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NK ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
UC78_1278 +1250944 NKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1251100

YSS_07240 vs: UC78_1267 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2444.00 bits: 1058.07 e-value: 0.000000
length: 650 gaps: 2 id: 543 positives: 571 coverage: 0.83 query coverage 0.84

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNE+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
UC78_1267 +1234947 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1235244

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLE L + ++ CSSKPFFQFSRIYFLELMS YYERFHED+L LNKKLAE FKNI
UC78_1267 +1235247 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNI +1235544

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKH IKPDYVCMLER +TA
UC78_1267 +1235547 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVCMLERKAITA +1235844

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
UC78_1267 +1235847 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1236144

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ Y H+ T AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
UC78_1267 +1236147 QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDAKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1236444

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEIL PL TQFELNLARIYVLNPKTKED FNK
UC78_1267 +1236447 FLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKN +1236744

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
UC78_1267 +1236747 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1236894

YSS_07240 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical protein

Score: 2100.00 bits: 909.68 e-value: 0.000000
length: 657 gaps: 12 id: 486 positives: 538 coverage: 0.74 query coverage 0.75

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNE+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
UC78_1276 +1245311 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1245608

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLE L + ++ CSSKPFFQFSRIYFLELMS YYERFHED+L LNKKLAENFKN
UC78_1276 +1245611 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENFKNS +1245908

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKH IKPDYV LER LT+
UC78_1276 +1245911 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1246208

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDK+++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH +T+LS KNIIFIGQDLAYA++G SH DY
UC78_1276 +1246211 EFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDY +1246508

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
UC78_1276 +1246511 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1246808

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SI+HCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTK
UC78_1276 +1246811 QNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1247108

YSS_07240 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +657
ED FNK ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
UC78_1276 +1247111 EDVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1247279

YSS_07240 vs: C8J_1253 in 81116; NCTC 11828 (Campylobacter jejuni subsp. jejuni 81116, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1670.00 bits: 724.20 e-value: 0.000000
length: 660 gaps: 23 id: 397 positives: 491 coverage: 0.61 query coverage 0.61

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL+NI LKESLKEIKSSKF+LILGKD LDINL++TS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
C8J_1253 +1261837 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1262134

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIW +FHILDFSNELQ L+++ + L D + F QFSRIYFLEL+S YYER+ E++L+LN + K
C8J_1253 +1262137 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIK +1262434

YSS_07240 +201 NIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEL +300
I++ GND +D L GI++F+YNL +++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADS+YPILAKH IKPDYVCMLER ++
C8J_1253 +1262437 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1262734

YSS_07240 +301 TAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP +400
++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
C8J_1253 +1262737 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1263034

YSS_07240 +401 DDYQNSANYES--QMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +500
D+ +E Q E + T+ AYGG G+VE+ W LF+ FE + + + I YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
C8J_1253 +1263037 KDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINI--YNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLN +1263334

YSS_07240 +501 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
+NKQNE +LKAY K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
C8J_1253 +1263337 INKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLN +1263634

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ R++
C8J_1253 +1263637 PKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1263814

YSS_07240 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factor

Score: 2254.00 bits: 976.12 e-value: 0.000000
length: 653 gaps: 13 id: 516 positives: 554 coverage: 0.80 query coverage 0.80

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLK+IKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLY YGFGNGIL
CJ.._06665 +1261511 MTFIPTQKELFNKNIEALGNILLKESLKKIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGIL +1261808

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
CJ.._06665 +1261811 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1262108

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYV LER LT+
CJ.._06665 +1262111 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1262408

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+FI V HP I+YL+ R ++ +F Y+ L F Y +G SVA L YL +KNII IGQDLAYA++G SH DY
CJ.._06665 +1262411 EFFNNDFGEFDKDIMFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDY +1262708

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + AYGGNGKVE+ IW +F+ FEN++ + ITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNK
CJ.._06665 +1262711 KNLDKHEGHFQRDKGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNK +1263008

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKV +SI+HCRDFSKILSNDF+KIQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF
CJ.._06665 +1263011 QNEFLLKAYYKVCKSIEHCRDFSKILSNDFKKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +1263308

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJ.._06665 +1263311 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1263467

YSS_07240 vs: RC25_06245 in CJ677CC519 (Campylobacter jejuni strain CJ677CC519, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1680.00 bits: 728.51 e-value: 0.000000
length: 660 gaps: 23 id: 402 positives: 490 coverage: 0.61 query coverage 0.62

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLK+T + LY + I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
RC25_06245 +1195347 MKFNLNQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKNTN--------DNTFLYGNVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1195644

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIWV+FHILDFSNELQ L+++ + L D + + F QFSRIYFLEL+S YYER+ E++L+LN + K
RC25_06245 +1195647 FKALLQNKNHQHIVVFEKDIEIIWVMFHILDFSNELQKNNLIIINTNILSEFDLSNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNNTILSTIK +1195944

YSS_07240 +201 NIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEL +300
I++ GND +D L GI++F+YNL +++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADS+YPILAKH IKPDYVCMLER ++
RC25_06245 +1195947 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPYSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1196244

YSS_07240 +301 TAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP +400
++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
RC25_06245 +1196247 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1196544

YSS_07240 +401 DDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +500
D+ +E Q E + T TAYGG KVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
RC25_06245 +1196547 KDFIHEKLHEGHFQKDENLFTSTAYGGKDKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +1196844

YSS_07240 +501 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
RC25_06245 +1196847 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLN +1197144

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KL+ERK+ K++ER++
RC25_06245 +1197147 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLEERKMQKYLERIK +1197324

YSS_07240 vs: CJM1cam_1292 in CJM1cam (Campylobacter jejuni strain CJM1cam, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor Maf-3/PseD

Score: 1670.00 bits: 724.20 e-value: 0.000000
length: 660 gaps: 23 id: 397 positives: 491 coverage: 0.61 query coverage 0.61

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL+NI LKESLKEIKSSKF+LILGKD LDINL++TS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
CJ..m_1292 +1256137 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1256434

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIW +FHILDFSNELQ L+++ + L D + F QFSRIYFLEL+S YYER+ E++L+LN + K
CJ..m_1292 +1256437 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIK +1256734

YSS_07240 +201 NIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEL +300
I++ GND +D L GI++F+YNL +++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADS+YPILAKH IKPDYVCMLER ++
CJ..m_1292 +1256737 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1257034

YSS_07240 +301 TAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP +400
++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
CJ..m_1292 +1257037 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1257334

YSS_07240 +401 DDYQNSANYES--QMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +500
D+ +E Q E + T+ AYGG G+VE+ W LF+ FE + + + I YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
CJ..m_1292 +1257337 KDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINI--YNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLN +1257634

YSS_07240 +501 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
+NKQNE +LKAY K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
CJ..m_1292 +1257637 INKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLN +1257934

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ R++
CJ..m_1292 +1257937 PKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1258114

YSS_07240 vs: CJH_06700 in F38011 (Campylobacter jejuni subsp. jejuni F38011, complete genome.)
Gene length: 1962bp / 654aa PV: Yes
Function: PseD protein

Score: 1649.00 bits: 715.14 e-value: 0.000000
length: 659 gaps: 21 id: 378 positives: 474 coverage: 0.58 query coverage 0.58

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F Q LFNKN+++LNN LKE LKE+ + +ELILGKDNLDINLKDT N LYQD IKEL ML TYN+KYLLYPVLYFYGFGNGIL
CJH_06700 +1267863 MKFNKNQTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLDINLKDTK--------NHTFLYQDSIKELDIMLKTYNEKYLLYPVLYFYGFGNGIL +1268160

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALL+NK H+H+V+FEK++EII ++FH+LDFS EL+ RL++L+ + L+ QDY +LCS+ PFF+FSR YFLEL S YYE+ +E++L LN L + FKN
CJH_06700 +1268163 FKALLKNKHHKHLVIFEKELEIIKIMFHLLDFSQELEENRLLILDVNSLEFQDYYDLCSTSPFFEFSRTYFLELSSDYYEKDQEEILNLNNNLMDRFKNT +1268460

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GNDP DALQGIEQ +YNLP ++TH Y+ LL +R+NLSDTAIIVSTGPSL KQL LK+YA KATI AD+SYPILAKHGIKPDYV LER T+
CJH_06700 +1268463 ILLKGNDPKDALQGIEQLIYNLPVLLTHAPYQNLLKQRENLSDTAIIVSTGPSLAKQLDTLKQYANKATIIAADASYPILAKHGIKPDYVLSLERILSTS +1268760

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
+FF+ +FG+FDKDI+FI + HP+ I+ LK RN +++ K F YY+ LK F G SVA LA +L HKNIIFIGQDLAYAE+G SHP ++
CJH_06700 +1268763 KFFDNNFGDFDKDILFITTHLTHPQTIKKLKNNNRNFLLSYKGSEFIYYLKLKQFGEFVEGHSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSHPSEH +1269060

YSS_07240 +401 QNSANYES----QMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +500
NY++ ++ H+ T AYGG V T W +F+ E + R TTYNCTEGGARIEG IEKPF CE LL +DL KPF K+E L +
CJH_06700 +1269063 I-YGNYDAVDKNKITYHLKTLAYGGKNMVYTKEAWNVFRGILEKHISQTKRLKLCTTYNCTEGGARIEGAIEKPFKELCETLLKEDLKKPFPKVEALNKD +1269360

YSS_07240 +501 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVY------LGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNP +600
KQ+E LLK+YYK+Y+SIKHC+DFS L + I + LNE ++ +N I++ID+ K KLE+ K M DLYEIL PL TQFELNLARIYVLNP
CJH_06700 +1269363 KQDELLLKSYYKIYKSIKHCKDFSDKLLKSYNHILESFSNLNLISNLNEGKKILNYLIQEIDKIKFKLEDGKNMLDLYEILGPLLTQFELNLARIYVLNP +1269660

YSS_07240 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +659
KT ED++NKS+LW+KEH+EF ++VY +IKAQE ALI+NI PLE +L +R L+K+ +++
CJH_06700 +1269663 KTPEDSYNKSLLWVKEHIEFFDMVYEYIKAQEKALIENITPLENELTQRNLEKYKRKIK +1269837

YSS_07240 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2340.00 bits: 1013.21 e-value: 0.000000
length: 653 gaps: 8 id: 529 positives: 566 coverage: 0.81 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
CJSA_1271 +1268710 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1269007

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
CJSA_1271 +1269010 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1269307

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH IKPDYV LER LT+
CJSA_1271 +1269310 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1269607

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+D++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
CJSA_1271 +1269610 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1269907

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
CJSA_1271 +1269910 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1270207

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAF
CJSA_1271 +1270210 QNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAF +1270507

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJSA_1271 +1270510 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1270666

YSS_07240 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2340.00 bits: 1013.21 e-value: 0.000000
length: 653 gaps: 8 id: 529 positives: 566 coverage: 0.81 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
CJSA_1256 +1250980 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1251277

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
CJSA_1256 +1251280 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1251577

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH IKPDYV LER LT+
CJSA_1256 +1251580 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1251877

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+D++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
CJSA_1256 +1251880 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1252177

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
CJSA_1256 +1252180 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1252477

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAF
CJSA_1256 +1252480 QNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAF +1252777

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJSA_1256 +1252780 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1252936

YSS_07240 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2230.00 bits: 965.76 e-value: 0.000000
length: 654 gaps: 14 id: 497 positives: 544 coverage: 0.76 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
CJSA_1269 +1264901 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1265198

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQN+RLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
CJSA_1269 +1265201 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1265498

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
CJSA_1269 +1265501 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1265798

