CONCH_0163 vs: Cj1318 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor (function unknown)Score: 1335.00 bits: 579.69 e-value: 0.000000
length: 620 gaps: 27 id: 334 positives: 407 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNG---------GGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFS +129
F+ I GKD LDIN LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
Cj1318 +1246780 FELILGKDNLDINLKDTSIKNNGGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFS +1247077
CONCH_0163 +130 EELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNE +229
EL+N L+VL+ + LQ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K IIL NGN +DALQGIE FVYNLP +I+ S+ E
Cj1318 +1247080 NELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKE +1247377
CONCH_0163 +230 LLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNY +329
LL KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVFI + VVH K I +L
Cj1318 +1247380 LLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGR +1247677
CONCH_0163 +330 KTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY GN V+T WL
Cj1318 +1247680 NLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGNGKVETHSIWL +1247977
CONCH_0163 +430 LFKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNF +529
LFK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K LSN N
Cj1318 +1247980 LFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSNDFNN +1248277
CONCH_0163 +530 LIN-------DEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNI +629
+ N E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI
Cj1318 +1248280 IQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNI +1248577
CONCH_0163 +630 INLERELENRHLQKQITKIK +649
+ LE +L+ R L K + +++
Cj1318 +1248580 LPLEEKLKERKLDKWMERVR +1248637
CONCH_0163 vs: Cj1335 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1948bp / 649aa PV: Yes
Function: motility accessory factor (function unknown)Score: 1334.00 bits: 579.26 e-value: 0.000000
length: 597 gaps: 21 id: 329 positives: 401 coverage: 0.51 query coverage 0.52
CONCH_0163 +47 GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI +146
GGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+VL+ + LQ D
Cj1335 +1263676 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTE +1263973
CONCH_0163 +147 LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIK +246
L S PFF F RIYFL+L YYE++++D+L+LN KL E K IIL NGN +DALQGIE FVYNLP +I+ S+ ELL KRKN +TAIIVSTGPSL K
Cj1335 +1263976 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTK +1264273
CONCH_0163 +247 QLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYLSLKKFGNL +346
QLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVFI + VVH K I +L V Q+ F Y+ LK F
Cj1335 +1264276 QLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVITQKVLAFPYYINLKDFSYA +1264573
CONCH_0163 +347 HSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML--EFFISSSKVNIATYN +446
SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY GN V+T WLLFK E + K+ I TYN
Cj1335 +1264576 AVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYN +1264873
CONCH_0163 +447 CTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIN-------DEKNFSSIIKELD +546
CTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K LSN N + N E + I+++D
Cj1335 +1264876 CTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSNDFNNIQNIYLNLNKKENDLNLAIRKID +1265173
CONCH_0163 +547 HFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +643
FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
Cj1335 +1265176 EFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1265464
CONCH_0163 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factorScore: 1358.00 bits: 589.61 e-value: 0.000000
length: 621 gaps: 30 id: 338 positives: 413 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS
A911_06490 +1263067 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSN +1263364
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L++L+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
A911_06490 +1263367 ELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1263664
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+FI + VVH K I +L +
A911_06490 +1263667 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRN +1263964
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
A911_06490 +1263967 LVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1264264
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
A911_06490 +1264267 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSI +1264564
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
A911_06490 +1264567 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1264864
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
A911_06490 +1264867 ILPLEEKLKERKLDKWMERVR +1264927
CONCH_0163 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1273.00 bits: 552.95 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS EL+N L+
A911_06480 +1259258 FELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLM +1259555
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ ELL K
A911_06480 +1259558 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1259855
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
A911_06480 +1259858 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1260155
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
A911_06480 +1260158 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1260455
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C + I + N
A911_06480 +1260458 KRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSF +1260755
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
A911_06480 +1260758 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1261055
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
A911_06480 +1261058 PLEEKLKERKLDKWMERVR +1261112
CONCH_0163 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD proteinScore: 1368.00 bits: 593.92 e-value: 0.000000
length: 621 gaps: 32 id: 343 positives: 422 coverage: 0.53 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
PJ16_07340 +1354472 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSH +1354769
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N LIVL++N L+ D L PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
PJ16_07340 +1354772 ELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1355069
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVFI + VVH K I +L N
PJ16_07340 +1355072 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN +1355369
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
K + + R F Y+ LK F L+ +PSVA M+YFL++ LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT E W
PJ16_07340 +1355372 RKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEFW +1355669
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+ FKQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
PJ16_07340 +1355672 IFFKQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSI +1355969
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
PJ16_07340 +1355972 YLS-----LNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1356269
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
PJ16_07340 +1356272 ILPLEEKLKERKLDKWMERVR +1356332
CONCH_0163 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1276.00 bits: 554.24 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
PJ16_07410 +1367487 FELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLM +1367784
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
PJ16_07410 +1367787 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1368084
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
PJ16_07410 +1368087 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1368384
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
PJ16_07410 +1368387 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1368684
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
KQ LE I + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C + I + N
PJ16_07410 +1368687 KQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSF +1368984
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
PJ16_07410 +1368987 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1369284
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
PJ16_07410 +1369287 PLEEKLKERKLDKWMERVR +1369341
CONCH_0163 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1332.00 bits: 578.39 e-value: 0.000000
length: 622 gaps: 30 id: 334 positives: 419 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
PJ16_07420 +1371296 FELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1371593
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL++N L+ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
PJ16_07420 +1371596 ELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1371893
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KD++F+ ++ +TI +L NN
PJ16_07420 +1371896 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNN +1372193
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY-YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNET +429
+ R S F + L +G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y K++ + ++ LAY GN V++ E
PJ16_07420 +1372196 RAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFRRDKG-KFQCLAYGGNGKVESSEI +1372493
CONCH_0163 +430 WLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------EC +529
W +F+ L+ IS V TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K +
PJ16_07420 +1372496 WTMFRFSLQNTISKNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQS +1372793
CONCH_0163 +530 IYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEK +629
IYLS L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L K
PJ16_07420 +1372796 IYLS-----LNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIK +1373093
CONCH_0163 +630 NIINLERELENRHLQKQITKIK +651
NI+ LE +L+ R L K + +++
PJ16_07420 +1373096 NILPLEEKLKERKLDKWMERVR +1373159
CONCH_0163 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1346.00 bits: 584.43 e-value: 0.000000
length: 619 gaps: 26 id: 336 positives: 408 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
PJ17_06980 +1346577 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +1346874
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
PJ17_06980 +1346877 ELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1347174
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVF+ + VVH K I +L
PJ17_06980 +1347177 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGKT +1347474
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
+ Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
PJ17_06980 +1347477 FIITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1347774
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFL +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K LSN N +
PJ17_06980 +1347777 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSNDFNNI +1348074
CONCH_0163 +530 IN-------DEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
N E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
PJ17_06980 +1348077 QNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1348374
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + K++
PJ17_06980 +1348377 PLEEKLKERKLDKWMEKVR +1348431
CONCH_0163 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD proteinScore: 1367.00 bits: 593.49 e-value: 0.000000
length: 619 gaps: 28 id: 341 positives: 418 coverage: 0.53 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH ++FS
PJ17_07060 +1363414 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILNFSS +1363711
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
PJ17_07060 +1363714 ELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1364011
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVF+ + VVH K I +L N
PJ17_07060 +1364014 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRN +1364311
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
K + + R F Y+ LK F L+ +PSVA MA +L+L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT E W
PJ17_07060 +1364314 RKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEVW +1364611
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFL +529
+ FKQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K LSN N +
PJ17_07060 +1364614 IFFKQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSNDFNNI +1364911
CONCH_0163 +530 IN-------DEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
N E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
PJ17_07060 +1364914 QNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1365211
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
PJ17_07060 +1365214 PLEEKLKERKLDKWMERVR +1365268
CONCH_0163 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1273.00 bits: 552.95 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS EL+N L+
N135_01421 +1337490 FELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLM +1337787
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ ELL K
N135_01421 +1337790 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1338087
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
N135_01421 +1338090 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1338387
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
N135_01421 +1338390 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1338687
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C + I + N
N135_01421 +1338690 KRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSF +1338987
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
N135_01421 +1338990 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1339287
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
N135_01421 +1339290 PLEEKLKERKLDKWMERVR +1339344
CONCH_0163 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1358.00 bits: 589.61 e-value: 0.000000
length: 621 gaps: 30 id: 338 positives: 413 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS
N135_01423 +1341299 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSN +1341596
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L++L+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
N135_01423 +1341599 ELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1341896
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+FI + VVH K I +L +
N135_01423 +1341899 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRN +1342196
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
N135_01423 +1342199 LVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1342496
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
N135_01423 +1342499 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSI +1342796
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
N135_01423 +1342799 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1343096
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
N135_01423 +1343099 ILPLEEKLKERKLDKWMERVR +1343159
CONCH_0163 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1273.00 bits: 552.95 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS EL+N L+
N564_02285 +1299321 FELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLM +1299618
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ ELL K
N564_02285 +1299621 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1299918
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
N564_02285 +1299921 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1300218
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
N564_02285 +1300221 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1300518
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C + I + N
N564_02285 +1300521 KRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSF +1300818
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
N564_02285 +1300821 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1301118
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
N564_02285 +1301121 PLEEKLKERKLDKWMERVR +1301175
CONCH_0163 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1358.00 bits: 589.61 e-value: 0.000000
length: 621 gaps: 30 id: 338 positives: 413 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS
N564_02295 +1303130 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSN +1303427
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L++L+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
N564_02295 +1303430 ELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1303727
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+FI + VVH K I +L +
N564_02295 +1303730 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRN +1304027
