CSUB8521_0235 vs: Cj1318 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 1264.00 bits: 549.06 e-value: 0.000000
length: 649 gaps: 24 id: 331 positives: 421 coverage: 0.51 query coverage 0.52

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkylly---------PVLYFYGFGNGILYKALL +101
QK LF KN +AL N LKE L K F+++ G D LDIN L + + + +L PVLYFYGFGNGIL+KALL
Cj1318 +1246696 QKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +1246993

CS..1_0235 +102 QNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKG +201
QNKN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + Y ELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K IL G
Cj1318 +1246996 QNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNG +1247293

CS..1_0235 +202 NSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnn +301
N +DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN
Cj1318 +1247296 NDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNH +1247593

CS..1_0235 +302 dfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGK +401
DFG+FDKDIVF+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
Cj1318 +1247596 DFGEFDKDIVFICAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA +1247893

CS..1_0235 +402 YDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKEL +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E
Cj1318 +1247896 --NYESQMYEHILTE-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEF +1248193

CS..1_0235 +502 MLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTL +601
+LKA+YKV++ IK C IL + I N L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++
Cj1318 +1248196 LLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +1248493

CS..1_0235 +602 LWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +650
LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
Cj1318 +1248496 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1248640

CSUB8521_0235 vs: Cj1333 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: PseD protein

Score: 1321.00 bits: 573.65 e-value: 0.000000
length: 649 gaps: 24 id: 351 positives: 446 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
Cj1333 +1259707 QKELFNKNIEALSNLFLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1260004

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL TS +DI ++ CS+ PFF F R+YFL+L YYER++ED+L N+ + + K +ILS GN DAL G
Cj1333 +1260007 VFEKDIEIIWVIFHILDFSNELQSARLMILQTSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQG +1260304

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI
Cj1333 +1260307 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1260604

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTY +401
+FVLKS VHP T KYL+K + + +S F YL L DFGY MG SVA M ++LA+ L+HKNI+ IGQDLAYAKDG SH K+Y H G +
Cj1333 +1260607 LFVLKSYVHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDYSNLDKHEGHF--- +1260904

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKA +501
Q T YG V++S W LF+ E + N+K+ + +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA
Cj1333 +1260907 --QRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKA +1261204

CS..1_0235 +502 FYKVHKVIKICNILEKECLHIYNTL--NFLS-----NDETNFKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTL +601
+YKV++ IK C + + Y+ + F+S +ET K+II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++
Cj1333 +1261207 YYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNKSI +1261504

CS..1_0235 +602 LWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +650
LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
Cj1333 +1261507 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1261651

CSUB8521_0235 vs: CJJ81176_1336 in 81-176 (Campylobacter jejuni subsp. jejuni 81-176, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD

Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 649 gaps: 24 id: 330 positives: 424 coverage: 0.50 query coverage 0.51

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
CJ..6_1336 +1249433 QKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDNLDINLQNTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1249730

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVD----INIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
VFEK++E+I+ FH+LDFS EL+ LII++T ++ +N Y + + S F F R+YFL+L +YYERY E+IL N + IK +I+ GN S D
CJ..6_1336 +1249733 VFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKK--ANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIKISIIQYGNDSID +1250030

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
LMGI+ +IYNL +++ + L KR S AIIVSTGPSL KQLPLLKQYANKA+IFCADSAYPILAKH+IKPDYV LER D S+ F+NDF +F
CJ..6_1336 +1250033 NLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEF +1250330

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTY +401
DK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++ + K
CJ..6_1336 +1250333 DKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +1250630

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFY +501
Q+ + T+I YGG V++S W LF+ E I YN TEGGARI+GTIEKPF CE LL K L KPF KL LN NKQ ELMLKA+
CJ..6_1336 +1250633 HFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNINKQNELMLKAYN +1250930

CS..1_0235 +502 KVHKVIKICNILEKECLHIYN-------TLNFLSNDET----NFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKT +601
K++K I C K+ L+ YN TL L +E+ NF II+++D K +I+ +++L + PL QFELNLARIYVLNPKT ED+FNK+
CJ..6_1336 +1250933 KIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNF--IIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNPKTPEDSFNKS +1251230

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +650
L+WIKEHLEWI M+ H +A + L +NII L ++L+ + +++Y+++IK
CJ..6_1336 +1251233 LIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1251377

CSUB8521_0235 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 428 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
A911_06490 +1262983 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1263280

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
A911_06490 +1263283 NKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGN +1263580

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
A911_06490 +1263583 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1263880

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
A911_06490 +1263883 FGEFDKDIIFICAGVVHPKAIEYLKDR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1264180

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
A911_06490 +1264183 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1264480

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
A911_06490 +1264483 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1264780

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
A911_06490 +1264783 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1264924

CSUB8521_0235 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1275.00 bits: 553.81 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 429 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+
A911_06480 +1259174 QKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHII +1259471

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL G
A911_06480 +1259474 VFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQG +1259771

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
A911_06480 +1259774 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGI +1260071

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
A911_06480 +1260074 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1260371

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
A911_06480 +1260374 PH-LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1260671

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSk----iekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + + Y N+ L N + N ++II+ +D K++ L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
A911_06480 +1260674 KSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1260971

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
A911_06480 +1260974 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1261103

CSUB8521_0235 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 1299.00 bits: 564.16 e-value: 0.000000
length: 646 gaps: 21 id: 340 positives: 434 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQ
PJ16_07340 +1354388 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1354685

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+N LI+L+T ++I YNELCS PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN
PJ16_07340 +1354688 NKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGN +1354985

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
PJ16_07340 +1354988 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHD +1355285

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVF+ +VHP +YLK + ++ I F Y+ LK F ++ SVA M+Y L++ L HKNIIFIGQDLAYA++G SHP +Y+
PJ16_07340 +1355288 FGEFDKDIVFICAGVVHPKAIEYLKGRNRKYL-IIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1355585

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
Y Q ++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
PJ16_07340 +1355588 -NYESQMYEHILTE-AYGGKKEIKTHEFWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1355885

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV++ IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWI
PJ16_07340 +1355888 AYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1356185

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ16_07340 +1356188 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1356323

CSUB8521_0235 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1291.00 bits: 560.71 e-value: 0.000000
length: 644 gaps: 17 id: 339 positives: 433 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
PJ16_07410 +1367403 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1367700

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN DAL G
PJ16_07410 +1367703 VFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDPLDALQG +1368000

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
PJ16_07410 +1368003 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +1368300

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
PJ16_07410 +1368303 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1368600

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE I +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
PJ16_07410 +1368603 PH-LYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1368900

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + + Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
PJ16_07410 +1368903 QSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1369200

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ16_07410 +1369203 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1369332

CSUB8521_0235 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1299.00 bits: 564.16 e-value: 0.000000
length: 648 gaps: 21 id: 350 positives: 444 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY+ + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQ
PJ16_07420 +1371212 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1371509

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN
PJ16_07420 +1371512 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGN +1371809

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNND
PJ16_07420 +1371812 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNND +1372109

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-HYGK +401
FG+FDKD++FV S ++P T KYL+K + I T S F + L +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y K
PJ16_07420 +1372112 FGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILT-SRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDK +1372409

CS..1_0235 +402 YDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTS-TYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
++ + ++ + YGG V++SE W +F+ L+N I SK S TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
PJ16_07420 +1372412 HEGHFRRDKG-KFQCLAYGGNGKVESSEIWTMFRFSLQNTI--SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1372709

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
PJ16_07420 +1372712 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1373009

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ16_07420 +1373012 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1373153

CSUB8521_0235 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1286.00 bits: 558.55 e-value: 0.000000
length: 648 gaps: 23 id: 344 positives: 430 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
PJ17_06980 +1346493 QKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1346790

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN
PJ17_06980 +1346793 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGN +1347090

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
PJ17_06980 +1347093 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHD +1347390

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVFV +VHP +YLK + I T V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
PJ17_06980 +1347393 FGEFDKDIVFVCAGVVHPKAIEYLKG--KTFIIT-QKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1347690

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
PJ17_06980 +1347693 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1347990

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I N L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
PJ17_06980 +1347993 LKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1348290

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++K+++
PJ17_06980 +1348293 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMEKVRR +1348434

CSUB8521_0235 vs: PJ17_07050 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 1322.00 bits: 574.08 e-value: 0.000000
length: 649 gaps: 24 id: 351 positives: 447 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN ++L N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
PJ17_07050 +1359512 QKELFNKNIESLSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1359809

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L+T +I YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +ILS GN DAL G
PJ17_07050 +1359812 VFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQG +1360109

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI
PJ17_07050 +1360112 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1360409

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTY +401
+FVLKS VHP T KYL+K + + +S F YL L DFGY MG SVA M ++LA+ L+HKNI+ IGQDLAYAKDG SH K+Y H G +
PJ17_07050 +1360412 LFVLKSYVHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDYSNLDKHEGHF--- +1360709

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKA +501
Q T YG V++S W LF+ E + N+K+ + +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA
PJ17_07050 +1360712 --QRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKA +1361009

CS..1_0235 +502 FYKVHKVIKICNILEKECLHIYNTL--NFLS-----NDETNFKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTL +601
+YKV++ IK C + + Y+ + F+S +ET K+II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++
PJ17_07050 +1361012 YYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNKSI +1361309

CS..1_0235 +602 LWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +650
LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ17_07050 +1361312 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1361456

CSUB8521_0235 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 1282.00 bits: 556.83 e-value: 0.000000
length: 646 gaps: 21 id: 338 positives: 430 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
PJ17_07060 +1363330 QKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1363627

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+L+FS EL+ L++L+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN
PJ17_07060 +1363630 NKNHQHIVVFEKDIEIIWIMFHILNFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGN +1363927

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
PJ17_07060 +1363930 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHD +1364227

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVFV +VHP +YLK + ++ I F Y+ LK F ++ SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+
PJ17_07060 +1364230 FGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYL-IIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1364527

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
Y Q ++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
PJ17_07060 +1364530 -NYESQMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1364827

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV++ IK C IL + I N L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWI
PJ17_07060 +1364830 AYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1365127

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ17_07060 +1365130 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1365265

CSUB8521_0235 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1275.00 bits: 553.81 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 429 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+
N135_01421 +1337406 QKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHII +1337703

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL G
N135_01421 +1337706 VFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQG +1338003

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N135_01421 +1338006 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGI +1338303

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
N135_01421 +1338306 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1338603

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
N135_01421 +1338606 PH-LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1338903

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSk----iekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + + Y N+ L N + N ++II+ +D K++ L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
N135_01421 +1338906 KSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1339203

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N135_01421 +1339206 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339335

CSUB8521_0235 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 428 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
N135_01423 +1341215 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1341512

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N135_01423 +1341515 NKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGN +1341812

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
N135_01423 +1341815 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1342112

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
N135_01423 +1342115 FGEFDKDIIFICAGVVHPKAIEYLKDR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1342412

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
N135_01423 +1342415 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1342712

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
N135_01423 +1342715 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1343012

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N135_01423 +1343015 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343156

CSUB8521_0235 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1275.00 bits: 553.81 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 429 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+
N564_02285 +1299237 QKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHII +1299534

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL G
N564_02285 +1299537 VFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQG +1299834

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N564_02285 +1299837 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGI +1300134

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
N564_02285 +1300137 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1300434

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
N564_02285 +1300437 PH-LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1300734

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSk----iekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + + Y N+ L N + N ++II+ +D K++ L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
N564_02285 +1300737 KSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1301034

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N564_02285 +1301037 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1301166

CSUB8521_0235 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 428 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
N564_02295 +1303046 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1303343

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N564_02295 +1303346 NKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGN +1303643

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
N564_02295 +1303646 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1303943

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
N564_02295 +1303946 FGEFDKDIIFICAGVVHPKAIEYLKDR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1304243

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
N564_02295 +1304246 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1304543

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
N564_02295 +1304546 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1304843

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N564_02295 +1304846 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1304987

CSUB8521_0235 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 428 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
N565_02385 +1341602 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1341899

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N565_02385 +1341902 NKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGN +1342199

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
N565_02385 +1342202 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1342499

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
N565_02385 +1342502 FGEFDKDIIFICAGVVHPKAIEYLKDR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1342799

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
N565_02385 +1342802 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1343099

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
N565_02385 +1343102 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1343399

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N565_02385 +1343402 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343543

CSUB8521_0235 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1275.00 bits: 553.81 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 429 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+
N565_02375 +1337793 QKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHII +1338090

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL G
N565_02375 +1338093 VFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQG +1338390

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N565_02375 +1338393 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGI +1338690

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
N565_02375 +1338693 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1338990

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
N565_02375 +1338993 PH-LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1339290

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSk----iekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + + Y N+ L N + N ++II+ +D K++ L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
N565_02375 +1339293 KSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1339590

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N565_02375 +1339593 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339722

CSUB8521_0235 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 428 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
N755_02445 +1341585 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1341882

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N755_02445 +1341885 NKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGN +1342182

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
N755_02445 +1342185 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1342482

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
N755_02445 +1342485 FGEFDKDIIFICAGVVHPKAIEYLKDR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1342782

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
N755_02445 +1342785 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFL +1343082

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
N755_02445 +1343085 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1343382

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N755_02445 +1343385 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343526

CSUB8521_0235 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1275.00 bits: 553.81 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 429 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+
N755_02435 +1337776 QKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHII +1338073

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL G
N755_02435 +1338076 VFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQG +1338373

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N755_02435 +1338376 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGI +1338673

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
N755_02435 +1338676 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1338973

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
N755_02435 +1338976 PH-LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1339273

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSk----iekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + + Y N+ L N + N ++II+ +D K++ L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
N755_02435 +1339276 KSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1339573

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N755_02435 +1339576 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339705

CSUB8521_0235 vs: PJ18_06860 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1288.00 bits: 559.41 e-value: 0.000000
length: 648 gaps: 23 id: 340 positives: 427 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQ
PJ18_06860 +1302547 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1302844

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
PJ18_06860 +1302847 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1303144

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
PJ18_06860 +1303147 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1303444

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
F +FD+DIVF+ +VHP +YLK + V YY+ LKDF Y +G SVA M LA L HKNIIFIGQDLAYA++G SHP +Y+
PJ18_06860 +1303447 FREFDRDIVFICAGVVHPKAIEYLKGR---NLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1303744

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YG VKT W+LFK EN II N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
PJ18_06860 +1303747 -NYESQMYEHILTK-AYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1304044

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK++L
PJ18_06860 +1304047 LKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSIL +1304344

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ18_06860 +1304347 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1304488

CSUB8521_0235 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1294.00 bits: 562.00 e-value: 0.000000
length: 644 gaps: 17 id: 343 positives: 435 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
PJ18_06850 +1298738 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1299035

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
PJ18_06850 +1299038 VFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1299335

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF +FDKDI
PJ18_06850 +1299338 IEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDI +1299635

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L+HKNIIFIGQDLAYAK+G SHP +Y+ TY +
PJ18_06850 +1299638 CFIIKSVVHPNAINYLTK-KTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAH +1299935

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG VKT W++FK LE I +++ T YN TEGGARI+G IEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
PJ18_06850 +1299938 EPILTK-AYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1300235

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
PJ18_06850 +1300238 QSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1300535

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ18_06850 +1300538 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1300667

CSUB8521_0235 vs: PJ18_06785 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1279.00 bits: 555.53 e-value: 0.000000
length: 646 gaps: 17 id: 341 positives: 431 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQ
PJ18_06785 +1284816 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1285113

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
PJ18_06785 +1285116 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1285413

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFN D
PJ18_06785 +1285416 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNHD +1285713

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FD+D++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
PJ18_06785 +1285716 FGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1286013

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
PJ18_06785 +1286016 HEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1286313

