CjjRM3196_1337 vs: Cj1318 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 1792.00 bits: 776.82 e-value: 0.000000
length: 661 gaps: 15 id: 421 positives: 505 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
Cj1318 +1246678 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1246975

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+++ + L D + L + F QFSRIYFLEL+S YYER+ +++LELN +
Cj1318 +1246978 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1247275

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
Cj1318 +1247278 KNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1247575

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
Cj1318 +1247578 LTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1247875

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
Cj1318 +1247878 PDDYQNSANYES--QMYEHILTE-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1248175

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++N I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PL QFELNLARIYVL
Cj1318 +1248178 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVL +1248475

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
Cj1318 +1248478 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1248658

CjjRM3196_1337 vs: Cj1333 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: PseD protein

Score: 1817.00 bits: 787.61 e-value: 0.000000
length: 663 gaps: 19 id: 415 positives: 502 coverage: 0.63 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
Cj1333 +1259689 MTFTPTQKELFNKNIEALSNLFLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1259986

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDL-SNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsi +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ S ++I D +L SN + F QFSRIYFLEL+S YYER+ +++LELN ++
Cj1333 +1259989 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQ-SARLMILQTSSLDIELFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQD +1260286

Cj..6_1337 +201 ikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH+IKPDYV LER
Cj1333 +1260289 FKDSILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERI +1260586

Cj..6_1337 +301 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +400
+ S+ F+NDF EFDK ILF+L S VH ++L++NNR +MLV F YL L F + SVA MN+ LA L HKNI+ IGQDLAY+KD S
Cj1333 +1260589 PLTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLS +1260886

Cj..6_1337 +401 HAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKN--FINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNP +500
H KD+ HEGHFQ+D+N +T+ AYG GKVESS+ W LFR FE ++ K +I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL P
Cj1333 +1260889 HTKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEP +1261186

Cj..6_1337 +501 LNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIY +600
L +NKQNE +LK Y K+Y+SI HC+DF K ++ Y++IK +++L+N Q E + L+ II+ ID +K QID+ N Q DL +ILGPLL QFELNLARIY
Cj1333 +1261189 LSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQ--ENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIY +1261486

Cj..6_1337 +601 VLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +663
VLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
Cj1333 +1261489 VLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1261675

CjjRM3196_1337 vs: Cj1335 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1948bp / 649aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 135.00 bits: 62.05 e-value: 0.000000
length: 59 gaps: 0 id: 49 positives: 52 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj1335 +1263507 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1263681

Score: 1720.00 bits: 745.76 e-value: 0.000000
length: 604 gaps: 15 id: 374 positives: 455 coverage: 0.65 query coverage 0.64

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+++ + L D +
Cj1335 +1263676 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTE +1263973

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
L + F QFSRIYFLEL+S YYER+ +++LELN + K I+R GNDP D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSL
Cj1335 +1263976 LC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSL +1264273

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER ++ ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL
Cj1335 +1264276 TKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKD +1264573

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNF +457
+ G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T AYGG GKVE+ W LF+ FE + K
Cj1335 +1264576 FSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILTE-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMG +1264873

Cj..6_1337 +458 INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +557
I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DF K L ++N I+ +YL L + + LN
Cj1335 +1264876 ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLN +1265173

Cj..6_1337 +558 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +657
I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++
Cj1335 +1265176 LAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWM +1265473

Cj..6_1337 +658 ERIK +661
ER++
Cj1335 +1265476 ERVR +1265485

CjjRM3196_1337 vs: CJJ81176_1336 in 81-176 (Campylobacter jejuni subsp. jejuni 81-176, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD

Score: 2698.00 bits: 1167.64 e-value: 0.000000
length: 663 gaps: 9 id: 592 positives: 619 coverage: 0.90 query coverage 0.89

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN NQ +LFN+NI AL+N LKESLKEIKSSKF+LILGKDNLDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
CJ..6_1336 +1249415 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDNLDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1249712

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK NLIIINTNIL +FDL N YKK N IFLQFSRIYFLELISNYYERYN+EIL+LN+TILS I
CJ..6_1336 +1249715 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1250012

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
KISII+YGND +DNLMG+KHFIYNL KL THP+SE+FL+KR KLSDTAIIVSTGPSLTKQLPLLK+YANKATIFCADSAYPILAKH+IKPDYVCMLERDD
CJ..6_1336 +1250015 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1250312

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNL KYFQPIDG+VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH
CJ..6_1336 +1250315 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1250612

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
AKDFIHEKLHEGHFQKDENLFTS AYGGKG+VESSYFW LFRE+FE WIS+D NFINIYNCTEGGARI+GTIEKPFLWACENLL KDLNKPFPKLNPLNI
CJ..6_1336 +1250615 AKDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNI +1250912

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNELMLK YNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQI ESKELLNFIIQKID +KYQIDDAKNMQDLYEILGPLL+QFELNLARIYVLNP
CJ..6_1336 +1250915 NKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNP +1251212

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +663
KT EDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL RIKNANK
CJ..6_1336 +1251215 KTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK +1251401

CjjRM3196_1337 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 1853.00 bits: 803.14 e-value: 0.000000
length: 661 gaps: 16 id: 423 positives: 507 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
A911_06490 +1262965 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1263262

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
A911_06490 +1263265 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1263562

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
A911_06490 +1263565 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1263862

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+FI A VVH + IE+L+ +R ++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
A911_06490 +1263865 ITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1264162

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
A911_06490 +1264165 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1264462

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
A911_06490 +1264465 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1264762

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
A911_06490 +1264765 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1264945

CjjRM3196_1337 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1713.00 bits: 742.75 e-value: 0.000000
length: 662 gaps: 20 id: 397 positives: 488 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
A911_06480 +1259156 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1259453

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
A911_06480 +1259456 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1259753

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER
A911_06480 +1259756 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKA +1260053

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
A911_06480 +1260056 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1260353

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
A911_06480 +1260356 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1260653

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
A911_06480 +1260656 SLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYV +1260953

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
A911_06480 +1260956 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1261139

CjjRM3196_1337 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 1866.00 bits: 808.75 e-value: 0.000000
length: 659 gaps: 14 id: 425 positives: 512 coverage: 0.66 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ16_07340 +1354370 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1354667

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + LI++NTN L D L + F QFSRIYFLEL+S YYER+ +++LELN +
PJ16_07340 +1354670 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1354967

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ16_07340 +1354970 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1355267

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ ++ F+ DF EFDK I+FI A VVH + IE+L+ NR+Y+++PR F Y+ L KYF + SVAHM Y L+ L HKNIIFIGQDLAY+++ SH
PJ16_07340 +1355270 LTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKL-KYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSH +1355567

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E Q E + T AYGGK ++++ FW F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
PJ16_07340 +1355570 PDDYQNSANYES--QMYEHILTE-AYGGKKEIKTHEFWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1355867

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVLNP
PJ16_07340 +1355870 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSL-----NEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNP +1356167

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ16_07340 +1356170 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1356344

CjjRM3196_1337 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1723.00 bits: 747.06 e-value: 0.000000
length: 662 gaps: 20 id: 400 positives: 492 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
PJ16_07410 +1367385 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1367682

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN ++
PJ16_07410 +1367685 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1367982

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ16_07410 +1367985 KDSIISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1368282

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
PJ16_07410 +1368285 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1368582

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F++ E I + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ16_07410 +1368585 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1368882

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
PJ16_07410 +1368885 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1369182

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ16_07410 +1369185 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1369368

CjjRM3196_1337 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1896.00 bits: 821.69 e-value: 0.000000
length: 660 gaps: 12 id: 432 positives: 512 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ16_07420 +1371194 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1371491

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++NTN L D L + F QFSRIYFLEL+S YYER+ +++LELN +
PJ16_07420 +1371494 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1371791

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYV LER
PJ16_07420 +1371794 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIP +1372091

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK +LF+ S ++ + I++L++NNR ++L R F +NL Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
PJ16_07420 +1372094 LTSEFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1372391

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHF++D+ F AYGG GKVESS W +FR + IS KN + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ16_07420 +1372394 TKDYKNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1372691

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVLN
PJ16_07420 +1372694 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLN +1372991

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ16_07420 +1372994 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1373171

CjjRM3196_1337 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1830.00 bits: 793.22 e-value: 0.000000
length: 661 gaps: 16 id: 418 positives: 505 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ17_06980 +1346475 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1346772

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
PJ17_06980 +1346775 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1347072

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ17_06980 +1347075 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1347372

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ ++ F+ DF EFDK I+F+ A VVH + IE+L+ + +++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
PJ17_06980 +1347375 LTAEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLK--GKTFIITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1347672

