Strain name: YH501
Filepath: ../polyG/campy.new\735271-1026296924.gb
Species: C. coli
Created: 2018-09-09 12:25:37 (W. Europe Summer Time)
TractNo | Contig | Location | Tract | On length | Gene Group | Offset from gene | Gene | Length | Function | NCTC 11168 | 81-176 | PT14 | 00-0949 | 00-1597 | 00-2425 | 00-2426 | 00-2538 | 00-2544 | 00-6200 | 01-1512 | 269.97 | 4031 | 32488 | 35925B2 | 81116; NCTC 11828 | CG8421 | CJ677CC519 | CJM1cam | F38011 | IA3902 | ICDCCJ07001 | M1 | MTVDSCj20 | NCTC11351 | OD267 | R14 | RM1221 | RM1285 | RM3194 | RM3196 | RM3197 | S3 | WP2202 | YH001 | 15-537360 | BFR-CA-9557 | CVM N29710 | FB1 | HC2-48 | OR12 | RM1875 | RM4661 | RM5611 | YH501 | 13826 | ATCC 33237 | 525.92 | 03-427 | 04/554 | 82-40 | 84-112 | 97/608 | SP3 | cfvi03/293 | pet-3 | ATCC 33236 | ATCC BAA-381 | CCUG 27631 | LMG 9260 | 1485E | 2463D | RM11343 | NCTC 12927 | CCUG 22395 | LMG 11760 | NCTC 11845 | RM2100; ATCC BAA-1060D | RM16701 | RM16712 | Slaughter Beach | LMG 23910 | RM16704 | LMG 24374 | LMG 24377 | RIGS 9880 | LMG 24379 |
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0 | CP015528 | 52479 | G11 | 12 | 0 | 0 | A6K30_00205 | 1266 | restriction endonuclease | Cj0031 | CJJ81176_0068 | A911_00150 | PJ16_00180 | PJ17_00185 | N135_00036 | N564_00030 | N565_00030 | N755_00030 | PJ18_00175 | PJ19_00180 | JJD26997_0043 | BN867_00300 | UC78_0040 | C8J_0034 | CJ8421_00165 | RC25_00010 | CJM1cam_0039 | CJH_00185 | CJSA_0032 | ICDCCJ07001_36 | CJM1_0039 | MTVDSCj20_0039 | ERS445056_00036 | A0W68_00175 | H730_00165 | CJE0031 | CjjRM1285_0039 | AXW77_00175 | CjjRM3196_0040 | CjjRM3197_0040 | CJS3_0031 | A0W69_01050 | QZ67_00037 | N149_0037 | AB430_01470 | G157_00150 | VC76_00185 | AR446_08190 | ATE51_00072 | YSQ_00185 | YSS_00195 | YSU_00200 | A6K30_00205 | CINS_0480 | UPTC4110_1431 | CONCH_1400 | UPTC3659_1667 | Cla_1457 | UPTC16701_1425 | UPTC16712_1445 | CD56_07380 | CPEL_1557 | CSUB8521_1649 | CSUB8523_1744 | CVOL_1446 | |||||||||||||||||||||
1 | CP015528 | 68472 | G10 | 10 | 1 | 0 | A6K30_00265 | 268 | iron-binding protein | Cj0045c | CJJ81176_0083 | A911_00220 | PJ16_00245 | PJ17_00250 | N135_00049 | N564_00043 | N565_00043 | N755_00043 | PJ18_00250 | PJ19_00245 | JJD26997_0060 | BN867_00440 | M635_04615 | UC78_0054 | C8J_0048 | CJ8421_00240 | RC25_00075 | CJM1cam_0054 | CJH_00260 | CJSA_0045 | ICDCCJ07001_49 | CJM1_0054 | MTVDSCj20_0053 | ERS445056_00050 | A0W68_00270 | H730_00240 | CJE0044 | CjjRM1285_0054 | AXW77_00240 | CjjRM3196_0054 | CjjRM3197_0054 | CJS3_0045 | A0W69_01120 | QZ67_00051 | N149_0049 | AB430_01410 | G157_00215 | VC76_00250 | AR446_08250 | ATE51_00096 | YSQ_00270 | YSS_00260 | YSU_00260 | A6K30_00265 | ||||||||||||||||||||||||||||||||
