Strain name: RM2100; ATCC BAA-1060D
Filepath: ../polyG/campy.new\40248-222538267.gb
Species: C. lari
Created: 2018-09-09 12:25:37 (W. Europe Summer Time)
TractNo | Contig | Location | Tract | On length | Gene Group | Offset from gene | Gene | Length | Function | NCTC 11168 | 81-176 | PT14 | 00-0949 | 00-1597 | 00-2425 | 00-2426 | 00-2538 | 00-2544 | 00-6200 | 01-1512 | 269.97 | 4031 | 32488 | 35925B2 | 81116; NCTC 11828 | CG8421 | CJ677CC519 | CJM1cam | F38011 | IA3902 | ICDCCJ07001 | M1 | MTVDSCj20 | NCTC11351 | OD267 | R14 | RM1221 | RM1285 | RM3194 | RM3196 | RM3197 | S3 | WP2202 | YH001 | 15-537360 | BFR-CA-9557 | CVM N29710 | FB1 | HC2-48 | OR12 | RM1875 | RM4661 | RM5611 | YH501 | 13826 | ATCC 33237 | 525.92 | 03-427 | 04/554 | 82-40 | 84-112 | 97/608 | SP3 | cfvi03/293 | pet-3 | ATCC 33236 | ATCC BAA-381 | CCUG 27631 | LMG 9260 | 1485E | 2463D | RM11343 | NCTC 12927 | CCUG 22395 | LMG 11760 | NCTC 11845 | RM2100; ATCC BAA-1060D | RM16701 | RM16712 | Slaughter Beach | LMG 23910 | RM16704 | LMG 24374 | LMG 24377 | RIGS 9880 | LMG 24379 |
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0 | CP000932 | 282453 | G10 | 9 | 467 | 0 | Cla_0310 | 648 | putative sugar transferase) | A911_06911 | CJSA_1356 | A0W68_03535 | A0W69_04580 | Cla_0310 | CSUB8521_0341 | CSUB8523_0324 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | CP000932 | 284815 | G9 | 10 | 19 | 0 | Cla_0312 | 255 | conserved hypothetical protein | Cj1420c | CJJ81176_1419 | A911_06906 | PJ16_07835 | N135_02250 | N564_02340 | N565_02420 | N755_02475 | PJ18_07255 | PJ19_07830 | JJD26997_1753 | BN867_06890 | M635_08895 | UC78_1362 | C8J_0641 | CJ8421_07145 | RC25_06635 | CJM1cam_0659 | CJH_07485 | CJSA_1351 | CJM1_0659 | MTVDSCj20_0698 | ERS445056_01536 | A0W68_03575 | H730_08055 | CjjRM1285_1416 | AXW77_06990 | A0W69_08260 | QZ67_01555 | AR446_04835 | YSQ_05930 | YSS_03110 | YSU_05580 | CFT03427_1580 | CFF04554_1630 | CFF8240_1628 | CSG_17620 | CFV97608_1755 | CFTSP3_1645 | CFVI03293_1652 | CR44_08030 | CINS_0302 | CONCH_1266 | UPTC3659_1405 | Cla_0312 | CD56_06730 | CSUB8521_0343 | CSUB8523_0326 | |||||||||||||||||||||||||||||
2 | CP000932 | 435935 | C10 | None | 438 | 170 | 170bp downstream of Cla_0459 | 225 | molybdenum ABC transporter, permease protein | CCC13826_2282 | CCON33237_1646 | CCV52592_0581 | CFT03427_0368 | CFF04554_0358 | CFF8240_0359 | CSG_4390 | CFV97608_0359 | CFTSP3_0368 | CFVI03293_0357 | CR44_01850 | CGRAC_0353 | CHAB381_0313 | CHL_1667 | CHH_1453 | CIG1485E_0418 | CIG2463D_0419 | CIG11343_0368 | CINS_0436 | UPTC4110_0457 | CONCH_0463 | UPTC3659_0478 | Cla_0459 | UPTC16701_0456 | UPTC16712_0464 | CD56_02280 | CPEL_0469 | CAQ16704_0476 | CSUB8521_0490 | CSUB8523_0476 | CUREO_0193 | CVOL_0450 | |||||||||||||||||||||||||||||||||||||||||||||