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
N564_02295 +1304030 LVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1304327
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
N564_02295 +1304330 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSI +1304627
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
N564_02295 +1304630 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1304927
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
N564_02295 +1304930 ILPLEEKLKERKLDKWMERVR +1304990
CONCH_0163 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1358.00 bits: 589.61 e-value: 0.000000
length: 621 gaps: 30 id: 338 positives: 413 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS
N565_02385 +1341686 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSN +1341983
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L++L+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
N565_02385 +1341986 ELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1342283
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+FI + VVH K I +L +
N565_02385 +1342286 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRN +1342583
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
N565_02385 +1342586 LVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1342883
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
N565_02385 +1342886 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSI +1343183
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
N565_02385 +1343186 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1343483
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
N565_02385 +1343486 ILPLEEKLKERKLDKWMERVR +1343546
CONCH_0163 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1273.00 bits: 552.95 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS EL+N L+
N565_02375 +1337877 FELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLM +1338174
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ ELL K
N565_02375 +1338177 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1338474
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
N565_02375 +1338477 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1338774
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
N565_02375 +1338777 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1339074
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C + I + N
N565_02375 +1339077 KRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSF +1339374
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
N565_02375 +1339377 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1339674
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
N565_02375 +1339677 PLEEKLKERKLDKWMERVR +1339731
CONCH_0163 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1358.00 bits: 589.61 e-value: 0.000000
length: 621 gaps: 30 id: 338 positives: 413 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS
N755_02445 +1341669 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSN +1341966
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L++L+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
N755_02445 +1341969 ELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1342266
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+FI + VVH K I +L +
N755_02445 +1342269 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRN +1342566
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
N755_02445 +1342569 LVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1342866
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
N755_02445 +1342869 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSI +1343166
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
N755_02445 +1343169 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1343466
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
N755_02445 +1343469 ILPLEEKLKERKLDKWMERVR +1343529
CONCH_0163 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1273.00 bits: 552.95 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS EL+N L+
N755_02435 +1337860 FELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLM +1338157
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ ELL K
N755_02435 +1338160 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1338457
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
N755_02435 +1338460 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1338757
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
N755_02435 +1338760 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1339057
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C + I + N
N755_02435 +1339060 KRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSF +1339357
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
N755_02435 +1339360 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1339657
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
N755_02435 +1339660 PLEEKLKERKLDKWMERVR +1339714
CONCH_0163 vs: PJ18_06860 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1305.00 bits: 566.75 e-value: 0.000000
length: 621 gaps: 30 id: 329 positives: 408 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
PJ18_06860 +1302631 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1302928
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L++L+ + LQ D L PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN S D LQGIE FVYNLP +I+ S+ EL
PJ18_06860 +1302931 ELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +1303228
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DF EF++DIVFI + VVH K I +L
PJ18_06860 +1303231 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDRDIVFICAGVVHPKAIEYLKGRN +1303528
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ G Y+ LK F SVA M +L LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY VKT W+L
PJ18_06860 +1303531 LVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTK-AYGEKEEVKTHAIWIL +1303828
CONCH_0163 +430 FKQMLEFFI--SSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E I + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
PJ18_06860 +1303831 FKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSI +1304128
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
PJ18_06860 +1304131 YLS-----LNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1304428
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
PJ18_06860 +1304431 ILPLEEKLKERKLDKWMERVR +1304491
CONCH_0163 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1276.00 bits: 554.24 e-value: 0.000000
length: 619 gaps: 28 id: 330 positives: 408 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
PJ18_06850 +1298822 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLM +1299119
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
PJ18_06850 +1299122 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1299419
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DF EF+KDI FI+ VVH I +L F
PJ18_06850 +1299422 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNF +1299719
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F YL L FG SVA MA +L+L L KNIIFIGQDLAYA +G SHP++Y TY + + LT AY G VKT WL+F
PJ18_06850 +1299722 TLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEPILTK-AYGGKGEVKTHHVWLMF +1300019
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLN--- +529
KQ LE I + ++ YNCTEGGARI IEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C I + +++
PJ18_06850 +1300022 KQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSF +1300319
CONCH_0163 +530 -FLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
PJ18_06850 +1300322 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1300619
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
PJ18_06850 +1300622 PLEEKLKERKLDKWMERVR +1300676
CONCH_0163 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD proteinScore: 1368.00 bits: 593.92 e-value: 0.000000
length: 621 gaps: 32 id: 343 positives: 422 coverage: 0.53 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
PJ19_07340 +1353083 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSH +1353380
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N LIVL++N L+ D L PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
PJ19_07340 +1353383 ELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1353680
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVFI + VVH K I +L N
PJ19_07340 +1353683 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN +1353980
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
K + + R F Y+ LK F L+ +PSVA M+YFL++ LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT E W
PJ19_07340 +1353983 RKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEFW +1354280
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+ FKQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
PJ19_07340 +1354283 IFFKQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSI +1354580
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
PJ19_07340 +1354583 YLS-----LNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1354880
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
PJ19_07340 +1354883 ILPLEEKLKERKLDKWMERVR +1354943
CONCH_0163 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1332.00 bits: 578.39 e-value: 0.000000
length: 622 gaps: 30 id: 334 positives: 419 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
PJ19_07420 +1369907 FELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1370204
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL++N L+ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
PJ19_07420 +1370207 ELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1370504
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KD++F+ ++ +TI +L NN
PJ19_07420 +1370507 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNN +1370804
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY-YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNET +429
+ R S F + L +G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y K++ + ++ LAY GN V++ E
PJ19_07420 +1370807 RAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFRRDKG-KFQCLAYGGNGKVESSEI +1371104
CONCH_0163 +430 WLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------EC +529
W +F+ L+ IS V TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K +
PJ19_07420 +1371107 WTMFRFSLQNTISKNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQS +1371404
CONCH_0163 +530 IYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEK +629
IYLS L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L K
PJ19_07420 +1371407 IYLS-----LNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIK +1371704
CONCH_0163 +630 NIINLERELENRHLQKQITKIK +651
NI+ LE +L+ R L K + +++
PJ19_07420 +1371707 NILPLEEKLKERKLDKWMERVR +1371770
CONCH_0163 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1276.00 bits: 554.24 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
PJ19_07410 +1366098 FELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLM +1366395
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
PJ19_07410 +1366398 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1366695
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
PJ19_07410 +1366698 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1366995
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +KT WL+F
PJ19_07410 +1366998 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIKTHHVWLMF +1367295
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
KQ LE I + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C + I + N
PJ19_07410 +1367298 KQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSF +1367595
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
PJ19_07410 +1367598 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1367895
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
PJ19_07410 +1367898 PLEEKLKERKLDKWMERVR +1367952
CONCH_0163 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factorScore: 1388.00 bits: 602.55 e-value: 0.000000
length: 621 gaps: 29 id: 339 positives: 415 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY+ LY + + EL L Y DKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
JJ..7_0374 +331740 FELILGKDKLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSN +332037
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L++L+ + LQ D L S PFF F RIYFL+L YYE++++D+LK+N KL E K++IL GN S DALQGIE FVYNLP +I+ S+ EL
JJ..7_0374 +331440 ELQNARLMILENDKLQTQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETFKKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEEL +331737
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A++FCADSAYPILAK I+PDYVLSLERV+ETSEFFNNDF EF+KDI+F+L H T +L NN
JJ..7_0374 +331140 LAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVLETSEFFNNDFKEFDKDILFVLKSYAHPHTTKYLQKNN +331437
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ + + F YL L FG SVA MAY L L L +KNII IGQDLAY+ DGSSHP+E+ +G D + I Y L T AY G V T E W
JJ..7_0374 +330840 RNFMLVSTYANFINYLKLDDFGYFTMGFSVANMAYHLALLLQYKNIILIGQDLAYSKDGSSHPDEHIFGTLDGEKKETISYDLQTTAYGGEGLVYTQEVW +331137
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
LF+ + E I+ I TYNCTEGGARI+ IEKPF C+ LL +++ KPF KLE L KQ E +LK++YK+ Q IK C K + I
JJ..7_0374 +330540 NLFRSIFEQDITN--YHIPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCQSIKHCRDFSKILSNDFENIQSI +330837
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKEDVFNK LWIKEHLE +EL+ GHIK + +L KN
JJ..7_0374 +330240 YLS-----LNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKN +330537
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
JJ..7_0374 +329940 ILPLEEKLKERKLDKGMERVR +330000
CONCH_0163 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factorScore: 1262.00 bits: 548.20 e-value: 0.000000
length: 619 gaps: 28 id: 327 positives: 408 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN L+ N +NEL+ L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
JJ..7_0376 +335543 FELILGKDKLDINLKNTSDNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLM +335840
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++D+L+LN KL ++ K ILS GN DALQGIE FVYNLP +I+ S+ ELL K
JJ..7_0376 +335243 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSILSHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAK +335540
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSLIKQLPLLK+YAN A+IFCADSAYPILAK+NIKPDYV LER T+EFFN DFGEF+KDI FI+ VVH I +LN F
JJ..7_0376 +334943 RKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSEFTAEFFNHDFGEFDKDICFIIKSVVHPNAIHYLNKKTDDF +335240
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F Y+ L FG SVA MA +L+L L KNIIFIGQDLAYA +G SHP++Y TY + + LT AY G VKT WL+F
JJ..7_0376 +334643 TLVSTYASFINYVKLDDFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEPILTK-AYGGKGEVKTHHIWLMF +334940
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLC----DSLHKECIYLSNRL +529
KQ LE + + ++ YNCTEGGARI+ IEKPF C+ LL +++ KPF KLE L KQ E +LK++YK+ + I+ C D K + N
JJ..7_0376 +334343 KQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKSIEHCRDFNDKFIKSYKKIKNSF +334640
CONCH_0163 +530 NFLINDEKNFSSIIKELDHFKNKFEKINFLN-------ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N ++N + K + +I+ L ++L PL TQFELNLARIYVLNPKTKEDVFNK LWIKEHLE +EL+ GHIK + +L KNI+
JJ..7_0376 +334043 MSLQNSQENEILVKKIIKNIDKIKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +334340
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
JJ..7_0376 +333743 PLEEKLKERKLNKWMERVR +333797
CONCH_0163 vs: JJD26997_0396 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1933bp / 644aa PV: Yes
Function: No annotation dataScore: 1343.00 bits: 583.14 e-value: 0.000000
length: 598 gaps: 25 id: 327 positives: 403 coverage: 0.51 query coverage 0.51
CONCH_0163 +47 GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI +146
GGGY+ LY + + EL L Y DKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L++L+ + LQ D
JJ..7_0396 +352318 GGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNE +352615
CONCH_0163 +147 LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIK +246
L S PFF F RIYFL+L YYE++++D+LK+N KL E K++IL GN S DALQGIE FVYNLP +I+ S+ ELL KRK +TAIIVSTGPSL K
JJ..7_0396 +352018 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAENFKKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTK +352315
CONCH_0163 +247 QLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYLSLKKFGNL +346
QLPLLK+YA A++FCADSAYPILAK I+PDYV LER T+EFFN DFGEF++DIVFI + VVH K I +L V Q+ F Y+ LK F