2 | CP015528 | 347161 | G12 | 11 | 76 | 0 | A6K30_01745 | 247 | acylneuraminate cytidylyltransferase | JJD26997_0722 | YSQ_01770 | A6K30_01745 | UPTC4110_0308 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | CP015528 | 404112 | G9 | None | 98 | -51 | 51bp upstream of A6K30_02030 | 755 | autotransporter outer membrane beta-barrel domain-containing protein | BN867_13460 | UC78_1307 | C8J_1278 | CJM1cam_1321 | CJH_06895 | ICDCCJ07001_1296 | CJM1_1321 | MTVDSCj20_1341 | ERS445056_01472 | AXW77_06700 | CjjRM3196_1363 | CjjRM3197_1363 | N149_1324 | AB430_08465 | G157_02025 | VC76_06820 | AR446_01420 | ATE51_00842 | YSQ_02050 | YSS_07370 | YSU_02085 | A6K30_02030 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | CP015528 | 424995 | G9 | 9 | 8 | 0 | A6K30_02125 | 416 | hypothetical protein | Cj1342c | CJJ81176_1341 | A911_03015 A911_06515 | PJ16_03080 PJ16_07450 | PJ17_02995 PJ17_07090 | N135_02225 | N564_02325 | N565_01378 | N755_01375 | PJ18_06890 | PJ19_07445 PJ19_03345 | JJD26997_0407 JJD26997_0368 | BN867_13260 | M635_07445 M635_02400 | UC78_1285 | C8J_1258 | CJ8421_06725 | RC25_06265 | CJM1cam_1299 | CJH_06730 | CJSA_1277 CJSA_0585 | ICDCCJ07001_1274 | CJM1_1299 | MTVDSCj20_1320 | ERS445056_01452 | A0W68_07215 A0W68_02910 | H730_07660 | CJE0720 CJE1531 | CjjRM1285_1338 | AXW77_06605 | CjjRM3196_1342 | CjjRM3197_1342 | CJS3_1436 CJS3_0607 | A0W69_07875 A0W69_03955 | N149_0590 N149_1304 | AB430_08370 AB430_04500 | G157_02115 | VC76_06720 | AR446_01515 | ATE51_00880 ATE51_02354 | YSQ_02145 | YSS_07275 | YSU_02180 | A6K30_02125 | CCON33237_0365 | CINS_0771 CINS_1271 CINS_0859 | CONCH_0811 CONCH_1260 | UPTC3659_0914 | Cla_0797 | CAQ16704_0743 | CSUB8521_1498 CSUB8521_0845 | CSUB8523_1594 CSUB8523_0932 | CVOL_1289 | ||||||||||||||||||||||||
5 | CP015528 | 436748 | G9 | 9 | 17 | 0 | A6K30_02155 | 296 | PseD protein | QZ67_01453 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
6 | CP015528 | 448932 | G12 | None | 18 | -36 | 36bp upstream of A6K30_02220 | 82 | hypothetical protein | M635_02300 | AXW77_06505 | ATE51_00922 | YSS_07175 | A6K30_02220 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
7 | CP015528 | 452935 | G9 | None | 17 | -48 | 48bp upstream of A6K30_02235 | 253 | PseD protein | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8 | CP015528 | 459605 | G9 | 9 | 8 | 0 | A6K30_02275 | 403 | carbonic anhydrase | Cj1305c Cj1310c Cj1306c | CJJ81176_1327 | A911_06345 A911_06340 A911_06370 A911_06365 | PJ16_07300 | PJ17_06905 PJ17_06940 | N135_01395 N135_02215 N135_01399 | N564_01328 N564_02220 N564_02225 | N565_02310 N565_02315 N565_01367 | N755_02375 N755_02365 N755_02370 | PJ18_06725 PJ18_06745 PJ18_06720 | PJ19_07300 | JJD26997_0416 JJD26997_0417 JJD26997_0408 JJD26997_0410 | BN867_12990 BN867_12950 | M635_02240 M635_02215 M635_02220 | UC78_1254 UC78_1259 | C8J_1243 | CJ8421_06495 CJ8421_06525 | RC25_06195 | CJM1cam_1282 | CJH_06630 CJH_06610 | CJSA_1243 CJSA_1244 CJSA_1248 | ICDCCJ07001_1254 ICDCCJ07001_1249 | CJM1_1282 | MTVDSCj20_1305 | ERS445056_01416 ERS445056_01422 ERS445056_01415 | A0W68_07045 A0W68_07055 A0W68_07025 | H730_07465 | CJE1504 | CjjRM1285_1324 CjjRM1285_1318 CjjRM1285_1320 | AXW77_06450 AXW77_06430 | CjjRM3196_1319 CjjRM3196_1324 | CjjRM3197_1324 CjjRM3197_1319 | CJS3_1409 CJS3_1400 | A0W69_07710 A0W69_07730 A0W69_07735 | QZ67_01441 QZ67_01445 QZ67_01439 | N149_1273 N149_1264 | AB430_08195 AB430_08215 | G157_02255 | VC76_06590 VC76_06540 | AR446_01600 AR446_01640 AR446_01635 | ATE51_00944 ATE51_00952 ATE51_00958 ATE51_00954 | YSQ_02335 YSQ_02295 | YSS_07120 YSS_07090 YSS_07075 YSS_07085 | YSU_02370 YSU_02365 YSU_02310 | A6K30_02275 A6K30_02310 | CINS_0772 CINS_0773 | CONCH_1270 | Cla_1317 Cla_1308 Cla_1315 | CD56_06755 | CPEL_1412 | CAQ16704_1315 | CSUB8521_0853 CSUB8521_0852 | CSUB8523_0940 | CVOL_1290 | |||||||||||||||||||||||
