Gene group 342

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
342CHL_0780autotransporter domain protein71010
CHL_0780
CHL_0782
CHL_0783
CHH_0746
CHH_1466
CHH_0746
CHH_1466
CI..E_1223
CI..D_1314
CI..D_1314

Annotated functions

Function#Occuringscore
autotransporter domain protein72.00
No annotation data30.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CHL_0780
CHL_0782
1
CHL_0783
CHH_0746
CHH_0746
CHH_1466
CHH_1466
2
CI..E_1223
CI..D_1314
CI..D_1314

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CHL_0780
CHL_0782
1
CHL_0783
CHH_0746
CHH_0746
CHH_1466
CHH_1466
2
CI..E_1223
CI..D_1314
CI..D_1314

Neighbour joining tree

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UPGMA tree

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CCUG 27631

CCUG 27631 : CHL_0780 [tract entry] [top]

Function: No annotation data
+0 MKGFKLSLVLASALMTMGGGSLLAADVPMLEAQTAYKNAYDAVEKANKHKTDLEKQIADFRSSAKQVQDLAVKFTNAAKDLTSSGSATITGLNDGTGVLI
+100 QDGGKDIKIKEANKDNAKTLATTVASKIKESFAAIATPGAENKLDIKNVAENAVKIYAMLNTELKKDDNTLLSDKVTGNAPTVANLLNTIYKDATGAEGE
+200 KKAATNENIAALKALQPEIMEALNDFAAKADALNKTFAAEKQDAFTAPTNIITGTATLSKDQAFTAQAQAVKDALKKLAGDNGAKLDAVIGTDLKTAKGT
+300 PIDNTTIGNIKTSGVAGIDVNGVDATKLKNLLADDGITDADIKAYNEFMTALNSLKEQLNKTTAASLVNDIVTKGTPTSNVFKSLQEAGLTNLVDPTLSL
+400 DATSGLPTADTYLKDFAEQIEKPMQQATNEAAVATSSPIGALTVLNHASSINTATRLAKLSGFDANNMALASAIKNMDGIELASGDTSALSSIVKEYTDR
+500 FNYDNSVWANFIGAKGNTNNGNPELYGFSVGYDRSLDNAIVGGYFTYASSKVDTANLENEADNFEFGLYSRIFYGQNEFDLGASYGFGNNDITYSNYNKV
+600 VSALLSGSTDYDSKFINLNASYGYVLKAGDTIFVKPFIGLGYTYSSNDDYTLNKVNFKSVDTNVVYADLGVELRKYLNDGSYVFITPAIEQELSRNSDDT
+700 IASFVGANSAFLTNPADEKEQTYAKLTVGGEYAISKSLSTTLTLGYKGNTDNTLVNGSLGVKYKF

[show detailed alignment]

CCUG 27631 : CHL_0782 [tract entry] [top]

Function: No annotation data
+0 MKGFKLSLVLASALMTMGGGSSLLAVEPTTTELQKSLTEVNDRVKTANEFINGYRTELAKFKAASDNLKALSKDLDKALTGLKSTGGSETLKLNDTQKGA
+100 SLLPNSEKNKAITIVEAKQADAQALAQKVMAKIQTDISNISKGTNVGKSAADIYGLIETKLDGTSANKLTNEAVAGGEEITIGNLLQTIYKGVDAKTDTD
+200 EATKKQLQSAKNQAKAYYEALGEYIKTAADLNTRLTGAAKGAALTNKANISNDADIKAAYDKLTASIAAAGFDVNADKITNLKGTTVAQPGTTIDKNSNL
+300 ATVPAIAAADTLDLVKLETLLTKYNEQNIKATQAEIDKFHAMINDLQALQKVIQVKTTKATFKEEFAKADSGVFKDSVTAKTLNEAGLVDLISDKIDYTT
+400 PTGRDIDAKSIAADIEAQVVKPMQQATNEAAVATSSPIGALTVLNHASSINTATRLAKLSGFDANNMALASAIKNMDGIELASGDTSALSSIVKEYTDRF
+500 NYDNSVWANFIGAKGNTNNGNPELYGFSVGYDRSLDNAIVGGYFTYASSKVDTANLENEADNFEFGLYSRIFYGQNEFDLGASYGFGNNDITYSNYNKVV
+600 SALLSGSTDYDSKFINLNASYGYVLKAGDTIFVKPFIGLGYTYSSNDDYTLNKVNFKSVDTNVVYADLGVELRKYLNDGSYVFITPAIEQELSRNSDDTI
+700 ASFVGANSAFLTNPADEKEQTYAKLTVGGEYAISKSLSTTLTLGYKGNTDNTLVNGSLGVKYKF