JJ..7_0396 +351718 QLPLLKKYASKATLFCADSAYPILAKQGIRPDYVCMLERTDFTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLKGRNLVITQKVLTFPYYINLKDFSYA +352015
CONCH_0163 +347 HSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSKVNIATYNCT +446
SVA M+YFL++ LN KNII IGQDLAYA +G SHP++Y TY Q + LT AY G VKT E W+ FKQMLE I + I TYNCT
JJ..7_0396 +351418 AVGFSVAHMSYFLSVLLNHKNIILIGQDLAYAKNGNSHPDDYQNSA--TYESQTYEPILTK-AYGGKGEVKTHEVWIFFKQMLETMI--IEYSIPTYNCT +351715
CONCH_0163 +447 EGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKELD +546
EGGARI+ TIEKPF C+ LL +++ KPF KLE L KQ E +LK++YK+ + I+ C K + IYLS L E+ I+++D
JJ..7_0396 +351118 EGGARIEGTIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKSIEHCKDFSKILSNDFENIQSIYLS-----LNEKEEYLNLAIRKID +351415
CONCH_0163 +547 HFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIKN +644
FKNK E I + E+L PL TQFELNLARIYVLNPKTKEDVFNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
JJ..7_0396 +350818 EFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR +351109
CONCH_0163 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factorScore: 1295.00 bits: 562.43 e-value: 0.000000
length: 627 gaps: 33 id: 333 positives: 414 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
BN.._13180 +1296085 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +1296382
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNY +229
EL+ L+VL++ SL DI+ FFSN PFF F RIYFL+L YYE+++KDIL LN KL E K I+S GN DALQGIE FVYNLP +I+
BN.._13180 +1296385 ELQSARLMVLETSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHP +1296682
CONCH_0163 +230 SFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISF +329
S+ ELL KRK+ +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDI+F+L VH T +
BN.._13180 +1296685 SYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVLKSYVHPHTTKY +1296982
CONCH_0163 +330 L--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVK +429
L NN + + + F YL L FG SVA M + L + L KNI+ IGQDLAY DG SH ++Y Q TT AY GN V+
BN.._13180 +1296985 LQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSHTKDYSNLDKHEGHFQRDKNKYTTQAYGGNGKVQ +1297282
CONCH_0163 +430 TNETWLLFKQMLEFFISSSKVN--IATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYL +529
+ E W LF++ E I K+N I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C I +
BN.._13180 +1297285 SSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKV +1297582
CONCH_0163 +530 SNRLN----FLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQ +629
N++ L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK +
BN.._13180 +1297585 YNKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE +1297882
CONCH_0163 +630 ESLEKNIINLERELENRHLQKQITKIK +656
+L KNI+ LE +++ R L K + +++
BN.._13180 +1297885 NALIKNILPLEEKIKERKLDKWMERVR +1297963
CONCH_0163 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factorScore: 1353.00 bits: 587.45 e-value: 0.000000
length: 624 gaps: 36 id: 341 positives: 417 coverage: 0.53 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
BN.._13200 +1299927 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +1300224
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNY +229
EL+ L+VL++ SL DI+ FFSN PFF F RIYFL+L YYE+++KDIL LN KL E K I+S GN DALQGIE FVYNLP +I+
BN.._13200 +1300227 ELQSARLMVLETSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHP +1300524
CONCH_0163 +230 SFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISF +329
S+ ELL KRK+ +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+F+ + VVH K I +
BN.._13200 +1300527 SYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFVCAGVVHPKAIEY +1300824
CONCH_0163 +330 LNNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTN +429
L V Q+ F Y+ LK F SVA +L LN KNIIFIGQDLAYA++G SHP++Y TY Q ++ LTT AY GN V+T
BN.._13200 +1300827 LKGRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--TYESQMYEHILTT-AYGGNGKVETH +1301124
CONCH_0163 +430 ETWLLFKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSN +529
WLLFK E + K++I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K LSN
BN.._13200 +1301127 SIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSN +1301424
CONCH_0163 +530 RLNFLIN-------DEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESL +629
N + N E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L
BN.._13200 +1301427 DFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENAL +1301724
CONCH_0163 +630 EKNIINLERELENRHLQKQITKIK +653
KNI+ LE +++ R L K + +++
BN.._13200 +1301727 IKNILPLEEKIKERKLDKWMERVR +1301796
CONCH_0163 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD proteinScore: 1344.00 bits: 583.57 e-value: 0.000000
length: 599 gaps: 27 id: 331 positives: 412 coverage: 0.56 query coverage 0.52
CONCH_0163 +47 GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI +146
GGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL++N L+ D
M635_02285 +431889 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNE +432186
CONCH_0163 +147 LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIK +246
L S PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL KRK +TAIIVSTGPSL K
M635_02285 +432189 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTK +432486
CONCH_0163 +247 QLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKKFG +346
QLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KD++F+ + VVH K I +L N K + R F Y+ LK F
M635_02285 +432489 QLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFD +432786
CONCH_0163 +347 NLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSKVNIATYN +446
L+ +PSVA M+YFL++ LN KNIIFIGQDLAYA++G SHP++ Y Y Q ++ LT AY G +KT E W+ FKQ+LE I K I TYN
M635_02285 +432789 FLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDD--YQNSANYENQMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMI--IKYHITTYN +433086
CONCH_0163 +447 CTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKE +546
CTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + IYLS L E+ I++
M635_02285 +433089 CTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLS-----LNEKEEYLNLAIEK +433386
CONCH_0163 +547 LDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +645
+D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
M635_02285 +433389 IDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +433683
CONCH_0163 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD proteinScore: 1322.00 bits: 574.08 e-value: 0.000000
length: 614 gaps: 24 id: 334 positives: 410 coverage: 0.52 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
M635_02370 +448657 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSSELQSARLM +448954
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L++ SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
M635_02370 +448957 ILNTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +449254
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+NIKPDYVLSLER+ TSEFFNNDFGEF+KDIVF+ + VVH KTI +L N +
M635_02370 +449257 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFII +449554
CONCH_0163 +330 LQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
Q+ F Y+ LK F SVA MAY LN+KNIIFIGQDLAYA+DG SH ++Y Q LAY GN ++ E W +F+
M635_02370 +449557 TQKILAFPYYINLKNFCYAAIGFSVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKAESSEVWTMFRF +449854
CONCH_0163 +430 MLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIN--- +529
L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K LSN N + N
M635_02370 +449857 FLQDTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSNDFNNIQNIYL +450154
CONCH_0163 +530 ----DEKNFSSIIKELDHFKNKFEKINFLNELLNPLNT---QFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERE +629
E + I+++D FKNK E I + +L L T QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +
M635_02370 +450157 NLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEK +450454
CONCH_0163 +630 LENRHLQKQITKIK +643
L+ R L K + +++
M635_02370 +450457 LKERKLDKWMERVR +450496
CONCH_0163 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical proteinScore: 1330.00 bits: 577.53 e-value: 0.000000
length: 626 gaps: 38 id: 339 positives: 421 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
UC78_1278 +1249246 FELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +1249543
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNY +229
EL+ L+VL++ SL DI+ FFSN PFF F RIYFL+L NYYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+
UC78_1278 +1249546 ELQSARLMVLETSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNIILRNGNDPLDALQGIEQFVYNLPQMITHP +1249843
CONCH_0163 +230 SFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISF +329
S+ ELL KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK++IKPDYVLSLER+ TSEFFNNDFGEF+K+++F+ V+ +TI +
UC78_1278 +1249846 SYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKNVLFVCVSWVYPQTIKY +1250143
CONCH_0163 +330 L--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVK +429
L NN + + R S F + + ++G + PSVA MAY + L KNIIFIGQDLAYA DG SH ++Y Q LAY GN V+
UC78_1278 +1250146 LQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVE +1250443
CONCH_0163 +430 TNETWLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK------- +529
+ W +F+ L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K
UC78_1278 +1250446 SSGIWTMFRFSLQNTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFE +1250743
CONCH_0163 +530 --ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQE +629
+ IYLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKEDVFNKN LWIKEHLE +EL+ GHIK +
UC78_1278 +1250746 NIQSIYLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKNILWIKEHLEFMELVYGHIKAQEN +1251043
CONCH_0163 +630 SLEKNIINLERELENRHLQKQITKIK +655
+L KNI+ LE +L+ R L K + +++
UC78_1278 +1251046 ALIKNILPLEEKLKERKLDKWMERVR +1251121
CONCH_0163 vs: UC78_1267 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical proteinScore: 1325.00 bits: 575.38 e-value: 0.000000
length: 628 gaps: 42 id: 341 positives: 421 coverage: 0.52 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
UC78_1267 +1235049 FELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +1235346
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNY +229
EL+ L+VL++ SL DI+ FFSN PFF F RIYFL+L NYYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+
UC78_1267 +1235349 ELQSARLMVLETSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNIILRNGNDPLDALQGIEQFVYNLPQMITHP +1235646
CONCH_0163 +230 SFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISF +329
S+ ELL KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK++IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +
UC78_1267 +1235649 SYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVCMLERKAITAEFFNHDFGEFDNGICFIIKSIVHPNAINY +1235946
CONCH_0163 +330 LNNYKTVFLQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVK +429
L F S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y +Y + + L TLAY G +K
UC78_1267 +1235949 LTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH-LYTLAYGGKEKIK +1236246
CONCH_0163 +430 TNETWLLFKQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK----- +529
T WL+FK+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K
UC78_1267 +1236249 THHVWLMFKRNLEQDVQKIQKYLDAKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSND +1236546
CONCH_0163 +530 ----ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKL +629
+ IYLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKEDVFNKN LWIKEHLE +EL+ GHIK
UC78_1267 +1236549 FENIQSIYLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKNILWIKEHLEFMELVYGHIKAQ +1236846
CONCH_0163 +630 QESLEKNIINLERELENRHLQKQITKIK +657
+ +L KNI+ LE +L+ R L K + +++
UC78_1267 +1236849 ENALIKNILPLEEKLKERKLDKWMERVR +1236930
CONCH_0163 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical proteinScore: 1284.00 bits: 557.69 e-value: 0.000000
length: 625 gaps: 32 id: 329 positives: 419 coverage: 0.50 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
UC78_1276 +1245413 FELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +1245710
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNY +229
EL+ L+VL++ SL DI+ FFSN PFF F RIYFL+L NYYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+
UC78_1276 +1245713 ELQSARLMVLETSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHP +1246010
CONCH_0163 +230 SFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISF +329
S+ ELL KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK++IKPDYVLSLER+ TSEFFNNDFGEF+K+++F+ V+ +TI +
UC78_1276 +1246013 SYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKNVLFVCVSWVYPQTIKY +1246310
CONCH_0163 +330 L--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVK +429
L NN + + R S F + + ++G + PSVA MAY + L KNIIFIGQDLAYA DG SH ++Y Q LAY GN V+
UC78_1276 +1246313 LQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVE +1246610
CONCH_0163 +430 TNETWLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSN +529
+ W +F+ L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C I + +
UC78_1276 +1246613 SSGIWTMFRFSLQNTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYD +1246910
CONCH_0163 +530 RLN----FLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQES +629
++ L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKEDVFNKN LWIKEHLE +EL+ GHIK + +
UC78_1276 +1246913 KIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDVFNKNILWIKEHLEFMELVYGHIKAQENA +1247210
CONCH_0163 +630 LEKNIINLERELENRHLQKQITKIK +654
L KNI+ LE +L+ R L K + +++
UC78_1276 +1247213 LIKNILPLEEKLKERKLDKWMERVR +1247285
CONCH_0163 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factorScore: 1291.00 bits: 560.71 e-value: 0.000000
length: 615 gaps: 21 id: 331 positives: 410 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLY YGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
CJ.._06665 +1261613 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +1261910
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQV +229
VL++N L+ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL KRK
CJ.._06665 +1261913 VLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGIS +1262210
CONCH_0163 +230 NTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQR +329
+TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDI+FI+ V H TI +L NN + +
CJ.._06665 +1262213 DTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDIMFIVKSVTHPHTIKYLQKNNRAFILVST +1262510
CONCH_0163 +330 SSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLE +429
+ F +YL L FG SVA M+Y LT LN+KNII IGQDLAYA DG SH ++Y Q LAY GN V++ E W +F+ + E
CJ.._06665 +1262513 YASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDYKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSEIWTMFRLIFE +1262810
CONCH_0163 +430 FFIS--SSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRL +529
I NI TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C K + IYLS
CJ.._06665 +1262813 NDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFKKIQSIYLS--- +1263110
CONCH_0163 +530 NFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLER +629
L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE
CJ.._06665 +1263113 --LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEE +1263410
CONCH_0163 +630 ELENRHLQKQITKIK +644
+L+ R L K + +++
CJ.._06665 +1263413 KLKERKLDKWMERVR +1263455
CONCH_0163 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factorScore: 1309.00 bits: 568.47 e-value: 0.000000
length: 621 gaps: 28 id: 326 positives: 413 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
CJSA_1271 +1268812 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1269109
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L++L+ + LQ D L PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN S D LQGIE FVYNLP +I+ S+ EL
CJSA_1271 +1269112 ELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +1269409
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAK++IKPDYVLSLER+ TSEFFN DFGEF++D++F+ V+ +TI +L NN
CJSA_1271 +1269412 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNN +1269709
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ + R S F + + ++G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y Q LAY GN V++ W
CJSA_1271 +1269712 RNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIW +1270009
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+F+ L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
CJSA_1271 +1270012 TMFRFSLQNTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSI +1270309
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
CJSA_1271 +1270312 YLS-----LNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1270609
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
CJSA_1271 +1270612 ILPLEEKLKERKLDKWMERVR +1270672
CONCH_0163 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factorScore: 1310.00 bits: 568.90 e-value: 0.000000
