Gene group 45

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
45PJ17_069353-oxoacyl-ACP synthase101011
PJ17_06935
N149_1272
G157_02260
VC76_06585
AR.._01605
YSQ_02305
YSS_07110
YSU_02320
A6.._02280
Cla_1314
CD56_06750

Annotated functions

Function#Occuringscore
3-oxoacyl-ACP synthase82.43
3-oxoacyl-(acyl carrier protein) synthase III FabH2, putative11.27
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII10.38

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
PJ17_06935
N149_1272
G157_02260
AR.._01605
YSQ_02305
YSS_07110
YSU_02320
A6.._02280
1
Cla_1314
CD56_06750

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
PJ17_06935
N149_1272
G157_02260
AR.._01605
YSQ_02305
YSS_07110
YSU_02320
A6.._02280
1
Cla_1314
CD56_06750

00-1597

00-1597 : PJ17_06935 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLKCFKEANDFIDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKGG
+300 GIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

15-537360

15-537360 : N149_1272 [tract entry] [top]

Function: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLKCFKEANDFIDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKKK
+300 GGGGIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

CVM N29710

CVM N29710 : G157_02260 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLKCFKEANDFIDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKGG
+300 GIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

HC2-48

HC2-48 : AR446_01605 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLKCFKEANDFIDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKGG
+300 GIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

RM1875

RM1875 : YSQ_02305 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLKCFKEANDFIDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKKK
+300 GGGIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

RM4661

RM4661 : YSS_07110 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFTPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLTCFKEANDFSDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKKK
+300 GGGIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

RM5611

RM5611 : YSU_02320 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYASDLASKALEKLFRENLLLKDELDVLLVYSFSPDFLAPALSS
+100 LIHKNLGLSEKTLCFDNIAFCPGFLQGLMQAFSLLDNENIKKIAFICVSVKSKKIPKKDKITYLSNSDSASVILLEKSNTKEKAFFSQKIFSKLATEETF
+200 PLKCFKEANDFIDMDKNLTFSHLNENFPRFFDDFFDNFKLDKSKIGEFFFGSANNFIKTKLLELLNFKEIKNDETLKNYGDVTINKLAFDLANYEWRKGG
+300 GIKQVFMASFGTGITFNAMSLKIDFSKIKNFIEIIDFNT

[show detailed alignment]

YH501

YH501 : A6K30_02280 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNLKLNSHNIKAISIVLPKNPHTLEKELQECNLNQKKYELLKQNTGINHHFISPNNIYQVI

No BLAST hits


RM2100; ATCC BAA-1060D

RM2100; ATCC BAA-1060D : Cla_1314 [tract entry] [top]

Function: 3-oxoacyl-(acyl carrier protein) synthase III FabH2, putative
+0 MNLKTTNHSIKAISIVLPKNPLHKEDELKLCNINERKYQLLQENSGIFNHFVSDDSTYASDLATQALEELFSKDILKKDEIDLLVFTSFTPDYLAPACTS
+100 LIHKNLNLSSHTLCLDVLGFCSGFLQSLLQVFLALNQQNIKKAILICASVKSKAIDTQKDKITFLNNSDSASAILIEKNTNTEDKSYFSQKIFSTQCIEE
+200 TLPYGGLRLDSLNILKVDNNLTFSFIMQNYPTFFQEFFEHFNLEKTSFDEFFIHSSDNFSKQKLYERLNLNFIQDNILKNYGNTTINKLPLELASYTGRG
+300 GGDKQIFLGSFGTGITFNACSLKINFDKLQSFIKVV

[show detailed alignment]

Slaughter Beach

Slaughter Beach : CD56_06750 [tract entry] [top]

Function: 3-oxoacyl-ACP synthase
+0 MNIETINHFIKAVSIVLPKNPLHKEDELKLCNINERKYQLLQENSGIFNHFVSDNSTYASDLATQALEELFSKDILKKDEIDLLVFTSFTPDYLAPACTS
+100 LIHKNLNLSSHTLCLDVLGFCPGFLQSLLQVFLALNLPSIKKAVLICASVKSKAIDAQKDKITFLNNSDSASAILIEKNTNIEDKSYFAQKIFSAQCIEE
+200 TLPYNGLQTNSNKNIQANTTLAFSFTMQNYPAFFQDFFEHFNLKKTSFDEFFIHSSDNFSKQKLYEKLNLNFTQDNILKNYGNTTINKLPLELASYAGGG
+300 DKQIFLGSFGTGITFNACSLKINFDKLQSFIKVL

[show detailed alignment]