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ17_06980 +1347675 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1347972

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++N I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PL QFELNLARIYVL
PJ17_06980 +1347975 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVL +1348272

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++E+++
PJ17_06980 +1348275 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMEKVR +1348455

CjjRM3196_1337 vs: PJ17_07050 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 1818.00 bits: 788.04 e-value: 0.000000
length: 662 gaps: 17 id: 416 positives: 503 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI +L N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
PJ17_07050 +1359494 MIFTPTQKELFNKNIESLSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1359791

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++NTN D L + F QFSRIYFLEL+S YYER+ +++LELN ++
PJ17_07050 +1359794 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKPEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDF +1360091

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH+IKPDYV LER
PJ17_07050 +1360094 KDSILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIP +1360391

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK ILF+L S VH ++L++NNR +MLV F YL L F + SVA MN+ LA L HKNI+ IGQDLAY+KD SH
PJ17_07050 +1360394 LTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSH +1360691

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKN--FINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
KD+ HEGHFQ+D+N +T+ AYG GKVESS+ W LFR FE ++ K +I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ17_07050 +1360694 TKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1360991

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DF K ++ Y++IK +++L+N Q E + L+ II+ ID +K QID+ N Q DL +ILGPLL QFELNLARIYV
PJ17_07050 +1360994 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQ--ENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYV +1361291

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ17_07050 +1361294 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1361477

CjjRM3196_1337 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 1842.00 bits: 798.39 e-value: 0.000000
length: 659 gaps: 14 id: 418 positives: 508 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ17_07060 +1363312 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1363609

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHIL+FS ELQ + L+++ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
PJ17_07060 +1363612 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILNFSSELQSARLMVLENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1363909

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ17_07060 +1363912 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1364209

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ ++ F+ DF EFDK I+F+ A VVH + IE+L+ NR+Y+++PR F Y+ L KYF + SVAHM +L+ LSHKNIIFIGQDLAY+++ SH
PJ17_07060 +1364212 LTAEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKL-KYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSH +1364509

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E Q E + T AYGGK ++++ W F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
PJ17_07060 +1364512 PDDYQNSANYES--QMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1364809

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+Y+SI HC+DF K L ++N I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLNP
PJ17_07060 +1364812 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNP +1365109

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ17_07060 +1365112 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1365286

CjjRM3196_1337 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1713.00 bits: 742.75 e-value: 0.000000
length: 662 gaps: 20 id: 397 positives: 488 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N135_01421 +1337388 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1337685

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
N135_01421 +1337688 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1337985

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER
N135_01421 +1337988 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKA +1338285

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
N135_01421 +1338288 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1338585

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N135_01421 +1338588 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1338885

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
N135_01421 +1338888 SLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYV +1339185

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N135_01421 +1339188 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1339371

CjjRM3196_1337 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1853.00 bits: 803.14 e-value: 0.000000
length: 661 gaps: 16 id: 423 positives: 507 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N135_01423 +1341197 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1341494

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
N135_01423 +1341497 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1341794

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
N135_01423 +1341797 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1342094

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+FI A VVH + IE+L+ +R ++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
N135_01423 +1342097 ITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1342394

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N135_01423 +1342397 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1342694

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
N135_01423 +1342697 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1342994

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N135_01423 +1342997 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1343177

CjjRM3196_1337 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1713.00 bits: 742.75 e-value: 0.000000
length: 662 gaps: 20 id: 397 positives: 488 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N564_02285 +1299219 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1299516

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
N564_02285 +1299519 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1299816

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER
N564_02285 +1299819 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKA +1300116

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
N564_02285 +1300119 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1300416

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N564_02285 +1300419 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1300716

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
N564_02285 +1300719 SLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYV +1301016

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N564_02285 +1301019 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1301202

CjjRM3196_1337 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1853.00 bits: 803.14 e-value: 0.000000
length: 661 gaps: 16 id: 423 positives: 507 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N564_02295 +1303028 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1303325

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
N564_02295 +1303328 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1303625

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
N564_02295 +1303628 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1303925

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+FI A VVH + IE+L+ +R ++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
N564_02295 +1303928 ITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1304225

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N564_02295 +1304228 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1304525

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
N564_02295 +1304528 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1304825

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N564_02295 +1304828 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1305008

CjjRM3196_1337 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1853.00 bits: 803.14 e-value: 0.000000
length: 661 gaps: 16 id: 423 positives: 507 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N565_02385 +1341584 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1341881

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
N565_02385 +1341884 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1342181

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
N565_02385 +1342184 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1342481

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+FI A VVH + IE+L+ +R ++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
N565_02385 +1342484 ITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1342781

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N565_02385 +1342784 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1343081

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
N565_02385 +1343084 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1343381

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N565_02385 +1343384 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1343564

CjjRM3196_1337 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1713.00 bits: 742.75 e-value: 0.000000
length: 662 gaps: 20 id: 397 positives: 488 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N565_02375 +1337775 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1338072

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
N565_02375 +1338075 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1338372

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER
N565_02375 +1338375 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKA +1338672

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
N565_02375 +1338675 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1338972

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N565_02375 +1338975 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1339272

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
N565_02375 +1339275 SLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYV +1339572

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N565_02375 +1339575 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1339758

CjjRM3196_1337 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1853.00 bits: 803.14 e-value: 0.000000
length: 661 gaps: 16 id: 423 positives: 507 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N755_02445 +1341567 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1341864

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
N755_02445 +1341867 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1342164

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
N755_02445 +1342167 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1342464

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+FI A VVH + IE+L+ +R ++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
N755_02445 +1342467 ITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1342764

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N755_02445 +1342767 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1343064

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
N755_02445 +1343067 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1343364

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N755_02445 +1343367 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1343547

CjjRM3196_1337 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1713.00 bits: 742.75 e-value: 0.000000
length: 662 gaps: 20 id: 397 positives: 488 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N755_02435 +1337758 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1338055

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
N755_02435 +1338058 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1338355

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER
N755_02435 +1338358 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKA +1338655

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
N755_02435 +1338658 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1338955

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N755_02435 +1338958 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1339255

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
N755_02435 +1339258 SLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYV +1339555

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N755_02435 +1339558 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1339741

CjjRM3196_1337 vs: PJ18_06860 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1816.00 bits: 787.18 e-value: 0.000000
length: 661 gaps: 16 id: 419 positives: 504 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ18_06860 +1302529 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1302826

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
PJ18_06860 +1302829 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1303126

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ18_06860 +1303129 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1303426

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF+EFD+ I+FI A VVH + IE+L+ R ++ + YY+NL + G SVAHM +LA +L HKNIIFIGQDLAY+++ SH
PJ18_06860 +1303429 ITAEFFNHDFREFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGF-SVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSH +1303726

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYD--KNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYG K +V++ W LF+ FE I + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ18_06860 +1303729 PDDYQNSANYES--QMYEHILTK-AYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1304026

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVL
PJ18_06860 +1304029 SLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVL +1304326

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ18_06860 +1304329 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1304509

CjjRM3196_1337 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1732.00 bits: 750.94 e-value: 0.000000
length: 662 gaps: 20 id: 401 positives: 490 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
PJ18_06850 +1298720 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1299017

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ S L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
PJ18_06850 +1299020 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1299317

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ18_06850 +1299320 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1299617

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF+EFDK I FI+ SVVH I +L + + LV F YL L +F + SVAHM +L+ L HKNIIFIGQDLAY+K+ SH
PJ18_06850 +1299620 ITAEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKL-DHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSH +1299917

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E K + AYGGKG+V++ + W +F++ E I + +++ +YNCTEGGARI+G IEKPFLWACENLL+KDLNKPF KL PL
PJ18_06850 +1299920 PDDYQNSATYES---KAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPL +1300217

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
PJ18_06850 +1300220 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1300517

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ18_06850 +1300520 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1300703

CjjRM3196_1337 vs: PJ18_06785 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1883.00 bits: 816.08 e-value: 0.000000
length: 660 gaps: 12 id: 428 positives: 509 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ18_06785 +1284798 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1285095

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
PJ18_06785 +1285098 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1285395

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYV LER
PJ18_06785 +1285398 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIP +1285695

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+ DF EFD+ +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
PJ18_06785 +1285698 LTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1285995

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ18_06785 +1285998 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1286295

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVLN
PJ18_06785 +1286298 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLN +1286595

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ18_06785 +1286598 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1286775

CjjRM3196_1337 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 1866.00 bits: 808.75 e-value: 0.000000
length: 659 gaps: 14 id: 425 positives: 512 coverage: 0.66 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F + Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ19_07340 +1352981 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1353278