length: 621 gaps: 28 id: 326 positives: 413 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
CJSA_1256 +1251082 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1251379
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L++L+ + LQ D L PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN S D LQGIE FVYNLP +I+ S+ EL
CJSA_1256 +1251382 ELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +1251679
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAK++IKPDYVLSLER+ TSEFFN DFGEF++D++F+ V+ +TI +L NN
CJSA_1256 +1251682 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNN +1251979
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ + R S F + + ++G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y Q LAY GN V++ W
CJSA_1256 +1251982 RNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIW +1252279
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+F+ L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
CJSA_1256 +1252282 TMFRFSLQNTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSI +1252579
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
CJSA_1256 +1252582 YLS-----LNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1252879
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
CJSA_1256 +1252882 ILPLEEKLKERKLDKWMERVR +1252942
CONCH_0163 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD proteinScore: 1276.00 bits: 554.24 e-value: 0.000000
length: 619 gaps: 28 id: 330 positives: 408 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
CJSA_1269 +1265003 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLM +1265300
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
CJSA_1269 +1265303 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1265600
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DF EF+KDI FI+ VVH I +L F
CJSA_1269 +1265603 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNF +1265900
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F YL L FG SVA MA +L+L L KNIIFIGQDLAYA +G SHP++Y TY + + LT AY G VKT WL+F
CJSA_1269 +1265903 TLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEPILTK-AYGGKGEVKTHHVWLMF +1266200
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLN--- +529
KQ LE I + ++ YNCTEGGARI IEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C I + +++
CJSA_1269 +1266203 KQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSF +1266500
CONCH_0163 +530 -FLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
CJSA_1269 +1266503 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1266800
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
CJSA_1269 +1266803 PLEEKLKERKLDKWMERVR +1266857
CONCH_0163 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function familyScore: 1124.00 bits: 488.67 e-value: 0.000000
length: 506 gaps: 26 id: 270 positives: 335 coverage: 0.56 query coverage 0.42
CONCH_0163 +145 FFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGP +244
FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL KRKN +TAIIVSTGP
IC..1_1265 +1288417 FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP +1288714
CONCH_0163 +245 SLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSL +344
SL KQLPLLK+YA A+IFCADSAYPILAK+ +KPDYVLSLERV+ETSEFFNNDF EF+KD+ F+L H T +L NN + + + F YL L
IC..1_1265 +1288717 SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL +1289014
CONCH_0163 +345 KKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSK--V +444
FG SVA MAY+L+L L KNIIFIGQDLAYA +G SHP+E+ +G D + I Y L T AY G V T E W LF+ + E + + +
IC..1_1265 +1289017 DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +1289314
CONCH_0163 +445 NIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNF +544
+ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K + IYLS L E++
IC..1_1265 +1289317 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLS-----LNEKEEDL +1289614
CONCH_0163 +545 SSIIKELDHFKNKF---EKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQ +644
I+++D FKNK E++ L E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K
IC..1_1265 +1289617 NLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKW +1289914
CONCH_0163 +645 ITKIKN +650
+ +++
IC..1_1265 +1289917 MERVEG +1289932
CONCH_0163 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factorScore: 1311.00 bits: 569.34 e-value: 0.000000
length: 621 gaps: 28 id: 326 positives: 414 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
ER.._01446 +1374875 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1375172
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L++L+ + LQ D L PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN S D LQGIE FVYNLP +I+ S+ EL
ER.._01446 +1375175 ELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +1375472
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK++IKPDYVLSLER+ TSEFFNNDFGEF++D++F+ V+ +TI +L NN
ER.._01446 +1375475 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDRDVLFVCVSWVYPQTIKYLQKNN +1375772
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ + R S F + + ++G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y Q LAY GN V++ W
ER.._01446 +1375775 RNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIW +1376072
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+F+ L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
ER.._01446 +1376075 TMFRFSLQNTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSI +1376372
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
ER.._01446 +1376375 YLS-----LNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1376672
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
ER.._01446 +1376675 ILPLEEKLKERKLDKWMERVR +1376735
CONCH_0163 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factorScore: 1311.00 bits: 569.34 e-value: 0.000000
length: 621 gaps: 30 id: 330 positives: 411 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
ER.._01430 +1357151 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1357448
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L++L+ + LQ D L PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN S D LQGIE FVYNLP +I+ S+ +L
ER.._01430 +1357451 ELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYTKL +1357748
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK++IKPDYV LER T+EFFN DFGEF++DIVFI + VVH K I +L
ER.._01430 +1357751 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLKGRN +1358048
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ G Y+ LK F SVA M +L LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY VKT W+L
ER.._01430 +1358051 LVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTK-AYGEKEEVKTHAIWIL +1358348
CONCH_0163 +430 FKQMLEFFI--SSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E I + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
ER.._01430 +1358351 FKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSI +1358648
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
ER.._01430 +1358651 YLS-----LNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1358948
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
ER.._01430 +1358951 ILPLEEKLKERKLDKWMERVR +1359011
CONCH_0163 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD proteinScore: 1276.00 bits: 554.24 e-value: 0.000000
length: 619 gaps: 28 id: 327 positives: 412 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
ER.._01444 +1371066 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLM +1371363
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ +LL K
ER.._01444 +1371366 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSK +1371663
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAK++IKPDYV LER T+EFFN DFGEF++++ FI+ VVH I +L F
ER.._01444 +1371666 RKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNF +1371963
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F YL L FG SVA MA +L+L L KNIIFIGQDLAYA +G SHP++Y TY + + LT AY G VKT WL+F
ER.._01444 +1371966 TLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEPILTK-AYGGKGEVKTHHVWLMF +1372263
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLN--- +529
KQ LE I + ++ YNCTEGGARI IEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C I + +++
ER.._01444 +1372266 KQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSF +1372563
CONCH_0163 +530 -FLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
ER.._01444 +1372566 MSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1372863
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
ER.._01444 +1372866 PLEEKLKERKLDKWMERVR +1372920
CONCH_0163 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factorScore: 1300.00 bits: 564.59 e-value: 0.000000
length: 621 gaps: 32 id: 330 positives: 416 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHN-GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKN +129
F+ I GKD LDIN N GGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+
H730_07620 +1368567 FELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQS +1368864
CONCH_0163 +130 NSLIVLDSNSLQPIDIQIL---FFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELL +229
L++L++ SL DI++ S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL
H730_07620 +1368867 ARLMILETSSL---DIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELL +1369164
CONCH_0163 +230 LKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNY +329
KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER+ T+EFFNNDFGEF+KDI+F++ V+ +TI +L NN
H730_07620 +1369167 SKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERIPLTAEFFNNDFGEFDKDILFVIKSWVYPQTIKYLQKNNR +1369464
CONCH_0163 +330 KTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY-YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ R S F + L +G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y K++ + ++ LAY GN V++ E W
H730_07620 +1369467 AFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFRRDKG-KFQCLAYGGNGKVESSEIW +1369764
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+F+ L+ IS V TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
H730_07620 +1369767 TMFRFSLQNTISKNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSI +1370064
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
H730_07620 +1370067 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKN +1370364
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
H730_07620 +1370367 ILPLEEKLKERKLDKWMERVR +1370427
CONCH_0163 vs: H730_07630 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: motility accessory factorScore: 1323.00 bits: 574.51 e-value: 0.000000
length: 617 gaps: 26 id: 333 positives: 408 coverage: 0.52 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHN-GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKN +129
F+ I GKD LDIN N GGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+
H730_07630 +1372376 FELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQS +1372673
CONCH_0163 +130 NSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKR +229
L++L+ + LQ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN S D LQGIE FVYNLP +I+ S+ ELL KR
H730_07630 +1372676 ARLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDSADTLQGIEQFVYNLPQMITHPSYKELLSKR +1372973
CONCH_0163 +230 KNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFL +329
K +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER +EFFNNDFGEF+KDIVFI + VVH K I +L V
H730_07630 +1372976 KGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAEFFNNDFGEFDKDIVFICAGVVHPKAIEYLKGRNLVIT +1373273
CONCH_0163 +330 QRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQM +429
Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G VKT W+LFK+
H730_07630 +1373276 QKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTK-AYGGKEEVKTHAIWILFKKY +1373573
CONCH_0163 +430 LEFFI--SSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSN +529
E I + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + IYLS
H730_07630 +1373576 FENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLS- +1373873
CONCH_0163 +530 RLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINL +629
L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ L
H730_07630 +1373876 ----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPL +1374173
CONCH_0163 +630 ERELENRHLQKQITKIK +646
E +L+ R L K + +++
H730_07630 +1374176 EEKLKERKLDKWMERVR +1374224
CONCH_0163 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factorScore: 1359.00 bits: 590.04 e-value: 0.000000
length: 618 gaps: 34 id: 342 positives: 419 coverage: 0.54 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++E + L YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
CJE1524 +1416360 FELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLM +1416657
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
CJE1524 +1416660 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1416957
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKT +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFNNDFGEF+KDIVF+ S VVH K I +L N K
CJE1524 +1416960 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKY +1417257
CONCH_0163 +330 VFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
+ + R F Y+ LK F L+ +PSVA M+YFL++ LN KNII IGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT E W+ F
CJE1524 +1417260 LIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEVWIFF +1417557
CONCH_0163 +430 KQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLS +529
KQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K + IYLS
CJE1524 +1417560 KQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLS +1417857
CONCH_0163 +530 NRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIIN +629
L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
CJE1524 +1417860 -----LNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILP +1418157
CONCH_0163 +630 LERELENRHLQKQITKIK +647
LE +L+ R L K + +++
CJE1524 +1418160 LEEKLKERKLDKWMERVR +1418211
CONCH_0163 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD proteinScore: 1356.00 bits: 588.75 e-value: 0.000000
length: 622 gaps: 38 id: 345 positives: 421 coverage: 0.54 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFIHN-GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKN +129
F+ I GKD LDIN N GGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+
AX.._06575 +1262543 FELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQS +1262840
CONCH_0163 +130 NSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNE +229
L+VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ E
AX.._06575 +1262843 ARLMVLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKE +1263140
CONCH_0163 +230 LLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--N +329
LL KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+F+ + VVH K I +L
AX.._06575 +1263143 LLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDILFVCAGVVHPKAIEYLKGR +1263440
CONCH_0163 +330 NYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNET +429
N K + R F Y+ LK F L+ +PSVA M+YFL++ LN KNIIFIGQDLAYA++G SHP++Y Y Q + LT AY G +KT E
AX.._06575 +1263443 NRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYKHILTE-AYGGKKEIKTHEV +1263740
CONCH_0163 +430 WLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------EC +529
W+ FKQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K +
AX.._06575 +1263743 WIFFKQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQS +1264040
CONCH_0163 +530 IYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEK +629
IYL L E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L K
AX.._06575 +1264043 IYLN-----LNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIK +1264340
CONCH_0163 +630 NIINLERELENRHLQKQITKIK +651
NI+ LE +L+ R L K + +++
AX.._06575 +1264343 NILPLEEKLKERKLDKWMERVR +1264406
CONCH_0163 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD proteinScore: 1309.00 bits: 568.47 e-value: 0.000000
length: 616 gaps: 28 id: 331 positives: 406 coverage: 0.52 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
AX.._06490 +1245722 FELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +1246019
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
AX.._06490 +1246022 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1246319
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDI+F+ + VVH KTI +L N +
AX.._06490 +1246322 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVCAGVVHPKTIEYLKNKTFII +1246619
CONCH_0163 +330 LQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
Q+ F Y+ LK F SVA MAY L KNIIFIGQDLAYA+DG SH ++Y Q LAY G+ ++ E W +F+
AX.._06490 +1246622 TQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRF +1246919