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDF EFDKDI FI VVHP AI YL K N + +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPDDY
CJSA_1269 +1265801 EFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1266098

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ +E ILT AYGG G+V+TH +WL+FK E ++ + + YNCTEGGARI+G IEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
CJSA_1269 +1266101 QNSATYESKAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNE +1266398

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
CJSA_1269 +1266401 FLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1266698

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJSA_1269 +1266701 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1266860

YSS_07240 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function family

Score: 1754.00 bits: 760.43 e-value: 0.000000
length: 499 gaps: 7 id: 375 positives: 417 coverage: 0.78 query coverage 0.58

YSS_07240 +154 YTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPS +253
++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPS
IC..1_1265 +1288420 FSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPS +1288717

YSS_07240 +254 LTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLK +353
LTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L
IC..1_1265 +1288720 LTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLD +1289017

YSS_07240 +354 DFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKM +453
DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + +
IC..1_1265 +1289020 DFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +1289317

YSS_07240 +454 GITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIE +553
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIE
IC..1_1265 +1289320 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +1289617

YSS_07240 +554 KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERV +652
KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
IC..1_1265 +1289620 KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERV +1289914

YSS_07240 vs: ICDCCJ07001_1268 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 864bp / 288aa PV: No
Function: hypothetical protein

Score: 1256.00 bits: 545.61 e-value: 0.000000
length: 496 gaps: 15 id: 288 positives: 362 coverage: 1.00 query coverage 0.44

YSS_07240 +163 FFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLK +262
F QFSRIYFLEL+S YYER+ +++LELN + K I+R GNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLK
IC..1_1268 +1292278 FLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLK +1292575

YSS_07240 +263 KYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL +362
KYA KATIFCADS+YPILAKH IKPDYVCMLER ++ ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+
IC..1_1268 +1292578 KYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGI +1292875

YSS_07240 +363 -SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTE +462
SVAH +LA +LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTE
IC..1_1268 +1292878 VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTE +1293175

YSS_07240 +463 GGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDE +562
GGARIEGTIEKPFLWACENLL KDLNKPF KL L N + +LK Y K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID
IC..1_1268 +1293178 GGARIEGTIEKPFLWACENLLSKDLNKPFPKLN-LEYNSK-*IMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDI +1293475

YSS_07240 +563 FKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +658
K ++++ K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
IC..1_1268 +1293478 VKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +1293763

YSS_07240 vs: CJM1_1292 in M1 (Campylobacter jejuni subsp. jejuni M1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor

Score: 1670.00 bits: 724.20 e-value: 0.000000
length: 660 gaps: 23 id: 397 positives: 491 coverage: 0.61 query coverage 0.61

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL+NI LKESLKEIKSSKF+LILGKD LDINL++TS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
CJM1_1292 +1256127 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1256424

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIW +FHILDFSNELQ L+++ + L D + F QFSRIYFLEL+S YYER+ E++L+LN + K
CJM1_1292 +1256427 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIK +1256724

YSS_07240 +201 NIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEL +300
I++ GND +D L GI++F+YNL +++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADS+YPILAKH IKPDYVCMLER ++
CJM1_1292 +1256727 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1257024

YSS_07240 +301 TAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP +400
++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
CJM1_1292 +1257027 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1257324

YSS_07240 +401 DDYQNSANYES--QMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +500
D+ +E Q E + T+ AYGG G+VE+ W LF+ FE + + + I YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
CJM1_1292 +1257327 KDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINI--YNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLN +1257624

YSS_07240 +501 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
+NKQNE +LKAY K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
CJM1_1292 +1257627 INKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLN +1257924

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ R++
CJM1_1292 +1257927 PKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1258104

YSS_07240 vs: MTVDSCj20_1315 in MTVDSCj20 (Campylobacter jejuni subsp. jejuni strain MTVDSCj20, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1670.00 bits: 724.20 e-value: 0.000000
length: 660 gaps: 23 id: 397 positives: 491 coverage: 0.61 query coverage 0.61

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL+NI LKESLKEIKSSKF+LILGKD LDINL++TS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
MT..0_1315 +1291224 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1291521

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIW +FHILDFSNELQ L+++ + L D + F QFSRIYFLEL+S YYER+ E++L+LN + K
MT..0_1315 +1291524 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIK +1291821

YSS_07240 +201 NIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEL +300
I++ GND +D L GI++F+YNL +++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADS+YPILAKH IKPDYVCMLER ++
MT..0_1315 +1291824 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1292121

YSS_07240 +301 TAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHP +400
++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
MT..0_1315 +1292124 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1292421

YSS_07240 +401 DDYQNSANYES--QMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +500
D+ +E Q E + T+ AYGG G+VE+ W LF+ FE + + + I YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
MT..0_1315 +1292424 KDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINI--YNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLN +1292721

YSS_07240 +501 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
+NKQNE +LKAY K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
MT..0_1315 +1292724 INKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLN +1293021

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ R++
MT..0_1315 +1293024 PKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1293201

YSS_07240 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD protein

Score: 2205.00 bits: 954.98 e-value: 0.000000
length: 654 gaps: 14 id: 489 positives: 541 coverage: 0.75 query coverage 0.75

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
ER.._01444 +1370964 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1371261

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAE FK
ER.._01444 +1371264 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYS +1371561

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSY +LLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER+E TA
ER.._01444 +1371564 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTA +1371861

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+++ FI VVHP AI YL K N + +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPDDY
ER.._01444 +1371864 EFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1372161

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ +E ILT AYGG G+V+TH +WL+FK E ++ + + YNCTEGGARI+G IEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
ER.._01444 +1372164 QNSATYESKAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1372461

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
ER.._01444 +1372464 FLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1372761

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
ER.._01444 +1372764 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1372923

YSS_07240 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2332.00 bits: 1009.76 e-value: 0.000000
length: 653 gaps: 8 id: 528 positives: 564 coverage: 0.81 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+L
ER.._01446 +1374773 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVL +1375070

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
ER.._01446 +1375073 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1375370

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSSYPILAKH IKPDYV LER LT+
ER.._01446 +1375373 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1375670

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFD+D++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
ER.._01446 +1375673 EFFNNDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1375970

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
ER.._01446 +1375973 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1376270

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAF
ER.._01446 +1376273 QNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAF +1376570

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
ER.._01446 +1376573 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1376729

YSS_07240 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 2733.00 bits: 1182.74 e-value: 0.000000
length: 648 gaps: 0 id: 594 positives: 614 coverage: 0.92 query coverage 0.92

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+L
ER.._01430 +1357049 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVL +1357346

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
ER.._01430 +1357349 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1357646

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSY +LLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSSYPILAKH IKPDYVCMLER+E TA
ER.._01430 +1357649 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSEFTA +1357946

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFD+DIVFICAGVVHPKAIEYLKGRNLVITQKVL PYYINLKDFSYAAVG SVAH L+YLATYL HKNIIFIGQDLAYAENGNSHPDDYQN
ER.._01430 +1357949 EFFNHDFGEFDRDIVFICAGVVHPKAIEYLKGRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQN +1358246

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILT AYG +V+TH+IW+LFKN+FENE+IPNT KMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
ER.._01430 +1358249 SANYESQMYEHILTKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1358546

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAFNKSIL
ER.._01430 +1358549 LKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSIL +1358846

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
ER.._01430 +1358849 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1358990

YSS_07240 vs: A0W68_07165 in OD267 (Campylobacter jejuni strain OD267, complete genome.)
Gene length: 1229bp / 409aa PV: No
Function: hypothetical protein

Score: 476.00 bits: 209.15 e-value: 0.000000
length: 147 gaps: 8 id: 122 positives: 132 coverage: 0.83 query coverage 0.53

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
A0.._07165 +1337687 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1337984

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLEND +147
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+LEND
A0.._07165 +1337987 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILEND +1338125

Score: 333.00 bits: 147.46 e-value: 0.000000
length: 69 gaps: 0 id: 67 positives: 68 coverage: 0.83 query coverage 0.53

YSS_07240 +166 FSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +234
FSRIYFLELMSHYYERFHED+L LNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL
A0.._07165 +1338103 FSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1338307

Score: 666.00 bits: 291.11 e-value: 0.000000
length: 201 gaps: 4 id: 153 positives: 170 coverage: 0.83 query coverage 0.53

YSS_07240 +452 YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEK +551
YNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFLLKAYYKV +SI+HCRDFS ++KI+ ++ L +++ I I+
A0.._07165 +1338310 YNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQD +1338607

YSS_07240 +552 IDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +651
ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR
A0.._07165 +1338610 IDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1338907

YSS_07240 +652 R +652
R
A0.._07165 +1338910 R +1338910

YSS_07240 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factor

Score: 2310.00 bits: 1000.27 e-value: 0.000000
length: 653 gaps: 12 id: 520 positives: 562 coverage: 0.80 query coverage 0.80

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLK+I+SSKFELILGKDNLDINLKD S GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
H730_07620 +1368465 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKDNS----GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1368762

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+LE L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
H730_07620 +1368765 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILETSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1369062

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER LTA
H730_07620 +1369065 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERIPLTA +1369362

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+F+ V+P+ I+YL+ R ++T + +F INL + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
H730_07620 +1369365 EFFNNDFGEFDKDILFVIKSWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1369662

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + AYGGNGKVE+ IW +F+ +N + ++ + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
H730_07620 +1369665 KNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTI---SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1369962

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAF
H730_07620 +1369965 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAF +1370262

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKLDKWMERVRR
H730_07620 +1370265 NKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +1370421

YSS_07240 vs: H730_07630 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: motility accessory factor

Score: 2750.00 bits: 1190.07 e-value: 0.000000
length: 648 gaps: 4 id: 595 positives: 615 coverage: 0.92 query coverage 0.92

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLK+I+SSKFELILGKDNLDINLKD S GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
H730_07630 +1372274 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKDNS----GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1372571

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+LENDKLQ QDYTELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
H730_07630 +1372574 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1372871

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER E+ A
H730_07630 +1372874 IVSHGNDSADTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVA +1373171

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
H730_07630 +1373174 EFFNNDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1373471

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILT AYGG +V+TH+IW+LFK +FENE+IPNT KMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
H730_07630 +1373474 SANYESQMYEHILTKAYGGKEEVKTHAIWILFKKYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1373771

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAFNKSIL
H730_07630 +1373774 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSIL +1374071

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKLDKWMERVRR
H730_07630 +1374074 WIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +1374215

YSS_07240 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factor

Score: 2476.00 bits: 1071.88 e-value: 0.000000
length: 650 gaps: 14 id: 542 positives: 575 coverage: 0.85 query coverage 0.84

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJE1524 +1416258 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1416555

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
+KALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
CJE1524 +1416558 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1416855

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
CJE1524 +1416858 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1417155

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDIVF+C+GVVHPKAIEYLKGRN +I + L FP YI LK F + SVAH +L+ L HKNII IGQDLAYAENGNSHPDDY
CJE1524 +1417158 EFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSHPDDY +1417455

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
CJE1524 +1417458 QNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1417755

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKV +SIKHCRDFSKILSNDFEKIQS+YL LNEKEE +NLAIEKIDEFKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS
CJE1524 +1417758 FLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +1418055

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJE1524 +1418058 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1418205

YSS_07240 vs: CJE1522 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: motility accessory factor

Score: 2123.00 bits: 919.61 e-value: 0.000000
length: 658 gaps: 19 id: 481 positives: 531 coverage: 0.74 query coverage 0.74

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJE1522 +1412440 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1412737

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
+KALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
CJE1522 +1412740 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1413037