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + LI++NTN L D L + F QFSRIYFLEL+S YYER+ +++LELN +
PJ19_07340 +1353281 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1353578

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ19_07340 +1353581 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1353878

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ ++ F+ DF EFDK I+FI A VVH + IE+L+ NR+Y+++PR F Y+ L KYF + SVAHM Y L+ L HKNIIFIGQDLAY+++ SH
PJ19_07340 +1353881 LTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKL-KYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSH +1354178

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E Q E + T AYGGK ++++ FW F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
PJ19_07340 +1354181 PDDYQNSANYES--QMYEHILTE-AYGGKKEIKTHEFWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1354478

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVLNP
PJ19_07340 +1354481 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSL-----NEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNP +1354778

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ19_07340 +1354781 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1354955

CjjRM3196_1337 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1896.00 bits: 821.69 e-value: 0.000000
length: 660 gaps: 12 id: 432 positives: 512 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ19_07420 +1369805 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1370102

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++NTN L D L + F QFSRIYFLEL+S YYER+ +++LELN +
PJ19_07420 +1370105 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1370402

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYV LER
PJ19_07420 +1370405 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIP +1370702

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK +LF+ S ++ + I++L++NNR ++L R F +NL Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
PJ19_07420 +1370705 LTSEFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1371002

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHF++D+ F AYGG GKVESS W +FR + IS KN + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ19_07420 +1371005 TKDYKNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1371302

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVLN
PJ19_07420 +1371305 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLN +1371602

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ19_07420 +1371605 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1371782

CjjRM3196_1337 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1723.00 bits: 747.06 e-value: 0.000000
length: 662 gaps: 20 id: 400 positives: 492 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
PJ19_07410 +1365996 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1366293

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN ++
PJ19_07410 +1366296 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1366593

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
PJ19_07410 +1366596 KDSIISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1366893

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
PJ19_07410 +1366896 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1367193

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F++ E I + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
PJ19_07410 +1367196 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1367493

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
PJ19_07410 +1367496 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1367793

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
PJ19_07410 +1367796 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1367979

CjjRM3196_1337 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor

Score: 1802.00 bits: 781.14 e-value: 0.000000
length: 662 gaps: 17 id: 418 positives: 495 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGI
JJ..7_0374 +331842 MTFIPTQKELFNKNIEALSNVFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGI +332139

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++L++N +
JJ..7_0374 +331542 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETF +331839

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+ +GND D L G+++F+YNLP + THP E L KR LSDTAIIVSTGPSLTKQLPLLKKYA KAT+FCADSAYPILAK+ I+PDYV LER
JJ..7_0374 +331242 KKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVL +331539

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
S+ F+NDFKEFDK ILF+L S H ++L++NNR +MLV +F YL L + G SVA M Y LA L +KNII IGQDLAYSKD SSH
JJ..7_0374 +330942 ETSEFFNNDFKEFDKDILFVLKSYAHPHTTKYLQKNNRNFMLVSTYANFINYLKLDDFGYFTMGF-SVANMAYHLALLLQYKNIILIGQDLAYSKDGSSH +331239

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENL---FTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNP +500
+ I L +G +K E + +TAYGG+G V + WNLFR +FE I+ I YNCTEGGARIEG IEKPFLWACENLL+KDLNKPF KL P
JJ..7_0374 +330642 PDEHIFGTL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRSIFEQDIT--NYHIPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEP +330939

Cj..6_1337 +501 LNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYV +600
L + KQNE +LK Y K+ +SI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D K MQDLYEILGPLL QFELNLARIYV
JJ..7_0374 +330342 LSLKKQNEFLLKAYYKVCQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYV +330639

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K +ER++
JJ..7_0374 +330042 LNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVR +330225

CjjRM3196_1337 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factor

Score: 1660.00 bits: 719.88 e-value: 0.000000
length: 662 gaps: 22 id: 392 positives: 487 coverage: 0.60 query coverage 0.59

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q + LFN+NI AL N LKESLK+IKSSKFELILGKD LDINLK+TS L+++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+
JJ..7_0376 +335639 MTFTQKE--LFNKNIEALGNIFLKESLKQIKSSKFELILGKDKLDINLKNTS---------DNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGV +335936

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN ++
JJ..7_0376 +335339 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +335636

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSL KQLPLLKKYANKATIFCADSAYPILAKH+IKPDYVCMLER +
JJ..7_0376 +335039 KDSILSHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSE +335336

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
++ F+ DF EFDK I FI+ SVVH I +L + ++ LV F Y+ L F + SVAHM +L+ L HKNIIFIGQDLAY+K+ SH
JJ..7_0376 +334739 FTAEFFNHDFGEFDKDICFIIKSVVHPNAIHYLNKKTDDFTLVSTYASFINYVKLDD-FGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSH +335036

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E K + AYGGKG+V++ + W +F++ E + + +++ +YNCTEGGARIEG IEKPFLWACENLL KDLNKPF KL PL
JJ..7_0376 +334439 PDDYQNSATYES---KAHEPILTKAYGGKGEVKTHHIWLMFKQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPL +334736

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+ KQNE +LK Y K+ KSI HC+DFN K ++ Y +IK +++L+N Q E + L+ II+ ID +K QID+ N Q DL +ILGPLL QFELNLARIYV
JJ..7_0376 +334139 SLKKQNEFLLKAYYKVCKSIEHCRDFNDKFIKSYKKIKNSFMSLQNSQ--ENEILVKKIIKNIDKIKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +334436

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
JJ..7_0376 +333839 LNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLNKWMERVR +334022

CjjRM3196_1337 vs: JJD26997_0396 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1933bp / 644aa PV: Yes
Function: No annotation data

Score: 127.00 bits: 58.60 e-value: 0.000000
length: 59 gaps: 0 id: 46 positives: 49 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGG
JJ..7_0396 +352487 MTFTPTQKELFNKNIEALSNIFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGG +352661

Score: 1719.00 bits: 745.33 e-value: 0.000000
length: 602 gaps: 15 id: 371 positives: 449 coverage: 0.65 query coverage 0.63

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGYSENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+I+ + L D
JJ..7_0396 +352318 GGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNE +352615

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
L + F QFSRIYFLEL+S YYER+ +++L++N + K I+ +GND D L G+++F+YNLP + THP E L KR LSDTAIIVSTGPSL
JJ..7_0396 +352018 LC--SSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAENFKKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSL +352315

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYA KAT+FCADSAYPILAK+ I+PDYVCMLER D ++ F+ DF EFD+ I+FI A VVH + IE+L+ R ++ + F YY+NL
JJ..7_0396 +351718 TKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVCMLERTDFTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLTFPYYINLKD +352015

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +457
+ G SVAHM Y L+ L HKNII IGQDLAY+K+ SH D+ +E Q E + T AYGGKG+V++ W F+++ ET I + I
JJ..7_0396 +351418 FSYAAVGF-SVAHMSYFLSVLLNHKNIILIGQDLAYAKNGNSHPDDYQNSATYES--QTYEPILTK-AYGGKGEVKTHEVWIFFKQMLETMII--EYSIP +351715

Cj..6_1337 +458 IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFI +557
YNCTEGGARIEGTIEKPFLWACENLL+KDLNKPF KL PL + KQNE +LK Y K+ KSI HCKDF K L ++ I+ +YL+L E +E LN
JJ..7_0396 +351118 TYNCTEGGARIEGTIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKSIEHCKDFSKILSNDFENIQSIYLSL-----NEKEEYLNLA +351415

Cj..6_1337 +558 IQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLER +657
I+KID K +++D K MQDLYEILGPLL QFELNLARIYVLNPKT ED FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K +ER
JJ..7_0396 +350818 IRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMER +351115

Cj..6_1337 +658 IK +659
++
JJ..7_0396 +350518 VR +350521

CjjRM3196_1337 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factor

Score: 1897.00 bits: 822.12 e-value: 0.000000
length: 662 gaps: 9 id: 433 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
BN.._13180 +1295983 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1296280

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ K+IL LN +
BN.._13180 +1296283 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENF +1296580

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYV LER
BN.._13180 +1296583 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIP +1296880

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK ILF+L S VH ++L++NNR +MLV F YL L F + SVA MN+ LA L HKNI+ IGQDLAY+KD SH
BN.._13180 +1296883 LTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSH +1297180

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFET-WISYDKNF-INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
KD+ HEGHFQ+D+N +T+ AYGG GKV+SS W LFR FE + N+ I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
BN.._13180 +1297183 TKDYSNLDKHEGHFQRDKNKYTTQAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1297480