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK++LWI
PJ18_06785 +1286316 AYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWI +1286613

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ18_06785 +1286616 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1286751

CSUB8521_0235 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 1299.00 bits: 564.16 e-value: 0.000000
length: 646 gaps: 21 id: 340 positives: 434 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQ
PJ19_07340 +1352999 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1353296

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+N LI+L+T ++I YNELCS PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN
PJ19_07340 +1353299 NKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGN +1353596

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
PJ19_07340 +1353599 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHD +1353896

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVF+ +VHP +YLK + ++ I F Y+ LK F ++ SVA M+Y L++ L HKNIIFIGQDLAYA++G SHP +Y+
PJ19_07340 +1353899 FGEFDKDIVFICAGVVHPKAIEYLKGRNRKYL-IIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1354196

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
Y Q ++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
PJ19_07340 +1354199 -NYESQMYEHILTE-AYGGKKEIKTHEFWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1354496

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV++ IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWI
PJ19_07340 +1354499 AYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1354796

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ19_07340 +1354799 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1354934

CSUB8521_0235 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1299.00 bits: 564.16 e-value: 0.000000
length: 648 gaps: 21 id: 350 positives: 444 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY+ + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQ
PJ19_07420 +1369823 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1370120

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN
PJ19_07420 +1370123 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGN +1370420

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNND
PJ19_07420 +1370423 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNND +1370720

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-HYGK +401
FG+FDKD++FV S ++P T KYL+K + I T S F + L +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y K
PJ19_07420 +1370723 FGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILT-SRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDK +1371020

CS..1_0235 +402 YDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTS-TYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
++ + ++ + YGG V++SE W +F+ L+N I SK S TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
PJ19_07420 +1371023 HEGHFRRDKG-KFQCLAYGGNGKVESSEIWTMFRFSLQNTI--SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1371320

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
PJ19_07420 +1371323 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1371620

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ19_07420 +1371623 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1371764

CSUB8521_0235 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1291.00 bits: 560.71 e-value: 0.000000
length: 644 gaps: 17 id: 339 positives: 433 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
PJ19_07410 +1366014 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1366311

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN DAL G
PJ19_07410 +1366314 VFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDPLDALQG +1366611

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
PJ19_07410 +1366614 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +1366911

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ +Y +
PJ19_07410 +1366914 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRY +1367211

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ L + YGG +KT W++FK LE I +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
PJ19_07410 +1367214 PH-LYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1367511

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + + Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
PJ19_07410 +1367514 QSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1367811

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
PJ19_07410 +1367814 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1367943

CSUB8521_0235 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor

Score: 1335.00 bits: 579.69 e-value: 0.000000
length: 646 gaps: 18 id: 353 positives: 434 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnsl---selneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L + K F+++ G D LDIN NGGGY+ EL LN Y DKYLLYPVLYFYGFGNGIL+KALLQ
JJ..7_0374 +331824 QKELFNKNIEALSNVFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQ +332121

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+N L+IL+ + YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K+ IL GN
JJ..7_0374 +331524 NKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETFKKVILMHGN +331821

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S DAL GIE ++YNLP +I+ S++ELL KRK S AIIVSTGPSL KQLPLLK+YA KA++FCADSAYPILAK+ I+PDYVLSLERV TSEFFNND
JJ..7_0374 +331224 DSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVLETSEFFNND +331521

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
F +FDKDI+FVLKS HP T KYL+K + + +S F YL L DFGY MG SVA MAY LAL L++KNII IGQDLAY+KDGSSHP E+ +G
JJ..7_0374 +330924 FKEFDKDILFVLKSYAHPHTTKYLQKNNRNFM-LVSTYANFINYLKLDDFGYFTMGFSVANMAYHLALLLQYKNIILIGQDLAYSKDGSSHPDEHIFGTL +331221

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
D + I Y L YGG V T E W LF++ E I N H TYN TEGGARIEG IEKPF CE LL K L KPF KLE L KQ E +LK
JJ..7_0374 +330624 DGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRSIFEQDITNY--HIPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLK +330921

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV + IK C IL + I L E I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKED FNK++LWI
JJ..7_0374 +330324 AYYKVCQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWI +330621

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L + ++++++
JJ..7_0374 +330024 KEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR +330159

CSUB8521_0235 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factor

Score: 1288.00 bits: 559.41 e-value: 0.000000
length: 647 gaps: 23 id: 344 positives: 433 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L + K F+++ G D LDIN L+ N + ELN LN YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IV
JJ..7_0376 +335627 QKELFNKNIEALGNIFLKESLKQIKSSKFELILGKDKLDINLKNTSDNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIV +335924

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + +Y K +ILS GN DAL G
JJ..7_0376 +335327 VFEKDIEIIWVIFHILDFSNELQNARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSILSHGNDPLDALQG +335624

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSLIKQLPLLK+YANKA+IFCADSAYPILAKH+IKPDYV LER +FT+EFFN DFG+FDKDI
JJ..7_0376 +335027 IEQFVYNLPSMITHPSYKELLAKRKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSEFTAEFFNHDFGEFDKDI +335324

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F Y+ L DFGY MG SVA MA L+L L+HKNIIFIGQDLAYAK+G SHP +Y+ TY +
JJ..7_0376 +334727 CFIIKSVVHPNAIHYLNK-KTDDFTLVSTYASFINYVKLDDFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAH +335024

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG VKT W++FK LE + +++ T YN TEGGARIEG IEKPF CE LL K L KPF KLE L KQ E +LKA+YKV
JJ..7_0376 +334427 EPILTK-AYGGKGEVKTHHIWLMFKQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPLSLKKQNEFLLKAYYKVC +334724

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN----------FKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLW +601
K I+ C + + Y N+ L N + N KI Q+D L +++ PL TQFELNLARIYVLNPKTKED FNK++LW
JJ..7_0376 +334127 KSIEHCRDFNDKFIKSYKKIKNSFMSLQNSQENEILVKKIIKNIDKIKTQIDELYN---TQKDLIQILGPLLTQFELNLARIYVLNPKTKEDVFNKSILW +334424

CS..1_0235 +602 IKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +648
IKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
JJ..7_0376 +333827 IKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLNKWMERVRR +333965

CSUB8521_0235 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factor

Score: 1336.00 bits: 580.12 e-value: 0.000000
length: 657 gaps: 32 id: 351 positives: 447 coverage: 0.53 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQ
BN.._13180 +1296001 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1296298

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L YYER+++DIL N+ + + K +I+S GN
BN.._13180 +1296301 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNSIVSHGN +1296598

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK+ S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNND
BN.._13180 +1296601 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNND +1296898

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FDKDI+FVLKS VHP T KYL+K + + +S F YL L DFGY MG SVA M ++LA+ L+HKNI+ IGQDLAY KDG SH K+Y
BN.._13180 +1296901 FGEFDKDILFVLKSYVHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSHTKDYSNLDK +1297198

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNK +501
H G + Q T YGG V++SE W LF+ E I+N K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NK
BN.._13180 +1297201 HEGHF-----QRDKNKYTTQAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1297498

CS..1_0235 +502 QKELMLKAFYKVHKVIKICNILEKECLHIYNTL--NFLS-----NDETNFKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTK +601
Q E +LKA+YKV++ IK C + +YN + F+S +E ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTK
BN.._13180 +1297501 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYNKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTK +1297798

CS..1_0235 +602 EDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +658
EDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++++ + L ++++++++
BN.._13180 +1297801 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR +1297969

CSUB8521_0235 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 1303.00 bits: 565.89 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 433 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
BN.._13200 +1299843 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1300140

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L YYER+++DIL N+ + + K +I+S GN
BN.._13200 +1300143 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNSIVSHGN +1300440

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK+ S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
BN.._13200 +1300443 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1300740

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+FV +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
BN.._13200 +1300743 FGEFDKDIIFVCAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1301040

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
TY Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
BN.._13200 +1301043 -TYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1301340

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I N L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
BN.._13200 +1301343 LKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1301640

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++++ + L ++++++++
BN.._13200 +1301643 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR +1301784

CSUB8521_0235 vs: M635_02360 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 1319.00 bits: 572.79 e-value: 0.000000
length: 649 gaps: 24 id: 353 positives: 445 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
M635_02360 +444755 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +445052

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL+T +I YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +ILS GN DAL G
M635_02360 +445055 VFEKDIEIIWVIFHILDFSNELQSARLMILNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQG +445352

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI
M635_02360 +445355 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +445652

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTY +401
VFVLKS VHP T KYL+K + + +S F YL L DFGY MG SVA M ++LA+ L+HKNI+ IGQDLAYAKDG SH K+Y H G +
M635_02360 +445655 VFVLKSYVHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDYSNLDKHEGHF--- +445952

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKA +501
Q T YG V++S W LF+ E + N+K+ + +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA
M635_02360 +445955 --QRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKA +446252

CS..1_0235 +502 FYKVHKVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTL +601
+YKV++ IK C + + Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++
M635_02360 +446255 YYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSI +446552

CS..1_0235 +602 LWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +650
LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
M635_02360 +446555 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +446699

CSUB8521_0235 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD protein

Score: 1236.00 bits: 536.98 e-value: 0.000000
length: 565 gaps: 13 id: 306 positives: 397 coverage: 0.52 query coverage 0.48

CS..1_0235 +75 PVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL +174
PVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L
M635_02285 +431982 PVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVL +432279

CS..1_0235 +175 TTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKP +274
N+ + + K +I+S GN DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKP
M635_02285 +432282 ELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKP +432579

CS..1_0235 +275 DYVLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQD +374
DYV LER + T+EFFN DFG+FDKD++FV +VHP +YLK + ++ T + F Y+ LK F ++ SVA M+Y L++ L HKNIIFIGQD
M635_02285 +432582 DYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLY-FPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQD +432879

CS..1_0235 +375 LAYAKDGSSHPKEYHYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkk +474
LAYA++G SHP +Y+ Y Q ++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L K
M635_02285 +432882 LAYAENGNSHPDDYQNSA--NYENQMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNK +433179

CS..1_0235 +475 pfvkleklNQNKQKELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARI +574
PF KLE L NKQ E +LKA+YKV++ IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARI
M635_02285 +433182 PFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARI +433479

CS..1_0235 +575 YVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
YVLNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
M635_02285 +433482 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +433674

CSUB8521_0235 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 1281.00 bits: 556.40 e-value: 0.000000
length: 638 gaps: 11 id: 345 positives: 434 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
M635_02370 +448573 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +448870

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL+TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
M635_02370 +448873 VFEKDIEIIWVIFHILDFSSELQSARLMILNTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +449170

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI
M635_02370 +449173 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +449470

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
VFV +VHP T +YLK + I T + F YY+ LK+F Y +G SVA MAY A L +KNIIFIGQDLAYA+DG SH K+Y Q
M635_02370 +449473 VFVCAGVVHPKTIEYLK--NKTFIIT-QKILAFPYYINLKNFCYAAIGFSVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRD +449770

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
+ YGG ++SE W +F+ L++ I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV++
M635_02370 +449773 KGKFQCLAYGGNGKAESSEVWTMFRFFLQDTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +450070

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I N L E + I ++D FK K+E I +++L + L T QFELNLARIYVLNPKTKEDAFNK++LWIKEHLE +
M635_02370 +450073 IKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFME +450370

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
M635_02370 +450373 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +450484

CSUB8521_0235 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 1279.00 bits: 555.53 e-value: 0.000000
length: 646 gaps: 17 id: 342 positives: 431 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQ
UC78_1278 +1249162 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1249459

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L +YYER++EDIL N+ + + K IL GN
UC78_1278 +1249462 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNIILRNGN +1249759

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNND
UC78_1278 +1249762 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNND +1250059

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDK+++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY + L KNIIFIGQDLAYAKDG SH K+Y
UC78_1278 +1250062 FGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1250359

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
UC78_1278 +1250362 HEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1250659

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKED FNK +LWI
UC78_1278 +1250662 AYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKNILWI +1250959

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
UC78_1278 +1250962 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1251097

CSUB8521_0235 vs: UC78_1267 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 1295.00 bits: 562.43 e-value: 0.000000
length: 648 gaps: 21 id: 336 positives: 426 coverage: 0.52 query coverage 0.52

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
UC78_1267 +1234965 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1235262

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L +YYER++EDIL N+ + + K IL GN
UC78_1267 +1235265 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNIILRNGN +1235562

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKHDIKPDYV LER T+EFFN D
UC78_1267 +1235565 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVCMLERKAITAEFFNHD +1235862

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FD I F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+
UC78_1267 +1235865 FGEFDNGICFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1236162

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
+Y + + L + YGG +KT W++FK LE + +++ YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
UC78_1267 +1236165 -SYESRRYPH-LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDAKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1236462

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKED FNK +L
UC78_1267 +1236465 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKNIL +1236762

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
UC78_1267 +1236765 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1236906

CSUB8521_0235 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical protein

Score: 1274.00 bits: 553.38 e-value: 0.000000
length: 655 gaps: 31 id: 341 positives: 436 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQ
UC78_1276 +1245329 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1245626

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L +YYER++EDIL N+ + + K +I+S GN
UC78_1276 +1245629 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENFKNSIVSYGN +1245926

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNND
UC78_1276 +1245929 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNND +1246226

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FDK+++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY + L KNIIFIGQDLAYAKDG SH K+Y
UC78_1276 +1246229 FGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1246526

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQK +501
H G + Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
UC78_1276 +1246529 HEGHF-----QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1246826

CS..1_0235 +502 ELMLKAFYKVHKVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKED +601
E +LKA+YKV K I+ C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKED
UC78_1276 +1246829 EFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKED +1247126

CS..1_0235 +602 AFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +656
FNK +LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
UC78_1276 +1247129 VFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1247291

CSUB8521_0235 vs: C8J_1253 in 81116; NCTC 11828 (Campylobacter jejuni subsp. jejuni 81116, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 649 gaps: 24 id: 330 positives: 424 coverage: 0.50 query coverage 0.51

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
C8J_1253 +1261855 QKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1262152

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVD----INIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
VFEK++E+I+ FH+LDFS EL+ LII++T ++ +N Y + + S F F R+YFL+L +YYERY E+IL N + IK +I+ GN S D
C8J_1253 +1262155 VFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKK--ANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIKISIIQYGNDSID +1262452

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
LMGI+ +IYNL +++ + L KR S AIIVSTGPSL KQLPLLKQYANKA+IFCADSAYPILAKH+IKPDYV LER D S+ F+NDF +F
C8J_1253 +1262455 NLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEF +1262752

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTY +401
DK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++ + K
C8J_1253 +1262755 DKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +1263052

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFY +501
Q+ + T+I YGG V++S W LF+ E I YN TEGGARI+GTIEKPF CE LL K L KPF KL LN NKQ ELMLKA+
C8J_1253 +1263055 HFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNINKQNELMLKAYN +1263352

CS..1_0235 +502 KVHKVIKICNILEKECLHIYN-------TLNFLSNDET----NFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKT +601
K++K I C K+ L+ YN TL L +E+ NF II+++D K +I+ +++L + PL QFELNLARIYVLNPKT ED+FNK+
C8J_1253 +1263355 KIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNF--IIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNPKTPEDSFNKS +1263652

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +650
L+WIKEHLEWI M+ H +A + L +NII L ++L+ + +++Y+++IK
C8J_1253 +1263655 LIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1263799

CSUB8521_0235 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factor

Score: 1269.00 bits: 551.22 e-value: 0.000000
length: 640 gaps: 10 id: 348 positives: 435 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLY YGFGNGIL+KALLQNKN Q IV
CJ.._06665 +1261529 QKELFNKNIEALGNILLKESLKKIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGILFKALLQNKNHQHIV +1261826

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN DAL G
CJ.._06665 +1261829 VFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQG +1262126

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI
CJ.._06665 +1262129 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1262426

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
+F++KS+ HP T KYL+K + I +S F YL L FGY MG SVA M+Y+L L +KNII IGQDLAYAKDG SH K+Y Q
CJ.._06665 +1262429 MFIVKSVTHPHTIKYLQKNNRAFI-LVSTYASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDYKNLDKHEGHFQRD +1262726

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENII--LNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ YGG V++SE W +F+ EN I +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
CJ.._06665 +1262729 KGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1263026

CS..1_0235 +502 KVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEW +601
K I+ C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWIKEHLE
CJ.._06665 +1263029 KSIEHCRDFSKILSNDFKKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEF +1263326

CS..1_0235 +602 ILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +641
+ ++ H KA + L KNI+ L ++L+ + L ++++++++
CJ.._06665 +1263329 MELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1263446

CSUB8521_0235 vs: RC25_06245 in CJ677CC519 (Campylobacter jejuni strain CJ677CC519, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 649 gaps: 24 id: 333 positives: 425 coverage: 0.51 query coverage 0.52

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
RC25_06245 +1195365 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKNTNDNTFLYGNVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1195662

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDT---SLVDI-NIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
VFEK++E+I++ FH+LDFS EL+ LII++T S D+ N Y + + S F F R+YFL+L +YYERY E+IL N + IK +I+ GN S D
RC25_06245 +1195665 VFEKDIEIIWVMFHILDFSNELQKNNLIIINTNILSEFDLSNFYKK--ANSIFLQFSRIYFLELISNYYERYNEEILKLNNTILSTIKISIIQYGNDSID +1195962

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
LMGI+ +IYNL +++ + L KR S AIIVSTGPSL KQLPLLKQYANKA+IFCADSAYPILAKH+IKPDYV LER D S+ F+NDF +F
RC25_06245 +1195965 NLMGIKHFIYNLSKLLTHPYSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEF +1196262

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTY +401
DK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++ + K
RC25_06245 +1196265 DKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +1196562

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFY +501
Q+ + T+ YGG V++S W LF+ E I K YN TEGGARIEGTIEKPF CE LL+K L KPF KL LN NKQ ELMLK +
RC25_06245 +1196565 HFQKDENLFTSTAYGGKDKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYN +1196862

CS..1_0235 +502 KVHKVIKICNILEKECLHIYN-------TLNFLSNDET----NFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKT +601
K++K I C K+ L+ YN TL L +E+ NF II+++D K +I+ +++L + PL QFELNLARIYVLNPKT ED+FNK+
RC25_06245 +1196865 KIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNF--IIQKIDIVKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNPKTLEDSFNKS +1197162

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +650
L+WIKEHLEWI M+ H +A + L +NII L ++LE + +++Y+++IK
RC25_06245 +1197165 LIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLEERKMQKYLERIK +1197309

CSUB8521_0235 vs: CJM1cam_1292 in CJM1cam (Campylobacter jejuni strain CJM1cam, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor Maf-3/PseD

Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 649 gaps: 24 id: 330 positives: 424 coverage: 0.50 query coverage 0.51

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
CJ..m_1292 +1256155 QKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1256452

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVD----INIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
VFEK++E+I+ FH+LDFS EL+ LII++T ++ +N Y + + S F F R+YFL+L +YYERY E+IL N + IK +I+ GN S D
CJ..m_1292 +1256455 VFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKK--ANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIKISIIQYGNDSID +1256752

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
LMGI+ +IYNL +++ + L KR S AIIVSTGPSL KQLPLLKQYANKA+IFCADSAYPILAKH+IKPDYV LER D S+ F+NDF +F
CJ..m_1292 +1256755 NLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEF +1257052

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTY +401
DK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++ + K
CJ..m_1292 +1257055 DKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +1257352

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFY +501
Q+ + T+I YGG V++S W LF+ E I YN TEGGARI+GTIEKPF CE LL K L KPF KL LN NKQ ELMLKA+
CJ..m_1292 +1257355 HFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNINKQNELMLKAYN +1257652

CS..1_0235 +502 KVHKVIKICNILEKECLHIYN-------TLNFLSNDET----NFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKT +601
K++K I C K+ L+ YN TL L +E+ NF II+++D K +I+ +++L + PL QFELNLARIYVLNPKT ED+FNK+
CJ..m_1292 +1257655 KIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNF--IIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNPKTPEDSFNKS +1257952

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +650
L+WIKEHLEWI M+ H +A + L +NII L ++L+ + +++Y+++IK
CJ..m_1292 +1257955 LIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1258099

CSUB8521_0235 vs: CJH_06700 in F38011 (Campylobacter jejuni subsp. jejuni F38011, complete genome.)
Gene length: 1962bp / 654aa PV: Yes
Function: PseD protein

Score: 1256.00 bits: 545.61 e-value: 0.000000
length: 649 gaps: 18 id: 343 positives: 435 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
Q LF KN +L N LKEKL ++++ G D LDIN LY +S+ EL+ L YN+KYLLYPVLYFYGFGNGIL+KALL+NK + +V
CJH_06700 +1267881 QTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLDINLKDTKNHTFLYQDSIKELDIMLKTYNEKYLLYPVLYFYGFGNGILFKALLKNKHHKHLV +1268178

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
+FEKELE+I + FHLLDFS+EL+ L+ILD ++ Y +LCSTSPFF F R YFL+L DYYE+ QE+IL N N+ K IL KGN +DAL G
CJH_06700 +1268181 IFEKELEIIKIMFHLLDFSQELEENRLLILDVNSLEFQDYYDLCSTSPFFEFSRTYFLELSSDYYEKDQEEILNLNNNLMDRFKNTILLKGNDPKDALQG +1268478

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE IYNLP +++ ++ LL +R+N S AIIVSTGPSL KQL LKQYANKA+I AD++YPILAKH IKPDYVLSLER+ TS+FF+N+FGDFDKDI
CJH_06700 +1268481 IEQLIYNLPVLLTHAPYQNLLKQRENLSDTAIIVSTGPSLAKQLDTLKQYANKATIIAADASYPILAKHGIKPDYVLSLERILSTSKFFDNNFGDFDKDI +1268778

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
+F+ L HP T K LK + + + F YYL LK FG G SVA +AY LA+ L+HKNIIFIGQDLAYA+DGSSHP E+ YG YD + +I
CJH_06700 +1268781 LFITTHLTHPQTIKKLKNNNRNFLLSYKG-SEFIYYLKLKQFGEFVEGHSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSHPSEHIYGNYDAVDKNKI +1269078

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
Y L + YGG V T E W +F+ LE I +K+ +TYN TEGGARIEG IEKPFK++CE LL + LKKPF K+E LN++KQ EL+LK++YK++
CJH_06700 +1269081 TYHLKTLAYGGKNMVYTKEAWNVFRGILEKHISQTKRLKLCTTYNCTEGGARIEGAIEKPFKELCETLLKEDLKKPFPKVEALNKDKQDELLLKSYYKIY +1269378

CS..1_0235 +502 KVIKICNILEKECLHIYN-------TLNFLSNDETNFKKI----IEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLW +601
K IK C + L YN LN +SN KKI I+++D K K+E + +L + PL TQFELNLARIYVLNPKT ED++NK+LLW
CJH_06700 +1269381 KSIKHCKDFSDKLLKSYNHILESFSNLNLISNLNEG-KKILNYLIQEIDKIKFKLEDGKNMLDLYEILGPLLTQFELNLARIYVLNPKTPEDSYNKSLLW +1269678

CS..1_0235 +602 IKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKKVK +650
+KEH+E M+ ++ KA + L +NI L EL +NL +Y +KIK K
CJH_06700 +1269681 VKEHIEFFDMVYEYIKAQEKALIENITPLENELTQRNLEKYKRKIKNAK +1269825

CSUB8521_0235 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 1289.00 bits: 559.85 e-value: 0.000000
length: 651 gaps: 27 id: 345 positives: 435 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQ
CJSA_1271 +1268728 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1269025

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
CJSA_1271 +1269028 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1269325

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN D
CJSA_1271 +1269328 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHD +1269625

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FD+D++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
CJSA_1271 +1269628 FGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1269925

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQK +501
H G + Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
CJSA_1271 +1269928 HEGHF-----QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1270225

CS..1_0235 +502 ELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNK +601
E +LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK
CJSA_1271 +1270228 EFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNK +1270525

CS..1_0235 +602 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +652
++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CJSA_1271 +1270528 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1270678

CSUB8521_0235 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 1289.00 bits: 559.85 e-value: 0.000000
length: 651 gaps: 27 id: 345 positives: 435 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQ
CJSA_1256 +1250998 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1251295

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
CJSA_1256 +1251298 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1251595

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN D
CJSA_1256 +1251598 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHD +1251895

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FD+D++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
CJSA_1256 +1251898 FGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1252195

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQK +501
H G + Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
CJSA_1256 +1252198 HEGHF-----QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1252495

CS..1_0235 +502 ELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNK +601
E +LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK
CJSA_1256 +1252498 EFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNK +1252795

CS..1_0235 +602 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +652
++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CJSA_1256 +1252798 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1252948

CSUB8521_0235 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 1294.00 bits: 562.00 e-value: 0.000000
length: 644 gaps: 17 id: 343 positives: 435 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
CJSA_1269 +1264919 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1265216

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
CJSA_1269 +1265219 VFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1265516

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF +FDKDI
CJSA_1269 +1265519 IEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDI +1265816

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L+HKNIIFIGQDLAYAK+G SHP +Y+ TY +
CJSA_1269 +1265819 CFIIKSVVHPNAINYLTK-KTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAH +1266116

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG VKT W++FK LE I +++ T YN TEGGARI+G IEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
CJSA_1269 +1266119 EPILTK-AYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1266416

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
CJSA_1269 +1266419 QSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1266716

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CJSA_1269 +1266719 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1266848

CSUB8521_0235 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function family

Score: 1076.00 bits: 467.97 e-value: 0.000000
length: 500 gaps: 10 id: 274 positives: 341 coverage: 0.57 query coverage 0.43

CS..1_0235 +141 YNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPS +240
+ CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPS
IC..1_1265 +1288420 FSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPS +1288717

CS..1_0235 +241 LIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL +340
L KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV TSEFFNNDF +FDKD+ FVLKS HP T KYL+K + + +S F YL L
IC..1_1265 +1288720 LTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFM-LVSTYASFINYLKL +1289017

CS..1_0235 +341 KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH- +440
DFGY +MG SVA MAY L+L L+HKNIIFIGQDLAYAK+G SHP E+ +G D + I Y L YGG V T E W LF+ E + +++
IC..1_1265 +1289020 DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +1289317

CS..1_0235 +441 -TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIE +540
T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV K IK C IL + I L E + IE
IC..1_1265 +1289320 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +1289617

CS..1_0235 +541 QLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +640
++D FK K+E + +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L +++++++
IC..1_1265 +1289620 KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE +1289917

CSUB8521_0235 vs: CJM1_1292 in M1 (Campylobacter jejuni subsp. jejuni M1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor

Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 649 gaps: 24 id: 330 positives: 424 coverage: 0.50 query coverage 0.51

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
CJM1_1292 +1256145 QKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1256442

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVD----INIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
VFEK++E+I+ FH+LDFS EL+ LII++T ++ +N Y + + S F F R+YFL+L +YYERY E+IL N + IK +I+ GN S D
CJM1_1292 +1256445 VFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKK--ANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIKISIIQYGNDSID +1256742

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
LMGI+ +IYNL +++ + L KR S AIIVSTGPSL KQLPLLKQYANKA+IFCADSAYPILAKH+IKPDYV LER D S+ F+NDF +F
CJM1_1292 +1256745 NLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEF +1257042

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTY +401
DK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++ + K
CJM1_1292 +1257045 DKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +1257342

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFY +501
Q+ + T+I YGG V++S W LF+ E I YN TEGGARI+GTIEKPF CE LL K L KPF KL LN NKQ ELMLKA+
CJM1_1292 +1257345 HFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNINKQNELMLKAYN +1257642

CS..1_0235 +502 KVHKVIKICNILEKECLHIYN-------TLNFLSNDET----NFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKT +601
K++K I C K+ L+ YN TL L +E+ NF II+++D K +I+ +++L + PL QFELNLARIYVLNPKT ED+FNK+
CJM1_1292 +1257645 KIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNF--IIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNPKTPEDSFNKS +1257942

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +650
L+WIKEHLEWI M+ H +A + L +NII L ++L+ + +++Y+++IK
CJM1_1292 +1257945 LIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1258089

CSUB8521_0235 vs: MTVDSCj20_1315 in MTVDSCj20 (Campylobacter jejuni subsp. jejuni strain MTVDSCj20, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1114.00 bits: 484.36 e-value: 0.000000
length: 649 gaps: 24 id: 330 positives: 424 coverage: 0.50 query coverage 0.51

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
MT..0_1315 +1291242 QKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1291539

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVD----INIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
VFEK++E+I+ FH+LDFS EL+ LII++T ++ +N Y + + S F F R+YFL+L +YYERY E+IL N + IK +I+ GN S D
MT..0_1315 +1291542 VFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKK--ANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTIKISIIQYGNDSID +1291839

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
LMGI+ +IYNL +++ + L KR S AIIVSTGPSL KQLPLLKQYANKA+IFCADSAYPILAKH+IKPDYV LER D S+ F+NDF +F
MT..0_1315 +1291842 NLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDIVSKCFDNDFKEF +1292139

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTY +401
DK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++ + K
MT..0_1315 +1292142 DKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +1292439

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFY +501
Q+ + T+I YGG V++S W LF+ E I YN TEGGARI+GTIEKPF CE LL K L KPF KL LN NKQ ELMLKA+
MT..0_1315 +1292442 HFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNINKQNELMLKAYN +1292739

CS..1_0235 +502 KVHKVIKICNILEKECLHIYN-------TLNFLSNDET----NFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKT +601
K++K I C K+ L+ YN TL L +E+ NF II+++D K +I+ +++L + PL QFELNLARIYVLNPKT ED+FNK+
MT..0_1315 +1292742 KIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNF--IIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNPKTPEDSFNKS +1293039

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +650
L+WIKEHLEWI M+ H +A + L +NII L ++L+ + +++Y+++IK
MT..0_1315 +1293042 LIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIK +1293186

CSUB8521_0235 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD protein

Score: 1301.00 bits: 565.02 e-value: 0.000000
length: 644 gaps: 17 id: 343 positives: 438 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
ER.._01444 +1370982 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1371279

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN DAL G
ER.._01444 +1371282 VFEKDIEIIWIMFHILDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYSIVSHGNDPLDALQG +1371579

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+ +LL KRKN S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER +FT+EFFN DFG+FD+++
ER.._01444 +1371582 IEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDREV +1371879

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L+HKNIIFIGQDLAYAK+G SHP +Y+ TY +
ER.._01444 +1371882 CFIIKSVVHPNAINYLTK-KTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAH +1372179

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG VKT W++FK LE I +++ T YN TEGGARI+G IEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
ER.._01444 +1372182 EPILTK-AYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1372479

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
ER.._01444 +1372482 QSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1372779

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
ER.._01444 +1372782 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1372911

CSUB8521_0235 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 651 gaps: 27 id: 345 positives: 436 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQ
ER.._01446 +1374791 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1375088

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
ER.._01446 +1375091 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1375388

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNND
ER.._01446 +1375391 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNND +1375688

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FD+D++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
ER.._01446 +1375691 FGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1375988

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQK +501
H G + Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
ER.._01446 +1375991 HEGHF-----QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1376288

CS..1_0235 +502 ELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNK +601
E +LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK
ER.._01446 +1376291 EFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNK +1376588