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
CJE1522 +1413040 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1413337

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDIVFI V HP I+YL+ R ++ +F Y+ L F Y +G SVAH L +L +KNII IGQDLAYA++G +H +
CJE1522 +1413340 EFFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGF +1413637

YSS_07240 +401 QNSANYESQMYEHIL----TTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +500
AN YE L TTAYGGNGKV++ IW LF+ FE +++ ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN
CJE1522 +1413640 IH-ANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1413937

YSS_07240 +501 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVYQSIKHCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKT
CJE1522 +1413940 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1414237

YSS_07240 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +658
KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJE1522 +1414240 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1414411

YSS_07240 vs: CjjRM1285_1333 in RM1285 (Campylobacter jejuni subsp. jejuni strain RM1285, complete genome.)
Gene length: 1968bp / 656aa PV: No
Function: motility accessory factor (function unknown)

Score: 1648.00 bits: 714.71 e-value: 0.000000
length: 657 gaps: 19 id: 384 positives: 475 coverage: 0.59 query coverage 0.59

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F Q +LFN+NI ALNN +LKESLK+IKSSKFELILGKDNLDINLK+TS + LY++ I EL +MLN YNDKYLLYPVLYFYGFGNGIL
Cj..5_1333 +1294836 MKFNQNQIKLFNRNINALNNTVLKESLKQIKSSKFELILGKDNLDINLKNTS--------DNTFLYKNAIDELNSMLNIYNDKYLLYPVLYFYGFGNGIL +1295133

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEK++EII ++ H++DFS EL+ +L++L+ + L+ QDY +LCSS PFFQFSR YFLEL S YYE+ + +L+LNK L E FKN
Cj..5_1333 +1295136 FKALLQNKNHQHIVVFEKELEIIKIMLHLMDFSQELKENKLIILDINSLEFQDYYDLCSSNPFFQFSRTYFLELSSDYYEKDKKYILKLNKDLIEKFKNS +1295433

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GND D LQGIEQ +YNLP+MITH +Y++ L KR+NLSDTAIIVSTGPSLTKQLP+LKKYA KATI ADSSYPILAKH IKPDYV LER LT+
Cj..5_1333 +1295436 ILLYGNDSKDNLQGIEQLIYNLPKMITHTAYQDFLKKRENLSDTAIIVSTGPSLTKQLPILKKYANKATIISADSSYPILAKHDIKPDYVVSLERILLTS +1295733

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN +FG+FDKDI+FI + HP+ I+ L+ RN ++ ++ F Y+ LK F G SVA LA +L HKNIIFIGQDLAY+ +G SH DY
Cj..5_1333 +1295736 EFFNNNFGDFDKDILFITTHLTHPQTIKNLEKNNRNFMLVHRSSEFTTYLKLKKFGELCEGHSVANVAYGLAVFLRHKNIIFIGQDLAYSNDGFSHTKDY +1296033

YSS_07240 +401 QNSANYESQM---YEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + + H T AYGG G VE+ W LF+ E + + TYNCTEGGARIEG IEKPF CE LL +LNK F K++PLS K
Cj..5_1333 +1296036 RNLNKHEGHYERDFGHFRTIAYGGVGFVESSFYWSLFRFFLEKRIHEANQLELCNTYNCTEGGARIEGAIEKPFKKTCEALLKNNLNKNFPKIDPLSSHK +1296333

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLN------EKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPK +600
QNE LLK YYK+ +SI HC++F K L + IQ + LN E +E +N I++ID+ K KLE+ K M DL EIL+ L QFELNLARI+VLNPK
Cj..5_1333 +1296336 QNELLLKCYYKIIKSINHCKNFKKELLKSYNHIQESFSNLNLISNLDEGKEILNYLIQEIDKIKFKLEDRKNMLDLCEILKTLLVQFELNLARIFVLNPK +1296633

YSS_07240 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERV +657
T ED++ KS+LW+KEH+EF +++Y HI+AQE ALIKNI+PLE +L +R L+K+ ++
Cj..5_1333 +1296636 TSEDSYKKSLLWVKEHIEFFKMIYTHIEAQEKALIKNIIPLENELTQRNLEKYKRKI +1296804

YSS_07240 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD protein

Score: 2523.00 bits: 1092.15 e-value: 0.000000
length: 650 gaps: 10 id: 560 positives: 588 coverage: 0.87 query coverage 0.86

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKD S GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
AX.._06575 +1262441 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDNS----GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1262738

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AX.._06575 +1262741 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1263038

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
AX.._06575 +1263041 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1263338

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFDKDI+F+CAGVVHPKAIEYLKGRN +IT + L FP YI LK F + SVAH +L+ L HKNIIFIGQDLAYAENGNSHPDDY
AX.._06575 +1263341 EFFNHDFGEFDKDILFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +1263638

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMY+HILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
AX.._06575 +1263641 QNSANYESQMYKHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1263938

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LN+KE D+NLAI KIDEFKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS
AX.._06575 +1263941 FLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +1264238

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AX.._06575 +1264241 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1264388

YSS_07240 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2396.00 bits: 1037.37 e-value: 0.000000
length: 651 gaps: 14 id: 526 positives: 564 coverage: 0.82 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNI+AL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
AX.._06490 +1245620 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1245917

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AX.._06490 +1245920 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1246217

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYV LER LT+
AX.._06490 +1246220 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1246517

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDI+F+CAGVVHPK IEYLK + +ITQK+LAFPYYINLK+F YAAVG SVAH AT+LSHKNIIFIGQDLAYAE+G SH DY N
AX.._06490 +1246520 EFFNNDFGEFDKDILFVCAGVVHPKTIEYLKNKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSN +1246817

YSS_07240 +401 SANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +500
+E + AYGG+GK E+ +W +F+ ++ + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN
AX.._06490 +1246820 LDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1247117

YSS_07240 +501 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +600
EFLLKAYYKVYQSIKHCRDFSKILSNDFE IQS+YL LN+KE D+NLAI KIDEFKNKLE+IKQMQDLYEIL L QFELNLARIYVLNPKTKEDAFNK
AX.._06490 +1247120 EFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNK +1247417

YSS_07240 +601 SILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +651
SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AX.._06490 +1247420 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1247570

YSS_07240 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2109.00 bits: 913.57 e-value: 0.000000
length: 657 gaps: 17 id: 478 positives: 527 coverage: 0.74 query coverage 0.74

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNI+AL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
AX.._06565 +1258623 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1258920

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AX.._06565 +1258923 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1259220

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYV LER LT+
AX.._06565 +1259223 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1259520

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+F+ VHP +YL+ RN ++ +F Y+ L DF Y +G SVA LA +L HKNI+ IGQDLAYAE+G SH DY
AX.._06565 +1259523 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSHTKDY +1259820

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + T AYG NGKVE+ +W LF+ FE ++ + ITTYNCTEGGARIEG IEKPFLWACENLLDKDLNKPFEKLEPLSLNK
AX.._06565 +1259823 SNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1260120

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINL---AIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKVYQSIKHCRDFS ++KI+ ++ L +E+ L I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTK
AX.._06565 +1260123 QNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTK +1260420

YSS_07240 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +657
EDAFNKSILWIKEHLEFMELVY HIKAQENALIKNILPLEEKLKERKLDKWMERVR+
AX.._06565 +1260423 EDAFNKSILWIKEHLEFMELVYEHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +1260591

YSS_07240 vs: CjjRM3196_1337 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 112.00 bits: 52.13 e-value: 0.000000
length: 54 gaps: 0 id: 44 positives: 47 coverage: 0.62 query coverage 0.63

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIK +54
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIK
Cj..6_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIK +1292067

Score: 1661.00 bits: 720.32 e-value: 0.000000
length: 594 gaps: 15 id: 366 positives: 449 coverage: 0.62 query coverage 0.63

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+++ + L D + L + F
Cj..6_1337 +1292107 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSNLYKKTNNIFL +1292404

YSS_07240 +167 QFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKY +266
QFSRIYFLEL+S YYER+ +++LELN + K I+R GNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKY
Cj..6_1337 +1292407 QFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKY +1292704

YSS_07240 +267 ASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-S +366
A KATIFCADS+YPILAKH IKPDYVCMLER ++ ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ S
Cj..6_1337 +1292707 ANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVS +1293004

YSS_07240 +367 VAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGG +466
VAH +LA +LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGG
Cj..6_1337 +1293007 VAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGG +1293304

YSS_07240 +467 ARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFK +566
ARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K
Cj..6_1337 +1293307 ARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVK +1293604

YSS_07240 +567 NKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
++++ K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
Cj..6_1337 +1293607 YQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +1293886

YSS_07240 vs: CjjRM3196_1335 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 2001bp / 667aa PV: Yes
Function: hypothetical protein

Score: 2265.00 bits: 980.86 e-value: 0.000000
length: 652 gaps: 7 id: 513 positives: 560 coverage: 0.77 query coverage 0.79

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
Cj..6_1335 +1288082 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1288379

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
Cj..6_1335 +1288382 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +1288679

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
Cj..6_1335 +1288682 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +1288979

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
Cj..6_1335 +1288982 EFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +1289279

YSS_07240 +401 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
Cj..6_1335 +1289282 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +1289579

YSS_07240 +501 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIEKIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
Cj..6_1335 +1289582 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +1289879

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
Cj..6_1335 +1289882 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERV +1290035

YSS_07240 vs: CjjRM3197_1337 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 112.00 bits: 52.13 e-value: 0.000000
length: 54 gaps: 0 id: 44 positives: 47 coverage: 0.62 query coverage 0.63

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIK +54
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIK
Cj..7_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIK +1292067

Score: 1661.00 bits: 720.32 e-value: 0.000000
length: 594 gaps: 15 id: 366 positives: 449 coverage: 0.62 query coverage 0.63

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+++ + L D + L + F
Cj..7_1337 +1292107 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSNLYKKTNNIFL +1292404

YSS_07240 +167 QFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKY +266
QFSRIYFLEL+S YYER+ +++LELN + K I+R GNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKY
Cj..7_1337 +1292407 QFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKY +1292704

YSS_07240 +267 ASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-S +366
A KATIFCADS+YPILAKH IKPDYVCMLER ++ ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ S
Cj..7_1337 +1292707 ANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVS +1293004

YSS_07240 +367 VAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGG +466
VAH +LA +LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGG
Cj..7_1337 +1293007 VAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGG +1293304

YSS_07240 +467 ARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFK +566
ARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K
Cj..7_1337 +1293307 ARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVK +1293604

YSS_07240 +567 NKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +660
++++ K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
Cj..7_1337 +1293607 YQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +1293886

YSS_07240 vs: CjjRM3197_1335 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 2002bp / 667aa PV: Yes
Function: No annotation data

Score: 147.00 bits: 67.23 e-value: 0.000000
length: 54 gaps: 0 id: 52 positives: 52 coverage: 0.75 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIK +54
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIK
Cj..7_1335 +1288081 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIK +1288240

Score: 2130.00 bits: 922.62 e-value: 0.000000
length: 586 gaps: 7 id: 450 positives: 497 coverage: 0.75 query coverage 0.77

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQF
Cj..7_1335 +1288280 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQF +1288577

YSS_07240 +167 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +266
SRIYFLEL+SHYYERFHED+L LNKKLAENFK I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYAS
Cj..7_1335 +1288580 SRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +1288877

YSS_07240 +267 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAH +366
KATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH
Cj..7_1335 +1288880 KATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAH +1289177

YSS_07240 +367 TLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGAR +466
YL+ +L HKNIIFIGQDLAYA+NGNSHPD++ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGAR
Cj..7_1335 +1289180 MAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGAR +1289477