CONCH_0163 +430 MLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNR +529
L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + IYL
AX.._06490 +1246922 FLQDTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLN-- +1247219
CONCH_0163 +530 LNFLINDEKNFSSIIKELDHFKNKFEKINFLNELLNPLNT---QFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLE +629
L E + I+++D FKNK E I + +L L T QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE
AX.._06490 +1247222 ---LNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLE +1247519
CONCH_0163 +630 RELENRHLQKQITKIK +645
+L+ R L K + +++
AX.._06490 +1247522 EKLKERKLDKWMERVR +1247567
CONCH_0163 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD proteinScore: 1271.00 bits: 552.08 e-value: 0.000000
length: 619 gaps: 25 id: 326 positives: 408 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
AX.._06565 +1258725 FELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +1259022
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
AX.._06565 +1259025 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1259322
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKT +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDI+F+L VH T +L NN
AX.._06565 +1259325 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNF +1259622
CONCH_0163 +330 VFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
+ + + F YL L FG SVA M + L + L KNI+ IGQDLAYA+DG SH ++Y Q TT AY N V++ W LF
AX.._06565 +1259625 MLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSHTKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLF +1259922
CONCH_0163 +430 KQMLEFFISSSKVN--IATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI----YLSNRL +529
++ E ++ +K N I TYNCTEGGARI+ IEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C + I + N
AX.._06565 +1259925 RHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSF +1260222
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N ++N IIK++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ HIK + +L KNI+
AX.._06565 +1260225 MSLQNSQENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYEHIKAQENALIKNIL +1260522
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
AX.._06565 +1260525 PLEEKLKERKLDKWMERVR +1260579
CONCH_0163 vs: CjjRM3196_1335 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 2001bp / 667aa PV: Yes
Function: hypothetical proteinScore: 1348.00 bits: 585.30 e-value: 0.000000
length: 629 gaps: 39 id: 341 positives: 420 coverage: 0.51 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
Cj..6_1335 +1288184 FELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1288481
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNY +229
EL+ L+VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+
Cj..6_1335 +1288484 ELQKSRLMVLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHP +1288781
CONCH_0163 +230 SFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISF +329
S+ ELL KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADSAYPILAK+ +KPDYVLSLERV+ETSEFFNNDF EF+KD+ F+L H T +
Cj..6_1335 +1288784 SYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKY +1289081
CONCH_0163 +330 L--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVK +429
L NN + + + F YL L FG SVA MAY+L+L L KNIIFIGQDLAYA +G SHP+E+ +G D + I Y L T AY G V
Cj..6_1335 +1289084 LQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVY +1289381
CONCH_0163 +430 TNETWLLFKQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK----- +529
T E W LF+ + E + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K
Cj..6_1335 +1289384 TQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDD +1289681
CONCH_0163 +530 ----ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKF---EKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKL +629
+ IYLS L E++ I+++D FKNK E++ L E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK
Cj..6_1335 +1289684 FENIQSIYLS-----LNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQ +1289981
CONCH_0163 +630 QESLEKNIINLERELENRHLQKQITKIKN +658
+ +L KNI+ LE +L+ R L K + +++
Cj..6_1335 +1289984 ESALIKNILPLEEKLKERKLNKWMERVEG +1290068
CONCH_0163 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation dataScore: 659.00 bits: 288.09 e-value: 0.000000
length: 248 gaps: 0 id: 156 positives: 184 coverage: 0.54 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++E + L YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
CJS3_1430 +1321641 FELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLM +1321938
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQV +229
VL++N L+ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL KRK
CJS3_1430 +1321941 VLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGIS +1322238
CONCH_0163 +230 NTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYV +277
+TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV
CJS3_1430 +1322241 DTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1322382
Score: 716.00 bits: 312.67 e-value: 0.000000
length: 366 gaps: 24 id: 186 positives: 235 coverage: 0.54 query coverage 0.54
CONCH_0163 +277 VLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAY +376
L LER T+EFFNNDFGEF+KDIVF+ S VVH K I +L N K + + R F Y+ LK F L+ +PSVA M+YFL++ LN KNII IGQDLAY
CJS3_1430 +1322381 CLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAY +1322678
CONCH_0163 +377 ADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFA +476
A++G SHP++Y Y Q ++ LT AY G +KT E W+ FKQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF
CJS3_1430 +1322681 AENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFE +1322978
CONCH_0163 +477 kleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLA +576
KLE L NKQ E +LK++YK+ + IK C K + IYLS L E+ I+++D FKNK E I + E+L PL TQFELNLA
CJS3_1430 +1322981 KLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLS-----LNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLA +1323278
CONCH_0163 +577 RIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +642
RIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
CJS3_1430 +1323281 RIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1323476
CONCH_0163 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation dataScore: 644.00 bits: 281.62 e-value: 0.000000
length: 253 gaps: 10 id: 157 positives: 185 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++E + L YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
CJS3_1427 +1317824 FELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLM +1318121
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
+L + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
CJS3_1427 +1318124 ILQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1318421
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYV +282
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV
CJS3_1427 +1318424 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1318580
Score: 642.00 bits: 280.75 e-value: 0.000000
length: 367 gaps: 15 id: 168 positives: 226 coverage: 0.50 query coverage 0.51
CONCH_0163 +277 VLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAY +376
L LER +E FNNDFGEF+KDIVFI+ V H TI +L NN + + + F +YL L FG SVA M + LT+ L +KNII IGQDLAY
CJS3_1427 +1318564 CLYLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAY +1318861
CONCH_0163 +377 ADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSKVN--IATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKP +476
A DG +H + + + + + +T AY GN V++ E W LF++ E I K+N I TYNCTEGGARI+ TIEKPF C+ LL +++ KP
CJS3_1427 +1318864 AKDGQTHSQGFIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKP +1319161
CONCH_0163 +477 FAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLN----FLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNL +576
F KLE L NKQ E +LK++YK++Q IK C I + +++ L N +KN II+++D K + +++ L ++L PL TQFELNL
CJS3_1427 +1319164 FEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNL +1319461
CONCH_0163 +577 ARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +643
ARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
CJS3_1427 +1319464 ARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1319662
CONCH_0163 vs: A0W69_07845 in WP2202 (Campylobacter jejuni strain WP2202, complete genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD proteinScore: 1307.00 bits: 567.61 e-value: 0.000000
length: 604 gaps: 35 id: 329 positives: 404 coverage: 0.55 query coverage 0.52
CONCH_0163 +47 GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI +146
GGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+VFEK++E I++ FH +DFS EL+N L++L + SL DI+
A0.._07845 +1463611 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSL---DIE- +1463908
CONCH_0163 +147 LFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTG +246
FFSN PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ ELL KRK +TAIIVSTG
A0.._07845 +1463911 -FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTG +1464208
CONCH_0163 +247 PSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYLSLK +346
PSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDI+FI + VVH K I +L + V Q+ F Y+ LK
A0.._07845 +1464211 PSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLKDRNLVITQKVLAFPYYINLK +1464508
CONCH_0163 +347 KFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML--EFFISSSKVN +446
F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLLFK E + K+
A0.._07845 +1464511 DFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMG +1464808
CONCH_0163 +447 IATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFS +546
I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C K + IYLS L E++
A0.._07845 +1464811 ITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFENIQSIYLS-----LNEKEEDIN +1465108
CONCH_0163 +547 SIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQI +646
I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K +
A0.._07845 +1465111 LAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWM +1465408
CONCH_0163 +647 TKIK +650
+++
A0.._07845 +1465411 ERVR +1465420
CONCH_0163 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical proteinScore: 1309.00 bits: 568.47 e-value: 0.000000
length: 621 gaps: 28 id: 326 positives: 413 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVVFEK++E I++ FH +DFS
QZ67_01471 +1340434 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1340731
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L++L+ + LQ D L PFF F RIYFL+L YYE++++D+L+LN KL ++ K I+S GN S D LQGIE FVYNLP +I+ S+ EL
QZ67_01471 +1340734 ELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +1341031
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAK++IKPDYVLSLER+ TSEFFN DFGEF++D++F+ V+ +TI +L NN
QZ67_01471 +1341034 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNN +1341331
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ + R S F + + ++G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y Q LAY GN V++ W
QZ67_01471 +1341334 RNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIW +1341631
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+F+ L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
QZ67_01471 +1341634 TMFRFSLQNTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSI +1341931
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNEL---LNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + +L L L QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
QZ67_01471 +1341934 YLS-----LNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1342231
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
QZ67_01471 +1342234 ILPLEEKLKERKLDKWMERVR +1342294
CONCH_0163 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factorScore: 1341.00 bits: 582.28 e-value: 0.000000
length: 621 gaps: 30 id: 336 positives: 412 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
N149_1281 +1278172 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSH +1278469
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L+VL +N L+ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN +DALQGIE FVYNLP +I+ S+ EL
N149_1281 +1278472 ELQNSRLMVLSTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPKDALQGIEQFVYNLPQMITHPSYKEL +1278769
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVF+ + VVH KTI +L N
N149_1281 +1278772 LSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLKNKT +1279069
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
+ Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ L T+AY GN V+T WLL
N149_1281 +1279072 FIITQKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHIL-TIAYGGNGKVETHSIWLL +1279369
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ Q I+ C K + +
N149_1281 +1279372 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCQSIEHCRDFSKILSNDFEKIQSV +1279669
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E+ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
N149_1281 +1279672 YLS-----LNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1279969
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
N149_1281 +1279972 ILPLEEKLKERKLDKWMERVR +1280032
CONCH_0163 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factorScore: 1300.00 bits: 564.59 e-value: 0.000000
length: 616 gaps: 28 id: 329 positives: 405 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
N149_1298 +1294966 FELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +1295263
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
N149_1298 +1295266 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1295563
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDIVF+ + VVH KTI +L N +
N149_1298 +1295566 RKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFII +1295863
CONCH_0163 +330 LQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
Q+ F Y+ LK F SVA MAY L KNIIFIGQDLAYA+DG SH ++Y Q LAY G+ ++ E W +F+
N149_1298 +1295866 TQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRF +1296163
CONCH_0163 +430 MLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNR +529
L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K + +YL
N149_1298 +1296166 FLQDTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLN-- +1296463
CONCH_0163 +530 LNFLINDEKNFSSIIKELDHFKNKFEKINFLNELLNPLNT---QFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLE +629
L E + I+++D FKNK E I + +L L T QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE
N149_1298 +1296466 ---LNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLE +1296763
CONCH_0163 +630 RELENRHLQKQITKIK +645
+L+ R L K + +++
N149_1298 +1296766 EKLKERKLDKWMERVR +1296811
CONCH_0163 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factorScore: 1264.00 bits: 549.06 e-value: 0.000000
length: 619 gaps: 28 id: 326 positives: 408 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDK+LLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
N149_1296 +1291157 FELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +1291454
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
N149_1296 +1291457 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +1291754
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
N149_1296 +1291757 RKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1292054
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y Y Q + LT AY G +KT WL+F
N149_1296 +1292057 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYKHILTE-AYGGKEKIKTHHVWLMF +1292354
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLC----DSLHKECIYLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C D K + N
N149_1296 +1292357 KRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSF +1292654
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
N149_1296 +1292657 TSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1292954
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
N149_1296 +1292957 PLEEKLKERKLDKWMERVR +1293011
CONCH_0163 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD proteinScore: 1318.00 bits: 572.36 e-value: 0.000000
length: 616 gaps: 28 id: 332 positives: 408 coverage: 0.52 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
AB.._08255 +1558461 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLM +1558758
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
AB.._08255 +1558761 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSK +1559058
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK++IKPDYVLSLER+ TSEFFNNDFGEF+KDIVF+ + VVH KTI +L N +
AB.._08255 +1559061 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFII +1559358
CONCH_0163 +330 LQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
Q+ F Y+ LK F SVA MAY L KNIIFIGQDLAYA DG SH ++Y Q LAY G+ ++ E W +F+