9 | CP015528 | 460667 | G11 | 11 | 45 | 0 | A6K30_02280 | 61 | 3-oxoacyl-ACP synthase | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10 | CP015528 | 463202 | G9 | 9 | 29 | 0 | A6K30_02295 | 239 | formyl transferase | CJJ81176_1325 | PJ17_06920 | JJD26997_0414 | C8J_1241 | RC25_06185 | CJM1cam_1280 | ICDCCJ07001_1253 | CJM1_1280 | MTVDSCj20_1304 | ERS445056_01420 | CJE1498 | CjjRM3196_1322 | CjjRM3197_1322 | CJS3_1403 | N149_1269 | G157_02280 | VC76_06560 | AR446_01620 | YSQ_02320 | YSU_02350 | A6K30_02295 | CVOL_1294 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
11 | CP015528 | 466554 | G9 | 9 | 8 | 0 | A6K30_02310 | 64 | carbonic anhydrase | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12 | CP015528 | 473537 | G9 | 10 | 15 | 0 | A6K30_02350 | 435 | aminopeptidase | Cj1295 | CJJ81176_1312 CJJ81176_1313 | A911_06290 | PJ16_07255 | PJ17_06865 | N135_01383 | N564_01313 | N565_02300 | N755_01345 | PJ18_06675 | PJ19_07255 | JJD26997_0427 | BN867_12880 | M635_08875 | UC78_1247 | C8J_1238 | CJ8421_06450 | RC25_06170 | CJM1cam_1277 | CJH_06560 | CJSA_1233 | ICDCCJ07001_1243 | CJM1_1277 | MTVDSCj20_1301 | ERS445056_01406 | A0W68_06980 | H730_07425 | CJE1487 | CjjRM1285_1309 | AXW77_06385 | CjjRM3196_1311 | CjjRM3197_1311 | CJS3_1392 | A0W69_07665 | QZ67_01430 | N149_1256 | AB430_08160 | VC76_06500 | AR446_01680 | ATE51_00974 | YSQ_02385 | YSS_07030 | YSU_02410 | A6K30_02350 | CFT03427_1431 | CFF04554_1483 | CFF8240_1468 | CSG_16050 | CFV97608_1605 | CFTSP3_1495 | CFVI03293_1505 | CR44_07250 | CHL_1692 | CHH_1509 | CIG1485E_0398 | CIG2463D_0403 | CIG11343_0347 | CINS_1263 | UPTC4110_1286 | CONCH_1253 | UPTC3659_1523 | Cla_1300 | UPTC16701_1283 | UPTC16712_1302 | CD56_06695 | CPEL_1409 | CAQ16704_1312 | CSUB8521_1489 | CSUB8523_1585 | CVOL_1279 CVOL_1280 | |||||||
13 | CP015528 | 547396 | A13 | None | 170 | -26 | 26bp upstream of A6K30_02755 | 515 | filamentous hemagglutinin | 15-537360 [0] | AB430_07445 | FB1 [0] | AR446_02110 | RM4661 [0] | YSU_02825 | A6K30_02755 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14 | CP015528 | 547409 | G13 | None | 170 | -13 | 13bp upstream of A6K30_02755 | 515 | filamentous hemagglutinin | 15-537360 [0] | AB430_07445 | FB1 [0] | AR446_02110 | RM4661 [0] | YSU_02825 | A6K30_02755 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15 | CP015528 | 729911 | G9 | 8 | 169 | 0 | A6K30_03670 | 656 | hypothetical protein | N149_0993 | AB430_06575 | VC76_05155 | AR446_03010 | ATE51_01498 | YSQ_03705 | YSS_05720 | YSU_03750 | A6K30_03670 | CINS_1119 | CONCH_1111 | UPTC3659_1373 | UPTC16701_1131 | CPEL_1266 | CAQ16704_1150 | CSUB8521_1330 | CSUB8523_1431 | CVOL_1130 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