YSS_07240 +467 IEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIK +566
IEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIEKIDEFKNKLE+++
Cj..7_1335 +1289480 IEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDME +1289777

YSS_07240 +567 QMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERV +652
QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
Cj..7_1335 +1289780 QMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERV +1290035

YSS_07240 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation data

Score: 1123.00 bits: 488.24 e-value: 0.000000
length: 321 gaps: 8 id: 255 positives: 274 coverage: 0.87 query coverage 0.85

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJS3_1430 +1321539 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1321836

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
+KALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQN+RLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
CJS3_1430 +1321839 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1322136

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVC+ + +L
CJS3_1430 +1322139 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCI*KEQKLLL +1322436

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGV +321
F G + + G+
CJS3_1430 +1322439 SFLIMILGNLIRILCLFAQGL +1322499

Score: 1381.00 bits: 599.53 e-value: 0.000000
length: 362 gaps: 7 id: 298 positives: 318 coverage: 0.87 query coverage 0.85

YSS_07240 +290 VCM-LERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLA +389
+C+ LERTE+TAEFFN DFGEFDKDIVF+C+GVVHPKAIEYLKGRN +I + L FP YI LK F + SVAH +L+ L HKNII IGQDLA
CJS3_1430 +1322378 LCLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLA +1322675

YSS_07240 +390 YAENGNSHPDDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFE +489
YAENGNSHPDDYQNSANYESQMYEHILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFE
CJS3_1430 +1322678 YAENGNSHPDDYQNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFE +1322975

YSS_07240 +490 KLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVL +589
KLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILSNDFEKIQS+YL LNEKEE +NLAIEKIDEFKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVL
CJS3_1430 +1322978 KLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1323275

YSS_07240 +590 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +651
NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJS3_1430 +1323278 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1323461

YSS_07240 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation data

Score: 1091.00 bits: 474.44 e-value: 0.000000
length: 292 gaps: 8 id: 244 positives: 260 coverage: 0.74 query coverage 0.74

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJS3_1427 +1317722 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1318019

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
+KALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
CJS3_1427 +1318022 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1318319

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCM +292
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVC+
CJS3_1427 +1318322 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCI +1318595

Score: 1011.00 bits: 439.93 e-value: 0.000000
length: 370 gaps: 12 id: 234 positives: 271 coverage: 0.74 query coverage 0.74

YSS_07240 +290 VCM-LERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLA +389
+C+ LER E+ AE FN DFGEFDKDIVFI V HP I+YL+ R ++ +F Y+ L F Y +G SVAH L +L +KNII IGQDLA
CJS3_1427 +1318561 LCLYLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLA +1318858

YSS_07240 +390 YAENGNSHPDDYQNSANYESQMYEHIL----TTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLN +489
YA++G +H + AN YE L TTAYGGNGKV++ IW LF+ FE +++ ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLN
CJS3_1427 +1318861 YAKDGQTHSQGFIH-ANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLN +1319158

YSS_07240 +490 KPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFEL +589
KPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFEL
CJS3_1427 +1319161 KPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFEL +1319458

YSS_07240 +590 NLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +659
NLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
CJS3_1427 +1319461 NLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1319668

YSS_07240 vs: A0W69_07845 in WP2202 (Campylobacter jejuni strain WP2202, complete genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 2699.00 bits: 1168.07 e-value: 0.000000
length: 648 gaps: 18 id: 569 positives: 592 coverage: 0.96 query coverage 0.88

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFN + LN +K I + I+G + NL LYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
A0.._07845 +1463497 MTFTPTQKELFNNQVN-LNLS*VKII*ISI*KIQV*KIMG-GGYNENL----------------LYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1463794

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHI+VFEKDIEIIWV+FH+LDFSNELQN+RLM+L+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKNI
A0.._07845 +1463797 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1464094

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
A0.._07845 +1464097 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1464394

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDI+FICAGVVHPKAIEYLK RNLVITQKVLAFPYYINLKDFSYAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
A0.._07845 +1464397 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1464694

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNEFL
A0.._07845 +1464697 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1464994

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKV +SI+HCRDFSKILSNDFE IQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
A0.._07845 +1464997 LKAYYKVCKSIEHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1465294

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
A0.._07845 +1465297 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1465438

YSS_07240 vs: QZ67_01453 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1512bp / 504aa PV: Yes
Function: hypothetical protein

Score: 2103.00 bits: 910.98 e-value: 0.000000
length: 661 gaps: 21 id: 501 positives: 545 coverage: 0.99 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
QZ67_01453 +1322595 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1322892

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
QZ67_01453 +1322895 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1323192

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH IKPDYV LER LT+
QZ67_01453 +1323195 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1323492

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+D++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
QZ67_01453 +1323495 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1323792

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
QZ67_01453 +1323795 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1324092

YSS_07240 +501 QNEFLL-KAYYKVYQSI-KHCRDF---SK--ILSNDFEKIQSVYLGLNEKEEDINL-AIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +600
QNEFLL AYYKVYQS +F SK IL KI VY+ + K++ I + ++K K KLE+IKQMQDLY+ILQ L QFELNLARIYVLN
QZ67_01453 +1324095 QNEFLL*MAYYKVYQSY*AIVENF**NSK*MIL-----KIYKVYI*V*MKKKRISI*LLKK*MSLKTKLEDIKQMQDLYDILQSLFIQFELNLARIYVLN +1324392

YSS_07240 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +661
PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
QZ67_01453 +1324395 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1324575

YSS_07240 vs: QZ67_01469 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 2235.00 bits: 967.92 e-value: 0.000000
length: 654 gaps: 14 id: 497 positives: 543 coverage: 0.77 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+L
QZ67_01469 +1336523 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGVL +1336820

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
QZ67_01469 +1336823 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1337120

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKHGIKPDYVCMLERTE+TA
QZ67_01469 +1337123 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHGIKPDYVCMLERTEITA +1337420

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDF EFDKDI FI VVHP AI YL K N + +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPDDY
QZ67_01469 +1337423 EFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1337720

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ +E ILT AYGG G+V+TH +WL+FK E ++ + + YNCTEGGARI+G IEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
QZ67_01469 +1337723 QNSATYESKAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNE +1338020

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDF ++KI+ ++ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
QZ67_01469 +1338023 FLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1338320

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
QZ67_01469 +1338323 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1338482

YSS_07240 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2340.00 bits: 1013.21 e-value: 0.000000
length: 653 gaps: 8 id: 529 positives: 566 coverage: 0.81 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
QZ67_01471 +1340332 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1340629

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLM+LENDKLQTQDY ELCS KPFFQFSRIYFLELMSHYYERFHEDVLELNKKL + FK+
QZ67_01471 +1340632 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1340929

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH IKPDYV LER LT+
QZ67_01471 +1340932 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1341229

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+D++F+C V+P+ I+YL+ RN ++ + F IN + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
QZ67_01471 +1341232 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1341529

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
N +E + AYGGNGKVE+ IW +F+ +N + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
QZ67_01471 +1341532 SNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1341829

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVYQSIKHCRDF KILSNDFE IQS+YL LNEKEEDINLAIEKIDEFKNKLE+IKQMQDLY+ILQ L QFELNLARIYVLNPKTKEDAF
QZ67_01471 +1341832 QNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAF +1342129

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
QZ67_01471 +1342132 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1342288

YSS_07240 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 2796.00 bits: 1209.91 e-value: 0.000000
length: 648 gaps: 0 id: 606 positives: 622 coverage: 0.93 query coverage 0.93

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKE FNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNGIL
N149_1281 +1278070 MTFIPTQKEFFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGIL +1278367

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQN+RLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
N149_1281 +1278370 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLSTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1278667

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDP DALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
N149_1281 +1278670 IVSHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1278967

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDIVF+CAGVVHPK IEYLK + +ITQKVLAFPYYINLK+F YAAVG SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
N149_1281 +1278970 EFFNHDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +1279267

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILT AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
N149_1281 +1279270 SANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1279567

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKV QSI+HCRDFSKILSNDFEKIQSVYL LNEKEE +NLAIEKIDEFKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
N149_1281 +1279570 LKAYYKVCQSIEHCRDFSKILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1279867

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N149_1281 +1279870 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1280011

YSS_07240 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factor

Score: 2388.00 bits: 1033.92 e-value: 0.000000
length: 651 gaps: 14 id: 525 positives: 561 coverage: 0.82 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FTPTQKELFNKNIEAL NILLKE LKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
N149_1298 +1294864 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1295161

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
N149_1298 +1295164 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1295461

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYV LER LT+
N149_1298 +1295464 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1295761

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDIVF+CAGVVHPK IEYLK + +ITQK+LAFPYYINLK+F YAAVG SVAH AT+LSHKNIIFIGQDLAYAE+G SH DY N
N149_1298 +1295764 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSN +1296061

YSS_07240 +401 SANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +500
+E + AYGG+GK E+ +W +F+ ++ + +R + TTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQN
N149_1298 +1296064 LDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQN +1296361

YSS_07240 +501 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +600
EFLLKAYYKV +SIKHCRDFSKILSNDFEKIQSVYL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEIL L QFELNLARIYVLNPKTKEDAFNK
N149_1298 +1296364 EFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNK +1296661

YSS_07240 +601 SILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +651
SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N149_1298 +1296664 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1296814

YSS_07240 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factor

Score: 2235.00 bits: 967.92 e-value: 0.000000
length: 654 gaps: 14 id: 498 positives: 542 coverage: 0.77 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDK+LLYPVLYFYGFGNGIL
N149_1296 +1291055 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGIL +1291352

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
N149_1296 +1291355 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1291652

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
N149_1296 +1291655 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1291952

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
N149_1296 +1291955 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1292252

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMY+HILT AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
N149_1296 +1292255 QNSANYESQMYKHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1292552

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SIKHCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
N149_1296 +1292555 FLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1292852

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
N149_1296 +1292855 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1293014

YSS_07240 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2412.00 bits: 1044.27 e-value: 0.000000
length: 651 gaps: 14 id: 529 positives: 567 coverage: 0.83 query coverage 0.82

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIE+L NILLKESLKEI+SSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AB.._08255 +1558359 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1558656

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AB.._08255 +1558659 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1558956

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITH SYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYV LER LT+
AB.._08255 +1558959 IVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1559256

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDIVF+CAGVVHPK IEYLK + +ITQKVLAFPYYINLK+F YAAVG SVAH AT+LSHKNIIFIGQDLAYA++G SH DY+N
AB.._08255 +1559259 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSHTKDYKN +1559556

YSS_07240 +401 SANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +500
+E + AYGG+GK E+ +W +F+ ++ + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN
AB.._08255 +1559559 LDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1559856

YSS_07240 +501 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +600
EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYL LNEKEEDINLAI+KIDEFKNKLENIKQMQDLYEIL PL QFELNLA+IYVLNPKTKEDAFNK
AB.._08255 +1559859 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNK +1560156

YSS_07240 +601 SILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +651
SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AB.._08255 +1560159 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1560309

YSS_07240 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2229.00 bits: 965.33 e-value: 0.000000
length: 654 gaps: 14 id: 495 positives: 541 coverage: 0.77 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIE+L NILLKESLKEI+SSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AB.._08325 +1571356 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1571653

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AB.._08325 +1571656 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1571953

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITH SYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
AB.._08325 +1571956 IVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1572253

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
AB.._08325 +1572256 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1572553

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
AB.._08325 +1572556 QNSANYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1572853