AB.._08255 +1559361 TQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRF +1559658
CONCH_0163 +430 MLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNR +529
L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + +YLS
AB.._08255 +1559661 FLQDTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLS-- +1559958
CONCH_0163 +530 LNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLE +629
L E++ IK++D FKNK E I + E+L PL QFELNLA+IYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE
AB.._08255 +1559961 ---LNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLE +1560258
CONCH_0163 +630 RELENRHLQKQITKIK +645
+L+ R L K + +++
AB.._08255 +1560261 EKLKERKLDKWMERVR +1560306
CONCH_0163 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1265.00 bits: 549.49 e-value: 0.000000
length: 619 gaps: 28 id: 326 positives: 408 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
AB.._08325 +1571458 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLM +1571755
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
AB.._08325 +1571758 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSK +1572055
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
AB.._08325 +1572058 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +1572355
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT WL+F
AB.._08325 +1572358 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKEKIKTHHVWLMF +1572655
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLC----DSLHKECIYLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C D K + N
AB.._08325 +1572658 KRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSF +1572955
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
AB.._08325 +1572958 TSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +1573255
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
AB.._08325 +1573258 PLEEKLKERKLDKWMERVR +1573312
CONCH_0163 vs: AB430_08340 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD proteinScore: 1320.00 bits: 573.22 e-value: 0.000000
length: 599 gaps: 25 id: 326 positives: 402 coverage: 0.55 query coverage 0.51
CONCH_0163 +47 GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI +146
GGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL+ + LQ D
AB.._08340 +1575334 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +1575631
CONCH_0163 +147 LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIK +246
L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ +LL KRKN +TAIIVSTGPSLIK
AB.._08340 +1575634 LCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLIK +1575931
CONCH_0163 +247 QLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYLSLKKFGNL +346
QLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVF+ + VVH KTI +L N + Q+ F Y+ LK F
AB.._08340 +1575934 QLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYA +1576231
CONCH_0163 +347 HSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML--EFFISSSKVNIATYN +446
SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ L T+AY GN V+T WLLFK E + K+ I TYN
AB.._08340 +1576234 AVGFSVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHIL-TIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYN +1576531
CONCH_0163 +447 CTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKE +546
CTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + +YLS L E++ IK+
AB.._08340 +1576534 CTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSVYLS-----LNEKEEDINLAIKK +1576831
CONCH_0163 +547 LDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +645
+D FKNK E I + E+L PL QFELNLA+IYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
AB.._08340 +1576834 IDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1577128
CONCH_0163 vs: ATE51_00894 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1945bp / 648aa PV: Yes
Function: hypothetical proteinScore: 1310.00 bits: 568.90 e-value: 0.000000
length: 597 gaps: 21 id: 325 positives: 399 coverage: 0.50 query coverage 0.51
CONCH_0163 +47 GGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI +146
GGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL+ + LQ D
AT.._00894 +455053 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +455350
CONCH_0163 +147 LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIK +246
L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ +LL KRKN +TAIIVSTGPSL K
AT.._00894 +454753 LCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTK +455050
CONCH_0163 +247 QLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYLSLKKFGNL +346
QLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVF+ + VVH KTI +L N + Q+ F Y+ LK F
AT.._00894 +454453 QLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFIITQKVLAFPYYINLKNFCYA +454750
CONCH_0163 +347 HSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML--EFFISSSKVNIATYN +446
SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ L T+AY GN V+T WLLFK E + K+ I TYN
AT.._00894 +454153 AVGFSVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHIL-TIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYN +454450
CONCH_0163 +447 CTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIN-------DEKNFSSIIKELD +546
CTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K LSN N + N E + I+++D
AT.._00894 +453853 CTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSK---ILSNDFNNIQNIYLNLNKKENDLNLAIRKID +454150
CONCH_0163 +547 HFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +643
FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
AT.._00894 +453553 EFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +453841
CONCH_0163 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical proteinScore: 1256.00 bits: 545.61 e-value: 0.000000
length: 619 gaps: 28 id: 325 positives: 407 coverage: 0.50 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
AT.._00898 +458929 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLM +459226
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+ GN DALQGIE FVYNLP +I+ S+ ELL K
AT.._00898 +458629 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVFHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +458926
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
AT.._00898 +458329 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +458626
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT WL+F
AT.._00898 +458029 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKEKIKTHHVWLMF +458326
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLC----DSLHKECIYLSNRL +529
K+ LE + + ++ YNCTEGGARI TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + I+ C D K + N
AT.._00898 +457729 KRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSF +458026
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
AT.._00898 +457429 TSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +457726
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
AT.._00898 +457129 PLEEKLKERKLDKWMERVR +457183
CONCH_0163 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical proteinScore: 1305.00 bits: 566.75 e-value: 0.000000
length: 616 gaps: 28 id: 329 positives: 406 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
AT.._00928 +471925 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +472222
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
AT.._00928 +471625 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +471922
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK++IKPDYVLSLER+ TSEFFNNDFGEF+KDIVF+ + VVH KTI +L N +
AT.._00928 +471325 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLKNKTFII +471622
CONCH_0163 +330 LQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
Q+ F Y+ LK F SVA MAY L KNIIFIGQDLAYA+DG SH ++Y Q LAY G+ ++ E W +F+
AT.._00928 +471025 TQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRF +471322
CONCH_0163 +430 MLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYLSNR +529
L+ IS + TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K + +YL
AT.._00928 +470725 FLQDTISRNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLN-- +471022
CONCH_0163 +530 LNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLE +629
L E + I+++D FKNK E I + E+L PL QFELNLA+IYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE
AT.._00928 +470425 ---LNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLE +470722
CONCH_0163 +630 RELENRHLQKQITKIK +645
+L+ R L K + +++
AT.._00928 +470125 EKLKERKLDKWMERVR +470170
CONCH_0163 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD proteinScore: 1283.00 bits: 557.26 e-value: 0.000000
length: 619 gaps: 28 id: 331 positives: 411 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
YSQ_02185 +448668 FELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLM +448965
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++D+L+LN KL E K ILS GN DALQGIE FVYNLP +I+ S+ ELL K
YSQ_02185 +448368 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYSILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +448665
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RKN +TAIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAK++IKPDYV LER T+EFFN DFGEF++++ FI+ VVH I +L F
YSQ_02185 +448068 RKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNF +448365
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F YL L FG SVA MA +L+L L KNIIFIGQDLAYA +G SHP++Y TY + + LT AY G VKT WL+F
YSQ_02185 +447768 TLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEPILTK-AYGGKGEVKTHHVWLMF +448065
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLC----DSLHKECIYLSNRL +529
KQ LE I + ++ YNCTEGGARI IEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C D K + N
YSQ_02185 +447468 KQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSF +447765
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLA+IYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
YSQ_02185 +447168 TSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +447465
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
YSQ_02185 +446868 PLEEKLKERKLDKWMERVR +446922
CONCH_0163 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD proteinScore: 1349.00 bits: 585.73 e-value: 0.000000
length: 619 gaps: 30 id: 338 positives: 412 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
YSQ_02175 +444859 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +445156
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL++N L+ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN S D LQGIE FVYNLP +I+ S+ EL
YSQ_02175 +444559 ELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +444856
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVFI + VVH K I +L
YSQ_02175 +444259 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN +444556
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA M+YFL++ LN KNIIFIGQDLAYA++G SHP++Y Y Q + LT AY G +KT E W+
YSQ_02175 +443959 LVITQKVLAFPYYINLKDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYKHILTE-AYGGKKEIKTHEVWIF +444256
CONCH_0163 +430 FKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECIYL +529
FKQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K + +YL
YSQ_02175 +443659 FKQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYL +443956
CONCH_0163 +530 SNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
S L E+ I+++D FKNK E I + E+L PL QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
YSQ_02175 +443359 S-----LNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +443656
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K + +++
YSQ_02175 +443059 PLEEKLKERKLDKWMERVR +443113
CONCH_0163 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1305.00 bits: 566.75 e-value: 0.000000
length: 622 gaps: 30 id: 331 positives: 414 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
YSQ_02255 +462590 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSS +462887
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL++N L+ D L S PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN S D LQGIE FVYNLP +I+ S+ EL
YSQ_02255 +462290 ELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKEL +462587
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF++D++F+ V+ +TI +L NN
YSQ_02255 +461990 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDQDVLFVCISWVYPQTIKYLQKNN +462287
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY-YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNET +429
+ R S F + L +G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y K++ + ++ LAY GN V++ E
YSQ_02255 +461690 RAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFRRDKG-KFQCLAYGGNGKVESSEI +461987
CONCH_0163 +430 WLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------EC +529
W +F+ L+ IS V TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K +
YSQ_02255 +461390 WTMFRFSLQNTISKNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQS +461687
CONCH_0163 +530 IYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEK +629
+YLS L E+ I+++D FKNK E I + E+L PL QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L K
YSQ_02255 +461090 VYLS-----LNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIK +461387
CONCH_0163 +630 NIINLERELENRHLQKQITKIK +651
NI+ LE +L+ R L K + +++
YSQ_02255 +460790 NILPLEEKLKERKLDKWMERVR +460853
CONCH_0163 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical proteinScore: 950.00 bits: 413.61 e-value: 0.000000
length: 591 gaps: 14 id: 260 positives: 359 coverage: 0.51 query coverage 0.41
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F QGKD LDIN I +Y + + EL++ L+ + D PVL+FYGFGNGILYK LLQN+ ++I++FEKELE I+L+ ++DFS++L LI
YSS_07245 +1357451 FTFTQGKDNLDINIIKKRNLKKMYQDPIKELEKNLEYFKDFTRY-PVLFFYGFGNGILYKILLQNQALKRIIIFEKELELIFLALNFIDFSKDLSLGRLI +1357748
CONCH_0163 +130 VL--DSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKN +229
+L D L +D + F+ R Y L + ++YE Y++DILKLN + IK L GN +DA+QGIE FVYNLP +I+ S+ ELL KRK
YSS_07245 +1357751 ILHHDDINLPKMDKVFRLIGDLFY---RSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRGNDPKDAMQGIEQFVYNLPQMITHPSYKELLSKRKG +1358048
CONCH_0163 +230 QVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFL +329
+TAIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER +E FNNDF +F+KDI+F+++ +VHKKTIS+L N K + +
YSS_07245 +1358051 ISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLEKNQRKYILI +1358348
CONCH_0163 +330 QRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQM +429
+ F R L L +G + SV+ MAY L NL KNII IGQDLAYA DG +H + + + + + +T AY GN V++ E W LF+Q+
YSS_07245 +1358351 IKGQPFARCLGLDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQI +1358648
CONCH_0163 +430 LEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLINDEKN +529
E FI+ SK TYNCT+GGARI+ IEKPFK+ C++LL + K F KL+ LN +Q +L LK + KI + + L KEC + ++ L +
YSS_07245 +1358651 FENFIAFSKSK--TYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKKECKKVQKQIHNLTHGKNK +1358948
CONCH_0163 +530 FS--SIIKELDHFKNKF--EKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLE +620
S I + +D K K +K FL E+L P + + L +Y+ + K D NK + WI H +E II ++ + L+ I+ L+
YSS_07245 +1358951 LSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKLFAWIYAHESLMENIIELLEAQDKRLKIAILPLQ +1359221
CONCH_0163 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1330.00 bits: 577.53 e-value: 0.000000
length: 621 gaps: 28 id: 334 positives: 412 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
YSS_07160 +1339348 FELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSN +1339645
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L+VL+ + LQ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ EL
YSS_07160 +1339648 ELQNARLMVLENDKLQAQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1339945
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NN +329
L KRK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDI+F+ V+ +TI +L NN
YSS_07160 +1339948 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFVCISWVYPQTIKYLQKNN +1340245
CONCH_0163 +330 YKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETW +429
+ R S F + L +G + PSVA MAY LN+KNIIFIGQDLAYA DG SH ++Y Q LAY GN V++ W
YSS_07160 +1340248 RAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIW +1340545
CONCH_0163 +430 LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
+F+ L+ IS V TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K + I
YSS_07160 +1340548 TMFRFSLQNTISKNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFNKILSNDFEKIQSI +1340845
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
YSS_07160 +1340848 YLS-----LNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1341145
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