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ YN+IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
BN.._13180 +1297483 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYNKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYV +1297780

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+K+KERK+ K++ER++
BN.._13180 +1297783 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVR +1297966

CjjRM3196_1337 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 1834.00 bits: 794.94 e-value: 0.000000
length: 661 gaps: 16 id: 421 positives: 504 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
BN.._13200 +1299825 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1300122

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ K+IL LN +
BN.._13200 +1300125 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENF +1300422

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
BN.._13200 +1300425 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1300722

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+F+ A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +L HKNIIFIGQDLAY+++ SH
BN.._13200 +1300725 ITAEFFNHDFGEFDKDIIFVCAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSH +1301022

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
BN.._13200 +1301025 PDDYQNSATYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1301322

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++N I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PL QFELNLARIYVL
BN.._13200 +1301325 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVL +1301622

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+K+KERK+ K++ER++
BN.._13200 +1301625 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVR +1301805

CjjRM3196_1337 vs: M635_02360 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 1807.00 bits: 783.29 e-value: 0.000000
length: 662 gaps: 17 id: 415 positives: 501 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
M635_02360 +444737 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +445034

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+I+NTN D L + F QFSRIYFLEL+S YYER+ +++LELN ++
M635_02360 +445037 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILNTNKPEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDF +445334

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH+IKPDYV LER
M635_02360 +445337 KDSILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIP +445634

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK I+F+L S VH ++L++NNR +MLV F YL L F + SVA MN+ LA L HKNI+ IGQDLAY+KD SH
M635_02360 +445637 LTSEFFNNDFGEFDKDIVFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSH +445934

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKN--FINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
KD+ HEGHFQ+D+N +T+ AYG GKVESS+ W LFR FE ++ K +I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
M635_02360 +445937 TKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +446234

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DF K ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
M635_02360 +446237 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYV +446534

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
M635_02360 +446537 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +446720

CjjRM3196_1337 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD protein

Score: 1764.00 bits: 764.75 e-value: 0.000000
length: 602 gaps: 13 id: 381 positives: 462 coverage: 0.64 query coverage 0.57

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++NTN L D
M635_02285 +431889 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNE +432186

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
L + F QFSRIYFLEL+S YYER+ +++LELN + K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSL
M635_02285 +432189 LC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSL +432486

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +I ++ F+ DF EFDK +LF+ A VVH + IE+L+ NR+Y++ PR F Y+ L K
M635_02285 +432489 TKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKL-K +432786

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +457
YF + SVAHM Y L+ L HKNIIFIGQDLAY+++ SH D+ +E Q E + T AYGGK ++++ W F+++ E I K I
M635_02285 +432789 YFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSANYEN--QMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHIT +433086

Cj..6_1337 +458 IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFI +557
YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E LN
M635_02285 +433089 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEYLNLA +433386

Cj..6_1337 +558 IQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLER +657
I+KID K +++D K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER
M635_02285 +433389 IEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMER +433686

Cj..6_1337 +658 IK +659
++
M635_02285 +433689 VR +433692

CjjRM3196_1337 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 1770.00 bits: 767.33 e-value: 0.000000
length: 660 gaps: 22 id: 410 positives: 495 coverage: 0.64 query coverage 0.62

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
M635_02370 +448555 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +448852

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ + L+I+NT L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
M635_02370 +448855 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSSELQSARLMILNTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +449152

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH+IKPDYV LER
M635_02370 +449155 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIP +449452

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL + G SVAHM Y A L +KNIIFIGQDLAY++D SH
M635_02370 +449455 LTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAIGF-SVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSH +449752

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GK ESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
M635_02370 +449755 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKAESSEVWTMFRFFLQDTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +450052

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++N I+ +YL L + + LN I+KID K ++++ K MQDLYEIL LLIQFELNLARIYVLN
M635_02370 +450055 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLN +450352

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
M635_02370 +450355 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +450532

CjjRM3196_1337 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 1910.00 bits: 827.73 e-value: 0.000000
length: 660 gaps: 12 id: 432 positives: 511 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
UC78_1278 +1249144 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1249441

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+SNYYER+ ++IL LN +
UC78_1278 +1249444 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETF +1249741

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKHDIKPDYV LER
UC78_1278 +1249744 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIP +1250041

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y + LS KNIIFIGQDLAY+KD SH
UC78_1278 +1250044 LTSEFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSH +1250341

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
UC78_1278 +1250344 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1250641

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEILGPLL QFELNLARIYVLN
UC78_1278 +1250644 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLN +1250941

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED FNK ++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
UC78_1278 +1250944 PKTKEDVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1251121

CjjRM3196_1337 vs: UC78_1267 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 1828.00 bits: 792.35 e-value: 0.000000
length: 661 gaps: 14 id: 416 positives: 503 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
UC78_1267 +1234947 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1235244

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+SNYYER+ ++IL LN +
UC78_1267 +1235247 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETF +1235544

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKHDIKPDYVCMLER
UC78_1267 +1235547 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVCMLERKA +1235844

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
UC78_1267 +1235847 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1236144

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E ++ L+T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
UC78_1267 +1236147 PDDYQNSASYES--RRYPHLYT-LAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDAKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1236444

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLYEILGPLL QFELNLARIYVL
UC78_1267 +1236447 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVL +1236744

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED FNK ++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
UC78_1267 +1236747 NPKTKEDVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1236927

CjjRM3196_1337 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical protein

Score: 1888.00 bits: 818.24 e-value: 0.000000
length: 661 gaps: 10 id: 432 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
UC78_1276 +1245311 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1245608

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+SNYYER+ ++IL LN +
UC78_1276 +1245611 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENF +1245908

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKHDIKPDYV LER
UC78_1276 +1245911 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIP +1246208

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y + LS KNIIFIGQDLAY+KD SH
UC78_1276 +1246211 LTSEFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSH +1246508

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
UC78_1276 +1246511 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1246808

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+ KSI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYVL
UC78_1276 +1246811 LNKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVL +1247108

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED FNK ++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
UC78_1276 +1247111 NPKTKEDVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1247291

CjjRM3196_1337 vs: C8J_1253 in 81116; NCTC 11828 (Campylobacter jejuni subsp. jejuni 81116, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 2691.00 bits: 1164.62 e-value: 0.000000
length: 663 gaps: 9 id: 591 positives: 618 coverage: 0.90 query coverage 0.89

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN NQ +LFN+NI AL+N LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
C8J_1253 +1261837 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1262134

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK NLIIINTNIL +FDL N YKK N IFLQFSRIYFLELISNYYERYN+EIL+LN+TILS I
C8J_1253 +1262137 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1262434

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
KISII+YGND +DNLMG+KHFIYNL KL THP+SE+FL+KR KLSDTAIIVSTGPSLTKQLPLLK+YANKATIFCADSAYPILAKH+IKPDYVCMLERDD
C8J_1253 +1262437 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1262734

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNL KYFQPIDG+VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH
C8J_1253 +1262737 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1263034

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
AKDFIHEKLHEGHFQKDENLFTS AYGGKG+VESSYFW LFRE+FE WIS+D NFINIYNCTEGGARI+GTIEKPFLWACENLL KDLNKPFPKLNPLNI
C8J_1253 +1263037 AKDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNI +1263334

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNELMLK YNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQI ESKELLNFIIQKID +KYQIDDAKNMQDLYEILGPLL+QFELNLARIYVLNP
C8J_1253 +1263337 NKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNP +1263634

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +663
KT EDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL RIKNANK
C8J_1253 +1263637 KTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK +1263823

CjjRM3196_1337 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factor

Score: 1757.00 bits: 761.73 e-value: 0.000000
length: 661 gaps: 19 id: 416 positives: 499 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLK+IKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLY YGFGNGI
CJ.._06665 +1261511 MTFIPTQKELFNKNIEALGNILLKESLKKIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGI +1261808

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++NTN L D L + F QFSRIYFLEL+S YYER+ +++LELN +
CJ.._06665 +1261811 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1262108

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYV LER
CJ.._06665 +1262111 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIP +1262408

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK I+FI+ SV H I++L++NNR ++LV F YL L YF + SVA M Y L ++L +KNII IGQDLAY+KD SH
CJ.._06665 +1262411 LTSEFFNNDFGEFDKDIMFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKL-DYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSH +1262708

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINI--YNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR +FE I Y + NI YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
CJ.._06665 +1262711 TKDYKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1263008

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+ KSI HC+DF K L ++ +I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
CJ.._06665 +1263011 SLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFKKIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1263308