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SIKHCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
AB.._08325 +1572856 FLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1573153

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR+
AB.._08325 +1573156 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +1573315

YSS_07240 vs: AB430_08340 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 2684.00 bits: 1161.60 e-value: 0.000000
length: 582 gaps: 0 id: 547 positives: 560 coverage: 0.92 query coverage 0.84

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLENDKLQ QDYTELCSSKPFFQF
AB.._08340 +1575364 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQF +1575661

YSS_07240 +167 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +266
SRIYFLELMSHYYERFHED+L LNKKLAENFKN I+ GNDPLDALQGIEQFVYNLPQMITHPSY +LLSKRKNLSDTAIIVSTGPSL KQLPLLKKYA
AB.._08340 +1575664 SRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLIKQLPLLKKYAN +1575961

YSS_07240 +267 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTL +366
KATIFCADSSYPILAKHGIKPDYVCMLERTE+TAEFFNHDFGEFDKDIVF+CAGVVHPK IEYLK + +ITQKVLAFPYYINLK+F YAAVG SVAHTL
AB.._08340 +1575964 KATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHTL +1576261

YSS_07240 +367 SYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +466
SYLAT+LSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILT AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE
AB.._08340 +1576264 SYLATHLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +1576561

YSS_07240 +467 KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLY +566
KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFE IQSVYL LNEKEEDINLAI+KIDEFKNKLENIKQMQDLY
AB.._08340 +1576564 KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLY +1576861

YSS_07240 +567 EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
EIL PL QFELNLA+IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AB.._08340 +1576864 EILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1577107

YSS_07240 vs: VC76_06695 in FB1 (Campylobacter coli strain FB1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1733.00 bits: 751.37 e-value: 0.000000
length: 654 gaps: 19 id: 392 positives: 485 coverage: 0.60 query coverage 0.60

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FT Q+E+F +NI AL N +L++ L++IK +KFEL+LG DNLDINL++T + LLY + I EL +ML YNDKYLLYPVLYFYGFGNGIL
VC76_06695 +1299942 MNFTSNQQEIFKQNINALVNEILRKKLQKIKNTKFELLLGNDNLDINLRNTK--------DNTLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGIL +1300239

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNK HQHIV+FE DIEI+W++FH+LDFS E++ ++++ + +++ +DY L +KPF F RIYFLEL S YYE+ +D+ ++NK L E FK
VC76_06695 +1300242 FKALLQNKHHQHIVIFENDIEILWIMFHLLDFSCEIKKNKIIIFDTNEINIKDYEMLTLTKPFISFLRIYFLELSSSYYEKMNKDIQKVNKNLMEYFKKA +1300539

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
++ GNDPLDALQGIEQFV+NLP+M+TH SYKEL+ KRKNLS TAIIVSTGPSL KQLPLLKKY KATIFCADS+YPILAKH IKPDYVCMLER LTA
VC76_06695 +1300542 MIGYGNDPLDALQGIEQFVHNLPKMLTHSSYKELIKKRKNLSKTAIIVSTGPSLIKQLPLLKKYQNKATIFCADSAYPILAKHNIKPDYVCMLERASLTA +1300839

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDF +FDKDIVFICA ++HP AI YL+ R ++ + L+F +I D+ Y SVAH +A L HKNIIFIGQDLAYAENG+SHP +Y
VC76_06695 +1300842 EFFNHDFKDFDKDIVFICASLIHPNAITYLEKNNREYILISRFLSFALFIACHDYGYFDQSPSVAHMSYIIAAKLCHKNIIFIGQDLAYAENGDSHPQEY +1301139

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNS+ +ES +Y+ I YGG V+THSIWLLFK E ++ I TYNCTEGGA IEGTIE+ F C+ LL DLNKPF KL+ + KQNE
VC76_06695 +1301142 QNSSTFESNIYQKIECLGYGGKNSVKTHSIWLLFKQIIEQLILDYPY---INTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIKLKKPNIQKQNE +1301439

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSV-----YLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +600
+LK+Y K+Y+SIKHC +F K E I+S YL L E +E +++ I+ ID FK KLEN+ M D YEIL PL QFELNLARIYVLNPKT ED
VC76_06695 +1301442 LMLKSYAKIYKSIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKEILDILIQIIDNFKTKLENV-NMVDFYEILGPLLMQFELNLARIYVLNPKTLED +1301739

YSS_07240 +601 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVR +654
+FNKS+LWIKEHLEF+ +VYGHI+AQENAL KNI+PLEE+LK+R K+++R++
VC76_06695 +1301742 SFNKSVLWIKEHLEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIK +1301901

YSS_07240 vs: AR446_01555 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1908bp / 636aa PV: No
Function: PseE protein

Score: 1149.00 bits: 499.45 e-value: 0.000000
length: 631 gaps: 32 id: 304 positives: 387 coverage: 0.98 query coverage 0.96

YSS_07240 +11 FNKNIEALN----NillkeslkeiksskfelILGKDNLDINL-KDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +110
FNKN++AL N L K+ + +F GKDNLDIN+ K + +K QDPIKEL+ L + D + YPVL+FYGFGNGIL+K LL
AR.._01555 +309557 FNKNLKALSGFEYNNLRKKLKDLKELREFTFTQGKDNLDINIIKKSNLKKMY---------QDPIKELEKDLEYFKD-FTRYPVLFFYGFGNGILYKILL +309854

YSS_07240 +111 QNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNG +210
QN+ + I++FEK++E+I + +DFS +L RL++L D + ++ F R Y L + +YE + ED+L+LNK + KN L G
AR.._01555 +309257 QNQVLKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDL-FYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMHG +309554

YSS_07240 +211 NDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNH +310
NDP DALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLER E+ AE FN
AR.._01555 +308957 NDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNN +309254

YSS_07240 +311 DFGEFDKDIVFICAGVVHPKAIEYLKG--RNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSAN +410
DFGEFDKDI+F+ A +VH K I YL+ R ++ K F Y+ L ++ Y G+SV+H LA L HKNII IGQDLAYA++G +H + AN
AR.._01555 +308657 DFGEFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARYLELDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIH-AN +308954

YSS_07240 +411 YESQMYEHIL----TTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF +510
YE L TTAYGGNGKV++ IW LF+ FEN + K TYNCT+GGARIE IEKPF CE+LL +K F+KL+ L +Q +
AR.._01555 +308357 LHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSK----TYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKL +308654

YSS_07240 +511 LLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKE-EDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +610
LK Y K+ + + +F K ++I+ + G N+ E IN + ID+ K KL N K + L EIL P + + L +Y+ + K D NK
AR.._01555 +308057 GLKIYQKIKKNMNLSLNFKKECKKVQKQIHNLTHGKNKLSLEQIN---QNIDKIKEKLSNKKYLF-LQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKL +308354

YSS_07240 +611 ILWIKEHLEFMELVYGHIKAQENALIKNILP +641
WI H ME + ++AQ+ L ILP
AR.._01555 +307757 FAWIYAHESLMENIIELLEAQDKRLKIAILP +307847

Score: 1167.00 bits: 507.22 e-value: 0.000000
length: 672 gaps: 88 id: 321 positives: 398 coverage: 0.98 query coverage 0.96

YSS_07240 +40 GKDNLDINL-KDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQN +139
GKDNLDIN+ K + +K QDPIKEL+ L + D + YPVL+FYGFGNGIL+K LLQN+ + I++FEK++E+I + +DFS +L
AR.._01555 +309458 GKDNLDINIIKKSNLKKMY---------QDPIKELEKDLEYFKD-FTRYPVLFFYGFGNGILYKILLQNQVLKRIIIFEKELELIFLALNFIDFSKDLSL +309755

YSS_07240 +140 ARLMVLENDKLQTQDYTELCSSKPFFQ-----FSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKE +239
RL++L D + L F+ F R Y L + +YE + ED+L+LNK + KN L GNDP DALQGIEQFVYNLPQMITHPSYKE
AR.._01555 +309158 GRLIILHHDDIN------LPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMHGNDPKDALQGIEQFVYNLPQMITHPSYKE +309455

YSS_07240 +240 LLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKG- +339
LLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLER E+ AE FN DFGEFDKDI+F+ A +VH K I YL+
AR.._01555 +308858 LLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDFGEFDKDIIFLVASLVHKKTISYLEKN +309155

YSS_07240 +340 -RNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHIL----TTAYGGNGKVETHS +439
R ++ K F Y+ L ++ Y G+SV+H LA L HKNII IGQDLAYA++G +H + AN YE L TTAYGGNGKV++
AR.._01555 +308558 QRKYILIIKGQPFARYLELDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIH-ANLHNGDYERDLDRFSTTAYGGNGKVQSSE +308855

YSS_07240 +440 IWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEK +539
IW LF+ FEN + K TYNCT+GGARIE IEKPF CE+LL +K F+KL+ L +Q + LK Y K+ + + +F K ++
AR.._01555 +308258 IWTLFRQIFENFIAFSKSK----TYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKKECKKVQKQ +308555

YSS_07240 +540 IQSVYLGLNEKE-EDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEH-------LEFMELVYGHIK-- +639
I+ + G N+ E IN + ID+ K KL N K + L EIL P + + L +Y+ + K D NK WI H +E +E +K
AR.._01555 +307958 IHNLTHGKNKLSLEQIN---QNIDKIKEKLSNKKYL-FLQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKLFAWIYAHESLMENIIELLEAQDKRLKIA +308255

YSS_07240 +640 -----------------------------------------AQENALIKNILPleeklkerklDKWMERVRR +711
AQENALIKNILPLEEKLKERKLDKWMERVR+
AR.._01555 +307658 ILPLQDFLEKKKAL*KLRCIKASKKLLKKF*NILLNRISLCAQENALIKNILPLEEKLKERKLDKWMERVRK +307871

YSS_07240 vs: AR446_01560 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1832bp / 610aa PV: No
Function: No annotation data

Score: 1802.00 bits: 781.14 e-value: 0.000000
length: 621 gaps: 65 id: 412 positives: 455 coverage: 0.67 query coverage 0.63

YSS_07240 +38 ILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQ +137
+LGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ
AR.._01560 +311272 VLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +311569

YSS_07240 +138 NARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +237
D+L LNKKLAENFKN I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSK
AR.._01560 +310972 S----------------------------------------------DILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +311269

YSS_07240 +238 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNL +337
RK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYVCMLER E+ AE FN DFGEFDKDIVFI V HP I+YL+ R
AR.._01560 +310672 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAF +310969

YSS_07240 +338 VITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHIL----TTAYGGNGKVETHSIWLL +437
++ +F Y+ L F Y +G SVAH L +L +KNII IGQDLAYA++G +H + AN YE L TTAYGGNGKV++ IW L
AR.._01560 +310372 ILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIH-ANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTL +310669

YSS_07240 +438 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSV +537
F+ FE +++ ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDF ++KI+
AR.._01560 +310072 FRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNS +310369

YSS_07240 +538 YLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNI +637
+ L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNI
AR.._01560 +309772 FTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNI +310069

YSS_07240 +638 LPleeklkerklDKWMERVRR +658
LPLEEKLKERKLDKWMERVRR
AR.._01560 +309472 LPLEEKLKERKLDKWMERVRR +309532

YSS_07240 vs: AR446_01545 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1228bp / 409aa PV: No
Function: No annotation data

Score: 956.00 bits: 416.20 e-value: 0.000000
length: 316 gaps: 54 id: 233 positives: 243 coverage: 0.92 query coverage 0.58

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FTPTQKELFNKNIEAL NILLKESLKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
AR.._01545 +305646 MIFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +305943