YSS_07160 +1341148 ILPLEEKLKERKLDKWMERVR +1341208
CONCH_0163 vs: YSS_07240 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1356.00 bits: 588.75 e-value: 0.000000
length: 621 gaps: 30 id: 338 positives: 412 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
YSS_07240 +1355508 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSN +1355805
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L+VL+ + LQ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
YSS_07240 +1355808 ELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1356105
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVFI + VVH K I +L
YSS_07240 +1356108 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRN +1356405
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
YSS_07240 +1356408 LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +1356705
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + +
YSS_07240 +1356708 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSV +1357005
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YL L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KN
YSS_07240 +1357008 YLG-----LNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKN +1357305
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
YSS_07240 +1357308 ILPLEEKLKERKLDKWMERVR +1357368
CONCH_0163 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1361.00 bits: 590.90 e-value: 0.000000
length: 621 gaps: 30 id: 340 positives: 414 coverage: 0.52 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
YSU_02270 +464883 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSH +465180
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+ L+VL++N L+ D L S PFF F RIYFL+L YYE++++DIL LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
YSU_02270 +464583 ELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +464880
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYK +329
L KRK +TAIIVSTGPSLIKQLPLLK+YAN A+IFCADS+YPILAK+ IKPDYV LER T+EFFNNDFGEF+KDI+FI + VVH K I +L
YSU_02270 +464283 LSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDFGEFDKDIIFICAGVVHPKAIEYLKGRN +464580
CONCH_0163 +330 TVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLL +429
V Q+ F Y+ LK F SVA +L L KNIIFIGQDLAYA++G SHP++Y Y Q ++ LTT AY GN V+T WLL
YSU_02270 +463983 LVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTT-AYGGNGKVETHSIWLL +464280
CONCH_0163 +430 FKQML--EFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK---------ECI +529
FK E + K+ I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K + I
YSU_02270 +463683 FKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSI +463980
CONCH_0163 +530 YLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKN +629
YLS L E++ I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHL+ +EL+ GHIK + +L KN
YSU_02270 +463383 YLS-----LNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLKFMELVYGHIKAQESALIKN +463680
CONCH_0163 +630 IINLERELENRHLQKQITKIK +650
I+ LE +L+ R L K + +++
YSU_02270 +463083 ILPLEEKLKERKLDKWMERVR +463143
CONCH_0163 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD proteinScore: 1349.00 bits: 585.73 e-value: 0.000000
length: 616 gaps: 30 id: 340 positives: 418 coverage: 0.53 query coverage 0.53
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ + GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+
YSU_02210 +450924 FELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLM +451221
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
YSU_02210 +450624 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +450921
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKT +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+KDIVF+ + VVH K I +L N K
YSU_02210 +450324 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKY +450621
CONCH_0163 +330 VFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
+ + R F Y+ LK F L+ +PSVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT E W+ F
YSU_02210 +450024 LIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKKEIKTHEVWIFF +450321
CONCH_0163 +430 KQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIN- +529
KQ+LE I K I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK+ + IK C K LSN N + N
YSU_02210 +449724 KQILEAMI--IKYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSK---ILSNDFNNIQNI +450021
CONCH_0163 +530 ------DEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLE +629
E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE
YSU_02210 +449424 YLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLE +449721
CONCH_0163 +630 RELENRHLQKQITKIK +645
+L+ R L K + +++
YSU_02210 +449124 EKLKERKLDKWMERVR +449169
CONCH_0163 vs: A6K30_02235 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1766bp / 588aa PV: Yes
Function: PseD proteinScore: 745.00 bits: 325.18 e-value: 0.000000
length: 281 gaps: 8 id: 178 positives: 210 coverage: 0.54 query coverage 0.50
CONCH_0163 +33 IQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELK +132
I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+
A6.._02235 +453001 ILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQ +453298
CONCH_0163 +133 NNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +232
L+VL++N L+ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
A6.._02235 +452701 SARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +452998
CONCH_0163 +233 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFIL +313
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYVLSLER+ TSEFFNNDFGEF+KDI+F L
A6.._02235 +452401 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILFDL +452641
Score: 422.00 bits: 185.85 e-value: 0.000000
length: 348 gaps: 37 id: 139 positives: 188 coverage: 0.54 query coverage 0.50
CONCH_0163 +309 VHKKTISFLNNYKTV----FLQRSSGFTRYLSLKKFGNLHS----SPSVAIMAY-FLTLNLNFKNIIFI--------GQDLAYADDGSSHPEEYYYGKYD +408
V+ +TI +L K + R S F +S+ F + + MAY F LN+KN F+ D Y D +HP++Y + +
A6.._02235 +452144 VYPQTIKYLQKNKIEHILYYTSRPSSFIETISI--FAHMAM*VKWAKCCYNMAYEFDIRHLNYKNYSFL*DRI*LMQKMDFPYTKDYKTHPDDYQHEGHF +452441
CONCH_0163 +409 TYNPQEIDYSLTTLAYNGNHHVKTNETW-LLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlk +508
+ E + LAY GN V++ + L+ IS V TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK
A6.._02235 +451844 QRDKGE---HIQCLAYGGNGKVESSGILDYVLDLSLQNTISKNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +452141
CONCH_0163 +509 SFYKIHQVIKLCDSLHKECIYLSNRLNFLIN-------DEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNTQFELNLARIYVLNPKTKEDVFNKNY +608
++YK+ + IK C K LSN + N E + I+++D FKNK E I + E+L PL TQFELNLARIYVLNPKTKED FNK
A6.._02235 +451544 AYYKVCKSIKHCRDFNK---ILSNDFEKIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +451841
CONCH_0163 +609 LWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIK +656
LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
A6.._02235 +451244 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +451385
CONCH_0163 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1279.00 bits: 555.53 e-value: 0.000000
length: 619 gaps: 28 id: 327 positives: 410 coverage: 0.51 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ I GKD LDIN LY N ++EL+ L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS EL+N L+
A6.._02165 +440632 FELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLM +440929
CONCH_0163 +130 VLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLK +229
VL + SL DI+ FFSN PFF F RIYFL+L YYE++++D+L+LN KL E K I+S GN DALQGIE FVYNLP +I+ S+ ELL K
A6.._02165 +440332 VLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +440629
CONCH_0163 +230 RKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVF +329
RK +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYV LER T+EFFN DFGEF+ I FI+ +VH I +L F
A6.._02165 +440032 RKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNF +440329
CONCH_0163 +330 LQRS--SGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLF +429
S + F +YL L FG SVA MA +L+L LN KNIIFIGQDLAYA++G SHP++Y Y Q ++ LT AY G +KT WL+F
A6.._02165 +439732 TIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEHILTE-AYGGKEKIKTHHVWLMF +440029
CONCH_0163 +430 KQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLC----DSLHKECIYLSNRL +529
K+ LE + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C D K + N
A6.._02165 +439432 KRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSF +439729
CONCH_0163 +530 NFLINDEKN---FSSIIKELDHFKNKFEKI----NFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +629
L N +KN II+++D K + +++ L ++L PL TQFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
A6.._02165 +439132 TSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +439429
CONCH_0163 +630 NLERELENRHLQKQITKIK +648
LE +L+ R L K +++
A6.._02165 +438832 PLEEKLKERKLDKWTERVR +438886
CONCH_0163 vs: A6K30_02155 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1977bp / 659aa PV: Yes
Function: PseD proteinScore: 670.00 bits: 292.83 e-value: 0.000000
length: 257 gaps: 8 id: 162 positives: 190 coverage: 0.51 query coverage 0.52
CONCH_0163 +30 FKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSE +129
F+ I GKD LDIN NGGGY LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E I++ FH +DFS
A6.._02155 +436823 FELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSN +437120
CONCH_0163 +130 ELKNNSLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNEL +229
EL+N L+VL+ + LQ D L S PFF F RIYFL+L YYE++++D+L+LN KL E K IIL NGN DALQGIE FVYNLP +I+ S+ EL
A6.._02155 +436523 ELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +436820
CONCH_0163 +230 LLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVL +286
L KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADS+YPILAK+ IKPDYVL
A6.._02155 +436223 LSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVL +436391
Score: 190.00 bits: 85.78 e-value: 0.000000
length: 144 gaps: 9 id: 60 positives: 78 coverage: 0.51 query coverage 0.52
CONCH_0163 +280 LERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQRSSGFTRYL-SLKKFGNL----HSSPSVAIMAYFLTLNLNFKNIIFIGQDLAY +379
LER T+EFFN DFGEF+KDIVFI + VVH K I +L K +SS L ++ K L H +L L KNIIFIGQDLAY
A6.._02155 +436048 LERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKG*KFSHNSKSSMLLSILYTILKI*FLCML*HGLKCCTYDLSYLATYLSHKNIIFIGQDLAY +436345
CONCH_0163 +380 ADDGSSHPEEYY-YGKYDTYNPQEIDYSLT-TLAYNGNHHVKTN +423
A++G SHP++Y Y+ + +ID + AY GN V++
A6.._02155 +435748 AENGNSHPDDYQNSANYERH--FQIDMNIF*RTAYGGNGKVESS +435877
Score: 190.00 bits: 85.78 e-value: 0.000000
length: 160 gaps: 20 id: 66 positives: 90 coverage: 0.51 query coverage 0.52
CONCH_0163 +411 HHVKTNETWLLFKQM---LEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHK +510
+K WLLFK + ++ F K +I TYNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L NKQ E +LK++YK++Q IK C K
A6.._02155 +435639 EKLKAHSIWLLFKLIGLKMK*FQILEKWDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK +435936
CONCH_0163 +511 ---------ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLN---ELLNPLNT +570
+ +YL L E++ I+++D FKNK E I + E+L PL T
A6.._02155 +435339 ILSNDFEKIQSVYLG-----LNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRT +435516
Score: 215.00 bits: 96.56 e-value: 0.000000
length: 74 gaps: 0 id: 46 positives: 57 coverage: 0.51 query coverage 0.52
CONCH_0163 +556 QFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIKN +629
QFELNLARIYVLNPKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+ LE +L+ R L K + +++
A6.._02155 +435173 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +435392
CONCH_0163 vs: CINS_0156 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1959bp / 653aa PV: Yes
Function: motility accessory factorScore: 1570.00 bits: 681.06 e-value: 0.000000
length: 610 gaps: 7 id: 358 positives: 446 coverage: 0.55 query coverage 0.56
CONCH_0163 +30 FKTIQGKDPLDINFIHN--GGGYT-LYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNN +129
F+ G D LDINFI GGGY +Y++ L +L EK+K Y+DKY LYP+LYFYGFGNGILYK LLQNK QKIVVFE+ELEFI+LSFHY+DFSEELK N
CINS_0156 +141056 FQVQIGDDSLDINFIKENYGGGYNKIYDDALFDLHEKIKTYDDKYFLYPILYFYGFGNGILYKVLLQNKHHQKIVVFEQELEFIFLSFHYIDFSEELKTN +141353
CONCH_0163 +130 SLIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRK +229
SLI+ D+ ++ D + + PFFNFLR+YFLDL C+YYEKYQ DILK+N ++QEHIK+II GN S+D+L G++NF++N+P+I+S +F ELL KR
CINS_0156 +140756 SLIIFDTSAININDFERICRHSPFFNFLRVYFLDLHCDYYEKYQDDILKINRQMQEHIKKIIYGFGNDSKDSLIGVQNFIHNIPNIVSCITFKELLKKRS +141053
CONCH_0163 +230 NQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKT--VF +329
N AIIVSTGPSLIKQLPLLKQY+N A+IFCADSAYPILAKYNIKPDYVLSLERV TSEFFNNDFGEF+KDIVF+L + H T +LN +T
CINS_0156 +140456 NARENAIIVSTGPSLIKQLPLLKQYSNKATIFCADSAYPILAKYNIKPDYVLSLERVDFTSEFFNNDFGEFDKDIVFVLKYLTHPNTFKYLNKKQTNITI +140753
CONCH_0163 +330 LQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
+ S ++ L FG +++ SVA+M Y L + L +NII IGQDLAYA+DG+SHPEEY+YGKYDTY+P++IDY L T AY G VKT TW LFK
CINS_0156 +140156 ISEYSPCINFIGLNDFGYIYTGSSVAVMGYMLAMHLKHQNIILIGQDLAYANDGASHPEEYHYGKYDTYDPKDIDYNLKTTAYGGKGEVKTTTTWNLFKI +140453
CONCH_0163 +430 MLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIND +529
LE I K NI TYN TEGGARI+ IEK FK+ C+ +L + +K F LEKLN +Q EL LK+FY I+++IK C L KECI + N + FL D
CINS_0156 +139856 QLEEAIFNVKQLCNITTYNATEGGARIEGAIEKSFKELCENILDKNFEKSFKNLEKLNHKRQIELKLKAFYNIYEIIKFCQDLEKECINIHNHISFLSSD +140153
CONCH_0163 +530 EKNFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQK +629
E+NF+ +IK+LD FK K EK + + +N QF+LNLARI+VLNPKTKED FNK LWI+EHLEW+ ++ HIK L+++LE + LE L+ L++
CINS_0156 +139556 EQNFTILIKKLDEFKTKIEKNSIIASITTSINIQFDLNLARIFVLNPKTKEDSFNKTLLWIQEHLEWITMLEEHIKTLRKTLEHSSLFLEENLKQHNLHR +139853
CONCH_0163 +630 QITKIKNTLL +639
QI KIK T L
CINS_0156 +139256 QIQKIKSTKL +139283
CONCH_0163 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factorScore: 1382.00 bits: 599.96 e-value: 0.000000
length: 612 gaps: 21 id: 343 positives: 417 coverage: 0.54 query coverage 0.54
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ IQGKD LDIN + +Y NTL EL+ L Y +KY LYPVLYFYGFGNGILYKALLQN+N + I+VFE +LE IY F+ +DFS+EL+ L+
CINS_1188 +1147862 FQIIQGKDNLDINLLNTQDNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALLQNQNHKHIIVFENDLELIYAMFQILDFSKELEEARLV +1148159
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQV +229
++D+N L+ D L +P FNF R YFL+L NYYEKYQ D+L++N L K I S GNS D LQGIE FVYN+P +ISN S+ ELL KRKN
CINS_1188 +1147562 IIDTNDLKRRDYDYLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSIFSHGNSPIDVLQGIEQFVYNIPSMISNPSYKELLNKRKNLS +1147859
CONCH_0163 +230 NTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKT--VFLQR +329
+TAIIVSTGPSLIKQLPLLKQY+ A+IFCADSAYPILAKYNIKPDYV LER+ T+EFFNNDFGEF+KDIVF+L VVH +L +T V +
CINS_1188 +1147262 DTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAEFFNNDFGEFDKDIVFVLKSVVHPNAFKYLEKKQTKIVVISE +1147559
CONCH_0163 +330 SSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYG---KYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
S F ++ L+ G +S PSVA MAY L NLN KNIIFIGQDLAYA++G SHP++Y + DTY + ID TLAY G + VKT WLLFK
CINS_1188 +1146962 NSHFINFIDLQNLGYAYSGPSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDYQNSATFESDTY--EHID----TLAYGGGYMVKTHFIWLLFKN +1147259
CONCH_0163 +430 MLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIND-- +529
+E IS + N ATYNCTEGGARI+ IEKPFK+ C+ LL++ + KPFAKL+ LN NKQ EL+LK++ KI Q IK C L K+ + LN ++ND
CINS_1188 +1146662 EMEKLISRNE-NCATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQNELLLKAYCKINQSIKKCVDLKKDFQKELDSLNKMMNDFL +1146959
CONCH_0163 +530 ----EKNFSSIIKELDHFKNK---FEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLEREL +629
E+ +I +D K K F+ +N L E+L P QFELNLARIYVLNPKTKED FNK LWIKEHLEW++LII HI + L KNI LE L
CINS_1188 +1146362 LSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTKEDSFNKSVLWIKEHLEWIQLIIAHINAQKLGLIKNIKQLECVL +1146659
CONCH_0163 +630 ENRHLQKQITKI +641
NR +K + KI
CINS_1188 +1146062 INRGFEKLVEKI +1146095
CONCH_0163 vs: Cla_0168 in RM2100; ATCC BAA-1060D (Campylobacter lari RM2100, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factorScore: 1505.00 bits: 653.02 e-value: 0.000000
length: 610 gaps: 11 id: 359 positives: 437 coverage: 0.56 query coverage 0.56
CONCH_0163 +30 FKTIQGKDPLDINFIHNG--GGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNS +129
F+ G DPLDINFI N LY +L +L+EKL LYNDKY LYPV YF+GFGNGILYKALLQNKN QKIVVFE ELEFIYLSFH+VDFS+EL +++
Cla_0168 +153650 FRVSIGSDPLDINFISNDKITKSKLYEHSLVQLNEKLNLYNDKYFLYPVFYFFGFGNGILYKALLQNKNHQKIVVFECELEFIYLSFHFVDFSKELNDDA +153947
CONCH_0163 +130 LIVLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKN +229
LI+LD L +D QIL +PFF FLR+YFLD+ C+YYEKY+ +IL N +Q+HIKQIIL GN S+DAL GIEN +YNL D+ISN+S +L+ KR+