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJ.._06665 +1263311 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1263491

CjjRM3196_1337 vs: RC25_06245 in CJ677CC519 (Campylobacter jejuni strain CJ677CC519, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 2761.00 bits: 1194.82 e-value: 0.000000
length: 663 gaps: 9 id: 607 positives: 627 coverage: 0.93 query coverage 0.92

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN NQ +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLK+T LY + I EL +MLNTYNDKYLLYPVLYFYGFGNGI
RC25_06245 +1195347 MKFNLNQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKNTN---------DNTFLYGNVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1195644

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW+MFHILDFSNELQK NLIIINTNIL +FDLSN YKK N IFLQFSRIYFLELISNYYERYN+EIL+LNNTILS I
RC25_06245 +1195647 LFKALLQNKNHQHIVVFEKDIEIIWVMFHILDFSNELQKNNLIIINTNILSEFDLSNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNNTILSTI +1195944

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
KISII+YGND +DNLMG+KHFIYNL KL THPYSE+FL+KR KLSDTAIIVSTGPSLTKQLPLLK+YANKATIFCADSAYPILAKH+IKPDYVCMLERDD
RC25_06245 +1195947 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPYSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1196244

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNL KYFQPIDG+VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH
RC25_06245 +1196247 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1196544

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
AKDFIHEKLHEGHFQKDENLFTSTAYGGK KVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI
RC25_06245 +1196547 AKDFIHEKLHEGHFQKDENLFTSTAYGGKDKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +1196844

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQI ESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLL+QFELNLARIYVLNP
RC25_06245 +1196847 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNP +1197144

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +663
KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKL+ERKMQKYLERIKNANK
RC25_06245 +1197147 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLEERKMQKYLERIKNANK +1197333

CjjRM3196_1337 vs: CJM1cam_1292 in CJM1cam (Campylobacter jejuni strain CJM1cam, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor Maf-3/PseD

Score: 2691.00 bits: 1164.62 e-value: 0.000000
length: 663 gaps: 9 id: 591 positives: 618 coverage: 0.90 query coverage 0.89

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN NQ +LFN+NI AL+N LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
CJ..m_1292 +1256137 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1256434

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK NLIIINTNIL +FDL N YKK N IFLQFSRIYFLELISNYYERYN+EIL+LN+TILS I
CJ..m_1292 +1256437 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1256734

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
KISII+YGND +DNLMG+KHFIYNL KL THP+SE+FL+KR KLSDTAIIVSTGPSLTKQLPLLK+YANKATIFCADSAYPILAKH+IKPDYVCMLERDD
CJ..m_1292 +1256737 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1257034

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNL KYFQPIDG+VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH
CJ..m_1292 +1257037 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1257334

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
AKDFIHEKLHEGHFQKDENLFTS AYGGKG+VESSYFW LFRE+FE WIS+D NFINIYNCTEGGARI+GTIEKPFLWACENLL KDLNKPFPKLNPLNI
CJ..m_1292 +1257337 AKDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNI +1257634

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNELMLK YNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQI ESKELLNFIIQKID +KYQIDDAKNMQDLYEILGPLL+QFELNLARIYVLNP
CJ..m_1292 +1257637 NKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNP +1257934

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +663
KT EDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL RIKNANK
CJ..m_1292 +1257937 KTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK +1258123

CjjRM3196_1337 vs: CJH_06700 in F38011 (Campylobacter jejuni subsp. jejuni F38011, complete genome.)
Gene length: 1962bp / 654aa PV: Yes
Function: PseD protein

Score: 1599.00 bits: 693.57 e-value: 0.000000
length: 664 gaps: 15 id: 376 positives: 473 coverage: 0.57 query coverage 0.57

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN+NQ LFN+N+++LNN LKE LKE+ + +ELILGKDNLDINLKDT LYQD IKEL ML TYN+KYLLYPVLYFYGFGNGI
CJH_06700 +1267863 MKFNKNQTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLDINLKDTK---------NHTFLYQDSIKELDIMLKTYNEKYLLYPVLYFYGFGNGI +1268160

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALL+NK H+H+V+FEK++EII IMFH+LDFS EL++ L+I++ N L D +L + F +FSR YFLEL S+YYE+ +EIL LNN ++
CJH_06700 +1268163 LFKALLKNKHHKHLVIFEKELEIIKIMFHLLDFSQELEENRLLILDVNSLEFQDYYDLC--STSPFFEFSRTYFLELSSDYYEKDQEEILNLNNNLMDRF +1268460

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K +I+ GNDP D L G+++ IYNLP L TH + L++R LSDTAIIVSTGPSL KQL LK+YANKATI AD++YPILAKH IKPDYV LER
CJH_06700 +1268463 KNTILLKGNDPKDALQGIEQLIYNLPVLLTHAPYQNLLKQRENLSDTAIIVSTGPSLAKQLDTLKQYANKATIIAADASYPILAKHGIKPDYVLSLERIL +1268760

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
SK FDN+F +FDK ILFI + H + I+ L+ NNR ++L + +F YYL L ++ + ++G SVA + Y LA FL HKNIIFIGQDLAY++D SSH
CJH_06700 +1268763 STSKFFDNNFGDFDKDILFITTHLTHPQTIKKLKNNNRNFLLSYKGSEFIYYLKLKQFGEFVEG-HSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSH +1269060

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKN--FINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
+ I+ K + AYGGK V + WN+FR + E IS K YNCTEGGARIEG IEKPF CE LL +DL KPFPK+ L
CJH_06700 +1269063 PSEHIYGNYDAVDKNKITYHLKTLAYGGKNMVYTKEAWNVFRGILEKHISQTKRLKLCTTYNCTEGGARIEGAIEKPFKELCETLLKEDLKKPFPKVEAL +1269360

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQ-IGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYV +600
N +KQ+EL+LK+Y KIYKSI HCKDF KLL+ YN I E + L + + E K++LN++IQ+ID +K++++D KNM DLYEILGPLL QFELNLARIYV
CJH_06700 +1269363 NKDKQDELLLKSYYKIYKSIKHCKDFSDKLLKSYNHILESFSNLNLISNLNEGKKILNYLIQEIDKIKFKLEDGKNMLDLYEILGPLLTQFELNLARIYV +1269660

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNA +664
LNPKT EDS+NKSL+W+KEH+E +M+Y +I+AQE AL ENI PLE +L +R ++KY +IKNA
CJH_06700 +1269663 LNPKTPEDSYNKSLLWVKEHIEFFDMVYEYIKAQEKALIENITPLENELTQRNLEKYKRKIKNA +1269852

CjjRM3196_1337 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 1892.00 bits: 819.96 e-value: 0.000000
length: 660 gaps: 12 id: 430 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
CJSA_1271 +1268710 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1269007

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
CJSA_1271 +1269010 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1269307

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADSAYPILAKHDIKPDYV LER
CJSA_1271 +1269310 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIP +1269607

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+ DF EFD+ +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
CJSA_1271 +1269610 LTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1269907

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
CJSA_1271 +1269910 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1270207

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVLN
CJSA_1271 +1270210 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLN +1270507

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJSA_1271 +1270510 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1270687

CjjRM3196_1337 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 1892.00 bits: 819.96 e-value: 0.000000
length: 660 gaps: 12 id: 430 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
CJSA_1256 +1250980 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1251277

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
CJSA_1256 +1251280 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1251577

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADSAYPILAKHDIKPDYV LER
CJSA_1256 +1251580 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIP +1251877

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+ DF EFD+ +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
CJSA_1256 +1251880 LTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1252177

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
CJSA_1256 +1252180 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1252477

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVLN
CJSA_1256 +1252480 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLN +1252777

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJSA_1256 +1252780 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1252957

CjjRM3196_1337 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 1732.00 bits: 750.94 e-value: 0.000000
length: 662 gaps: 20 id: 401 positives: 490 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
CJSA_1269 +1264901 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1265198

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ S L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
CJSA_1269 +1265201 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1265498

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
CJSA_1269 +1265501 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1265798

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF+EFDK I FI+ SVVH I +L + + LV F YL L +F + SVAHM +L+ L HKNIIFIGQDLAY+K+ SH
CJSA_1269 +1265801 ITAEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKL-DHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSH +1266098

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E K + AYGGKG+V++ + W +F++ E I + +++ +YNCTEGGARI+G IEKPFLWACENLL+KDLNKPF KL PL
CJSA_1269 +1266101 PDDYQNSATYES---KAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPL +1266398

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
CJSA_1269 +1266401 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1266698

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJSA_1269 +1266701 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1266884