CS..1_0235 +602 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +652
++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
ER.._01446 +1376591 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1376741

CSUB8521_0235 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 1288.00 bits: 559.41 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 429 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQ
ER.._01430 +1357067 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1357364

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
ER.._01430 +1357367 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1357664

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+ +LL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAKHDIKPDYV LER +FT+EFFN D
ER.._01430 +1357667 DSTDTLQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSEFTAEFFNHD +1357964

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FD+DIVF+ +VHP +YLK + V YY+ LKDF Y +G SVA M LA L HKNIIFIGQDLAYA++G SHP +Y+
ER.._01430 +1357967 FGEFDRDIVFICAGVVHPKAIEYLKGR---NLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1358264

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YG VKT W+LFK EN II N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
ER.._01430 +1358267 -NYESQMYEHILTK-AYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1358564

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK++L
ER.._01430 +1358567 LKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSIL +1358864

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
ER.._01430 +1358867 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1359008

CSUB8521_0235 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factor

Score: 1294.00 bits: 562.00 e-value: 0.000000
length: 644 gaps: 17 id: 342 positives: 438 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHN-GGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQNKNR +101
QK LF KN +AL N LKE L + + F+++ G D LDIN N GGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQNKN
H730_07620 +1368483 QKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNH +1368780

CS..1_0235 +102 QKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+TS +DI ++ CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN D
H730_07620 +1368783 QHIVVFEKDIEIIWIMFHILDFSSELQSARLMILETSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLD +1369080

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
AL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER+ T+EFFNNDFG+F
H730_07620 +1369083 ALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERIPLTAEFFNNDFGEF +1369380

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-HYGKYDTY +401
DKDI+FV+KS V+P T KYL+K + I T S F + L +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y K++ +
H730_07620 +1369383 DKDILFVIKSWVYPQTIKYLQKNNRAFILT-SRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGH +1369680

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTS-TYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAF +501
++ + YGG V++SE W +F+ L+N I SK S TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+
H730_07620 +1369683 FRRDKG-KFQCLAYGGNGKVESSEIWTMFRFSLQNTI--SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAY +1369980

CS..1_0235 +502 YKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK++LWIKE
H730_07620 +1369983 YKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKE +1370280

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
H730_07620 +1370283 HLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +1370412

CSUB8521_0235 vs: H730_07630 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: motility accessory factor

Score: 1282.00 bits: 556.83 e-value: 0.000000
length: 644 gaps: 19 id: 341 positives: 429 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHN-GGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQNKNR +101
QK LF KN +AL N LKE L + + F+++ G D LDIN N GGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQNKN
H730_07630 +1372292 QKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNH +1372589

CS..1_0235 +102 QKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN S D
H730_07630 +1372592 QHIVVFEKDIEIIWIMFHILDFSSELQSARLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDSAD +1372889

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + +EFFNNDFG+F
H730_07630 +1372892 TLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAEFFNNDFGEF +1373189

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYN +401
DKDIVF+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+ Y
H730_07630 +1373192 DKDIVFICAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYE +1373489

CS..1_0235 +402 PQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAF +501
Q ++ LT YGG VKT W+LFK EN II N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+
H730_07630 +1373492 SQMYEHILTK-AYGGKEEVKTHAIWILFKKYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAY +1373789

CS..1_0235 +502 YKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK++LWIKE
H730_07630 +1373792 YKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKE +1374089

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
H730_07630 +1374092 HLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +1374221

CSUB8521_0235 vs: CJE1522 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: motility accessory factor

Score: 1312.00 bits: 569.77 e-value: 0.000000
length: 650 gaps: 26 id: 349 positives: 445 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IV
CJE1522 +1412458 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIV +1412755

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
CJE1522 +1412758 VFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQG +1413055

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFNNDFG+FDKDI
CJE1522 +1413058 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDFGEFDKDI +1413355

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTY +401
VF++KS+ HP T KYL+K + I +S F YL L FGY MG SVA M ++L + L++KNII IGQDLAYAKDG +H + + H G Y+
CJE1522 +1413358 VFIVKSVTHPHTIKYLQKNNRAFI-LVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYE-- +1413655

CS..1_0235 +402 NPQEID-YSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
+++D +S TA YGG V++SE W LF+ E I+N K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
CJE1522 +1413658 --RDLDRFSTTA--YGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1413955

CS..1_0235 +502 AFYKVHKVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKT +601
A+YKV++ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK+
CJE1522 +1413958 AYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKS +1414255

CS..1_0235 +602 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +651
+LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CJE1522 +1414258 ILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1414405

CSUB8521_0235 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factor

Score: 1291.00 bits: 560.71 e-value: 0.000000
length: 638 gaps: 13 id: 346 positives: 433 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IV
CJE1524 +1416276 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIV +1416573

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
CJE1524 +1416576 VFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQG +1416873

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFNNDFG+FDKDI
CJE1524 +1416876 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDFGEFDKDI +1417173

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
VFV +VHP +YLK + ++ I F Y+ LK F ++ SVA M+Y L++ L HKNII IGQDLAYA++G SHP +Y+ Y Q
CJE1524 +1417176 VFVCSGVVHPKAIEYLKGRNRKYL-IIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSHPDDYQNSA--NYESQMY +1417473

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV K
CJE1524 +1417476 EHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1417773

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWIKEHLE +
CJE1524 +1417776 IKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFME +1418073

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
CJE1524 +1418076 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1418187

CSUB8521_0235 vs: CjjRM1285_1333 in RM1285 (Campylobacter jejuni subsp. jejuni strain RM1285, complete genome.)
Gene length: 1968bp / 656aa PV: No
Function: motility accessory factor (function unknown)

Score: 1202.00 bits: 522.32 e-value: 0.000000
length: 650 gaps: 28 id: 340 positives: 426 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
Q LF +N AL NT LKE L + K F+++ G D LDIN LY N++ ELN LN+YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
Cj..5_1333 +1294854 QIKLFNRNINALNNTVLKESLKQIKSSKFELILGKDNLDINLKNTSDNTFLYKNAIDELNSMLNIYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1295151

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEKELE+I + HL+DFS+ELK LIILD ++ Y +LCS+ PFF F R YFL+L DYYE+ ++ IL N+++ + K +IL GN S+D L G
Cj..5_1333 +1295154 VFEKELEIIKIMLHLMDFSQELKENKLIILDINSLEFQDYYDLCSSNPFFQFSRTYFLELSSDYYEKDKKYILKLNKDLIEKFKNSILLYGNDSKDNLQG +1295451

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE IYNLP +I+ ++++ L KR+N S AIIVSTGPSL KQLP+LK+YANKA+I ADS+YPILAKHDIKPDYV+SLER+ TSEFFNN+FGDFDKDI
Cj..5_1333 +1295454 IEQLIYNLPKMITHTAYQDFLKKRENLSDTAIIVSTGPSLTKQLPILKKYANKATIISADSSYPILAKHDIKPDYVVSLERILLTSEFFNNNFGDFDKDI +1295751

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTY +401
+F+ L HP T K L+K + + + F YL LK FG + G SVA +AY LA+ L HKNIIFIGQDLAY+ DG SH K+Y H G Y
Cj..5_1333 +1295754 LFITTHLTHPQTIKNLEKNNRNFM-LVHRSSEFTTYLKLKKFGELCEGHSVANVAYGLAVFLRHKNIIFIGQDLAYSNDGFSHTKDYRNLNKHEGHY--- +1296051

CS..1_0235 +402 NPQEIDYS-LTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
E D+ I YGG +V++S W LF+ LE I + Q TYN TEGGARIEG IEKPFK+ CE LL L K F K++ L KQ EL+LK
Cj..5_1333 +1296054 ---ERDFGHFRTIAYGGVGFVESSFYWSLFRFFLEKRIHEANQLELCNTYNCTEGGARIEGAIEKPFKKTCEALLKNNLNKNFPKIDPLSSHKQNELLLK +1296351

CS..1_0235 +502 AFYKVHKVIKICNILEKECLHIYN-------TLNFLSN-DETN--FKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFN +601
+YK+ K I C +KE L YN LN +SN DE +I+++D K K+E + +L + L T QFELNLARI+VLNPKT ED++
Cj..5_1333 +1296354 CYYKIIKSINHCKNFKKELLKSYNHIQESFSNLNLISNLDEGKEILNYLIQEIDKIKFKLEDRKNMLDLCEILKTLLVQFELNLARIFVLNPKTSEDSYK +1296651

CS..1_0235 +602 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKI +651
K+LLW+KEH+E M+ H +A + L KNII L EL +NL +Y +KI
Cj..5_1333 +1296654 KSLLWVKEHIEFFKMIYTHIEAQEKALIKNIIPLENELTQRNLEKYKRKI +1296801

CSUB8521_0235 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD protein

Score: 1294.00 bits: 562.00 e-value: 0.000000
length: 642 gaps: 17 id: 338 positives: 432 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHN-GGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQNKNR +101
QK LF KN +AL N LKE L K F+++ G D LDIN N GGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQNKN
AX.._06575 +1262459 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNH +1262756

CS..1_0235 +102 QKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +201
Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN D
AX.._06575 +1262759 QHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLD +1263056

CS..1_0235 +202 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +301
AL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+F
AX.._06575 +1263059 ALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEF +1263356

CS..1_0235 +302 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYN +401
DKDI+FV +VHP +YLK + ++ T + F Y+ LK F ++ SVA M+Y L++ L HKNIIFIGQDLAYA++G SHP +Y+ Y
AX.._06575 +1263359 DKDILFVCAGVVHPKAIEYLKGRNRKYLITPRYLY-FPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYE +1263656

CS..1_0235 +402 PQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYK +501
Q + LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YK
AX.._06575 +1263659 SQMYKHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYK +1263956

CS..1_0235 +502 VHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHL +601
V++ IK C IL + I L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWIKEHL
AX.._06575 +1263959 VYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1264256

CS..1_0235 +602 EWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +643
E + ++ H KA + L KNI+ L ++L+ + L ++++++++
AX.._06575 +1264259 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1264382

CSUB8521_0235 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 1278.00 bits: 555.10 e-value: 0.000000
length: 638 gaps: 11 id: 344 positives: 432 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
AX.._06490 +1245638 QKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1245935

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
AX.._06490 +1245938 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1246235

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI
AX.._06490 +1246238 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1246535

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
+FV +VHP T +YLK + I T + F YY+ LK+F Y +G SVA MAY A L HKNIIFIGQDLAYA+DG SH K+Y Q
AX.._06490 +1246538 LFVCAGVVHPKTIEYLK--NKTFIIT-QKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRD +1246835

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
+ YGG ++SE W +F+ L++ I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV++
AX.._06490 +1246838 KGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1247135

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I L E + I ++D FK K+E I +++L + L T QFELNLARIYVLNPKTKEDAFNK++LWIKEHLE +
AX.._06490 +1247138 IKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFME +1247435

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
AX.._06490 +1247438 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1247549

CSUB8521_0235 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 1312.00 bits: 569.77 e-value: 0.000000
length: 649 gaps: 24 id: 350 positives: 443 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
AX.._06565 +1258641 QKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1258938

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
AX.._06565 +1258941 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1259238

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI
AX.._06565 +1259241 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1259538

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTY +401
+FVLKS VHP T KYL+K + + +S F YL L DFGY MG SVA M ++LA+ L+HKNI+ IGQDLAYA+DG SH K+Y H G +
AX.._06565 +1259541 LFVLKSYVHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSHTKDYSNLDKHEGHF--- +1259838

CS..1_0235 +402 NPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKA +501
Q T YG V++S W LF+ E + N+K+ + +TYN TEGGARIEG IEKPF CE LL K L KPF KLE L NKQ E +LKA
AX.._06565 +1259841 --QRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKA +1260138

CS..1_0235 +502 FYKVHKVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTL +601
+YKV++ IK C + + Y N+ L N + N K+II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++
AX.._06565 +1260141 YYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNKSI +1260438

CS..1_0235 +602 LWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +650
LWIKEHLE + ++ +H KA + L KNI+ L ++L+ + L +++++++K
AX.._06565 +1260441 LWIKEHLEFMELVYEHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +1260585

CSUB8521_0235 vs: CjjRM3196_1335 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 2001bp / 667aa PV: Yes
Function: hypothetical protein

Score: 1359.00 bits: 590.04 e-value: 0.000000
length: 647 gaps: 18 id: 351 positives: 436 coverage: 0.53 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY+ + E + N KYLLYPVLYFYGFGNGIL+KALLQ
Cj..6_1335 +1288100 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1288397

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN
Cj..6_1335 +1288400 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGN +1288697

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV TSEFFNND
Cj..6_1335 +1288700 DPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNND +1288997

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
F +FDKD+ FVLKS HP T KYL+K + + +S F YL L DFGY +MG SVA MAY L+L L+HKNIIFIGQDLAYAK+G SHP E+ +G
Cj..6_1335 +1289000 FKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGAL +1289297

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
D + I Y L YGG V T E W LF+ E + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
Cj..6_1335 +1289300 DGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFL +1289597

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV K IK C IL + I L E + IE++D FK K+E + +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
Cj..6_1335 +1289600 LKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSIL +1289897

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +648
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L +++++++
Cj..6_1335 +1289900 WIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE +1290038

CSUB8521_0235 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation data

Score: 716.00 bits: 312.67 e-value: 0.000000
length: 276 gaps: 0 id: 170 positives: 205 coverage: 0.55 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IV
CJS3_1430 +1321557 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIV +1321854

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
CJS3_1430 +1321857 VFEKDIEIIWIMFHILDFSHELQNSRLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQG +1322154

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYV +277
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV
CJS3_1430 +1322157 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1322382

Score: 584.00 bits: 255.73 e-value: 0.000000
length: 363 gaps: 13 id: 179 positives: 233 coverage: 0.55 query coverage 0.54

CS..1_0235 +277 VLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLA +376
L LER + T+EFFNNDFG+FDKDIVFV +VHP +YLK + ++ I F Y+ LK F ++ SVA M+Y L++ L HKNII IGQDLA
CJS3_1430 +1322381 CLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYL-IIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLA +1322678

CS..1_0235 +377 YAKDGSSHPKEYHYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpf +476
YA++G SHP +Y+ Y Q ++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF
CJS3_1430 +1322681 YAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPF +1322978

CS..1_0235 +477 vkleklNQNKQKELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYV +576
KLE L NKQ E +LKA+YKV K IK C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYV
CJS3_1430 +1322981 EKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYV +1323278

CS..1_0235 +577 LNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
LNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CJS3_1430 +1323281 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1323467

CSUB8521_0235 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation data

Score: 706.00 bits: 308.36 e-value: 0.000000
length: 276 gaps: 0 id: 168 positives: 201 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IV
CJS3_1427 +1317740 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIV +1318037

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
CJS3_1427 +1318040 VFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQG +1318337

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYV +277
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV
CJS3_1427 +1318340 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1318565

Score: 598.00 bits: 261.77 e-value: 0.000000
length: 375 gaps: 26 id: 180 positives: 243 coverage: 0.54 query coverage 0.54

CS..1_0235 +277 VLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLA +376
L LER + +E FNNDFG+FDKDIVF++KS+ HP T KYL+K + I +S F YL L FGY MG SVA M ++L + L++KNII IGQDLA
CJS3_1427 +1318564 CLYLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFI-LVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLA +1318861

CS..1_0235 +377 YAKDGSSHPKEY-----HYGKYDTYNPQEID-YSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEEll +476
YAKDG +H + + H G Y+ +++D +S TA YGG V++SE W LF+ E I+N K H +TYN TEGGARIEGTIEKPF CE LL
CJS3_1427 +1318864 YAKDGQTHSQGFIHANLHNGDYE----RDLDRFSTTA--YGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLL +1319161