[show detailed alignment]

CCUG 27631 : CHL_0783 [tract entry] [top]

Function: No annotation data
+0 MKGFKLSLVLASALMTMGGGSSLLAADIPADEAKTAYNNAMNAVELANEYKIEFAENIANFRSSAKELKDLAAKFAPLANSLAGAYYDLEAKKPKANPEI
+100 TITTDDNNIKIQSADKNKNLGDTQITAVRSGAISKRVLPVFMDLYNKVGTGNNVAESANKIYVMLNTEISNDVLVQGPANGAKVTVYDLMNTVLNSISGK
+200 EGQNKTKIDGDIEKLKTLHPQIKQALDNFAASADALNSTIRDAKEDAFGVDAKIITGTANLQNDEALQEQADIVKAKLEELGGVAGAKLDSKAGIYLTSE
+300 QTVFPKITNTQQDIDMTRADDYDAAKLKDLLADDAITEEQKNAYNELLAALNSMKEQLHEITVTSAVPAVAKANNSSNVVKSLNEAGLGSFVANNLKLTT
+400 DANGQVTDATIAQDIAEQIEKPIREASNSLSNVIGGGFNAPAAALSMANQTNTMTRLAKLSTPYSKDLALASAIKNMDGLEVASGDNSALSSIIKEYTDR
+500 FNYDNSVYANVIGAKGYTDNGDPKLYGFSVGYDRSFDNFLVGSYFTYAKSSLDTSYLESEADNFELGIYSRAYLGDSEVDTTVSFGIGKNDINNYKLVND
+600 YLNGDYDSKFINLAATYGYVVKAQNSLFIKPFIGLNYAYNKNDSFTLSNAVIPGFEIDKIDGSTLSANLGVELRKYLSDGSFMFITPSVEQELSVSRDDL
+700 VSKFRGASTSFTTQADETKDTYAKVIAGGEYAVTKDFSATVSAGFKTNGDDRYVNGSLGLKYKF

[show detailed alignment]

LMG 9260

LMG 9260 : CHH_0746 [tract entry] [top]

Function: autotransporter domain protein
+0 MKGFKLSLVLASALMTIGGGSSLLAAVTPFVAKQAYSRAIEAVDSANHYKTQFATDIANFRSSAKELQNLAVEFTNLANGLEYDGLQTITIDPNSKEGTL
+100 INDGTNDIKINTDKQDAAKDLAIKVAKDIKTLFSKIAEKDQDKLDIKNVAENATKIYATLNTELKKDDTDLLDKASNATITVSDLINTIYTGVTGNGGTK
+200 DKAEANIEALKTLQPKIMQALNDFVKRADELKMTIEGARQEAFDSDPKIITGTEIEDDEALKKQADIVTQKLQELGGAGGANLDGGDDLANAKGAEITNA
+300 TIGNIKTSGIDIDPANYDAVKLKKLLADDAISDDDKKAYNELLAALNSMKEQLNKITVTSSFSDVVKASNSNVVKSLNEAGLGSFVANNLNLVTTDRRGQ
+400 VTDATMAQDIAEQIEKPINEASKSLSNVIGGGLNAPATALSMANQTNTMTRLAKLSSPYSKDLALASAIKNMEGLELASGDNSALSSIIKEYTKRFDYDN
+500 SLWANVIGAKGYTDNGDPKLYGFSVGYDRSFDNFLLGSYFTYAKSDLDTSYLESEADNFELGIYSRAYLGDSELDTTLSFGIGKNDINNYKLVNEYLNGD
+600 YDSKFINIAATYGYVVKAQNNFFIKPFIGLNYAYNKNDSFTLSNATIQGYEVGKIDGSTLSANLGVEFRQYLSDGSFMFVAPSVEQELSVSRDDLVSKFR
+700 GASTSFTTKADESKDTYAKVIAGGEYAVTRDLSTTISVGFKTNGDDKYVNGSLGVKYKF