CjjRM3196_1337 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function family

Score: 1347.00 bits: 584.87 e-value: 0.000000
length: 500 gaps: 14 id: 296 positives: 367 coverage: 0.62 query coverage 0.45

Cj..6_1337 +166 FLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLK +265
F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSLTKQLPLLK
IC..1_1265 +1288447 FFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLK +1288744

Cj..6_1337 +266 KYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGI +365
KYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D
IC..1_1265 +1288747 KYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMG +1289044

Cj..6_1337 +366 VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENL---FTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYN +465
SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L +G +K E + +TAYGG+G V + WNLFR +FE + + +++ +YN
IC..1_1265 +1289047 FSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYN +1289344

Cj..6_1337 +466 CTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQK +565
CTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+K
IC..1_1265 +1289347 CTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEK +1289644

Cj..6_1337 +566 IDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKN +665
ID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
IC..1_1265 +1289647 IDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVEG +1289944

CjjRM3196_1337 vs: ICDCCJ07001_1268 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 864bp / 288aa PV: No
Function: hypothetical protein

Score: 2385.00 bits: 1032.62 e-value: 0.000000
length: 511 gaps: 2 id: 503 positives: 505 coverage: 1.75 query coverage 0.76

Cj..6_1337 +153 FDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVS +252
FDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVS
IC..1_1268 +1292239 FDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVS +1292536

Cj..6_1337 +253 TGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYY +352
TGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYY
IC..1_1268 +1292539 TGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYY +1292836

Cj..6_1337 +353 LNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYD +452
LNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYD
IC..1_1268 +1292839 LNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYD +1293136

Cj..6_1337 +453 KNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKE +552
KNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLN L N + +MLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKE
IC..1_1268 +1293139 KNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLN-LEYNSK-*IMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKE +1293436

Cj..6_1337 +553 LLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQ +652
LLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQ
IC..1_1268 +1293439 LLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQ +1293736

Cj..6_1337 +653 KYLERIKNANK +663
KYLERIKNANK
IC..1_1268 +1293739 KYLERIKNANK +1293769

CjjRM3196_1337 vs: CJM1_1292 in M1 (Campylobacter jejuni subsp. jejuni M1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor

Score: 2691.00 bits: 1164.62 e-value: 0.000000
length: 663 gaps: 9 id: 591 positives: 618 coverage: 0.90 query coverage 0.89

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN NQ +LFN+NI AL+N LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
CJM1_1292 +1256127 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1256424

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK NLIIINTNIL +FDL N YKK N IFLQFSRIYFLELISNYYERYN+EIL+LN+TILS I
CJM1_1292 +1256427 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1256724

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
KISII+YGND +DNLMG+KHFIYNL KL THP+SE+FL+KR KLSDTAIIVSTGPSLTKQLPLLK+YANKATIFCADSAYPILAKH+IKPDYVCMLERDD
CJM1_1292 +1256727 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1257024

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNL KYFQPIDG+VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH
CJM1_1292 +1257027 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1257324

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
AKDFIHEKLHEGHFQKDENLFTS AYGGKG+VESSYFW LFRE+FE WIS+D NFINIYNCTEGGARI+GTIEKPFLWACENLL KDLNKPFPKLNPLNI
CJM1_1292 +1257327 AKDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNI +1257624

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNELMLK YNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQI ESKELLNFIIQKID +KYQIDDAKNMQDLYEILGPLL+QFELNLARIYVLNP
CJM1_1292 +1257627 NKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNP +1257924

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +663
KT EDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL RIKNANK
CJM1_1292 +1257927 KTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK +1258113

CjjRM3196_1337 vs: MTVDSCj20_1315 in MTVDSCj20 (Campylobacter jejuni subsp. jejuni strain MTVDSCj20, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 2691.00 bits: 1164.62 e-value: 0.000000
length: 663 gaps: 9 id: 591 positives: 618 coverage: 0.90 query coverage 0.89

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFN NQ +LFN+NI AL+N LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
MT..0_1315 +1291224 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1291521

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK NLIIINTNIL +FDL N YKK N IFLQFSRIYFLELISNYYERYN+EIL+LN+TILS I
MT..0_1315 +1291524 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1291821

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
KISII+YGND +DNLMG+KHFIYNL KL THP+SE+FL+KR KLSDTAIIVSTGPSLTKQLPLLK+YANKATIFCADSAYPILAKH+IKPDYVCMLERDD
MT..0_1315 +1291824 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1292121

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNL KYFQPIDG+VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH
MT..0_1315 +1292124 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1292421

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
AKDFIHEKLHEGHFQKDENLFTS AYGGKG+VESSYFW LFRE+FE WIS+D NFINIYNCTEGGARI+GTIEKPFLWACENLL KDLNKPFPKLNPLNI
MT..0_1315 +1292424 AKDFIHEKLHEGHFQKDENLFTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFINIYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKLNPLNI +1292721

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNELMLK YNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQI ESKELLNFIIQKID +KYQIDDAKNMQDLYEILGPLL+QFELNLARIYVLNP
MT..0_1315 +1292724 NKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARIYVLNP +1293021

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +663
KT EDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL RIKNANK
MT..0_1315 +1293024 KTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK +1293210

CjjRM3196_1337 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD protein

Score: 1731.00 bits: 750.51 e-value: 0.000000
length: 662 gaps: 20 id: 401 positives: 489 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
ER.._01444 +1370964 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1371261

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ S L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN +
ER.._01444 +1371264 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETF +1371561

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP L KR LSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLER +
ER.._01444 +1371564 KYSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSE +1371861

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
++ F+ DF EFD+ + FI+ SVVH I +L + + LV F YL L +F + SVAHM +L+ L HKNIIFIGQDLAY+K+ SH
ER.._01444 +1371864 FTAEFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKL-DHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSH +1372161

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E K + AYGGKG+V++ + W +F++ E I + +++ +YNCTEGGARI+G IEKPFLWACENLL KDLNKPF KL PL
ER.._01444 +1372164 PDDYQNSATYES---KAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPL +1372461

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
ER.._01444 +1372464 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1372761

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
ER.._01444 +1372764 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1372947

CjjRM3196_1337 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 1888.00 bits: 818.24 e-value: 0.000000
length: 660 gaps: 12 id: 429 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+
ER.._01446 +1374773 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGV +1375070

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
ER.._01446 +1375073 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1375370

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADS+YPILAKHDIKPDYV LER
ER.._01446 +1375373 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIP +1375670

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFD+ +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
ER.._01446 +1375673 LTSEFFNNDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1375970

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
ER.._01446 +1375973 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1376270

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVLN
ER.._01446 +1376273 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLN +1376570

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
ER.._01446 +1376573 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1376750

CjjRM3196_1337 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 1810.00 bits: 784.59 e-value: 0.000000
length: 661 gaps: 16 id: 418 positives: 501 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+
ER.._01430 +1357049 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGV +1357346

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
ER.._01430 +1357349 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1357646

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADS+YPILAKHDIKPDYVCMLER +
ER.._01430 +1357649 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSE +1357946

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
++ F+ DF EFD+ I+FI A VVH + IE+L+ R ++ + YY+NL + G SVAHM +LA +L HKNIIFIGQDLAY+++ SH
ER.._01430 +1357949 FTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGF-SVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSH +1358246

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYD--KNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYG K +V++ W LF+ FE I + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
ER.._01430 +1358249 PDDYQNSANYES--QMYEHILTK-AYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1358546

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVL
ER.._01430 +1358549 SLNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVL +1358846

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
ER.._01430 +1358849 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1359029

CjjRM3196_1337 vs: A0W68_07165 in OD267 (Campylobacter jejuni strain OD267, complete genome.)
Gene length: 1229bp / 409aa PV: No
Function: hypothetical protein

Score: 405.00 bits: 178.52 e-value: 0.000000
length: 140 gaps: 9 id: 105 positives: 115 coverage: 0.68 query coverage 0.42

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
A0.._07165 +1337687 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1337984

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS +140
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S
A0.._07165 +1337987 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNS +1338104

Score: 176.00 bits: 79.74 e-value: 0.000000
length: 70 gaps: 1 id: 38 positives: 53 coverage: 0.68 query coverage 0.42

Cj..6_1337 +169 FSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHP-YSEVF +238
FSRIYFLEL+S YYER+ ++IL LN + K I+R GNDP+D L G+++F+YNLP++ THP Y E++
A0.._07165 +1338103 FSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELY +1338310

Score: 647.00 bits: 282.91 e-value: 0.000000
length: 203 gaps: 3 id: 134 positives: 165 coverage: 0.68 query coverage 0.42