CS..1_0235 +477 tkklkkpfvkleklNQNKQKELMLKAFYKVHKVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLN +576
K L KPF KLE L NKQ E +LKA+YKV++ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL
CJS3_1427 +1319164 DKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLL +1319461

CS..1_0235 +577 TQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +651
TQFELNLARIYVLNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
CJS3_1427 +1319464 TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1319686

CSUB8521_0235 vs: A0W69_07845 in WP2202 (Campylobacter jejuni strain WP2202, complete genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 1233.00 bits: 535.69 e-value: 0.000000
length: 567 gaps: 15 id: 309 positives: 389 coverage: 0.52 query coverage 0.48

CS..1_0235 +75 PVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL +174
PVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL
A0.._07845 +1463704 PVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDIL +1464001

CS..1_0235 +175 TTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKP +274
N+ + + K IL GN DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKP
A0.._07845 +1464004 GLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKP +1464301

CS..1_0235 +275 DYVLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQD +374
DYV LER + T+EFFN DFG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQD
A0.._07845 +1464304 DYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDR---NLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQD +1464601

CS..1_0235 +375 LAYAKDGSSHPKEYHYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkkl +474
LAYA++G SHP +Y+ Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L
A0.._07845 +1464604 LAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDL +1464901

CS..1_0235 +475 kkpfvkleklNQNKQKELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLA +574
KPF KLE L NKQ E +LKA+YKV K I+ C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLA
A0.._07845 +1464904 NKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLA +1465201

CS..1_0235 +575 RIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +641
RIYVLNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
A0.._07845 +1465204 RIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1465402

CSUB8521_0235 vs: QZ67_01453 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1512bp / 504aa PV: Yes
Function: hypothetical protein

Score: 1061.00 bits: 461.50 e-value: 0.000000
length: 513 gaps: 21 id: 284 positives: 346 coverage: 0.56 query coverage 0.44

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQ
QZ67_01453 +1322613 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1322910

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
QZ67_01453 +1322913 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1323210

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN D
QZ67_01453 +1323213 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHD +1323510

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FD+D++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
QZ67_01453 +1323513 FGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1323810

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQK +501
H G + Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
QZ67_01453 +1323813 HEGHF-----QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1324110

CS..1_0235 +502 ELML-KAFYKVHK +514
E +L A+YKV++
QZ67_01453 +1324113 EFLL*MAYYKVYQ +1324149

CSUB8521_0235 vs: QZ67_01469 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 1296.00 bits: 562.87 e-value: 0.000000
length: 644 gaps: 17 id: 343 positives: 434 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IV
QZ67_01469 +1336541 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIV +1336838

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN S D L G
QZ67_01469 +1336841 VFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQG +1337138

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKH IKPDYV LER + T+EFFN DF +FDKDI
QZ67_01469 +1337141 IEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDI +1337438

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L+HKNIIFIGQDLAYAK+G SHP +Y+ TY +
QZ67_01469 +1337441 CFIIKSVVHPNAINYLTK-KTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAH +1337738

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG VKT W++FK LE I +++ T YN TEGGARI+G IEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
QZ67_01469 +1337741 EPILTK-AYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1338038

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
QZ67_01469 +1338041 QSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1338338

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
QZ67_01469 +1338341 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1338470

CSUB8521_0235 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 1289.00 bits: 559.85 e-value: 0.000000
length: 651 gaps: 27 id: 345 positives: 435 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQ
QZ67_01471 +1340350 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQ +1340647

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L N+ + +Y K +I+S GN
QZ67_01471 +1340650 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGN +1340947

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN D
QZ67_01471 +1340950 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHD +1341247

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY----- +401
FG+FD+D++FV S V+P T KYL+K + + IS F + +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
QZ67_01471 +1341250 FGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFM-LISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDK +1341547

CS..1_0235 +402 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQK +501
H G + Q + YGG V++S W +F+ L+N I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
QZ67_01471 +1341550 HEGHF-----QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQN +1341847

CS..1_0235 +502 ELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNK +601
E +LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L D L + QFELNLARIYVLNPKTKEDAFNK
QZ67_01471 +1341850 EFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNK +1342147

CS..1_0235 +602 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +652
++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
QZ67_01471 +1342150 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1342300

CSUB8521_0235 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 1301.00 bits: 565.02 e-value: 0.000000
length: 648 gaps: 23 id: 347 positives: 435 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
N149_1281 +1278088 QKEFFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1278385

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+N L++L T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN
N149_1281 +1278388 NKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLSTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGN +1278685

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
+DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
N149_1281 +1278688 DPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +1278985

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVFV +VHP T +YLK + I T V F YY+ LK+F Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
N149_1281 +1278988 FGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIIT-QKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1279285

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT I YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
N149_1281 +1279288 -NYESQMYEHILT-IAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1279585

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV + I+ C IL + I L E IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
N149_1281 +1279588 LKAYYKVCQSIEHCRDFSKILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1279885

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N149_1281 +1279888 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1280029

CSUB8521_0235 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factor

Score: 1280.00 bits: 555.96 e-value: 0.000000
length: 638 gaps: 11 id: 346 positives: 431 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
N149_1298 +1294882 QKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1295179

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
N149_1298 +1295182 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1295479

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI
N149_1298 +1295482 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1295779

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
VFV +VHP T +YLK + I T + F YY+ LK+F Y +G SVA MAY A L HKNIIFIGQDLAYA+DG SH K+Y Q
N149_1298 +1295782 VFVCAGVVHPKTIEYLK--NKTFIIT-QKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRD +1296079

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
+ YGG ++SE W +F+ L++ I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV K
N149_1298 +1296082 KGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1296379

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNT---QFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I L E + I ++D FK K+E I +++L + L T QFELNLARIYVLNPKTKEDAFNK++LWIKEHLE +
N149_1298 +1296382 IKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFME +1296679

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
N149_1298 +1296682 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1296793

CSUB8521_0235 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factor

Score: 1293.00 bits: 561.57 e-value: 0.000000
length: 644 gaps: 17 id: 340 positives: 431 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDK+LLYPVLYFYGFGNGIL+KALLQNKN Q IV
N149_1296 +1291073 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1291370

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
N149_1296 +1291373 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1291670

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
N149_1296 +1291673 IEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +1291970

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ Y Q
N149_1296 +1291973 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMY +1292270

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
N149_1296 +1292273 KHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1292570

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
N149_1296 +1292573 KSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1292870

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
N149_1296 +1292873 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1293002

CSUB8521_0235 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 1281.00 bits: 556.40 e-value: 0.000000
length: 638 gaps: 11 id: 344 positives: 433 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN ++L N LKE L + F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
AB.._08255 +1558377 QKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1558674

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
AB.._08255 +1558677 VFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1558974

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDFG+FDKDI
AB.._08255 +1558977 IEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +1559274

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
VFV +VHP T +YLK + I T V F YY+ LK+F Y +G SVA MAY A L HKNIIFIGQDLAYAKDG SH K+Y Q
AB.._08255 +1559277 VFVCAGVVHPKTIEYLK--NKTFIIT-QKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFQRD +1559574

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
+ YGG ++SE W +F+ L++ I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV++
AB.._08255 +1559577 KGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1559874

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I L E + I+++D FK K+E I +++L + PL QFELNLA+IYVLNPKTKEDAFNK++LWIKEHLE +
AB.._08255 +1559877 IKHCRDFSKILSNDFEKIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFME +1560174

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
AB.._08255 +1560177 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1560288

CSUB8521_0235 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1287.00 bits: 558.98 e-value: 0.000000
length: 644 gaps: 17 id: 339 positives: 431 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN ++L N LKE L + F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
AB.._08325 +1571374 QKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1571671

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
AB.._08325 +1571674 VFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +1571971

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
AB.._08325 +1571974 IEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +1572271

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ Y Q
AB.._08325 +1572274 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMY +1572571

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
++ LT YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
AB.._08325 +1572574 EHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1572871

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
AB.._08325 +1572874 KSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1573171

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L +++++++K
AB.._08325 +1573174 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +1573303

CSUB8521_0235 vs: AB430_08340 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 1215.00 bits: 527.93 e-value: 0.000000
length: 567 gaps: 15 id: 309 positives: 394 coverage: 0.52 query coverage 0.48

CS..1_0235 +75 PVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL +174
PVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL
AB.._08340 +1575427 PVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDIL +1575724

CS..1_0235 +175 TTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKP +274
N+ + + K +I+S GN DAL GIE ++YNLP +I+ S+ +LL KRKN S AIIVSTGPSLIKQLPLLK+YANKA+IFCADS+YPILAKH IKP
AB.._08340 +1575727 GLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKP +1576024

CS..1_0235 +275 DYVLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQD +374
DYV LER + T+EFFN DFG+FDKDIVFV +VHP T +YLK + I T V F YY+ LK+F Y +G SVA LA L HKNIIFIGQD
AB.._08340 +1576027 DYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIIT-QKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATHLSHKNIIFIGQD +1576324

CS..1_0235 +375 LAYAKDGSSHPKEYHYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkkl +474
LAYA++G SHP +Y+ Y Q ++ LT I YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L
AB.._08340 +1576327 LAYAENGNSHPDDYQNSA--NYESQMYEHILT-IAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDL +1576624

CS..1_0235 +475 kkpfvkleklNQNKQKELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLA +574
KPF KLE L NKQ E +LKA+YKV++ IK C IL + I L E + I+++D FK K+E I +++L + PL QFELNLA
AB.._08340 +1576627 NKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLA +1576924

CS..1_0235 +575 RIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +641
+IYVLNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
AB.._08340 +1576927 KIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1577125

CSUB8521_0235 vs: VC76_06695 in FB1 (Campylobacter coli strain FB1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1273.00 bits: 552.95 e-value: 0.000000
length: 650 gaps: 34 id: 338 positives: 442 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
Q+ +F++N AL N L++KL K F++L GND LDIN LY N++ ELN L +YNDKYLLYPVLYFYGFGNGIL+KALLQNK Q IV
VC76_06695 +1299960 QQEIFKQNINALVNEILRKKLQKIKNTKFELLLGNDNLDINLRNTKDNTLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGILFKALLQNKHHQHIV +1300257

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
+FE ++E++++ FHLLDFS E+K +II DT ++I Y L T PF FLR+YFL+L YYE+ +DI N+N+ +Y K+A++ GN DAL G
VC76_06695 +1300260 IFENDIEILWIMFHLLDFSCEIKKNKIIIFDTNEINIKDYEMLTLTKPFISFLRIYFLELSSSYYEKMNKDIQKVNKNLMEYFKKAMIGYGNDPLDALQG +1300557

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE +++NLP +++ S+KEL+ KRKN SK AIIVSTGPSLIKQLPLLK+Y NKA+IFCADSAYPILAKH+IKPDYV LER T+EFFN DF DFDKDI
VC76_06695 +1300560 IEQFVHNLPKMLTHSSYKELIKKRKNLSKTAIIVSTGPSLIKQLPLLKKYQNKATIFCADSAYPILAKHNIKPDYVCMLERASLTAEFFNHDFKDFDKDI +1300857

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYH-YGKYDTYNPQE +401
VF+ SL+HP YL+K + +I IS FA ++A D+GY + SVA M+YI+A KL HKNIIFIGQDLAYA++G SHP+EY+ +++ Q+
VC76_06695 +1300860 VFICASLIHPNAITYLEKNNREYI-LISRFLSFALFIACHDYGYFDQSPSVAHMSYIIAAKLCHKNIIFIGQDLAYAENGDSHPQEYQNSSTFESNIYQK +1301157

CS..1_0235 +402 IDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHK +501
I+ +GYGG VKT W+LFK +E +IL+ + TYN TEGGA IEGTIE+ FK C++LL L KPF+KL+K N KQ ELMLK++ K++K
VC76_06695 +1301160 IE----CLGYGGKNSVKTHSIWLLFKQIIEQLILDY-PYINTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIKLKKPNIQKQNELMLKSYAKIYK +1301457

CS..1_0235 +502 VIKICNILEKECLHI-------YNTLNFLSNDET------------NFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNK +601
IK C +K+ L Y TLN+LS +E+ NFK +E ++ ++ E++ PL QFELNLARIYVLNPKT ED+FNK
VC76_06695 +1301460 SIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKEILDILIQIIDNFKTKLENVN--------MVDFYEILGPLLMQFELNLARIYVLNPKTLEDSFNK +1301757

CS..1_0235 +602 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +651
++LWIKEHLE I M+ H +A + L KNII L +EL+ + +Y+Q+IK
VC76_06695 +1301760 SVLWIKEHLEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIK +1301907

CSUB8521_0235 vs: AR446_01560 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1832bp / 610aa PV: No
Function: No annotation data

Score: 1075.00 bits: 467.53 e-value: 0.000000
length: 630 gaps: 72 id: 314 positives: 401 coverage: 0.51 query coverage 0.49

CS..1_0235 +22 LLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSE +121
L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E+I++ FH+LDFS
AR.._01560 +311305 LKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS- +311602

CS..1_0235 +122 ELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKEL +221
NEL Q DIL N+ + + K +I+S GN DAL GIE ++YNLP +I+ S+KEL
AR.._01560 +311005 --------------------NEL-------------------------QSDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKEL +311302

CS..1_0235 +222 LLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQ +321
L KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDYV LER + +E FNNDFG+FDKDIVF++KS+ HP T KYL+K
AR.._01560 +310705 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNN +311002

CS..1_0235 +322 QPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYGKYDTYNPQEID-YSLTAIGYGGTHY +421
+ I +S F YL L FGY MG SVA M ++L + L++KNII IGQDLAYAKDG +H + + H G Y+ +++D +S TA YGG
AR.._01560 +310405 RAFI-LVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYE----RDLDKFSTTA--YGGNGK +310702

CS..1_0235 +422 VKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKVIKICNILEKECL +521
V++SE W LF+ E I+N K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV++ IK C +
AR.._01560 +310105 VQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFI +310402

CS..1_0235 +522 HIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKA +621
+Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKEHLE + ++ H KA
AR.._01560 +309805 KVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKA +310102

CS..1_0235 +622 LKITLEKNIINLAKELENQNLHQYIQKIKK +651
+ L KNI+ L ++L+ + L ++++++++
AR.._01560 +309505 QENALIKNILPLEEKLKERKLDKWMERVRR +309592

CSUB8521_0235 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 1280.00 bits: 555.96 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 431 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
AT.._00898 +459013 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +459310

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+ GN DAL G
AT.._00898 +458713 VFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVFHGNDPLDALQG +459010

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
AT.._00898 +458413 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +458710

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ Y Q
AT.._00898 +458113 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMY +458410

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
++ LT YGG +KT W++FK LE + +++ T YN TEGGARI+GTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
AT.._00898 +457813 EHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +458110

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
AT.._00898 +457513 KSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +457810

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
AT.._00898 +457213 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +457342

CSUB8521_0235 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical protein

Score: 1276.00 bits: 554.24 e-value: 0.000000
length: 638 gaps: 11 id: 344 positives: 432 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN ++L N LKE L + + F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
AT.._00928 +472009 QKELFNKNIESLSNILLKESLKQIQSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +472306

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
AT.._00928 +471709 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +472006

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDFG+FDKDI
AT.._00928 +471409 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKDI +471706

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
VFV +VHP T +YLK + I T V F YY+ LK+F Y +G SVA MAY A L HKNIIFIGQDLAYA+DG SH K+Y Q
AT.._00928 +471109 VFVCAGVVHPKTIEYLK--NKTFIIT-QKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRD +471406

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
+ YGG ++SE W +F+ L++ I ++TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV K
AT.._00928 +470809 KGKFQCLAYGGDGKAESSEVWTMFRFFLQDTI-SRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +471106