3 | CP000932 | 488141 | C9 | None | -1 | 120 | 120bp downstream of Cla_0516 | 4 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | CP000932 | 756373 | A10 | None | 468 | -21 | 21bp upstream of Cla_0795 | 438 | conserved hypothetical integral membrane protein, MATE family efflux protein | Cj0619 | CJJ81176_0648 | A911_03020 | PJ16_03085 | PJ17_03000 | N135_00671 | N564_00608 | N565_00653 | N755_00653 | PJ18_03090 | PJ19_03350 | JJD26997_1050 | BN867_06270 | M635_07450 | UC78_0601 | C8J_0579 | CJ8421_03025 | RC25_02980 | CJM1cam_0595 | CJH_03140 | CJSA_0587 | ICDCCJ07001_568 | CJM1_0595 | MTVDSCj20_0637 | ERS445056_00605 | A0W68_02915 | H730_03975 | CJE0722 | CjjRM1285_0591 | AXW77_03030 | CjjRM3196_0597 | CjjRM3197_0597 | CJS3_0609 | A0W69_03960 | QZ67_00635 | N149_0591 | AB430_04505 | G157_05660 | VC76_03120 | AR446_05105 | ATE51_02350 | YSQ_06205 | YSS_02835 | YSU_05850 | A6K30_05720 | CCC13826_0645 | CCON33237_1164 | CCV52592_0078 | CIG1485E_0679 | CIG2463D_0680 | CIG11343_0625 | CINS_0770 | UPTC4110_0816 | CONCH_0810 | UPTC3659_0913 | Cla_0795 | UPTC16701_0809 | UPTC16712_0814 | CD56_04335 | CPEL_0868 | CAQ16704_0744 | CSUB8521_0844 | CSUB8523_0931 | CVOL_0785 | |||||||||||||
5 | CP000932 | 757054 | G10 | 9 | 8 | 0 | Cla_0796 | 405 | conserved hypothetical protein (617 family) | Cj1305c Cj1310c Cj1306c | CJJ81176_1327 | A911_06345 A911_06340 A911_06370 A911_06365 | PJ16_07300 | PJ17_06905 PJ17_06940 | N135_01395 N135_02215 N135_01399 | N564_01328 N564_02220 N564_02225 | N565_02310 N565_02315 N565_01367 | N755_02375 N755_02365 N755_02370 | PJ18_06725 PJ18_06745 PJ18_06720 | PJ19_07300 | JJD26997_0416 JJD26997_0417 JJD26997_0408 JJD26997_0410 | BN867_12990 BN867_12950 | M635_02240 M635_02215 M635_02220 | UC78_1254 UC78_1259 | C8J_1243 | CJ8421_06495 CJ8421_06525 | RC25_06195 | CJM1cam_1282 | CJH_06630 CJH_06610 | CJSA_1243 CJSA_1244 CJSA_1248 | ICDCCJ07001_1254 ICDCCJ07001_1249 | CJM1_1282 | MTVDSCj20_1305 | ERS445056_01416 ERS445056_01422 ERS445056_01415 | A0W68_07045 A0W68_07055 A0W68_07025 | H730_07465 | CJE1495 CJE1504 | CjjRM1285_1324 CjjRM1285_1318 CjjRM1285_1320 | AXW77_06450 AXW77_06430 | CjjRM3196_1319 CjjRM3196_1324 | CjjRM3197_1324 CjjRM3197_1319 | CJS3_1409 CJS3_1400 | A0W69_07730 A0W69_07735 A0W69_07710 | QZ67_01441 QZ67_01445 QZ67_01439 | N149_1273 N149_1264 | AB430_08195 AB430_08215 | G157_02255 | VC76_06590 VC76_06540 | AR446_01600 AR446_01640 AR446_01635 | ATE51_00944 ATE51_00952 ATE51_00958 ATE51_00954 | YSQ_02335 YSQ_02295 | YSS_07120 YSS_07090 YSS_07075 YSS_07085 | YSU_02370 YSU_02365 YSU_02310 | A6K30_02275 A6K30_02310 | CINS_0778 CINS_1270 CINS_0772 CINS_0773 | CONCH_1270 | Cla_1317 Cla_1308 Cla_1315 Cla_0796 | CD56_06755 | CPEL_1412 | CAQ16704_1315 | CSUB8521_0851 CSUB8521_0846 CSUB8521_0853 CSUB8521_0852 | CSUB8523_0939 CSUB8523_0933 CSUB8523_0938 CSUB8523_0940 | CVOL_1290 CVOL_0789 CVOL_1300 | |||||||||||||||||||||||