Cj..6_1337 +458 IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFI +557
+YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+ KSI HC+DF K ++ Y++IK +++L+N Q E + I
A0.._07165 +1338307 LYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEI--FIQEI +1338604

Cj..6_1337 +558 IQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLE +657
IQ ID K QID+ N Q DL +ILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++E
A0.._07165 +1338607 IQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWME +1338904

Cj..6_1337 +658 RIK +660
R++
A0.._07165 +1338907 RVR +1338913

CjjRM3196_1337 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factor

Score: 1869.00 bits: 810.04 e-value: 0.000000
length: 661 gaps: 18 id: 421 positives: 504 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLK+I+SSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
H730_07620 +1368465 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKD-----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1368762

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDL-SNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsi +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ S ++I D +L SN + F QFSRIYFLEL+S YYER+ ++IL LN +
H730_07620 +1368765 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQ-SARLMILETSSLDIELFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAEN +1369062

Cj..6_1337 +201 ikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER
H730_07620 +1369065 FKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERI +1369362

Cj..6_1337 +301 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +400
+ ++ F+NDF EFDK ILF++ S V+ + I++L++NNR ++L R F +NL Y G SVAHM Y A L +KNIIFIGQDLAY+KD S
H730_07620 +1369365 PLTAEFFNNDFGEFDKDILFVIKSWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFS +1369662

Cj..6_1337 +401 HAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
H KD+ HEGHF++D+ F AYGG GKVESS W +FR + IS KN + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
H730_07620 +1369665 HTKDYKNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1369962

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVL
H730_07620 +1369965 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVL +1370262

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
H730_07620 +1370265 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVR +1370445

CjjRM3196_1337 vs: H730_07630 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: motility accessory factor

Score: 1808.00 bits: 783.73 e-value: 0.000000
length: 661 gaps: 20 id: 414 positives: 501 coverage: 0.64 query coverage 0.62

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLK+I+SSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
H730_07630 +1372274 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKD-----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1372571

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+I+ + L D + L + F QFSRIYFLEL+S YYER+ ++IL LN +
H730_07630 +1372574 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILENDKLQAQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1372871

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GND D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLERD+
H730_07630 +1372874 KNSIVSHGNDSADTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDE +1373171

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
IV++ F+NDF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
H730_07630 +1373174 IVAEFFNNDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1373471

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYD--KNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGGK +V++ W LF++ FE I + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
H730_07630 +1373474 PDDYQNSANYES--QMYEHILTK-AYGGKEEVKTHAIWILFKKYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1373771

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVL
H730_07630 +1373774 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVL +1374071

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
H730_07630 +1374074 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVR +1374254

CjjRM3196_1337 vs: CJE1522 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: motility accessory factor

Score: 1816.00 bits: 787.18 e-value: 0.000000
length: 662 gaps: 17 id: 414 positives: 502 coverage: 0.63 query coverage 0.62

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJE1522 +1412440 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1412737

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
CJE1522 +1412740 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1413037

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
CJE1522 +1413040 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1413337

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+NDF EFDK I+FI+ SV H I++L++NNR ++LV F YL L YF + SVAHMN+ L L +KNII IGQDLAY+KD +H
CJE1522 +1413340 ITAEFFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKL-DYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTH +1413637

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFET-WISYDKNF-INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
++ FIH LH G +++D + F++TAYGG GKV+SS W LFR FE + N+ I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
CJE1522 +1413640 SQGFIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1413937

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
CJE1522 +1413940 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1414237

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJE1522 +1414240 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1414423

CjjRM3196_1337 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factor

Score: 1758.00 bits: 762.16 e-value: 0.000000
length: 659 gaps: 22 id: 404 positives: 493 coverage: 0.63 query coverage 0.61

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJE1524 +1416258 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1416555

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
CJE1524 +1416558 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1416855

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
CJE1524 +1416858 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1417155

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+NDF EFDK I+F+ + VVH + IE+L+ NR+Y+++PR F Y+ L KYF + SVAHM Y L+ L HKNII IGQDLAY+++ SH
CJE1524 +1417158 ITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKL-KYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSH +1417455

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E Q E + T AYGGK ++++ W F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
CJE1524 +1417458 PDDYQNSANYES--QMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1417755

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+ KSI HC+DF K L ++ +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVLNP
CJE1524 +1417758 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSL-----NEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNP +1418055

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJE1524 +1418058 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1418232

CjjRM3196_1337 vs: CjjRM1285_1333 in RM1285 (Campylobacter jejuni subsp. jejuni strain RM1285, complete genome.)
Gene length: 1968bp / 656aa PV: No
Function: motility accessory factor (function unknown)

Score: 1711.00 bits: 741.88 e-value: 0.000000
length: 662 gaps: 17 id: 406 positives: 495 coverage: 0.62 query coverage 0.61

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MKFNQNQIKLFNRNINALNNT+LKESLK+IKSSKFELILGKDNLDINLK+TS LY++ I EL +MLN YNDKYLLYPVLYFYGFGNGI
Cj..5_1333 +1294836 MKFNQNQIKLFNRNINALNNTVLKESLKQIKSSKFELILGKDNLDINLKNTS---------DNTFLYKNAIDELNSMLNIYNDKYLLYPVLYFYGFGNGI +1295133

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEK++EII IM H++DFS EL++ LII++ N L D +L + N F QFSR YFLEL S+YYE+ K IL+LN ++
Cj..5_1333 +1295136 LFKALLQNKNHQHIVVFEKELEIIKIMLHLMDFSQELKENKLIILDINSLEFQDYYDLC--SSNPFFQFSRTYFLELSSDYYEKDKKYILKLNKDLIEKF +1295433

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGND DNL G+++ IYNLPK+ TH + FL+KR LSDTAIIVSTGPSLTKQLP+LKKYANKATI ADS+YPILAKHDIKPDYV LER
Cj..5_1333 +1295436 KNSILLYGNDSKDNLQGIEQLIYNLPKMITHTAYQDFLKKRENLSDTAIIVSTGPSLTKQLPILKKYANKATIISADSSYPILAKHDIKPDYVVSLERIL +1295733

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+N+F +FDK ILFI + H + I+ LE+NNR +MLV R+ +F YL L K+ + +G SVA + Y LA FL HKNIIFIGQDLAYS D SH
Cj..5_1333 +1295736 LTSEFFNNNFGDFDKDILFITTHLTHPQTIKNLEKNNRNFMLVHRSSEFTTYLKLKKFGELCEG-HSVANVAYGLAVFLRHKNIIFIGQDLAYSNDGFSH +1296033

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKN---FINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNP +500
KD+ HEGH+++D F + AYGG G VESS++W LFR E I ++ N N YNCTEGGARIEG IEKPF CE LL +LNK FPK++P
Cj..5_1333 +1296036 TKDYRNLNKHEGHYERDFGHFRTIAYGGVGFVESSFYWSLFRFFLEKRI-HEANQLELCNTYNCTEGGARIEGAIEKPFKKTCEALLKNNLNKNFPKIDP +1296333

Cj..6_1337 +501 LNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQ-IGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIY +600
L KQNEL+LK Y KI KSI HCK+F K+LL+ YN I+E + L + + E KE+LN++IQ+ID +K++++D KNM DL EIL LL+QFELNLARI+
Cj..5_1333 +1296336 LSSHKQNELLLKCYYKIIKSINHCKNFKKELLKSYNHIQESFSNLNLISNLDEGKEILNYLIQEIDKIKFKLEDRKNMLDLCEILKTLLVQFELNLARIF +1296633

Cj..6_1337 +601 VLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERI +662
VLNPKT EDS+ KSL+W+KEH+E +MIY HI+AQE AL +NIIPLE +L +R ++KY +I
Cj..5_1333 +1296636 VLNPKTSEDSYKKSLLWVKEHIEFFKMIYTHIEAQEKALIKNIIPLENELTQRNLEKYKRKI +1296819

CjjRM3196_1337 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD protein

Score: 1835.00 bits: 795.37 e-value: 0.000000
length: 659 gaps: 18 id: 417 positives: 500 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
AX.._06575 +1262441 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKD-----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1262738

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AX.._06575 +1262741 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1263038

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
AX.._06575 +1263041 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1263338

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK ILF+ A VVH + IE+L+ NR+Y++ PR F Y+ L KYF + SVAHM Y L+ L HKNIIFIGQDLAY+++ SH
AX.._06575 +1263341 ITAEFFNHDFGEFDKDILFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKL-KYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSH +1263638