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I L E + I ++D FK K+E I +++L + PL QFELNLA+IYVLNPKTKEDAFNK++LWIKEHLE +
AT.._00928 +470509 IKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFME +470806

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
AT.._00928 +470209 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +470320

CSUB8521_0235 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD protein

Score: 1308.00 bits: 568.04 e-value: 0.000000
length: 646 gaps: 23 id: 343 positives: 430 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
YSQ_02175 +444943 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +445240

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN
YSQ_02175 +444643 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGN +444940

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
YSQ_02175 +444343 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHD +444640

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVF+ +VHP +YLK + V F YY+ LKDF Y + SVA M+Y L++ L HKNIIFIGQDLAYA++G SHP +Y+
YSQ_02175 +444043 FGEFDKDIVFICAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA- +444340

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLK +501
Y Q + LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LK
YSQ_02175 +443743 -NYESQMYKHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +444040

CS..1_0235 +502 AFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +601
A+YKV K IK C IL I L E IE++D FK K+E I +++L + PL QFELNLARIYVLNPKTKEDAFNK++LWI
YSQ_02175 +443443 AYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAFNKSILWI +443740

CS..1_0235 +602 KEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +647
KEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
YSQ_02175 +443143 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +443278

CSUB8521_0235 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 1313.00 bits: 570.20 e-value: 0.000000
length: 644 gaps: 17 id: 345 positives: 439 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
YSQ_02185 +448752 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +449049

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + + K +ILS GN DAL G
YSQ_02185 +448452 VFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYSILSHGNDPLDALQG +448749

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER +FT+EFFN DFG+FD+++
YSQ_02185 +448152 IEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDREV +448449

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L+HKNIIFIGQDLAYAK+G SHP +Y+ TY +
YSQ_02185 +447852 CFIIKSVVHPNAINYLTK-KTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAH +448149

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
+ LT YGG VKT W++FK LE I +++ T YN TEGGARI+G IEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
YSQ_02185 +447552 EPILTK-AYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +447849

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLA+IYVLNPKTKEDAFNK++LWIKE
YSQ_02185 +447252 QSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYVLNPKTKEDAFNKSILWIKE +447549

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L +++++++K
YSQ_02185 +446952 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +447081

CSUB8521_0235 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1288.00 bits: 559.41 e-value: 0.000000
length: 648 gaps: 21 id: 345 positives: 434 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
YSQ_02255 +462674 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +462971

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN
YSQ_02255 +462374 NKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGN +462671

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
S D L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNND
YSQ_02255 +462074 DSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNND +462371

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-HYGK +401
FG+FD+D++FV S V+P T KYL+K + I T S F + L +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y K
YSQ_02255 +461774 FGEFDQDVLFVCISWVYPQTIKYLQKNNRAFILT-SRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDK +462071

CS..1_0235 +402 YDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTS-TYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
++ + ++ + YGG V++SE W +F+ L+N I SK S TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
YSQ_02255 +461474 HEGHFRRDKG-KFQCLAYGGNGKVESSEIWTMFRFSLQNTI--SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +461771

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV K IK C IL I L E IE++D FK K+E I +++L + PL QFELNLARIYVLNPKTKEDAFNK++L
YSQ_02255 +461174 LKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAFNKSIL +461471

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
YSQ_02255 +460874 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +461015

CSUB8521_0235 vs: YSS_07230 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 1288.00 bits: 559.41 e-value: 0.000000
length: 644 gaps: 17 id: 338 positives: 432 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
YSS_07230 +1351615 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +1351912

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN DAL G
YSS_07230 +1351915 VFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQG +1352212

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
YSS_07230 +1352215 IEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +1352512

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ Y Q
YSS_07230 +1352515 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMY +1352812

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
++ LT YGG +KT W++FK LE + +++ T YN TEGGARI+GTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV
YSS_07230 +1352815 EHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVC +1353112

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
K I+ C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
YSS_07230 +1353115 KSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1353412

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
YSS_07230 +1353415 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1353544

CSUB8521_0235 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical protein

Score: 925.00 bits: 402.83 e-value: 0.000000
length: 625 gaps: 39 id: 284 positives: 377 coverage: 0.55 query coverage 0.44

CS..1_0235 +6 FEKNTQALQN---TKLKEKLLHFKQ-RNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +105
F KN +AL L++KL K+ R F QG D LDIN I + EK Y + YPVL+FYGFGNGILYK LLQN+ ++I+
YSS_07245 +1357367 FNKNLKALSGFEYNDLRKKLEDLKELREFTFTQGKDNLDINIIKKRN-LKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALKRII +1357664

CS..1_0235 +106 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFN-----FLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQ +205
+FEKELELI+L+ +DFS++L G LIIL DIN L F F R Y L + D+YE Y+EDIL N+ + IK L +GN +
YSS_07245 +1357667 IFEKELELIFLALNFIDFSKDLSLGRLIILHHD--DIN----LPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRGNDPK +1357964

CS..1_0235 +206 DALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgd +305
DA+ GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + +E FNNDF D
YSS_07245 +1357967 DAMQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDFKD +1358264

CS..1_0235 +306 fdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY-----HYG +405
FDKDI+F++ SLVH T YL+K Q+ +I I +PFA L L ++GY+ G SV+ MAY LA L HKNII IGQDLAYAKDG +H + + H G
YSS_07245 +1358267 FDKDIIFLVASLVHKKTISYLEKNQRKYILIIKG-QPFARCLGLDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANLHNG +1358564

CS..1_0235 +406 KYDTYNPQEID-YSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKEL +505
Y+ +++D +S TA YGG V++SE W LF+ EN I SK + TYN T+GGARIE IEKPFK++CE+LL K K F KL+ LN +Q +L
YSS_07245 +1358567 DYE----RDLDRFSTTA--YGGNGKVQSSEIWTLFRQIFENFIAFSK--SKTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKL +1358864

CS..1_0235 +506 MLKAFYKVHKVIKICNILEKECLHIYNTLNFLSN--DETNFKKIIEQLDHFKSkiekil--ilkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWI +605
LK + K+ K + + +KEC + + L+ ++ ++I + +D K K+ L+E++ P + + L +Y+ + K D NK WI
YSS_07245 +1358867 GLKIYQKIKKNMNLSLNFKKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKLFAWI +1359164

CS..1_0235 +606 KEH---LEWIL-MLNDHSKALKITL +630
H +E I+ +L + K LKI +
YSS_07245 +1359167 YAHESLMENIIELLEAQDKRLKIAI +1359239

CSUB8521_0235 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1288.00 bits: 559.41 e-value: 0.000000
length: 647 gaps: 19 id: 350 positives: 435 coverage: 0.54 query coverage 0.55

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY+ + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQ
YSS_07160 +1339264 QKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1339561

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN
YSS_07160 +1339564 NKNHQHIVVFEKDIEIIWIMFHILDFSNELQNARLMVLENDKLQAQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGN +1339861

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNND
YSS_07160 +1339864 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNND +1340161

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+FV S V+P T KYL+K + I T S F + L +GY+ G SVA MAY A L +KNIIFIGQDLAYAKDG SH K+Y
YSS_07160 +1340164 FGEFDKDILFVCISWVYPQTIKYLQKNNRAFILT-SRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDK +1340461

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTS-TYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELML +501
Q + YGG V++S W +F+ L+N I SK S TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +L
YSS_07160 +1340464 HEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTI--SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLL +1340761

CS..1_0235 +502 KAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLW +601
KA+YKV K IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LW
YSS_07160 +1340764 KAYYKVCKSIKHCRDFNKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILW +1341061

CS..1_0235 +602 IKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +648
IKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
YSS_07160 +1341064 IKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1341202

CSUB8521_0235 vs: YSS_07240 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1291.00 bits: 560.71 e-value: 0.000000
length: 648 gaps: 23 id: 341 positives: 428 coverage: 0.53 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
YSS_07240 +1355424 QKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +1355721

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + Y ELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K IL GN
YSS_07240 +1355724 NKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGN +1356021

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN D
YSS_07240 +1356024 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHD +1356321

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDIVF+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
YSS_07240 +1356324 FGEFDKDIVFICAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +1356621

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
YSS_07240 +1356624 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1356921

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
YSS_07240 +1356924 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +1357221

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
YSS_07240 +1357224 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1357365

CSUB8521_0235 vs: YSU_02220 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1958bp / 652aa PV: No
Function: No annotation data

Score: 701.00 bits: 306.20 e-value: 0.000000
length: 276 gaps: 0 id: 167 positives: 202 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
YSU_02220 +454822 QKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +455119

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
YSU_02220 +454522 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +454819

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYV +277
IE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDY
YSU_02220 +454222 IEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYA +454447

Score: 599.00 bits: 262.20 e-value: 0.000000
length: 372 gaps: 26 id: 180 positives: 242 coverage: 0.53 query coverage 0.54

CS..1_0235 +280 LERVDFTSEffnndfgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAK +379
LER + +E FNNDFG+FDKDIVF++KS+ HP T KYL+K + I +S F YL L FGY MG SVA M ++L + L++KNII IGQDLAYAK
YSU_02220 +453992 LERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFI-LVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAK +454289

CS..1_0235 +380 DGSSHPKEY-----HYGKYDTYNPQEID-YSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkk +479
DG +H + + H G Y+ +++D +S TA YGG V++SE W LF+ E I+N K H +TYN TEGGARIEGTIEKPF CE LL K
YSU_02220 +453692 DGQTHSQGFIHANLHNGDYE----RDLDKFSTTA--YGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKD +453989

CS..1_0235 +480 lkkpfvkleklNQNKQKELMLKAFYKVHKVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQF +579
L KPF KLE L NKQ E +LKA+YKV++ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQF
YSU_02220 +453392 LNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQF +453689

CS..1_0235 +580 ELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +651
ELNLARIYVLNPKTKEDAFNK++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L +++++++K
YSU_02220 +453092 ELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +453305

CSUB8521_0235 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1303.00 bits: 565.89 e-value: 0.000000
length: 648 gaps: 23 id: 344 positives: 433 coverage: 0.53 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQ +101
QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQ
YSU_02270 +464967 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQ +465264

CS..1_0235 +102 NKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGN +201
NKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
YSU_02270 +464667 NKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNIILRNGN +464964

CS..1_0235 +202 SSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnnd +301
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSLIKQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFNND
YSU_02270 +464367 DPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNND +464664

CS..1_0235 +302 fgdfdkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKY +401
FG+FDKDI+F+ +VHP +YLK + V F YY+ LKDF Y +G SVA LA L HKNIIFIGQDLAYA++G SHP +Y+
YSU_02270 +464067 FGEFDKDIIFICAGVVHPKAIEYLKGR---NLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA- +464364

CS..1_0235 +402 DTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLEN-IILNS-KQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELM +501
Y Q ++ LT YGG V+T W+LFK EN +I N+ K +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +
YSU_02270 +463767 -NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +464064

CS..1_0235 +502 LKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLL +601
LKA+YKV++ IK C IL + I L E + IE++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++L
YSU_02270 +463467 LKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +463764

CS..1_0235 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +649
WIKEHL+ + ++ H KA + L KNI+ L ++L+ + L ++++++++
YSU_02270 +463167 WIKEHLKFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +463308

CSUB8521_0235 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD protein

Score: 1285.00 bits: 558.12 e-value: 0.000000
length: 638 gaps: 13 id: 345 positives: 433 coverage: 0.54 query coverage 0.54

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
YSU_02210 +451008 QKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +451305

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S GN DAL G
YSU_02210 +450708 VFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQG +451005

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FDKDI
YSU_02210 +450408 IEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDI +450705

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
VFV +VHP +YLK + ++ I F Y+ LK F ++ SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ Y Q
YSU_02210 +450108 VFVCAGVVHPKAIEYLKGRNRKYL-IIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMY +450405

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKV +501
++ LT YGG +KT E W+ FK LE +I+ K H +TYN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV K
YSU_02210 +449808 EHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +450105

CS..1_0235 +502 IKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWIL +601
IK C IL + I N L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LWIKEHLE +
YSU_02210 +449508 IKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFME +449805

CS..1_0235 +602 MLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +639
++ H KA + L KNI+ L ++L+ + L ++++++++
YSU_02210 +449208 LVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +449319

CSUB8521_0235 vs: A6K30_02235 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1766bp / 588aa PV: Yes
Function: PseD protein

Score: 693.00 bits: 302.75 e-value: 0.000000
length: 266 gaps: 8 id: 157 positives: 194 coverage: 0.51 query coverage 0.47

CS..1_0235 +31 QILQGNDPLDINFI-----HNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEE +130
Q++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E+I++ FH+LDFS E
A6.._02235 +453007 QLILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSE +453304

CS..1_0235 +131 LKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKELL +230
L+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN DAL GIE ++YNLP +I+ S+KELL
A6.._02235 +452707 LQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELL +453004

CS..1_0235 +231 LKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSE +296
KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSE
A6.._02235 +452407 SKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSE +452602

Score: 419.00 bits: 184.56 e-value: 0.000000
length: 347 gaps: 30 id: 145 positives: 196 coverage: 0.51 query coverage 0.47

CS..1_0235 +309 VHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEM----GSSVATMAYILALK-LEHKNIIFI--------GQDLAYAKDGSSHPKEY-HYGKYD +408
V+P T KYL+K + HI + RP ++ + F +M M MAY ++ L +KN F+ D Y KD +HP +Y H G +
A6.._02235 +452144 VYPQTIKYLQKNKIEHILYYTS-RPSSFIETISIFAHMAM*VKWAKCCYNMAYEFDIRHLNYKNYSFL*DRI*LMQKMDFPYTKDYKTHPDDYQHEGHFQ +452441

CS..1_0235 +409 TYNPQEIDYSLTAIGYGGTHYVKTSETW-MLFKTQLENIILNSKQHTST-YNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELML +508
+ I + YGG V++S + L+N I SK ST YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +L
A6.._02235 +451844 RDKGEHI----QCLAYGGNGKVESSGILDYVLDLSLQNTI--SKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLL +452141

CS..1_0235 +509 KAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLW +608
KA+YKV K IK C IL + I N L E + I ++D FK K+E I +++L + PL TQFELNLARIYVLNPKTKEDAFNK++LW
A6.._02235 +451544 KAYYKVCKSIKHCRDFNKILSNDFEKIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILW +451841

CS..1_0235 +609 IKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +655
IKEHLE + ++ H KA + L KNI+ L ++L+ + L ++++++++
A6.._02235 +451244 IKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +451382

CSUB8521_0235 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1295.00 bits: 562.43 e-value: 0.000000
length: 644 gaps: 17 id: 339 positives: 432 coverage: 0.52 query coverage 0.53

CS..1_0235 +2 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIV +101
QK LF KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IV
A6.._02165 +440716 QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIV +441013

CS..1_0235 +102 VFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMG +201
VFEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++ED+L N+ + + K +I+S GN DAL G
A6.._02165 +440416 VFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQG +440713

CS..1_0235 +202 IENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdI +301
IE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
A6.._02165 +440116 IEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGI +440413

CS..1_0235 +302 VFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI +401
F++KS+VHP YL K + +S F YL L FGY MG SVA MA L+L L HKNIIFIGQDLAYA++G SHP +Y+ Y Q
A6.._02165 +439816 CFIIKSIVHPNAINYLTK-KTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMY +440113

CS..1_0235 +402 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +501
++ LT YGG +KT W++FK LE + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E +LKA+YKV+
A6.._02165 +439516 EHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +439813

CS..1_0235 +502 KVIKICNILEKECLHIY----NTLNFLSNDETN---FKKIIEQLDHFKSki----ekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKE +601
+ IK C + +Y N+ L N + N ++II+ +D K++I L +++ PL TQFELNLARIYVLNPKTKEDAFNK++LWIKE
A6.._02165 +439216 QSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +439513