[show detailed alignment]

LMG 9260 : CHH_0746 [tract entry] [top]

Function: autotransporter domain protein
+0 MKGFKLSLVLASALMTIGGGSSLLAAVTPFVAKQAYSRAIEAVDSANHYKTQFATDIANFRSSAKELQNLAVEFTNLANGLEYDGLQTITIDPNSKEGTL
+100 INDGTNDIKINTDKQDAAKDLAIKVAKDIKTLFSKIAEKDQDKLDIKNVAENATKIYATLNTELKKDDTDLLDKASNATITVSDLINTIYTGVTGNGGTK
+200 DKAEANIEALKTLQPKIMQALNDFVKRADELKMTIEGARQEAFDSDPKIITGTEIEDDEALKKQADIVTQKLQELGGAGGANLDGGDDLANAKGAEITNA
+300 TIGNIKTSGIDIDPANYDAVKLKKLLADDAISDDDKKAYNELLAALNSMKEQLNKITVTSSFSDVVKASNSNVVKSLNEAGLGSFVANNLNLVTTDRRGQ
+400 VTDATMAQDIAEQIEKPINEASKSLSNVIGGGLNAPATALSMANQTNTMTRLAKLSSPYSKDLALASAIKNMEGLELASGDNSALSSIIKEYTKRFDYDN
+500 SLWANVIGAKGYTDNGDPKLYGFSVGYDRSFDNFLLGSYFTYAKSDLDTSYLESEADNFELGIYSRAYLGDSELDTTLSFGIGKNDINNYKLVNEYLNGD
+600 YDSKFINIAATYGYVVKAQNNFFIKPFIGLNYAYNKNDSFTLSNATIQGYEVGKIDGSTLSANLGVEFRQYLSDGSFMFVAPSVEQELSVSRDDLVSKFR
+700 GASTSFTTKADESKDTYAKVIAGGEYAVTRDLSTTISVGFKTNGDDKYVNGSLGVKYKF

[show detailed alignment]

LMG 9260 : CHH_1466 [tract entry] [top]

Function: autotransporter domain protein
+0 MKGFKLSLVLASALMTIGGGSSLLAVDIPKDEAQKAYGKAIKAVDQANQYKTRFATDIANFRSSAKQLQNLAVEFTNIAKDLESSGSKTIKINDASKSGV
+100 LIKDGENEIKIKSDKQDDAKDLAIKVAKDIKTLFSKIAEKDQDKLDIKNVAENATKIYATLNTELKKDDTDLLDKASNATITVSDLINTIYTGVTGNGGT
+200 KDKAEANIEALKTLQPKIMQALNDFAAKADALNETVKDAKNDAFTKAVKIITDTQNLKDNEDLKKQATAATETLKKLGGVNGANLDAVTGTNLKEETGTE
+300 ITSGTIDGLVASGVTGIYVNGVDAVRLKKLLADDAITEEQKKEYANLLAALNSLKEQLNKITVTSSFSDVAKTSKSDVVKSLNEAGLGSLVANNLNLTPD
+400 SKGQVTDATIAKDIAEQIEKPINEAGKSLSNVLGGSNNAPTTALSMANQTNTMTRFAKLSSPYSKDLALASAIKNMDGLELASGDNSALSSIIKEYTKRF
+500 DYDNSLWANVIGAKGSTDNGDPKLYGFSVGYDRSFDNFLLGSYFTYAKSKLNASYLDSEADNFELGIYSRAYLGDSELDTTLSFGIGKNDINNYKLVNEY
+600 LNGDYDSKFINLAATYGYVVKTQNNFFIKPFIGLNYAYNKNDSFTLSNATIQGYEVGKIDGSTLSANLGVEFRQYLSDGSFMFVAPSVEQELSVSRDDLV
+700 SKFRGASTSFTTKVDESKDTYAKVIAGGEYAVTRDFSATISAGFKTNGDDKYVNGSLGLKYKF