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ D+L LNKKLAENFKN
AR.._01545 +305346 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQS----------------------------------------------DILGLNKKLAENFKNS +305643

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYVCMLER E+ A
AR.._01545 +305046 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDEIVA +305343

YSS_07240 +301 EFFNHDFGEFDKDIVF +316
E FN DFGEFDKDIVF
AR.._01545 +304746 ECFNNDFGEFDKDIVF +304791

Score: 357.00 bits: 157.81 e-value: 0.000000
length: 72 gaps: 0 id: 70 positives: 70 coverage: 0.92 query coverage 0.58

YSS_07240 +449 ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKI +520
ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDF I
AR.._01545 +304854 ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNSI +305067

Score: 312.00 bits: 138.40 e-value: 0.000000
length: 75 gaps: 0 id: 75 positives: 75 coverage: 0.92 query coverage 0.58

YSS_07240 +574 TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AR.._01545 +304646 TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +304868

YSS_07240 vs: ATE51_00894 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1945bp / 648aa PV: Yes
Function: hypothetical protein

Score: 152.00 bits: 69.38 e-value: 0.000000
length: 54 gaps: 0 id: 53 positives: 53 coverage: 0.92 query coverage 0.92

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIK +54
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIK
AT.._00894 +455222 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIK +455381

Score: 2664.00 bits: 1152.97 e-value: 0.000000
length: 582 gaps: 0 id: 543 positives: 558 coverage: 0.92 query coverage 0.92

YSS_07240 +67 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQF +166
QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVLENDKLQ QDYTELCSSKPFFQF
AT.._00894 +455023 QDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQF +455320

YSS_07240 +167 SRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +266
SRIYFLELMSHYYERFHED+L LNKKLAE FKN I+ GNDPLDALQGIEQFVYNLPQMITHPSY +LLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS
AT.._00894 +454723 SRIYFLELMSHYYERFHEDILGLNKKLAETFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYAS +455020

YSS_07240 +267 KATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTL +366
KATIFCADSSYPILAKHGIKPDYVCMLERTE+TAEFFNHDFGEFDKDIVF+CAGVVHPK IEYLK + +ITQKVLAFPYYINLK+F YAAVG SVAHTL
AT.._00894 +454423 KATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHTL +454720

YSS_07240 +367 SYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +466
SYLAT+LSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILT AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE
AT.._00894 +454123 SYLATHLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIE +454420

YSS_07240 +467 KPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLY +566
KPFLWACENLL KDLNKPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLY
AT.._00894 +453823 KPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLY +454120

YSS_07240 +567 EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AT.._00894 +453523 EILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +453766

YSS_07240 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 2236.00 bits: 968.35 e-value: 0.000000
length: 654 gaps: 14 id: 498 positives: 544 coverage: 0.77 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AT.._00898 +459031 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +459328

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQN+RLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AT.._00898 +458731 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +459028

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
AT.._00898 +458431 IVFHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +458728

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
AT.._00898 +458131 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +458428

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG K++TH +WL+FK E ++ + + YNCTEGGARI+GTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
AT.._00898 +457831 QNSANYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +458128

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
AT.._00898 +457531 FLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +457828

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AT.._00898 +457231 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +457390

YSS_07240 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical protein

Score: 2396.00 bits: 1037.37 e-value: 0.000000
length: 651 gaps: 14 id: 525 positives: 564 coverage: 0.82 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FTPTQKELFNKNIE+L NILLKESLK+I+SSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AT.._00928 +472027 MIFTPTQKELFNKNIESLSNILLKESLKQIQSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +472324

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
AT.._00928 +471727 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +472024

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDYV LER LT+
AT.._00928 +471427 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +471724

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDIVF+CAGVVHPK IEYLK + +ITQKVLAFPYYINLK+F YAAVG SVAH AT+LSHKNIIFIGQDLAYAE+G SH DY N
AT.._00928 +471127 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSN +471424

YSS_07240 +401 SANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +500
+E + AYGG+GK E+ +W +F+ ++ + +R + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN
AT.._00928 +470827 LDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI---SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +471124

YSS_07240 +501 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +600
EFLLKAYYKV +SIKHCRDFSKILSNDFEKIQSVYL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEIL PL QFELNLA+IYVLNPKTKEDAFNK
AT.._00928 +470527 EFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNK +470824

YSS_07240 +601 SILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +651
SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
AT.._00928 +470227 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +470377

YSS_07240 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2211.00 bits: 957.57 e-value: 0.000000
length: 654 gaps: 14 id: 492 positives: 541 coverage: 0.76 query coverage 0.76

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
YSQ_02185 +448770 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +449067

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQN+RLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAE FK
YSQ_02185 +448470 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYS +448767

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
IL GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER+E TA
YSQ_02185 +448170 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTA +448467

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD+++ FI VVHP AI YL K N + +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPDDY
YSQ_02185 +447870 EFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +448167

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSA YES+ +E ILT AYGG G+V+TH +WL+FK E ++ + + YNCTEGGARI+G IEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
YSQ_02185 +447570 QNSATYESKAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +447867

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLA+IYVLNPKTKEDA
YSQ_02185 +447270 FLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYVLNPKTKEDA +447567

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR+
YSQ_02185 +446970 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +447129

YSS_07240 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD protein

Score: 2641.00 bits: 1143.05 e-value: 0.000000
length: 648 gaps: 4 id: 582 positives: 603 coverage: 0.90 query coverage 0.90

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSQ_02175 +444961 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +445258

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
YSQ_02175 +444661 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +444958

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
YSQ_02175 +444361 IVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +444658

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAV SVAH +L+ L HKNIIFIGQDLAYAENGNSHPDDYQN
YSQ_02175 +444061 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQN +444358

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMY+HILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
YSQ_02175 +443761 SANYESQMYKHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +444058

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKV +SIKHCRDFSKILSN+FEKIQSVYL LNEKEE +NLAIEKIDEFKNKLE+IKQMQDLYEIL PL QFELNLARIYVLNPKTKEDAFNKSIL
YSQ_02175 +443461 LKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAFNKSIL +443758

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
YSQ_02175 +443161 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +443302

YSS_07240 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2326.00 bits: 1007.17 e-value: 0.000000
length: 653 gaps: 8 id: 528 positives: 568 coverage: 0.81 query coverage 0.81

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSQ_02255 +462692 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +462989

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
YSQ_02255 +462392 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +462689

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GND D LQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV LER LT+
YSQ_02255 +462092 IVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +462389

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFD+D++F+C V+P+ I+YL+ R ++T + +F INL + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
YSQ_02255 +461792 EFFNNDFGEFDQDVLFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +462089

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + AYGGNGKVE+ IW +F+ +N + ++ + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
YSQ_02255 +461492 KNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTI---SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +461789

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKV +SIKHCRDFSKILSN+FEKIQSVYL LNEKEE +NLAIEKIDEFKNKLE+IKQMQDLYEIL PL QFELNLARIYVLNPKTKEDAF
YSQ_02255 +461192 QNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAF +461489

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
YSQ_02255 +460892 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +461048

YSS_07240 vs: YSS_07230 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2240.00 bits: 970.08 e-value: 0.000000
length: 654 gaps: 14 id: 498 positives: 543 coverage: 0.76 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
YSS_07230 +1351597 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1351894

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQN+RLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
YSS_07230 +1351897 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1352194

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
YSS_07230 +1352197 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1352494

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
YSS_07230 +1352497 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1352794

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG K++TH +WL+FK E ++ + + YNCTEGGARI+GTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
YSS_07230 +1352797 QNSANYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +1353094

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKV +SI+HCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
YSS_07230 +1353097 FLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +1353394

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
YSS_07230 +1353397 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1353556

YSS_07240 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical protein

Score: 1125.00 bits: 489.10 e-value: 0.000000
length: 631 gaps: 32 id: 299 positives: 383 coverage: 0.58 query coverage 0.46

YSS_07240 +11 FNKNIEALN----NillkeslkeiksskfelILGKDNLDINL-KDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +110
FNKN++AL N L K+ + +F GKDNLDIN+ K +K QDPIKEL+ L + D + YPVL+FYGFGNGIL+K LL
YSS_07245 +1357367 FNKNLKALSGFEYNDLRKKLEDLKELREFTFTQGKDNLDINIIKKRNLKKMY---------QDPIKELEKNLEYFKD-FTRYPVLFFYGFGNGILYKILL +1357664

YSS_07240 +111 QNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNG +210
QN+ + I++FEK++E+I + +DFS +L RL++L D + ++ F R Y L + +YE + ED+L+LNK + KN L G
YSS_07245 +1357667 QNQALKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDL-FYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRG +1357964

YSS_07240 +211 NDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNH +310
NDP DA+QGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLER E+ AE FN
YSS_07245 +1357967 NDPKDAMQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNN +1358264

YSS_07240 +311 DFGEFDKDIVFICAGVVHPKAIEYLKG--RNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSAN +410
DF +FDKDI+F+ A +VH K I YL+ R ++ K F + L ++ Y G+SV+H LA L HKNII IGQDLAYA++G +H + AN
YSS_07245 +1358267 DFKDFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARCLGLDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIH-AN +1358564

YSS_07240 +411 YESQMYEHIL----TTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF +510
YE L TTAYGGNGKV++ IW LF+ FEN + K TYNCT+GGARIE IEKPF CE+LL +K F+KL+ L +Q +
YSS_07245 +1358567 LHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKSK----TYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKL +1358864

YSS_07240 +511 LLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKE-EDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +610
LK Y K+ + + +F K ++I+ + G N+ E IN + ID+ K KL N K + L EIL P + + L +Y+ + K D NK
YSS_07245 +1358867 GLKIYQKIKKNMNLSLNFKKECKKVQKQIHNLTHGKNKLSLEQIN---QNIDKIKEKLSNKKYLF-LQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKL +1359164

YSS_07240 +611 ILWIKEHLEFMELVYGHIKAQENALIKNILP +641
WI H ME + ++AQ+ L ILP
YSS_07245 +1359167 FAWIYAHESLMENIIELLEAQDKRLKIAILP +1359257

YSS_07240 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2411.00 bits: 1043.84 e-value: 0.000000
length: 653 gaps: 8 id: 544 positives: 577 coverage: 0.84 query coverage 0.84

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSS_07160 +1339246 MIFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1339543

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQNARLMVLENDKLQ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
YSS_07160 +1339546 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNARLMVLENDKLQAQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1339843

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV LER LT+
YSS_07160 +1339846 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1340143

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFN DFGEFDKDI+F+C V+P+ I+YL+ R ++T + +F INL + Y G SVAH AT+L +KNIIFIGQDLAYA++G SH DY
YSS_07160 +1340146 EFFNNDFGEFDKDILFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1340443

YSS_07240 +401 QNSANYESQMYE---HILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +500
+N +E + AYGGNGKVE+ IW +F+ +N + ++ + TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK
YSS_07160 +1340446 KNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI---SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1340743

YSS_07240 +501 QNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKV +SIKHCRDF KILSNDFEKIQS+YL LNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF
YSS_07160 +1340746 QNEFLLKAYYKVCKSIKHCRDFNKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAF +1341043

YSS_07240 +601 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
YSS_07160 +1341046 NKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1341202

YSS_07240 vs: YSU_02220 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1958bp / 652aa PV: No
Function: No annotation data

Score: 1101.00 bits: 478.75 e-value: 0.000000
length: 291 gaps: 8 id: 248 positives: 260 coverage: 0.74 query coverage 0.74

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKE LKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
YSU_02220 +454840 MTFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +455137

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
YSU_02220 +454540 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +454837