CS..1_0235 +602 HLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
HLE + ++ H KA + L KNI+ L ++L+ + L ++ +++++
A6.._02165 +438916 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWTERVRR +439045

CSUB8521_0235 vs: CINS_0156 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1959bp / 653aa PV: Yes
Function: motility accessory factor

Score: 1747.00 bits: 757.41 e-value: 0.000000
length: 640 gaps: 6 id: 396 positives: 486 coverage: 0.61 query coverage 0.62

CS..1_0235 +1 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHN--GGGYTlynnslselneklnlyndkylly-PVLYFYGFGNGILYKALLQNKNR +100
MQ+ LF+KN AL++ +LKEKL F +R FQ+ G+D LDINFI GGGY + + D P+LYFYGFGNGILYK LLQNK
CINS_0156 +141143 MQENLFDKNINALKDKRLKEKLQNFNERKFQVQIGDDSLDINFIKENYGGGYNKIYDDALFDLHEKIKTYDDKYFLYPILYFYGFGNGILYKVLLQNKHH +141440

CS..1_0235 +101 QKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +200
QKIVVFE+ELE I+LSFH +DFSEELK +LII DTS ++IN + +C SPFFNFLRVYFLDLHCDYYE+YQ+DIL N+ MQ++IK+ I GN S+D
CINS_0156 +140843 QKIVVFEQELEFIFLSFHYIDFSEELKTNSLIIFDTSAININDFERICRHSPFFNFLRVYFLDLHCDYYEKYQDDILKINRQMQEHIKKIIYGFGNDSKD +141140

CS..1_0235 +201 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +300
+L+G++N+I+N+P+I+S +FKELL KR N+ + AIIVSTGPSLIKQLPLLKQY+NKA+IFCADSAYPILAK++IKPDYVLSLERVDFTSEFFNNDFG+F
CINS_0156 +140543 SLIGVQNFIHNIPNIVSCITFKELLKKRSNARENAIIVSTGPSLIKQLPLLKQYSNKATIFCADSAYPILAKYNIKPDYVLSLERVDFTSEFFNNDFGEF +140840

CS..1_0235 +301 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYN +400
DKDIVFVLK L HP TFKYL K +Q I IS+ P ++ L DFGY+ GSSVA M Y+LA+ L+H+NII IGQDLAYA DG+SHP+EYHYGKYDTY+
CINS_0156 +140243 DKDIVFVLKYLTHPNTFKYLNK-KQTNITIISEYSPCINFIGLNDFGYIYTGSSVAVMGYMLAMHLKHQNIILIGQDLAYANDGASHPEEYHYGKYDTYD +140540

CS..1_0235 +401 PQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAF +500
P++IDY L YGG VKT+ TW LFK QLE I N KQ +TYNATEGGARIEG IEK FK++CE +L K +K F LEKLN+ +Q EL LKAF
CINS_0156 +139943 PKDIDYNLKTTAYGGKGEVKTTTTWNLFKIQLEEAIFNVKQLCNITTYNATEGGARIEGAIEKSFKELCENILDKNFEKSFKNLEKLNHKRQIELKLKAF +140240

CS..1_0235 +501 YKVHKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILM +600
Y ++++IK C LEKEC+ I+N + FLS DE NF +I++LD FK+KIEK I+ + +N QF+LNLARI+VLNPKTKED+FNKTLLWI+EHLEWI M
CINS_0156 +139643 YNIYEIIKFCQDLEKECINIHNHISFLSSDEQNFTILIKKLDEFKTKIEKNSIIASITTSINIQFDLNLARIFVLNPKTKEDSFNKTLLWIQEHLEWITM +139940

CS..1_0235 +601 LNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKL +640
L +H K L+ TLE + L + L+ +NLH+ IQKIK KL
CINS_0156 +139343 LEEHIKTLRKTLEHSSLFLEENLKQHNLHRQIQKIKSTKL +139460

CSUB8521_0235 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factor

Score: 1361.00 bits: 590.90 e-value: 0.000000
length: 641 gaps: 21 id: 359 positives: 449 coverage: 0.56 query coverage 0.56

CS..1_0235 +5 LFEKNTQALQNTKLKEKLLHF-KQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVF +104
+F KN QAL N LK+KLL+ KQ FQI+QG D LDIN + +Y N+L ELN LN Y +KY LYPVLYFYGFGNGILYKALLQN+N + I+VF
CINS_1188 +1147940 MFAKNIQALLNPHLKQKLLQIQKQNKFQIIQGKDNLDINLLNTQDNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALLQNQNHKHIIVF +1148237

CS..1_0235 +105 EKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGIE +204
E +LELIY F++LDFS+EL+ L+I+DT + Y+ LCS P FNF R YFL+LH +YYE+YQ+D+L N N+ K +I S GNS D L GIE
CINS_1188 +1147640 ENDLELIYAMFQILDFSKELEEARLVIIDTNDLKRRDYDYLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSIFSHGNSPIDVLQGIE +1147937

CS..1_0235 +205 NYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIVF +304
++YN+P +ISN S+KELL KRKN S AIIVSTGPSLIKQLPLLKQY+ KA+IFCADSAYPILAK++IKPDYV LER+D T+EFFNNDFG+FDKDIVF
CINS_1188 +1147340 QFVYNIPSMISNPSYKELLNKRKNLSDTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAEFFNNDFGEFDKDIVF +1147637

CS..1_0235 +305 VLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYG---KYDTYNPQE +404
VLKS+VHP FKYL+K +Q I IS+ F ++ L++ GY G SVA MAY LA L HKNIIFIGQDLAYA++G SHPK+Y+ + DTY +
CINS_1188 +1147040 VLKSVVHPNAFKYLEK-KQTKIVVISENSHFINFIDLQNLGYAYSGPSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDYQNSATFESDTY--EH +1147337

CS..1_0235 +405 IDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHK +504
ID + YGG + VKT W+LFK ++E +I + +TYN TEGGARIEG IEKPFK+ICE LL+K L KPF KL+ LN NKQ EL+LKA+ K+ +
CINS_1188 +1146740 ID----TLAYGGGYMVKTHFIWLLFKNEMEKLI-SRNENCATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQNELLLKAYCKINQ +1147037

CS..1_0235 +505 VIKICNILEKECLHIYNTLNFLSND------ETNFKKIIEQLDHFKSkiekililkeliD---PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLE +604
IK C L+K+ ++LN + ND E +I ++D K K+E + +L + P QFELNLARIYVLNPKTKED+FNK++LWIKEHLE
CINS_1188 +1146440 SIKKCVDLKKDFQKELDSLNKMMNDFLLSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTKEDSFNKSVLWIKEHLE +1146737

CS..1_0235 +605 WILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKK +645
WI ++ H A K+ L KNI L L N+ + ++KI K
CINS_1188 +1146140 WIQLIIAHINAQKLGLIKNIKQLECVLINRGFEKLVEKICK +1146260

CSUB8521_0235 vs: CONCH_0163 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 1911bp / 637aa PV: Yes
Function: motility accessory factor

Score: 1823.00 bits: 790.20 e-value: 0.000000
length: 638 gaps: 9 id: 445 positives: 511 coverage: 0.70 query coverage 0.69

CS..1_0235 +1 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
MQK +F KN +AL N KLKE L K NF+ +QG DPLDINFIHNGGGYTLYNN+L EL+EKL LYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CONCH_0163 +145110 MQKHIFNKNLKALNNIKLKETLKKIKILNFKTIQGKDPLDINFIHNGGGYTLYNNTLNELDEKLKLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +145407

CS..1_0235 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSL---VDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQD +200
VVFEKELE IYLSFH +DFSEELKN +LI+LD+ +DI I L + PFFNFLR+YFLDL C+YYE+YQ+DIL N +Q++IKQ ILS GNSSQD
CONCH_0163 +144810 VVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI---LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQD +145107

CS..1_0235 +201 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdf +300
AL GIEN++YNLPDIISN+SF ELLLKRKN AIIVSTGPSLIKQLPLLKQYAN ASIFCADSAYPILAK++IKPDYVLSLERV TSEFFNNDFG+F
CONCH_0163 +144510 ALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEF +144807

CS..1_0235 +301 dkdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYN +400
+KDIVF+L +VH T +L + + S F YL+LK FG + SVA MAY L L L KNIIFIGQDLAYA DGSSHP+EY+YGKYDTYN
CONCH_0163 +144210 NKDIVFILSNVVHKKTISFLNNYKTVFLQRSSG---FTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYN +144507

CS..1_0235 +401 PQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYK +500
PQEIDYSLT + Y G H+VKT ETW+LFK LE I SK +TYN TEGGARI+ TIEKPFKQ C+ELLT+++KKPF KLEKLN+NKQKELMLK+FYK
CONCH_0163 +143910 PQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAKLEKLNENKQKELMLKSFYK +144207

CS..1_0235 +501 VHKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLN +600
+H+VIK+C+ L KEC+++ N LNFL NDE NF II++LDHFK K EKI L EL++PLNTQFELNLARIYVLNPKTKED FNK LWIKEHLEW+ ++
CONCH_0163 +143610 IHQVIKLCDSLHKECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELII +143907

CS..1_0235 +601 DHSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKL +638
H K L+ +LEKNIINL +ELEN+ L++ I KIK L
CONCH_0163 +143310 GHIKKLQESLEKNIINLERELENRHLQKQITKIKNTLL +143421

CSUB8521_0235 vs: Cla_0168 in RM2100; ATCC BAA-1060D (Campylobacter lari RM2100, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factor

Score: 1441.00 bits: 625.41 e-value: 0.000000
length: 641 gaps: 10 id: 377 positives: 465 coverage: 0.59 query coverage 0.59

CS..1_0235 +1 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNG--GGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQ +100
+ K LF KN +L+N LK KL K F++ G DPLDINFI N LY SL +LNEKLNLYNDKY LYPV YF+GFGNGILYKALLQNKN Q
Cla_0168 +153737 VDKKLFNKNLNSLKNENLKNKLKNLKVNKFRVSIGSDPLDINFISNDKITKSKLYEHSLVQLNEKLNLYNDKYFLYPVFYFFGFGNGILYKALLQNKNHQ +154034

CS..1_0235 +101 KIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDA +200
KIVVFE ELE IYLSFH +DFS+EL + ALIILD ++ + LCS PFF FLRVYFLD+HCDYYE+Y+++IL TN+NMQK+IKQ IL GN S+DA
Cla_0168 +153437 KIVVFECELEFIYLSFHFVDFSKELNDDALIILDIKELNELDFQILCSNDPFFHFLRVYFLDIHCDYYEKYHDEILNTNENMQKHIKQIILLHGNDSKDA +153734

CS..1_0235 +201 LMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfd +300
L+GIEN++YNL D+ISNFS +L+ KR+ + K AIIVSTGPSL KQLPLLKQYAN ASIFCAD +YPILAK IKPDYV SLER++ TSEFFNNDFG FD
Cla_0168 +153137 LIGIENHLYNLYDLISNFSLSKLITKREKACKNAIIVSTGPSLTKQLPLLKQYANHASIFCADGSYPILAKEGIKPDYVFSLERIEKTSEFFNNDFGKFD +153434

CS..1_0235 +301 kdIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGK-YDTYN +400
KDI+F+L S+ HP T KYLK+ + I T + PF +L L GY+ SVA MAY +A+ L+H+NIIFIGQDLAYAKDGSSHPK+YHY DTY
Cla_0168 +152837 KDILFILMSVTHPNTIKYLKQNNRKFIIT-QRLLPFVKFLNLNSNGYISGCPSVANMAYFIAVLLKHENIIFIGQDLAYAKDGSSHPKDYHYSSTCDTYR +153134

CS..1_0235 +401 PQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENII--LNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAF +500
I+ + YGG +KT E W +F+ +LE I + +TYNATEGGARIEGTIEKPFK++CEELL K+ K F KL + + K+ EL+LK+F
Cla_0168 +152537 RTHIN----TLAYGGKEQIKTHEVWNVFRVELEKKITFVRDNFNITTYNATEGGARIEGTIEKPFKELCEELLAKEALKNFAKLNETSKEKKIELLLKSF +152834

CS..1_0235 +501 YKVHKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILM +600
YK+++ KIC L + + N + FL NDE NF KII+++D FK IEKI +++EL PL QFELNLA+IYVL PKT+EDA+NK LLWIKEHLEW ++
Cla_0168 +152237 YKLYQASKICENLILKSSSLINKIHFLINDENNFSKIIQEIDIFKNHIEKIKLIEELTLPLFVQFELNLAKIYVLHPKTQEDAYNKKLLWIKEHLEWFVL +152534

CS..1_0235 +601 LNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKLY +641
+ +H K LK +EK + L +N+++YI+KI+ KLY
Cla_0168 +151937 IENHIKILKEVIEKSFLKFENILVEKNMQKYIHKIQNKKLY +152057

CSUB8521_0235 vs: CSUB8521_0178 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 2259.00 bits: 978.27 e-value: 0.000000
length: 643 gaps: 3 id: 531 positives: 563 coverage: 0.83 query coverage 0.83

CS..1_0235 +1 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
M K +FEKNTQALQNTKLKEKLLHFKQRNFQILQG DPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CS..1_0178 +160065 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +160362

CS..1_0235 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALM +200
VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL TNQNMQKYIKQ IL+KGNSSQDALM
CS..1_0178 +159765 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM +160062

CS..1_0235 +201 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkd +300
GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERV TSEFFNNDFG FDKD
CS..1_0178 +159465 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDFGKFDKD +159762

CS..1_0235 +301 IVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQE +400
I+FVL S++HP T YL+K ++ + + + Y LK F Y+ SVA MAY +A+KL++K+IIFIGQDLAYA DGSSHPKEYHYGKYDTYNPQE
CS..1_0178 +159165 IIFVLTSVIHPNTITYLRKNRRKFM-FVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQE +159462

CS..1_0235 +401 IDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKV +500
IDY L + YGG ++ T+ TW++FKT+LE + +K +TYN TEGGARIEGTIEKPFKQICEELL K+ +K F KLEKLN KQ ELMLK+FYK
CS..1_0178 +158865 IDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKT +159162

CS..1_0235 +501 HKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLND +600
K IKIC LEKEC I NTL FLSNDE NFK IIEQLD FK KI LIL+ +ID LNTQFELNLARIYVLNPK KEDAFNKTLLWIKEHLEWILMLND
CS..1_0178 +158565 RKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLND +158862

CS..1_0235 +601 HSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKLYFKDLE +643
HSKALKITLEKNIINL KELENQNLHQYIQKIKKVKLYFKDLE
CS..1_0178 +158265 HSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDLE +158391

CSUB8521_0235 vs: CSUB8521_1411 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1425bp / 475aa PV: Yes
Function: putative motility accessory factor

Score: 994.00 bits: 432.59 e-value: 0.000000
length: 467 gaps: 11 id: 263 positives: 326 coverage: 0.55 query coverage 0.41

CS..1_0235 +4 ALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVF +103
++ E N A+ + LKE+L Q +QI+QG+D LDIN I +GGGY LY+ L ELN+ LNLYNDKYLLYPVL+FYGFGNGILYKALLQN N + I+VF
CS..1_1411 +1403403 SILENNINAVFDYNLKEQLKKVNQT-YQIVQGDDNLDINII-DGGGYRLYDKPLEELNKTLNLYNDKYLLYPVLFFYGFGNGILYKALLQNPNHKIILVF +1403700