[show detailed alignment]

LMG 9260 : CHH_1466 [tract entry] [top]

Function: autotransporter domain protein
+0 MKGFKLSLVLASALMTIGGGSSLLAVDIPKDEAQKAYGKAIKAVDQANQYKTRFATDIANFRSSAKQLQNLAVEFTNIAKDLESSGSKTIKINDASKSGV
+100 LIKDGENEIKIKSDKQDDAKDLAIKVAKDIKTLFSKIAEKDQDKLDIKNVAENATKIYATLNTELKKDDTDLLDKASNATITVSDLINTIYTGVTGNGGT
+200 KDKAEANIEALKTLQPKIMQALNDFAAKADALNETVKDAKNDAFTKAVKIITDTQNLKDNEDLKKQATAATETLKKLGGVNGANLDAVTGTNLKEETGTE
+300 ITSGTIDGLVASGVTGIYVNGVDAVRLKKLLADDAITEEQKKEYANLLAALNSLKEQLNKITVTSSFSDVAKTSKSDVVKSLNEAGLGSLVANNLNLTPD
+400 SKGQVTDATIAKDIAEQIEKPINEAGKSLSNVLGGSNNAPTTALSMANQTNTMTRFAKLSSPYSKDLALASAIKNMDGLELASGDNSALSSIIKEYTKRF
+500 DYDNSLWANVIGAKGSTDNGDPKLYGFSVGYDRSFDNFLLGSYFTYAKSKLNASYLDSEADNFELGIYSRAYLGDSELDTTLSFGIGKNDINNYKLVNEY
+600 LNGDYDSKFINLAATYGYVVKTQNNFFIKPFIGLNYAYNKNDSFTLSNATIQGYEVGKIDGSTLSANLGVEFRQYLSDGSFMFVAPSVEQELSVSRDDLV
+700 SKFRGASTSFTTKVDESKDTYAKVIAGGEYAVTRDFSATISAGFKTNGDDKYVNGSLGLKYKF

[show detailed alignment]

1485E

1485E : CIG1485E_1223 [tract entry] [top]

Function: autotransporter domain protein
+0 MQFKHSLVLCSALMTLGGGSSLLAEEPVVPTFEQLQTAAEAAKTAYSNSSSFYNTVRTNFIDLQSSYKDIQNLSKDFTTVSSALTSVTTATITTTLGDGD
+100 FKFNVPGTEAGTTTEITIKDGSKADAVKIAQKAMQDIKGFLNNNGSTAVTSDNLAKVYAVLNTKITDTTDSRIDGNDGTLTVGQLVEAVYGNVALAEDAS
+200 TTNEAATPENLAKAQAAAKDILSALNKFSGAVNNLNSVFTAATKGGEFITDTNGFKDTAKIKELKTAITEQWKKAFSSDGSSDNITKIDNLKGTSGLEVG
+300 TSKTDISSNPDTSINPSITENNAIKKVLALLVQSYPAGAENPALGSLDTTITSAEQIAAFKKLNLLLAELQTELTTMTIKTAVGTKSELANALGDQAYKV
+400 FANKLDVTTFPASVTTAEQKEAYLKAQFAEKIEKPIKEASKSVSNLTSGAMGTTAIINQAAQTNTMTRLAKLSTPYSKDFALASAIKDMNGMQLASGDNS
+500 ALSSVISEYTKRFEQDNSLWANVLGAKGSTDNGDPKLYGFSVGYDRSFDNFILGSYFTYAKSKVDTSYLENESDNFELGIYSRAYFGQSELDTSISFGIA
+600 KNDINNYKLVDEYLNGDYDSKFANIAANYGYVFKMQDGFFIKPFIGLAYSYNKNDSFNLKNDVITQEFDKVDGAVLSANLGVEFRQYLSDGSFMFAAPGI
+700 EQELSVSKDDLVSKFNGASTSFTTKADESKNTYGKIIVGGEYAVSKDFSATLSAGIKANNDDRYVNGSLGLKYKF