16 | CP015528 | 888196 | A11 | None | 168 | -231 | 231bp upstream of A6K30_04440 | 86 | hypothetical protein | N149_0842 | G157_04435 | A6K30_04440 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
17 | CP015528 | 888207 | G9 | None | 168 | -220 | 220bp upstream of A6K30_04440 | 86 | hypothetical protein | N149_0842 | G157_04435 | A6K30_04440 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
18 | CP015528 | 1133531 | G10 | 11 | 8 | 0 | A6K30_05725 | 215 | hypothetical protein | A911_03015 | PJ16_03080 | PJ17_02995 | PJ19_03345 | M635_07445 | A0W68_02910 | CJE0720 | CJS3_0607 | A0W69_03955 | N149_0590 | ATE51_02354 | YSQ_06210 | A6K30_05725 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
19 | CP015528 | 1303740 | C11 | None | 167 | 4 | 4bp downstream of A6K30_06570 | 402 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | Cj0432c | CJJ81176_0458 | A911_02105 | PJ16_02130 | PJ17_02125 | N135_00480 | N564_00413 | N565_01975 | N755_00462 | PJ18_02130 | PJ19_02395 | JJD26997_1512 | BN867_04040 | M635_06500 | UC78_0416 | C8J_0407 | CJ8421_02165 | RC25_02140 | CJM1cam_0416 | CJH_02185 | CJSA_0404 | ICDCCJ07001_398 | CJM1_0416 | MTVDSCj20_0406 | ERS445056_00429 | A0W68_02095 | H730_02735 | CJE0482 | CjjRM1285_0408 | AXW77_02090 | CjjRM3196_0418 | CjjRM3197_0418 | CJS3_0421 | A0W69_03010 | QZ67_00437 | N149_0430 | AB430_03710 | G157_06485 | VC76_02270 | AR446_05945 | ATE51_03348 | YSQ_07700 | YSS_01955 | YSU_06710 | A6K30_06570 | CCC13826_0566 | CCON33237_1498 | CCV52592_1046 | CFT03427_1322 | CFF04554_1374 | CFF8240_1358 | CSG_14960 | CFV97608_1497 | CFTSP3_1385 | CFVI03293_1397 | CR44_06690 | CHAB381_1595 | CHL_0518 | CHH_1368 | CIG1485E_1368 | CIG2463D_1559 | CIG11343_1315 | CINS_0263 | UPTC4110_0272 | CONCH_0268 | UPTC3659_0286 | Cla_0266 | UPTC16701_0273 | UPTC16712_0275 | CD56_01340 | CPEL_0278 | CAQ16704_0277 | CSUB8521_0285 | CSUB8523_0279 | CUREO_1551 | CVOL_0263 | |
20 | CP015528 | 1483775 | A10 | 9 | 179 | 0 | A6K30_07545 | 159 | cysteine permease | Cj0249 | CJJ81176_0276 | A911_01200 | PJ16_01185 | PJ17_01225 | N135_00157 | N564_00234 | N565_00230 | N755_00285 | PJ18_00795 | PJ19_01185 | JJD26997_0249 | BN867_02240 | M635_05525 | UC78_0236 | C8J_0226 | CJ8421_01230 | RC25_00965 | CJM1cam_0231 | CJH_01250 | CJSA_0226 | ICDCCJ07001_230 | CJM1_0231 | MTVDSCj20_0225 | ERS445056_00240 | A0W68_01205 | H730_01540 | CJE0299 | CjjRM1285_0229 | AXW77_01190 | CjjRM3196_0237 | CjjRM3197_0237 | CJS3_0239 | A0W69_02080 | QZ67_00165 | N149_0241 | AB430_02715 | G157_07480 | VC76_01280 | AR446_06920 | ATE51_03858 | YSQ_08710 | YSS_08440 | YSU_07690 | A6K30_07545 | CCC13826_1699 | CCON33237_1686 | CCV52592_0632 | CFT03427_0157 | CFF04554_0152 | CFF8240_0150 | CSG_1550 | CFV97608_0154 | CFTSP3_0155 | CFVI03293_0152 | CR44_00795 | CHL_1715 | CHH_0157 | CIG1485E_0165 | CIG2463D_0168 | CIG11343_0114 | CINS_0136 | UPTC4110_0148 | CONCH_0144 | UPTC3659_0166 | Cla_0148 | UPTC16701_0156 | UPTC16712_0154 | CD56_00745 | CPEL_0152 | CAQ16704_0147 | CSUB8521_0158 | CSUB8523_0152 | CVOL_0141 |