6 | CP000932 | 1190000 | G9 | 9 | 469 | 0 | Cla_1236 | 296 | formyltransferase, putative | Cla_1236 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7 | CP000932 | 1192150 | A11 | 11 | 470 | 0 | Cla_1238 | 84 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8 | CP000932 | 1192161 | G11 | 11 | 471 | 0 | Cla_1238 | 84 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9 | CP000932 | 1254763 | G9 | 9 | 16 | 0 | Cla_1301 | 260 | conserved hypothetical protein | Cj1298 Cj1296 | CJJ81176_1315 | A911_06295 A911_06305 | PJ16_07260 PJ16_07265 | PJ17_06870 | N135_02210 N135_01386 | N564_02215 N564_01316 | N565_01353 N565_02305 | N755_01348 N755_02360 | PJ18_06680 PJ18_06685 | PJ19_07260 PJ19_07265 | JJD26997_0426 JJD26997_0425 | BN867_12890 | M635_02175 | UC78_1248 | C8J_1239 | CJ8421_06460 | RC25_06175 | CJM1cam_1278 | CJH_06565 CJH_06570 | CJSA_1236 CJSA_1234 | ICDCCJ07001_1244 | CJM1_1278 | MTVDSCj20_1302 | ERS445056_01407 | A0W68_06985 A0W68_06990 | H730_07430 | CJE1488 | CjjRM1285_1310 CjjRM1285_1311 | AXW77_06390 AXW77_06395 | CjjRM3196_1312 | CjjRM3197_1312 | CJS3_1394 | A0W69_07675 A0W69_07670 | QZ67_01432 QZ67_01431 | N149_1258 | AB430_08165 | G157_02335 | VC76_06505 | AR446_01675 | YSQ_02380 | YSS_07040 YSS_07035 | YSU_02405 | A6K30_02345 | CFT03427_1427 | CFF04554_1479 | CFF8240_1463 | CSG_16000 | CFV97608_1601 | CFTSP3_1491 | CFVI03293_1501 | CR44_07230 | CHL_1687 | CHH_1505 | CIG1485E_0403 | CIG11343_0352 | CINS_1264 | UPTC4110_1292 | CONCH_1254 | UPTC3659_1527 | Cla_1301 | UPTC16712_1308 | CD56_06700 | CPEL_1413 | CSUB8521_1490 CSUB8521_0847 | CSUB8523_0934 CSUB8523_1586 | CVOL_1291 CVOL_1281 | ||||||||||
10 | CP000932 | 1259809 | G9 | 9 | 8 | 0 | Cla_1307 | 410 | conserved hypothetical protein | Cj0617 | CJJ81176_0646 | A911_03015 | PJ16_03080 PJ16_07450 | PJ17_02995 PJ17_07090 | N135_01990 | N564_00606 | N565_00652 | N755_02060 | PJ18_03085 | PJ19_07445 PJ19_03345 | JJD26997_1051 JJD26997_0368 | BN867_13260 | M635_07445 M635_02400 | UC78_1285 | C8J_1258 | CJ8421_03015 | CJM1cam_1299 | CJH_03130 CJH_06730 | CJSA_0585 | ICDCCJ07001_1274 ICDCCJ07001_566 | CJM1_1299 | MTVDSCj20_1320 | ERS445056_00604 | A0W68_02910 | H730_07660 | CJE0720 CJE1531 | CjjRM1285_0590 | AXW77_06605 AXW77_03025 | CjjRM3196_1342 