Cla_0168 +153350 LIILDIKELNELDFQILCSNDPFFHFLRVYFLDIHCDYYEKYHDEILNTNENMQKHIKQIILLHGNDSKDALIGIENHLYNLYDLISNFSLSKLITKREK +153647
CONCH_0163 +230 QVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFL +329
AIIVSTGPSL KQLPLLKQYAN+ASIFCAD +YPILAK IKPDYV SLER+ +TSEFFNNDFG+F+KDI+FIL V H TI +L NN K +
Cla_0168 +153050 ACKNAIIVSTGPSLTKQLPLLKQYANHASIFCADGSYPILAKEGIKPDYVFSLERIEKTSEFFNNDFGKFDKDILFILMSVTHPNTIKYLKQNNRKFIIT +153347
CONCH_0163 +330 QRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGK-YDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQ +429
QR F ++L L G + PSVA MAYF+ + L +NIIFIGQDLAYA DGSSHP++Y+Y DTY I+ TLAY G ++KT E W +F+
Cla_0168 +152750 QRLLPFVKFLNLNSNGYISGCPSVANMAYFIAVLLKHENIIFIGQDLAYAKDGSSHPKDYHYSSTCDTYRRTHIN----TLAYGGKEQIKTHEVWNVFRV +153047
CONCH_0163 +430 MLEFFIS--SSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLIND +529
LE I+ NI TYN TEGGARI+ TIEKPFK+ C+ELL +E K FAKL + + K+ EL+LKSFYK++Q K+C+ L + L N++ FLIND
Cla_0168 +152450 ELEKKITFVRDNFNITTYNATEGGARIEGTIEKPFKELCEELLAKEALKNFAKLNETSKEKKIELLLKSFYKLYQASKICENLILKSSSLINKIHFLIND +152747
CONCH_0163 +530 EKNFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQK +629
E NFS II+E+D FKN EKI + EL PL QFELNLA+IYVL PKT+ED +NK LWIKEHLEW LI HIK L+E +EK + E L + +QK
Cla_0168 +152150 ENNFSKIIQEIDIFKNHIEKIKLIEELTLPLFVQFELNLAKIYVLHPKTQEDAYNKKLLWIKEHLEWFVLIENHIKILKEVIEKSFLKFENILVEKNMQK +152447
CONCH_0163 +630 QITKIKNTLL +639
I KI+N L
Cla_0168 +151850 YIHKIQNKKL +151877
CONCH_0163 vs: CSUB8521_0178 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factorScore: 1819.00 bits: 788.47 e-value: 0.000000
length: 608 gaps: 6 id: 415 positives: 488 coverage: 0.65 query coverage 0.65
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ +QG DPLDINFIHNGGGYTLYNN+L EL+EKL LYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELE IYLSFH +DFSEELKN +LI
CS..1_0178 +159978 FQILQGSDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALI +160275
CONCH_0163 +130 VLDSNSLQPIDI-QILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQ +229
+LD+ SL I+I L + PFFNFLR+YFLDL C+YYE+YQ+DILK N +Q++IKQ IL+ GNSSQDAL GIEN++YNLPDIISN+SF ELLLKRKN
CS..1_0178 +159678 ILDT-SLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNS +159975
CONCH_0163 +230 VNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQ +329
AIIVSTGPSLIKQLPLLKQYAN ASIFCADSAYPILAK++IKPDYVLSLERV ETSEFFNNDFG+F+KDI+F+L+ V+H TI++L N K +F+Q
CS..1_0178 +159378 SKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDFGKFDKDIIFVLTSVIHPNTITYLRKNRRKFMFVQ +159675
CONCH_0163 +330 RSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML +429
R +Y LK F L PSVA MAYF+ + L++K+IIFIGQDLAYA+DGSSHP+EY+YGKYDTYNPQEIDY L L+Y G + T TW++FK L
CS..1_0178 +159078 RLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTEL +159375
CONCH_0163 +430 EFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLINDEK +529
E +S +K ++I TYNCTEGGARI+ TIEKPFKQ C+ELL +E +K F KLEKLN KQ ELMLKSFYK + IK+C+ L KEC ++SN L FL NDE
CS..1_0178 +158778 EKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLEKECAFISNTLHFLSNDEN +159075
CONCH_0163 +530 NFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQI +629
NF II++LD FK K L +++ LNTQFELNLARIYVLNPK KED FNK LWIKEHLEW+ ++ H K L+ +LEKNIINLE+ELEN+ L++ I
CS..1_0178 +158478 NFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYI +158775
CONCH_0163 +630 TKIKNTLL +637
KIK L
CS..1_0178 +158178 QKIKKVKL +158199
CONCH_0163 vs: CSUB8521_0235 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1926bp / 642aa PV: Yes
Function: putative motility accessory factorScore: 1886.00 bits: 817.37 e-value: 0.000000
length: 609 gaps: 9 id: 429 positives: 493 coverage: 0.67 query coverage 0.67
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ +QG DPLDINFIHNGGGYTLYNN+L EL+EKL LYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELE IYLSFH +DFSEELKN +LI
CS..1_0235 +207217 FQILQGNDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALI +207514
CONCH_0163 +130 VLDSNSLQPIDIQI---LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRK +229
+LD+ +DI I L + PFFNFLR+YFLDL C+YYE+YQ+DIL N +Q++IKQ ILS GNSSQDAL GIEN++YNLPDIISN+SF ELLLKRK
CS..1_0235 +206917 ILDTSL---VDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRK +207214
CONCH_0163 +230 NQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFLNNYKTVFLQ +329
N AIIVSTGPSLIKQLPLLKQYAN ASIFCADSAYPILAK++IKPDYVLSLERV TSEFFNNDFG+F+KDIVF+L +VH T +L + +
CS..1_0235 +206617 NSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEFFNNDFGDFDKDIVFVLKSLVHPSTFKYLKKTQQPHIG +206914
CONCH_0163 +330 RSSG---FTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFK +429
S F YL+LK FG + SVA MAY L L L KNIIFIGQDLAYA DGSSHP+EY+YGKYDTYNPQEIDYSLT + Y G H+VKT ETW+LFK
CS..1_0235 +206317 TISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFK +206614
CONCH_0163 +430 QMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLINDE +529
LE I SK +TYN TEGGARI+ TIEKPFKQ C+ELLT+++KKPF KLEKLN+NKQKELMLK+FYK+H+VIK+C+ L KEC+++ N LNFL NDE
CS..1_0235 +206017 TQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEELLTKKLKKPFVKLEKLNQNKQKELMLKAFYKVHKVIKICNILEKECLHIYNTLNFLSNDE +206314
CONCH_0163 +530 KNFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQ +629
NF II++LDHFK K EKI L EL++PLNTQFELNLARIYVLNPKTKED FNK LWIKEHLEW+ ++ H K L+ +LEKNIINL +ELEN+ L++
CS..1_0235 +205717 TNFKKIIEQLDHFKSKIEKILILKELIDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQY +206014
CONCH_0163 +630 ITKIKNTLL +638
I KIK L
CS..1_0235 +205417 IQKIKKVKL +205441
CONCH_0163 vs: CSUB8523_1511 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1923bp / 641aa PV: Yes
Function: putative motility accessory factorScore: 1239.00 bits: 538.28 e-value: 0.000000
length: 617 gaps: 22 id: 324 positives: 419 coverage: 0.51 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
++ +QG D LDIN I +GGGY LY+ L EL++ L LYNDKYLLYPVL+FYGFGNGILYKALLQN N + I+VFE ++ IY F +DFS+ELK N L+
CS..3_1511 +1479953 YQIVQGDDNLDINII-DGGGYRLYDKPLEELNKTLNLYNDKYLLYPVLFFYGFGNGILYKALLQNLNHKIILVFEPDVNIIYTMFKMIDFSKELKENRLL +1480250
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYE-KYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQ +229
+LD N D++ LF N FNFLR YFL++ C+YY+ KYQ++ILKLN+ +Q+ IK+ I+S G+ D LQGI+ F+ N+P +I+N S+ ELL KRKN
CS..3_1511 +1479653 LLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDDKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIANPSYKELLNKRKNL +1479950
CONCH_0163 +230 VNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQ +329
TAIIVSTGPSL KQL LLKQY N ASIFCADSAYPILAK NIKPDYV SLER TSEFFN DFGEF+KDI+F++ V H TI +L N K + +
CS..3_1511 +1479353 SETAIIVSTGPSLTKQLSLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNHDFGEFDKDILFVIKSVTHPNTIKYLEKNKRKYMIVS +1479650
CONCH_0163 +330 RSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY-YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQM +429
F +Y SL FG SVA MA +L++ L NIIFIGQDLAY D G SHP++Y ++T + ID L Y G +VKT +TW+ FK++
CS..3_1511 +1479053 TPEYFFKYCSLNDFGYFNMGWSVAHMACYLSVHLKHSNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHID----VLGYGGIGYVKTHKTWIFFKKI +1479350
CONCH_0163 +430 LE-FFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKE-C---IYLSNRLNFLI +529
LE ++ K+NI YNCTEGGARI+ TIE+PFKQ C++LL +++ KPF KLE LN NKQ EL+LK+++KI + I+ + L KE C I + L +
CS..3_1511 +1478753 LENDILTFNKMNIKIYNCTEGGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSIRQYENLKKELCERNISINKNLLHID +1479050
CONCH_0163 +530 N-DEKN----FSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLEREL +629
N D +N F I+K++D K + LN PL QFELNLARIYVLNPKT+ED +NK LWIKEHL+W++LII HI +E L++ ++ + EL
CS..3_1511 +1478453 NLDIQNSIHMFEFILKQIDAIKTSIYRCGLLN---GPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSVVTTKDEL +1478750
CONCH_0163 +630 ENRHLQKQITKIKNTLL +646
+ + KI+ L
CS..3_1511 +1478153 IEKGFLNLVEKIEQRTL +1478201
CONCH_0163 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factorScore: 1821.00 bits: 789.33 e-value: 0.000000
length: 608 gaps: 6 id: 416 positives: 488 coverage: 0.65 query coverage 0.65
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
F+ +QG DPLDINFIHNGGGYTLYNN+L EL+EKL LYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELE IYLSFH +DFSEELKN +LI
CS..3_0172 +155366 FQILQGNDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALI +155663
CONCH_0163 +130 VLDSNSLQPIDI-QILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQ +229
+LD+ SL I+I L + PFFNFLR+YFLDL C+YYE+YQ+DILK N +Q++IKQ IL+ GNSSQDAL GIEN++YNLPDIISN+SF ELLLKRKN
CS..3_0172 +155066 ILDT-SLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNS +155363
CONCH_0163 +230 VNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQ +329
AIIVSTGPSLIKQLPLLKQYAN ASIFCADSAYPILAK++IKPDYVLSLERV ETSEFFNNDFG+F+KDIVF+L+ V+H TI++L N K +F+Q
CS..3_0172 +154766 SKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDFGDFDKDIVFVLTSVIHPNTITYLRKNRRKFMFVQ +155063
CONCH_0163 +330 RSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQML +429
R +Y LK F L PSVA MAYF+ + L++K+IIFIGQDLAYA+DGSSHP+EY+YGKYDTYNPQEIDY L L+Y G + T TW++FK L
CS..3_0172 +154466 RLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTEL +154763
CONCH_0163 +430 EFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLINDEK +529
E +S +K ++I TYNCTEGGARI+ TIEKPFKQ C+ELL +E +K F KLEKLN KQ ELMLKSFYK + IK+C+ L KEC ++SN L FL NDE
CS..3_0172 +154166 EKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLEKECAFISNTLHFLSNDEN +154463
CONCH_0163 +530 NFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQI +629
NF II++LD FK K L +++ LNTQFELNLARIYVLNPK KED FNK LWIKEHLEW+ ++ H K L+ +LEKNIINLE+ELEN+ L++ I
CS..3_0172 +153866 NFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYI +154163
CONCH_0163 +630 TKIKNTLL +637
KIK L
CS..3_0172 +153566 QKIKKVKL +153587
CONCH_0163 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factorScore: 1791.00 bits: 776.39 e-value: 0.000000
length: 607 gaps: 4 id: 408 positives: 479 coverage: 0.63 query coverage 0.64
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
FK I G D LDINFIHNGGGY LY + L +L+EKL LYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHY+DFSEELKN +LI
CVOL_0220 +187881 FKVIVGNDALDINFIHNGGGYRLYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYIDFSEELKNGALI +188178
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQV +229
VLD+N + + PFFNFLR+YFLD+ C+YYEKYQ+DIL N+ +Q HIK+ I GN SQD+L GIENF+YNLP IISNYSF +L LKRK
CVOL_0220 +187581 VLDTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLHIKRSIYRYGNDSQDSLMGIENFIYNLPKIISNYSFKQLCLKRKKLS +187878
CONCH_0163 +230 NTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQR +329
+ AIIVSTGPSLIKQLPLLKQY NYASIFCADSAYPILAK IKPDYVLSLERV ETSEFFNNDF E +KD++F+L + H T +L NN K +
CVOL_0220 +187281 DMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERVKETSEFFNNDFKELDKDVLFVLKSLTHPNTFQYLNANNRKIIPATY +187578
CONCH_0163 +330 SSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLE +429
+ FT ++ L FG + SVA MAYFL L L KNIIFIGQDLAYA DGSSHP+EYYYG+YDTY+P++I Y LTT+AY G V TNE W+LFK +E
CVOL_0220 +186981 YTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGSSHPKEYYYGQYDTYDPKDISYHLTTIAYGGQDKVFTNEIWMLFKTQIE +187278
CONCH_0163 +430 --FFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECIYLSNRLNFLINDEKN +529
F + + +N TYNCTEGGARI TIEKPFKQ C++LLT+++ KPF KLEKLN+NKQKELMLK+FYK+++ IK+C++L KEC++L N L FL NDEKN
CVOL_0220 +186681 EAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKLEKLNQNKQKELMLKAFYKVYKAIKICNTLEKECLHLYNTLIFLSNDEKN +186978
CONCH_0163 +530 FSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQIT +629
F +I++LD+FK K EKI L EL+NPLNTQFELNLARIYVLNPKTKED FNK LWIKEHLEW+ ++ HIK L+ +LEKNIINLE+ELEN+ L++ +
CVOL_0220 +186381 FKNVIEQLDYFKSKIEKILILKELINPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLKDHIKALKITLEKNIINLEKELENQNLHQYVQ +186678
CONCH_0163 +630 KIKNTLL +636
KIK L
CVOL_0220 +186081 KIKKVKL +186099
CONCH_0163 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factorScore: 1231.00 bits: 534.83 e-value: 0.000000
length: 610 gaps: 17 id: 321 positives: 404 coverage: 0.51 query coverage 0.50
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
+K IQG D LDIN + +Y N L EL+ LK+YN+KY LYPVLYFYGFGNGILYKALLQNK + I+VFEK+LE I+ F +DFS+EL+ L+
CVOL_1306 +1273449 YKIIQGNDNLDINLLNTQDNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIVFEKDLEIIHTMFSIIDFSKELQEFRLV +1273746
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQV +229
+ D+N L +D +I+ P NF R YFL+L NYYE+Y+ DIL++NT + E++K+ +L GN DALQGIE F +NLP +IS ++ ELL KRKN
CVOL_1306 +1273749 IADTNCLNILDYEIMCRQQPMLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGIEQFTHNLPKMISCPTYKELLRKRKNSN +1274046
CONCH_0163 +230 NTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQR +329
+TAIIVSTGPSL KQL LLK+YAN A+IFCADSAYPILAKYNIKPDYVLSLERV TSEFFNNDFG+F+KDI+FIL ++K TI +L NN K + +
CVOL_1306 +1274049 DTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDIIFILKSYIYKNTIKYLEKNNRKYMLISS +1274346
CONCH_0163 +330 SSG-FTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNPQEI---DYS-LTTLAYNGNHHVKTNETWLLF +429
+ F + L +G L + SVA M L L KNII IGQDLAY++DG SH EY Y D Y +I DY +AY G V++ W LF
CVOL_1306 +1274349 TDAKFIFFTQLHNYGYLATGCSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTYLT-DAYKDNKIYKRDYGKYECIAYGGEGKVQSSFVWTLF +1274646
CONCH_0163 +430 KQMLEFFISSSK-VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKECI-YLSNRLN--- +529
+Q E I+ K + YNCTEGGARI IEKPFK+ C++LL ++ +K FA LE L NKQ ELMLK++ KI + I C L K YLSN LN
CVOL_1306 +1274649 RQTFESDIALFKHYDTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLKAYTKIKKSIVHCQELTKTFQEYLSN-LNENC +1274946
CONCH_0163 +530 FLINDEKNFSSIIKELDHFKNKFEK---INFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERE +629
I +K+ II +D K + E IN L E+LNPL QFELNLARIYVLNP ++D++NK LWIKEH+ WLELII HIK +++L NII L+
CVOL_1306 +1274949 QNICSQKDLNYIINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNKSLLWIKEHISWLELIIAHIKAQEKALNDNIIPLKEA +1275246
CONCH_0163 +630 LENRHLQKQI +639
+ R + +I
CVOL_1306 +1275249 IIQRGYKHKI +1275276
CONCH_0163 vs: CVOL_1208 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation dataScore: 775.00 bits: 338.12 e-value: 0.000000
length: 330 gaps: 4 id: 191 positives: 237 coverage: 0.51 query coverage 0.51
CONCH_0163 +30 FKTIQGKDPLDINFIHNGGGYTLYNNTLNeldeklklyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLI +129
++ IQG D LDIN I +GGGY LY+ L EL++ L LYNDKYLLYP L+FYGFGNGILYKALLQN N + I+VFE ++ IY F +DFS+ELK N L+
CVOL_1208 +1175761 YQIIQGNDNLDINII-DGGGYKLYDKPLEELNKTLNLYNDKYLLYPALFFYGFGNGILYKALLQNPNHKIILVFEPDVNIIYTMFKVIDFSQELKENRLL +1176058
CONCH_0163 +130 VLDSNSLQPIDIQILFFSNPFFNFLRIYFLDLNCNYYE-KYQKDILKLNTKLQEHIKQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQ +229
+LD N D++ LF N FNFLR YFL++ C+YY+ KYQ++ILKLN+ +Q+ IK+ I+S G+ D LQGI+ F+ N+P +I+ S+ ELL KRKN
CVOL_1208 +1175461 LLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDGKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIAHPSYKELLNKRKNL +1175758
CONCH_0163 +230 VNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQ +329
+TAIIVSTGPSL KQLPLLKQY N ASIFCADSAYPILAK NIKPDYV SLER TSEFFNNDFGEF+KDI+F++ V H TI +L N K + +
CVOL_1208 +1175161 SDTAIIVSTGPSLTKQLPLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNNDFGEFDKDILFVIKSVTHPNTIKYLEKNKRKYMIVS +1175458
CONCH_0163 +330 RSSGFTRYLSLKKFGNLHSSPSVAIMAYFL +359
F +Y SL FG SVA + F+
CVOL_1208 +1174861 TPEYFFKYCSLNDFGYFNMGWSVAHILLFI +1174948
Score: 471.00 bits: 206.99 e-value: 0.000000
length: 296 gaps: 18 id: 135 positives: 187 coverage: 0.51 query coverage 0.51
CONCH_0163 +348 SVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY-YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLE-FFISSSKVNIATYNCTEG +447
V ++ +L++ L NIIFIGQDLAY D G SHP++Y ++T + ID L Y G HVKT +TW+ FK++LE ++ K+NI YNCTEG
CVOL_1208 +1174803 GVLPISCYLSVHLKHGNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHID----VLGYGGIGHVKTHKTWIFFKKILENDILTFNKMNIKIYNCTEG +1175100
CONCH_0163 +448 GARIDHTIEKPFKQTCKELLTEEIKKPFAkleklnenkqkelmlkSFYKIHQVIKLCDSLHKE-C---IYLSNRLNFLIN-DEKN----FSSIIKELDHF +547
GARI+ TIE+PFKQ C++LL +++ KPF KLE LN NKQ EL+LK+++KI + ++ + L KE C I + L + N D +N F I+K++D
CVOL_1208 +1174503 GARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSVRQYENLKKELCERNISINKNLLHIDNLDIQNSIHIFELILKQIDEI +1174800
CONCH_0163 +548 KNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIKNTLL +643
K + LN PL QFELNLARIYVLNPKT+ED +NK LWIKEHL+W++LII HI +E L++ I+ + EL + + KI+ L
CVOL_1208 +1174203 KTSIYRCGLLN---GPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSIVTTKDELIEKGFLNLVEKIEQRAL +1174488