[show detailed alignment]

2463D

2463D : CIG2463D_1314 [tract entry] [top]

Function: autotransporter domain protein
+0 MIYLPIFYFLRRKNAIQTFFGAMFSTYDIGGGSSLLAEEPVVPTFEQLQTAAETAKTAYSNSSLFYNTVRTNFIDLQSSYKDIQNLSKDFTTVSSALTST
+100 TTATITTTLGDGDFKFNVPGTEAGTTTEITIKDGSKADAVKIAQKAMQDIKGFLSNDGSTAVTSDNLAKVYAVLNTKITDTTDARIEGNDGTLTVGQLVE
+200 AVYGNVALAEDAITTNEAATPENLAKAQAAAKDILSALNKFSGAVNNLNNAFTAATKGGEFITDTNGFKDTAKIKELKTAITEQWNKAFSSDGSSDNIEK
+300 ITNLKGTSGLEVGTDKADISSNSGDSINPTITENNAIKKVLALLVQSYPAGAENPALGSLDTTITSAEQIAAFKKLNLLLAELQTELTTMTVKTAVGTKS
+400 ELANALGDQAYKVFANKLDVTTFPASVTTAEQKEAYLKAQFAEKIEKPIKEASKSVSNLTSGAMGTTAIINQAAQTNTMTRLAKLSTPYSKDFALASAIK
+500 DMNGMQLASGDNSALSSVISEYTKRFEQDNSLWANVLGAKGSTDNGDPKLYGFSVGYDRSFDNFILGSYFTYAKSKVDTSYLENESDNFELGIYSRAYFG
+600 QSELDTSISFGIAKNDINNYKLVDEYLNGDYDSKFANIAANYGYVFKMQDGFFIKPFIGLAYSYNKNDSFNLKNDVITQEFDKVDGAVLSANLGVEFRQY
+700 LSDGSFMFAAPGIEQELSVSKDDLVSKFNGASTSFTTKADESKNTYGKIIVGGEYAVSKDFSATLSAGIKANNDDRYVNGSLGLKYKF

[show detailed alignment]

2463D : CIG2463D_1314 [tract entry] [top]

Function: autotransporter domain protein
+0 MIYLPIFYFLRRKNAIQTFFGAMFSTYDIGGGSSLLAEEPVVPTFEQLQTAAETAKTAYSNSSLFYNTVRTNFIDLQSSYKDIQNLSKDFTTVSSALTST
+100 TTATITTTLGDGDFKFNVPGTEAGTTTEITIKDGSKADAVKIAQKAMQDIKGFLSNDGSTAVTSDNLAKVYAVLNTKITDTTDARIEGNDGTLTVGQLVE
+200 AVYGNVALAEDAITTNEAATPENLAKAQAAAKDILSALNKFSGAVNNLNNAFTAATKGGEFITDTNGFKDTAKIKELKTAITEQWNKAFSSDGSSDNIEK
+300 ITNLKGTSGLEVGTDKADISSNSGDSINPTITENNAIKKVLALLVQSYPAGAENPALGSLDTTITSAEQIAAFKKLNLLLAELQTELTTMTVKTAVGTKS
+400 ELANALGDQAYKVFANKLDVTTFPASVTTAEQKEAYLKAQFAEKIEKPIKEASKSVSNLTSGAMGTTAIINQAAQTNTMTRLAKLSTPYSKDFALASAIK
+500 DMNGMQLASGDNSALSSVISEYTKRFEQDNSLWANVLGAKGSTDNGDPKLYGFSVGYDRSFDNFILGSYFTYAKSKVDTSYLENESDNFELGIYSRAYFG
+600 QSELDTSISFGIAKNDINNYKLVDEYLNGDYDSKFANIAANYGYVFKMQDGFFIKPFIGLAYSYNKNDSFNLKNDVITQEFDKVDGAVLSANLGVEFRQY
+700 LSDGSFMFAAPGIEQELSVSKDDLVSKFNGASTSFTTKADESKNTYGKIIVGGEYAVSKDFSATLSAGIKANNDDRYVNGSLGLKYKF

[show detailed alignment]