CjjRM3196_0596 | CjjRM3197_1342 CjjRM3197_0596 | CJS3_1436 CJS3_0607 | A0W69_03955 | QZ67_00633 | N149_0590 | AB430_08370 AB430_04500 | G157_02115 | VC76_06720 | AR446_01515 AR446_05110 | ATE51_00880 ATE51_02354 | YSQ_06210 YSQ_02145 | YSS_02830 YSS_07275 | YSU_02180 YSU_05855 | A6K30_05725 | CINS_0771 CINS_1271 CINS_0859 | CONCH_0811 CONCH_1260 | UPTC3659_0914 | Cla_1319 Cla_1307 Cla_0797 | UPTC16712_0815 | CPEL_0870 | CAQ16704_0743 | CSUB8521_1498 CSUB8521_0845 | CSUB8523_1594 CSUB8523_0932 | CVOL_0788 CVOL_1289 | |||||||||||||||||||||||
11 | CP000932 | 1261977 | G10 | 10 | 16 | 0 | Cla_1310 | 164 | conserved hypothetical protein | Cla_1310 | CPEL_1413 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12 | CP000932 | 1265785 | G11 | 12 | 45 | 0 | Cla_1314 | 336 | 3-oxoacyl-(acyl carrier protein) synthase III FabH2, putative | PJ17_06935 | N149_1272 | G157_02260 | VC76_06585 | AR446_01605 | YSQ_02305 | YSS_07110 | YSU_02320 | A6K30_02280 | Cla_1314 | CD56_06750 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13 | CP000932 | 1266516 | G9 | 9 | 8 | 0 | Cla_1315 | 81 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14 | CP000932 | 1268013 | G9 | 9 | 8 | 0 | Cla_1317 | 222 | No annotation data | Cla_1317 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15 | CP000932 | 1272614 | G9 | 9 | 110 | 0 | Cla_1322 | 163 | N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc | Cj1313 | N135_01402 | N564_01331 | N565_01370 | N755_01366 | CINS_1277 | UPTC4110_1301 | CONCH_1276 | UPTC3659_1537 | Cla_1322 Cla_1325 | UPTC16701_1295 | UPTC16712_1317 | CD56_06770 | CPEL_1427 | CAQ16704_1327 CAQ16704_1330 | CSUB8521_1507 CSUB8521_1504 | CSUB8523_1603 CSUB8523_1600 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
16 | CP000932 | 1478808 | G11 | 10 | 443 | 0 | Cla_1529 | 142 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
17 | CP000932 | 1517865 | TA10 | None | 4 | -50 | 50bp upstream of Cla_1564 | 225 | conserved hypothetical protein, possible methyltransferase | Cj0170 Cj1325 | CJJ81176_0206 | A911_06440 | PJ16_07375 PJ16_00860 | PJ17_07015 PJ17_00860 | N135_02220 N135_00227 | N564_01845 N564_02250 | N565_00159 N565_02340 | N755_01910 N755_02400 | PJ18_06815 PJ18_01130 | PJ19_00860 PJ19_07375 | JJD26997_0185 JJD26997_0387 | M635_08930 M635_02325 | CJH_00885 | CJSA_1262 CJSA_0160 | ERS445056_01437 ERS445056_00175 | A0W68_07125 | H730_07585 | AXW77_06530 | A0W69_07805 A0W69_01730 | QZ67_01462 QZ67_00236 | N149_1289 | AB430_08290 | G157_02190 | VC76_06655 | ATE51_00914 | YSQ_02220 | CINS_1497 CINS_1195 | CONCH_0464 | Cla_1564 | CSUB8521_1418 CSUB8521_0553 | CSUB8523_1518 CSUB8523_0539 | CVOL_0451 |