CS..1_0235 +104 EKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYE-RYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGI +203
E ++ +IY F ++DFS+ELK L++++ ++ LCS FNFLR YFL++HCDYY+ +YQE+IL N +Q I+++I S GNS D L GI
CS..1_1411 +1403103 EPDVNIIYTIFKVIDFSKELKENKLLLINPKNLNQYSLKTLCSNNYMFNFLRTYFLEIHCDYYDSKYQEEILKLNSLIQDAIRESIFSHGNSPVDYLQGI +1403400

CS..1_0235 +204 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIV +303
+ +I N+P +I+ S+KELL KRKN S AIIVSTGPSL KQL LLKQY NKASIFCADSAYPILAK +IK DYV SLER DFTSEFFN DFG+FDKDI+
CS..1_1411 +1402803 KHFIQNIPKMIAHSSYKELLNKRKNLSDTAIIVSTGPSLTKQLSLLKQYQNKASIFCADSAYPILAKANIKSDYVFSLERTDFTSEFFNHDFGEFDKDIL +1403100

CS..1_0235 +304 FVLKSLVHPSTFKYL--KKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYH-YGKYDTYNPQ +403
F++KS+VHP T KYL KK S+ F + L FGY MG SVA MAY LA L+HKNI+ IGQDLAY G SHPK+Y+ ++T +
CS..1_1411 +1402503 FIVKSVVHPNTIKYLEKKKFYGGNYTIFSNPSNFIVNVKLNHFGYFGMGHSVAHMAYTLATYLKHKNIVLIGQDLAYNDIGESHPKDYQNSSTFETDTYE +1402800

CS..1_0235 +404 EIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEE +470
ID I YG VKT W+ FK+ LEN+I K + TYN TEGGARI GTIE+PFKQ+CE+
CS..1_1411 +1402203 HID----TIAYGAKGMVKTHCIWLWFKSTLENLIATNK-FSITYNCTEGGARINGTIEEPFKQVCEK +1402401

CSUB8521_0235 vs: CSUB8523_1511 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1923bp / 641aa PV: Yes
Function: putative motility accessory factor

Score: 1243.00 bits: 540.00 e-value: 0.000000
length: 646 gaps: 26 id: 347 positives: 444 coverage: 0.54 query coverage 0.54

CS..1_0235 +4 ALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVF +103
++ E N A+ + LKE+L Q +QI+QG+D LDIN I +GGGY LY+ L ELN+ LNLYNDKYLLYPVL+FYGFGNGILYKALLQN N + I+VF
CS..3_1511 +1480028 SILENNINAVFDHNLKEQLKKVNQT-YQIVQGDDNLDINII-DGGGYRLYDKPLEELNKTLNLYNDKYLLYPVLFFYGFGNGILYKALLQNLNHKIILVF +1480325

CS..1_0235 +104 EKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYE-RYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGI +203
E ++ +IY F ++DFS+ELK L++LD +IN L FNFLR YFL++HCDYY+ +YQE+IL N +Q IK+ I+S G+ D L GI
CS..3_1511 +1479728 EPDVNIIYTMFKMIDFSKELKENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDDKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGI +1480025

CS..1_0235 +204 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIV +303
+ +I N+P +I+N S+KELL KRKN S+ AIIVSTGPSL KQL LLKQY NKASIFCADSAYPILAK +IKPDYV SLER DFTSEFFN DFG+FDKDI+
CS..3_1511 +1479428 KHFIQNIPKMIANPSYKELLNKRKNLSETAIIVSTGPSLTKQLSLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNHDFGEFDKDIL +1479725

CS..1_0235 +304 FVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYH-YGKYDTYNPQEI +403
FV+KS+ HP T KYL+K ++ ++ +S F Y +L DFGY MG SVA MA L++ L+H NIIFIGQDLAY G SHPK+Y+ ++T + I
CS..3_1511 +1479128 FVIKSVTHPNTIKYLEKNKRKYM-IVSTPEYFFKYCSLNDFGYFNMGWSVAHMACYLSVHLKHSNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHI +1479425

CS..1_0235 +404 DYSLTAIGYGGTHYVKTSETWMLFKTQLENIILN-SKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHK +503
D +GYGG YVKT +TW+ FK LEN IL K YN TEGGARI GTIE+PFKQ+CE+LL K L KPF+KLE LN NKQ EL+LKA++K+ K
CS..3_1511 +1478828 D----VLGYGGIGYVKTHKTWIFFKKILENDILTFNKMNIKIYNCTEGGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIK +1479125

CS..1_0235 +504 VIK--------IC--NI-LEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEH +603
I+ +C NI + K LHI N + N F+ I++Q+D K+ I L PL QFELNLARIYVLNPKT+ED++NK++LWIKEH
CS..3_1511 +1478528 SIRQYENLKKELCERNISINKNLLHIDNL--DIQNSIHMFEFILKQIDAIKT---SIYRCGLLNGPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEH +1478825

CS..1_0235 +604 LEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKL +649
L+WI ++ H + K L++ ++ EL + ++KI++ L
CS..3_1511 +1478228 LDWIKLIIAHIDSQKEVLQRSVVTTKDELIEKGFLNLVEKIEQRTL +1478363

CSUB8521_0235 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 2259.00 bits: 978.27 e-value: 0.000000
length: 643 gaps: 3 id: 533 positives: 564 coverage: 0.83 query coverage 0.83

CS..1_0235 +1 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
M K +FEKN QALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CS..3_0172 +155453 MNKNIFEKNIQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +155750

CS..1_0235 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALM +200
VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL TNQNMQKYIKQ IL+KGNSSQDALM
CS..3_0172 +155153 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM +155450

CS..1_0235 +201 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkd +300
GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERV TSEFFNNDFGDFDKD
CS..3_0172 +154853 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDFGDFDKD +155150

CS..1_0235 +301 IVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQE +400
IVFVL S++HP T YL+K ++ + + + Y LK F Y+ SVA MAY +A+KL++K+IIFIGQDLAYA DGSSHPKEYHYGKYDTYNPQE
CS..3_0172 +154553 IVFVLTSVIHPNTITYLRKNRRKFM-FVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQE +154850

CS..1_0235 +401 IDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKV +500
IDY L + YGG ++ T+ TW++FKT+LE + +K +TYN TEGGARIEGTIEKPFKQICEELL K+ +K F KLEKLN KQ ELMLK+FYK
CS..3_0172 +154253 IDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKT +154550

CS..1_0235 +501 HKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLND +600
K IKIC LEKEC I NTL FLSNDE NFK IIEQLD FK KI LIL+ +ID LNTQFELNLARIYVLNPK KEDAFNKTLLWIKEHLEWILMLND
CS..3_0172 +153953 RKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLND +154250

CS..1_0235 +601 HSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKLYFKDLE +643
HSKALKITLEKNIINL KELENQNLHQYIQKIKKVKLYFKDLE
CS..3_0172 +153653 HSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDLE +153779

CSUB8521_0235 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factor

Score: 2155.00 bits: 933.41 e-value: 0.000000
length: 642 gaps: 3 id: 509 positives: 557 coverage: 0.79 query coverage 0.79

CS..1_0235 +1 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
MQKALFEKN QALQN KLKEKL FK+ NF+++ GND LDINFIHNGGGY LY + L +LNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CVOL_0220 +187968 MQKALFEKNIQALQNVKLKEKLQNFKKNNFKVIVGNDALDINFIHNGGGYRLYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +188265

CS..1_0235 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALM +200
VVFEKELE IYLSFH +DFSEELKNGALI+LDT +++IN YNE+CS SPFFNFLRVYFLD+HCDYYE+YQEDIL TN NMQ +IK++I GN SQD+LM
CVOL_0220 +187668 VVFEKELEFIYLSFHYIDFSEELKNGALIVLDTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLHIKRSIYRYGNDSQDSLM +187965

CS..1_0235 +201 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkd +300
GIEN+IYNLP IISN+SFK+L LKRK S AIIVSTGPSLIKQLPLLKQY N ASIFCADSAYPILAK IKPDYVLSLERV TSEFFNNDF + DKD
CVOL_0220 +187368 GIENFIYNLPKIISNYSFKQLCLKRKKLSDMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERVKETSEFFNNDFKELDKD +187665

CS..1_0235 +301 IVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQE +400
++FVLKSL HP TF+YL + I + F +++ L DFGYM MG SVATMAY LAL LEHKNIIFIGQDLAYAKDGSSHPKEY+YG+YDTY+P++
CVOL_0220 +187068 VLFVLKSLTHPNTFQYLNANNRKIIPA-TYYTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGSSHPKEYYYGQYDTYDPKD +187365

CS..1_0235 +401 IDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKV +500
I Y LT I YGG V T E WMLFKTQ+E + N+K + T+TYN TEGGARI+GTIEKPFKQICE+LLTKKL KPFVKLEKLNQNKQKELMLKAFYKV
CVOL_0220 +186768 ISYHLTTIAYGGQDKVFTNEIWMLFKTQIEEAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKLEKLNQNKQKELMLKAFYKV +187065

CS..1_0235 +501 HKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLND +600
+K IKICN LEKECLH+YNTL FLSNDE NFK +IEQLD+FKSKIEKILILKELI+PLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILML D
CVOL_0220 +186468 YKAIKICNTLEKECLHLYNTLIFLSNDEKNFKNVIEQLDYFKSKIEKILILKELINPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLKD +186765

CS..1_0235 +601 HSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKLYFKDL +642
H KALKITLEKNIINL KELENQNLHQY+QKIKKVKLYFKDL
CVOL_0220 +186168 HIKALKITLEKNIINLEKELENQNLHQYVQKIKKVKLYFKDL +186291

CSUB8521_0235 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factor

Score: 1184.00 bits: 514.55 e-value: 0.000000
length: 627 gaps: 17 id: 325 positives: 414 coverage: 0.51 query coverage 0.51

CS..1_0235 +5 LFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFE +104
+ +KN +++ T L + L + ++I+QGND LDIN + +Y N L ELN L +YN+KY LYPVLYFYGFGNGILYKALLQNK + I+VFE
CVOL_1306 +1273377 MLQKNIASIK-TGLNQTLSSISHSKYKIIQGNDNLDINLLNTQDNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIVFE +1273674

CS..1_0235 +105 KELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGIEN +204
K+LE+I+ F ++DFS+EL+ L+I DT ++I Y +C P NF R YFL+LH +YYERY++DIL N NM +Y+K+A+L GN DAL GIE
CVOL_1306 +1273677 KDLEIIHTMFSIIDFSKELQEFRLVIADTNCLNILDYEIMCRQQPMLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGIEQ +1273974

CS..1_0235 +205 YIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIVFV +304
+ +NLP +IS ++KELL KRKNS AIIVSTGPSL KQL LLK+YANKA+IFCADSAYPILAK++IKPDYVLSLERV TSEFFNNDFGDFDKDI+F+
CVOL_1306 +1273977 FTHNLPKMISCPTYKELLRKRKNSNDTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDIIFI +1274274

CS..1_0235 +305 LKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEI--- +404
LKS ++ T KYL+K + ++ S F ++ L ++GY+ G SVA M LA +L HKNII IGQDLAY+ DG SH EY Y D Y +I
CVOL_1306 +1274277 LKSYIYKNTIKYLEKNNRKYMLISSTDAKFIFFTQLHNYGYLATGCSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTYLT-DAYKDNKIYKR +1274574

CS..1_0235 +405 DYS-LTAIGYGGTHYVKTSETWMLFKTQLE-NIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVH +504
DY I YGG V++S W LF+ E +I L T+ YN TEGGARI G IEKPFK+ICE+LL KK +K F LE L NKQ ELMLKA+ K+
CVOL_1306 +1274577 DYGKYECIAYGGEGKVQSSFVWTLFRQTFESDIALFKHYDTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLKAYTKIK +1274874

CS..1_0235 +505 KVIKICNILEKECLHIYNTL-----NFLSNDETNFKKIIEQLDHFKSkiekililk---eliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLE +604
K I C L K L N S + N+ II +D K +IE + E+++PL QFELNLARIYVLNP ++D +NK+LLWIKEH+
CVOL_1306 +1274877 KSIVHCQELTKTFQEYLSNLNENCQNICSQKDLNY--IINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNKSLLWIKEHIS +1275174

CS..1_0235 +605 WILMLNDHSKALKITLEKNIINLAKEL +631
W+ ++ H KA + L NII L + +
CVOL_1306 +1275177 WLELIIAHIKAQEKALNDNIIPLKEAI +1275255

CSUB8521_0235 vs: CVOL_1208 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation data

Score: 766.00 bits: 334.24 e-value: 0.000000
length: 367 gaps: 5 id: 212 positives: 265 coverage: 0.55 query coverage 0.55

CS..1_0235 +4 ALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVF +103
++ E N A+ + LKE+L Q +QI+QGND LDIN I +GGGY LY+ L ELN+ LNLYNDKYLLYP L+FYGFGNGILYKALLQN N + I+VF
CVOL_1208 +1175836 SILENNINAVFDHNLKEQLKKVNQT-YQIIQGNDNLDINII-DGGGYKLYDKPLEELNKTLNLYNDKYLLYPALFFYGFGNGILYKALLQNPNHKIILVF +1176133

CS..1_0235 +104 EKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYE-RYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGI +203
E ++ +IY F ++DFS+ELK L++LD +IN L FNFLR YFL++HCDYY+ +YQE+IL N +Q IK+ I+S G+ D L GI
CVOL_1208 +1175536 EPDVNIIYTMFKVIDFSQELKENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDGKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGI +1175833

CS..1_0235 +204 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEffnndfgdfdkdIV +303
+ +I N+P +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLKQY NKASIFCADSAYPILAK +IKPDYV SLER DFTSEFFNNDFG+FDKDI+
CVOL_1208 +1175236 KHFIQNIPKMIAHPSYKELLNKRKNLSDTAIIVSTGPSLTKQLPLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNNDFGEFDKDIL +1175533

CS..1_0235 +304 FVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVA-TMAYILALKLEHKNI +370
FV+KS+ HP T KYL+K ++ ++ +S F Y +L DFGY MG SVA + +I + K + NI
CVOL_1208 +1174936 FVIKSVTHPNTIKYLEKNKRKYM-IVSTPEYFFKYCSLNDFGYFNMGWSVAHILLFIGSFKTWQYNI +1175134

Score: 466.00 bits: 204.83 e-value: 0.000000
length: 298 gaps: 22 id: 138 positives: 189 coverage: 0.55 query coverage 0.55

CS..1_0235 +351 SVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYH-YGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILN-SKQHTSTYNATEG +450
V ++ L++ L+H NIIFIGQDLAY G SHPK+Y+ ++T + ID +GYGG +VKT +TW+ FK LEN IL K YN TEG
CVOL_1208 +1174803 GVLPISCYLSVHLKHGNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHID----VLGYGGIGHVKTHKTWIFFKKILENDILTFNKMNIKIYNCTEG +1175100

CS..1_0235 +451 GARIEGTIEKPFKQICEElltkklkkpfvkleklNQNKQKELMLKAFYKVHKVIK--------IC--NI-LEKECLHIYNTLNFLSNDETNFKKIIEQLD +550
GARI GTIE+PFKQ+CE+LL K L KPF+KLE LN NKQ EL+LKA++K+ K ++ +C NI + K LHI N + N F+ I++Q+D
CVOL_1208 +1174503 GARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSVRQYENLKKELCERNISINKNLLHIDNL--DIQNSIHIFELILKQID +1174800

CS..1_0235 +551 HFKSkiekililkeliDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKL +648
K+ I + +L PL QFELNLARIYVLNPKT+ED++NK++LWIKEHL+WI ++ H + K L++ I+ EL + ++KI++ L
CVOL_1208 +1174203 EIKTSIYRCGLLN---GPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSIVTTKDELIEKGFLNLVEKIEQRAL +1174494