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVC +291
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKH IKPDY C
YSU_02220 +454240 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYAC +454510

Score: 1019.00 bits: 443.38 e-value: 0.000000
length: 369 gaps: 11 id: 234 positives: 270 coverage: 0.74 query coverage 0.74

YSS_07240 +290 VCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAY +389
+CMLER E+ AE FN DFGEFDKDIVFI V HP I+YL+ R ++ +F Y+ L F Y +G SVAH L +L +KNII IGQDLAY
YSU_02220 +454001 LCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAY +454298

YSS_07240 +390 AENGNSHPDDYQNSANYESQMYEHIL----TTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNK +489
A++G +H + AN YE L TTAYGGNGKV++ IW LF+ FE +++ ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNK
YSU_02220 +453701 AKDGQTHSQGFIH-ANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNK +453998

YSS_07240 +490 PFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELN +589
PFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELN
YSU_02220 +453401 PFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELN +453698

YSS_07240 +590 LARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +658
LARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR+
YSU_02220 +453101 LARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +453305

YSS_07240 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2873.00 bits: 1243.13 e-value: 0.000000
length: 648 gaps: 0 id: 621 positives: 633 coverage: 0.96 query coverage 0.96

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSU_02270 +464985 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +465282

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAE FKNI
YSU_02270 +464685 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNI +464982

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSL KQLPLLKKYA KATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
YSU_02270 +464385 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +464682

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +400
EFFN DFGEFDKDI+FICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN
YSU_02270 +464085 EFFNNDFGEFDKDIIFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +464382

YSS_07240 +401 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +500
SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL
YSU_02270 +463785 SANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +464082

YSS_07240 +501 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +600
LKAYYKVYQSIKHCRDFSKILSNDFEKIQS+YL LNEKEEDINLAIEKID+FKNKLE+IKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL
YSU_02270 +463485 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +463782

YSS_07240 +601 WIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
WIKEHL+FMELVYGHIKAQE ALIKNILPLEEKLKERKLDKWMERVRR
YSU_02270 +463185 WIKEHLKFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +463326

YSS_07240 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD protein

Score: 2482.00 bits: 1074.47 e-value: 0.000000
length: 650 gaps: 14 id: 544 positives: 574 coverage: 0.85 query coverage 0.84

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M FTPTQKELFNKNIEAL NILLKE LKEIKSSKFEL+LGKDNLDINLKDTS + LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
YSU_02210 +451026 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +451323

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ ARLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHED+L LNKKLAENFKN
YSU_02210 +450726 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +451023

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
YSU_02210 +450426 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +450723

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFDKDIVF+CAGVVHPKAIEYLKGRN +I + L FP YI LK F + SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
YSU_02210 +450126 EFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +450423

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG +++TH +W+ FK E +I K ITTYNCTEGGARIEGTIEKPFLWACENLL KDLNKPFEKLEPLSLNKQNE
YSU_02210 +449826 QNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNE +450123

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +600
FLLKAYYKV +SIKHCRDFSKILSNDF IQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS
YSU_02210 +449526 FLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +449823

YSS_07240 +601 ILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +650
ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
YSU_02210 +449226 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +449373

YSS_07240 vs: A6K30_02235 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1766bp / 588aa PV: Yes
Function: PseD protein

Score: 1194.00 bits: 518.87 e-value: 0.000000
length: 279 gaps: 0 id: 256 positives: 264 coverage: 0.83 query coverage 0.75

YSS_07240 +38 ILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQ +137
ILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ
A6.._02235 +453001 ILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQ +453298

YSS_07240 +138 NARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +237
ARLMVL +KL+ QDY ELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSK
A6.._02235 +452701 SARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +452998

YSS_07240 +238 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVF +316
RK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV LER LT+EFFN DFGEFDKDI+F
A6.._02235 +452401 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILF +452635

Score: 970.00 bits: 422.24 e-value: 0.000000
length: 346 gaps: 25 id: 230 positives: 259 coverage: 0.83 query coverage 0.75

YSS_07240 +322 VHPKAIEYLKGRN----LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLA-----TYLSHKNIIFI--------GQDLAYAENGNSHPDDYQNSANY +421
V+P+ I+YL+ L T + +F I + F++ A+ + A +A +L +KN F+ D Y ++ +HPDDYQ +
A6.._02235 +452144 VYPQTIKYLQKNKIEHILYYTSRPSSFIETISI--FAHMAM*VKWAKCCYNMAYEFDIRHLNYKNYSFL*DRI*LMQKMDFPYTKDYKTHPDDYQHEGHF +452441

YSS_07240 +422 ESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGI--TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +521
+ EHI AYGGNGKVE+ I ++ + + NT I TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK
A6.._02235 +451844 QRDKGEHIQCLAYGGNGKVESSGIL----DYVLDLSLQNTISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +452141

YSS_07240 +522 AYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +621
AYYKV +SIKHCRDF KILSNDFEKIQ +YL LN+KE D+NLAI KIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI
A6.._02235 +451544 AYYKVCKSIKHCRDFNKILSNDFEKIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +451841

YSS_07240 +622 KEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +667
KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
A6.._02235 +451244 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +451379

YSS_07240 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2258.00 bits: 977.84 e-value: 0.000000
length: 654 gaps: 14 id: 502 positives: 544 coverage: 0.78 query coverage 0.77

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTS + LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
A6.._02165 +440734 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +441031

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQN+RLMVL+ L + ++ CSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN
A6.._02165 +440434 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +440731

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
I+ GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE+TA
A6.._02165 +440134 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +440431

YSS_07240 +301 EFFNHDFGEFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +400
EFFNHDFGEFD I FI +VHP AI YL K N I +F Y+ L F Y +G SVAH YL+ +L HKNIIFIGQDLAYAENGNSHPDDY
A6.._02165 +439834 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +440131

YSS_07240 +401 QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +500
QNSANYESQMYEHILT AYGG K++TH +WL+FK E ++ + + YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE
A6.._02165 +439534 QNSANYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNE +439831

YSS_07240 +501 FLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEED---INLAIEKIDEFKNKLENIKQMQ-DLYEILQPLRTQFELNLARIYVLNPKTKEDA +600
FLLKAYYKVYQSIKHCRDF ++KI+ + L +++ I I+ ID+ K +++ + Q DL +IL PL TQFELNLARIYVLNPKTKEDA
A6.._02165 +439234 FLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDA +439531

YSS_07240 +601 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKW ERVRR
A6.._02165 +438934 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWTERVRR +439093

YSS_07240 vs: A6K30_02155 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1977bp / 659aa PV: Yes
Function: PseD protein

Score: 1252.00 bits: 543.89 e-value: 0.000000
length: 303 gaps: 0 id: 291 positives: 295 coverage: 0.94 query coverage 0.95

YSS_07240 +1 MTFTPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
A6.._02155 +436925 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +437222

YSS_07240 +101 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +200
FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI
A6.._02155 +436625 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +436922

YSS_07240 +201 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +300
ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYV + + + +
A6.._02155 +436325 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLYVGKN*INS +436622

YSS_07240 +301 EFF +303
F
A6.._02155 +436025 RVF +436031

Score: 478.00 bits: 210.01 e-value: 0.000000
length: 177 gaps: 29 id: 118 positives: 125 coverage: 0.94 query coverage 0.95

YSS_07240 +291 CMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQK---VLAFPYYI-----------NLKDFSYAAVGLSVAHTLSYLATYLSHK +390
CMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKG K +L+ Y I LK +Y LSYLATYLSHK
A6.._02155 +436054 CMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKG*KFSHNSKSSMLLSILYTILKI*FLCML*HGLKCCTY---------DLSYLATYLSHK +436351

YSS_07240 +391 NIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHIL-TTAYGGNGKVETHSIWLLF--KNWFENEMIPNTRKMG +467
NIIFIGQDLAYAENGNSHPDDYQNSANYE Q+ I TAYGGNGKVE+ S ++ F NWFENEMIPNTRKMG
A6.._02155 +435754 NIIFIGQDLAYAENGNSHPDDYQNSANYERHFQIDMNIF*RTAYGGNGKVES-S*YMAFI*TNWFENEMIPNTRKMG +435982

Score: 633.00 bits: 276.87 e-value: 0.000000
length: 154 gaps: 1 id: 136 positives: 140 coverage: 0.94 query coverage 0.95

YSS_07240 +422 KVETHSIWLLFK-NWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKI +521
K++ HSIWLLFK + + K ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKI
A6.._02155 +435636 KLKAHSIWLLFKLIGLKMK*FQILEKWDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKI +435933

YSS_07240 +522 LSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRT +575
LSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRT
A6.._02155 +435336 LSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRT +435495

Score: 306.00 bits: 135.81 e-value: 0.000000
length: 74 gaps: 0 id: 74 positives: 74 coverage: 0.94 query coverage 0.95

YSS_07240 +575 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +648
QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR
A6.._02155 +435173 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +435392

YSS_07240 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factor

Score: 1713.00 bits: 742.75 e-value: 0.000000
length: 644 gaps: 16 id: 381 positives: 463 coverage: 0.60 query coverage 0.59

YSS_07240 +10 LFNKNIEALNNillkeslkeiksskfelIL-GKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNK +109
+F KNI+AL N LK+ L +I+ I+ GKDNLDINL +T + L+Y++ ++EL MLN Y +KY LYPVLYFYGFGNGIL+KALLQN+
CINS_1188 +1147940 MFAKNIQALLNPHLKQKLLQIQKQNKFQIIQGKDNLDINLLNTQ--------DNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALLQNQ +1148237

YSS_07240 +110 NHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDP +209
NH+HI+VFE D+E+I+ +F+ILDFS EL+ ARL++++ + L+ +DY LCS P F FSR YFLEL S YYE++++DVL +N L FKN I GN P
CINS_1188 +1147640 NHKHIIVFENDLELIYAMFQILDFSKELEEARLVIIDTNDLKRRDYDYLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSIFSHGNSP +1147937

YSS_07240 +210 LDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFG +309
+D LQGIEQFVYN+P MI+ PSYKELL KRKNLSDTAIIVSTGPSL KQLPLLK+Y+SKATIFCADS+YPILAK+ IKPDYVCMLER ++TAEFFN DFG
CINS_1188 +1147340 IDVLQGIEQFVYNIPSMISNPSYKELLNKRKNLSDTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAEFFNNDFG +1147637

YSS_07240 +310 EFDKDIVFICAGVVHPKAIEYL--KGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES +409
EFDKDIVF+ VVHP A +YL K +V+ + F +I+L++ YA G SVA LAT L HKNIIFIGQDLAYAENG+SHP DYQNSA +ES
CINS_1188 +1147040 EFDKDIVFVLKSVVHPNAFKYLEKKQTKIVVISENSHFINFIDLQNLGYAYSGPSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDYQNSATFES +1147337

YSS_07240 +410 QMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYK +509
YEHI T AYGG V+TH IWLLFKN E + +R TYNCTEGGARIEG IEKPF CE LL K+L KPF KL+ L +NKQNE LLKAY K
CINS_1188 +1146740 DTYEHIDTLAYGGGYMVKTHFIWLLFKNEMEKLI---SRNENCATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQNELLLKAYCK +1147037

YSS_07240 +510 VYQSIKHCRDFSKILSNDFEKIQSVY--LGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKE +609
+ QSIK C D K + + + + L E +N I +D+ K K+EN K M DLYEIL P QFELNLARIYVLNPKTKED+FNKS+LWIKE
CINS_1188 +1146440 INQSIKKCVDLKKDFQKELDSLNKMMNDFLLSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTKEDSFNKSVLWIKE +1146737

YSS_07240 +610 HLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
HLE ++L+ HI AQ+ LIKNI LE L R +K +E++ +
CINS_1188 +1146140 HLEWIQLIIAHINAQKLGLIKNIKQLECVLINRGFEKLVEKICK +1146269

YSS_07240 vs: CONCH_0163 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 1911bp / 637aa PV: Yes
Function: motility accessory factor

Score: 1439.00 bits: 624.55 e-value: 0.000000
length: 630 gaps: 30 id: 345 positives: 418 coverage: 0.54 query coverage 0.53

YSS_07240 +7 QKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +106
QK +FNKN++ALNNI LKE+LK+IK F+ I GKD LDIN LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQ
CONCH_0163 +145107 QKHIFNKNLKALNNIKLKETLKKIKILNFKTIQGKDPLDINFIHNG--------GGYTLYNNTLNELDEKLKLYNDKYLLYPVLYFYGFGNGILYKALLQ +145404

YSS_07240 +107 NKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGN +206
NKN Q IVVFEK++E I++ FH +DFS EL+N L+VL+ + LQ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K IIL NGN
CONCH_0163 +144807 NKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGN +145104

YSS_07240 +207 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHD +306
DALQGIE FVYNLP +I+ S+ ELL KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN D
CONCH_0163 +144507 SSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNND +144804

YSS_07240 +307 FGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NY +406
FGEF+KDIVFI + VVH K I +L V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y
CONCH_0163 +144207 FGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTY +144504

YSS_07240 +407 ESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKA +506
Q ++ LTT AY GN V+T WLLFK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK+
CONCH_0163 +143907 NPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAKLEKLNENKQKELMLKS +144204

YSS_07240 +507 YYKVYQSIKHCRDFSKILSNDFEKIQSVYLG-----LNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKS +606
+YK++Q IK C K + +YL L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK
CONCH_0163 +143607 FYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKN +143904

YSS_07240 +607 ILWIKEHLEFMELVYGHIKAQENALIKNIL +636
LWIKEHLE +EL+ GHIK + +L KNI+
CONCH_0163 +143307 YLWIKEHLEWLELIIGHIKKLQESLEKNII +143394

YSS_07240 vs: CSUB8521_0178 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1363.00 bits: 591.77 e-value: 0.000000
length: 646 gaps: 20 id: 324 positives: 423 coverage: 0.50 query coverage 0.50

YSS_07240 +8 KELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +107
K +F KN +AL N LKE L K F+++ G D LDIN LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQN
CS..1_0178 +160059 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNG--------GGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQN +160356

YSS_07240 +108 KNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGND +207
KN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + Y ELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K IL GN
CS..1_0178 +159759 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +160056

YSS_07240 +208 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDF +307
DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
CS..1_0178 +159459 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDF +159756

YSS_07240 +308 GEFDKDIVFICAGVVHPKAIEYLKG--RNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +407
G+FDKDI+F+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
CS..1_0178 +159159 GKFDKDIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +159456

YSS_07240 +408 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +507
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
CS..1_0178 +158859 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +159156

YSS_07240 +508 AYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +607
++YK ++IK C + L + I L E + IE++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
CS..1_0178 +158559 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +158856

YSS_07240 +608 KEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CS..1_0178 +158259 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +158394

YSS_07240 vs: CSUB8521_0235 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1926bp / 642aa PV: Yes
Function: putative motility accessory factor

Score: 1447.00 bits: 628.00 e-value: 0.000000
length: 651 gaps: 23 id: 344 positives: 431 coverage: 0.54 query coverage 0.53

YSS_07240 +4 TPTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKA +103
P QK LF KN +AL N LKE L K F+++ G D LDIN LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KA
CS..1_0235 +207310 APMQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNG--------GGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKA +207607

YSS_07240 +104 LLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILR +203
LLQNKN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + Y ELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K IL
CS..1_0235 +207010 LLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILS +207307

YSS_07240 +204 NGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFF +303
GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFF
CS..1_0235 +206710 KGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEFF +207007

YSS_07240 +304 NHDFGEFDKDIVFICAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQN +403
N DFG+FDKDIVF+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
CS..1_0235 +206410 NNDFGDFDKDIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHY +206707

YSS_07240 +404 SA--NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +503
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
CS..1_0235 +206110 GKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEELLTKKLKKPFVKLEKLNQNKQK +206407

YSS_07240 +504 EFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +603
E +LKA+YKV++ IK C IL + I L E + IE++D FK K+E I ++ E++ PL TQFELNLARIYVLNPKTKEDAFNK
CS..1_0235 +205810 ELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSKIEKILILK---ELIDPLNTQFELNLARIYVLNPKTKEDAFNK +206107

YSS_07240 +604 SILWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +654
++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CS..1_0235 +205510 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +205660

YSS_07240 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1369.00 bits: 594.36 e-value: 0.000000
length: 646 gaps: 20 id: 326 positives: 424 coverage: 0.51 query coverage 0.50

YSS_07240 +8 KELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +107
K +F KNI+AL N LKE L K F+++ G D LDIN LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQN
CS..3_0172 +155447 KNIFEKNIQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNG--------GGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQN +155744

YSS_07240 +108 KNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGND +207
KN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + Y ELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K IL GN
CS..3_0172 +155147 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +155444

YSS_07240 +208 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDF +307
DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
CS..3_0172 +154847 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDF +155144

YSS_07240 +308 GEFDKDIVFICAGVVHPKAIEYLKG--RNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +407
G+FDKDIVF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
CS..3_0172 +154547 GDFDKDIVFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +154844

YSS_07240 +408 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +507
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
CS..3_0172 +154247 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +154544

YSS_07240 +508 AYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +607
++YK ++IK C + L + I L E + IE++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
CS..3_0172 +153947 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILR---SVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +154244

YSS_07240 +608 KEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CS..3_0172 +153647 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +153782

YSS_07240 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factor

Score: 1451.00 bits: 629.73 e-value: 0.000000
length: 649 gaps: 20 id: 335 positives: 432 coverage: 0.52 query coverage 0.52

YSS_07240 +5 PTQKELFNKNIEALNNillkeslkeiksskfelILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKAL +104
P QK LF KNI+AL N+ LKE L+ K F++I+G D LDIN LY+D + +L LN YNDKYLLYPVLYFYGFGNGIL+KAL
CVOL_0220 +187971 PMQKALFEKNIQALQNVKLKEKLQNFKKNNFKVIVGNDALDINFIHNG--------GGYRLYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYKAL +188268

YSS_07240 +105 LQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRN +204
LQNKN Q IVVFEK++E I++ FH +DFS EL+N L+VL+ + + Y E+CS PFF F R+YFL++ YYE+++ED+L N + K I R
CVOL_0220 +187671 LQNKNRQKIVVFEKELEFIYLSFHYIDFSEELKNGALIVLDTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLHIKRSIYRY +187968

YSS_07240 +205 GNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFN +304
GND D+L GIE F+YNLP++I+ S+K+L KRK LSD AIIVSTGPSL KQLPLLK+Y A+IFCADS+YPILAK GIKPDYV LER + T+EFFN
CVOL_0220 +187371 GNDSQDSLMGIENFIYNLPKIISNYSFKQLCLKRKKLSDMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERVKETSEFFN +187668

YSS_07240 +305 HDFGEFDKDIVFICAGVVHPKAIEYLKG--RNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY---Q +404
DF E DKD++F+ + HP +YL R ++ F ++I L DF Y +G SVA +LA +L HKNIIFIGQDLAYA++G SHP +Y Q
CVOL_0220 +187071 NDFKELDKDVLFVLKSLTHPNTFQYLNANNRKIIPATYYTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGSSHPKEYYYGQ +187368

YSS_07240 +405 NSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF +504
+ H+ T AYGG KV T IW+LFK E + + TTYNCTEGGARI+GTIEKPF CE LL K LNKPF KLE L NKQ E
CVOL_0220 +186771 YDTYDPKDISYHLTTIAYGGQDKVFTNEIWMLFKTQIEEAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKLEKLNQNKQKEL +187068

YSS_07240 +505 LLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +604
+LKA+YKVY++IK C K + + + L E++ IE++D FK K+E I ++ E++ PL TQFELNLARIYVLNPKTKEDAFNK++
CVOL_0220 +186471 MLKAFYKVYKAIKICNTLEK----ECLHLYNTLIFLSNDEKNFKNVIEQLDYFKSKIEKILILK---ELINPLNTQFELNLARIYVLNPKTKEDAFNKTL +186768

YSS_07240 +605 LWIKEHLEFMELVYGHIKAQENALIKNILPleeklkerklDKWMERVRR +653
LWIKEHLE + ++ HIKA + L KNI+ LE++L+ + L ++++++++
CVOL_0220 +186171 LWIKEHLEWILMLKDHIKALKITLEKNIINLEKELENQNLHQYVQKIKK +186315

YSS_07240 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factor

Score: 1466.00 bits: 636.20 e-value: 0.000000
length: 605 gaps: 27 id: 324 positives: 414 coverage: 0.51 query coverage 0.50

YSS_07240 +38 ILGKDNLDINLKDTSIKnngggynenllyQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQ +137
I G DNLDINL +T + L+Y++P++EL ML YN+KY LYPVLYFYGFGNGIL+KALLQNK H+ I+VFEKD+EII +F I+DFS ELQ
CVOL_1306 +1273458 IQGNDNLDINLLNTQ--------DNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIVFEKDLEIIHTMFSIIDFSKELQ +1273755

YSS_07240 +138 NARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +237
RL++ + + L DY +C +P F+R YFLEL S YYER+H+D+L++N +AE K +L+ GN PLDALQGIEQF +NLP+MI+ P+YKELL K
CVOL_1306 +1273758 EFRLVIADTNCLNILDYEIMCRQQPMLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGIEQFTHNLPKMISCPTYKELLRK +1274055

YSS_07240 +238 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN--- +337
RKN DTAIIVSTGPSL+KQL LLK+YA KATIFCADS+YPILAK+ IKPDYV LER LT+EFFN DFG+FDKDI+FI ++ I+YL+ N
CVOL_1306 +1274058 RKNSNDTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDIIFILKSYIYKNTIKYLEKNNRKY +1274355

YSS_07240 +338 LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQ--NSANYESQMYEH----ILTTAYGGNGKVETHSI +437
++I+ F ++ L ++ Y A G SVA + LA L HKNII IGQDLAY+ +G SH ++Y A + ++Y+ AYGG GKV++ +
CVOL_1306 +1274358 MLISSTDAKFIFFTQLHNYGYLATGCSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTYLTDAYKDNKIYKRDYGKYECIAYGGEGKVQSSFV +1274655

YSS_07240 +438 WLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKI----LSND +537
W LF+ FE + I + T YNCTEGGARI G IEKPF CE LL K K F LE LSLNKQNE +LKAY K+ +SI HC++ +K LSN
CVOL_1306 +1274658 WTLFRQTFESD-IALFKHYDTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLKAYTKIKKSIVHCQELTKTFQEYLSNL +1274955

YSS_07240 +538 FEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALI +637
E Q + ++D+N I IDE K ++E+ K + +LYE+L PL QFELNLARIYVLNP ++D +NKS+LWIKEH+ +EL+ HIKAQE AL
CVOL_1306 +1274958 NENCQNIC-----SQKDLNYIINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNKSLLWIKEHISWLELIIAHIKAQEKALN +1275255

YSS_07240 +638 KNILP +642
NI+P
CVOL_1306 +1275258 DNIIP +1275270