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E + K + AYGGK ++++ W F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
AX.._06575 +1263641 PDDYQNSANYESQMYKH---ILTEAYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1263938

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL L + + LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVLNP
AX.._06575 +1263941 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNL-----NKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNP +1264238

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AX.._06575 +1264241 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1264415

CjjRM3196_1337 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 1804.00 bits: 782.00 e-value: 0.000000
length: 660 gaps: 22 id: 416 positives: 495 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
AX.._06490 +1245620 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1245917

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AX.._06490 +1245920 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1246217

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYV LER
AX.._06490 +1246220 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIP +1246517

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK ILF+ A VVH + IE+L+ N+ +++ + F YY+NL + G SVAHM Y A LSHKNIIFIGQDLAY++D SH
AX.._06490 +1246520 LTSEFFNNDFGEFDKDILFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGF-SVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSH +1246817

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GK ESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
AX.._06490 +1246820 TKDYSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1247117

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL L + + LN I+KID K +++D K MQDLYEIL LLIQFELNLARIYVLN
AX.._06490 +1247120 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNL-----NKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLN +1247417

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AX.._06490 +1247420 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1247597

CjjRM3196_1337 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 1818.00 bits: 788.04 e-value: 0.000000
length: 662 gaps: 17 id: 417 positives: 500 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
AX.._06565 +1258623 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1258920

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AX.._06565 +1258923 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1259220

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYV LER
AX.._06565 +1259223 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIP +1259520

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK ILF+L S VH ++L++NNR +MLV F YL L F + SVA MN+ LA L HKNI+ IGQDLAY++D SH
AX.._06565 +1259523 LTSEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSH +1259820

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKN--FINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
KD+ HEGHFQ+D+N +T+ AYG GKVESS+ W LFR FE ++ K +I YNCTEGGARIEG IEKPFLWACENLL KDLNKPF KL PL
AX.._06565 +1259823 TKDYSNLDKHEGHFQRDKNKYTTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEPL +1260120

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DF K ++ Y++IK +++L+N Q E K L+ II+ ID +K QID+ N Q DL +ILGPLL QFELNLARIYV
AX.._06565 +1260123 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQ--ENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYV +1260420

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++Y HI+AQENAL +NI+PLE+KLKERK+ K++ER++
AX.._06565 +1260423 LNPKTKEDAFNKSILWIKEHLEFMELVYEHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1260606

CjjRM3196_1337 vs: CjjRM3196_1335 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 2001bp / 667aa PV: Yes
Function: hypothetical protein

Score: 1840.00 bits: 797.53 e-value: 0.000000
length: 662 gaps: 11 id: 426 positives: 503 coverage: 0.64 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
Cj..6_1335 +1288082 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1288379

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS L+++ T L+ SN + F QFSRIYFLELIS YYER+ ++IL LN +
Cj..6_1335 +1288382 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +1288679

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER
Cj..6_1335 +1288682 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +1288979

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
Cj..6_1335 +1288982 ETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +1289279

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
+ I L + +TAYGG+G V + WNLFR +FE + + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL
Cj..6_1335 +1289282 PDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPL +1289579

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARIYVL
Cj..6_1335 +1289582 SLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVL +1289879

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKN +662
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
Cj..6_1335 +1289882 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVEG +1290065

CjjRM3196_1337 vs: CjjRM3197_1337 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 180.00 bits: 81.46 e-value: 0.000000
length: 59 gaps: 0 id: 59 positives: 59 coverage: 1.00 query coverage 1.00

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..7_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1292082

Score: 2851.00 bits: 1233.64 e-value: 0.000000
length: 606 gaps: 0 id: 606 positives: 606 coverage: 1.00 query coverage 1.00

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSN
Cj..7_1337 +1292077 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSN +1292374

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL
Cj..7_1337 +1292377 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +1292674

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK
Cj..7_1337 +1292677 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +1292974

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +457
YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN
Cj..7_1337 +1292977 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +1293274

Cj..6_1337 +458 IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFI +557
IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFI
Cj..7_1337 +1293277 IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFI +1293574

Cj..6_1337 +558 IQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLER +657
IQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLER
Cj..7_1337 +1293577 IQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLER +1293874

Cj..6_1337 +658 IKNANK +663
IKNANK
Cj..7_1337 +1293877 IKNANK +1293892

CjjRM3196_1337 vs: CjjRM3197_1335 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 2002bp / 667aa PV: Yes
Function: No annotation data

Score: 129.00 bits: 59.46 e-value: 0.000000
length: 59 gaps: 0 id: 48 positives: 51 coverage: 0.65 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..7_1335 +1288081 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1288255

Score: 1734.00 bits: 751.80 e-value: 0.000000
length: 608 gaps: 16 id: 384 positives: 460 coverage: 0.65 query coverage 0.65

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS L+++ T L+ SN
Cj..7_1335 +1288250 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +1288547

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
+ F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSL
Cj..7_1335 +1288550 FC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSL +1288847

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L
Cj..7_1335 +1288850 TKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD +1289147

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENL---FTSTAYGGKGKVESSYFWNLFRELFETWISYDKN +457
F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L +G +K E + +TAYGG+G V + WNLFR +FE + +
Cj..7_1335 +1289150 -FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQK +1289447

Cj..6_1337 +458 FIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKE +557
+++ +YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E
Cj..7_1335 +1289450 YLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEE +1289747

Cj..6_1337 +558 LLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQ +657
LN I+KID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+
Cj..7_1335 +1289750 DLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLN +1290047

Cj..6_1337 +658 KYLERIKN +665
K++ER++
Cj..7_1335 +1290050 KWMERVEG +1290071

CjjRM3196_1337 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation data

Score: 812.00 bits: 354.08 e-value: 0.000000
length: 295 gaps: 11 id: 202 positives: 231 coverage: 0.64 query coverage 0.61

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJS3_1430 +1321539 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1321836

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ S L+++NTN L D L + F QFSRIYFLEL+S YYER+ ++IL LN +
CJS3_1430 +1321839 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1322136

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCM +295
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVC+
CJS3_1430 +1322139 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCI +1322421

Score: 938.00 bits: 408.44 e-value: 0.000000
length: 368 gaps: 12 id: 204 positives: 266 coverage: 0.64 query coverage 0.61

Cj..6_1337 +293 VCM-LERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDL +392
+C+ LER +I ++ F+NDF EFDK I+F+ + VVH + IE+L+ NR+Y+++PR F Y+ L KYF + SVAHM Y L+ L HKNII IGQDL
CJS3_1430 +1322378 LCLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKL-KYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDL +1322675

Cj..6_1337 +393 AYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKP +492
AY+++ SH D+ +E Q E + T AYGGK ++++ W F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKP
CJS3_1430 +1322678 AYAENGNSHPDDYQNSANYES--QMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKP +1322975

Cj..6_1337 +493 FPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELN +592
F KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELN
CJS3_1430 +1322978 FEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSL-----NEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELN +1323275

Cj..6_1337 +593 LARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
LARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJS3_1430 +1323278 LARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1323479

CjjRM3196_1337 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation data

Score: 811.00 bits: 353.65 e-value: 0.000000
length: 295 gaps: 11 id: 200 positives: 230 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJS3_1427 +1317722 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1318019

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+I+ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
CJS3_1427 +1318022 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1318319

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCM +295
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVC+
CJS3_1427 +1318322 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCI +1318604

Score: 1021.00 bits: 444.24 e-value: 0.000000
length: 371 gaps: 7 id: 217 positives: 278 coverage: 0.64 query coverage 0.63

Cj..6_1337 +293 VCM-LERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDL +392
+C+ LERD+IV++CF+NDF EFDK I+FI+ SV H I++L++NNR ++LV F YL L YF + SVAHMN+ L L +KNII IGQDL
CJS3_1427 +1318561 LCLYLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKL-DYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDL +1318858

Cj..6_1337 +393 AYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFET-WISYDKNF-INIYNCTEGGARIEGTIEKPFLWACENLLSKDLN +492
AY+KD +H++ FIH LH G +++D + F++TAYGG GKV+SS W LFR FE + N+ I YNCTEGGARIEGTIEKPFLWACENLL KDLN
CJS3_1427 +1318861 AYAKDGQTHSQGFIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLN +1319158

Cj..6_1337 +493 KPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQF +592
KPF KL PL +NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QF
CJS3_1427 +1319161 KPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQF +1319458

Cj..6_1337 +593 ELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +663
ELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
CJS3_1427 +1319461 ELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1319671

CjjRM3196_1337 vs: A0W69_07845 in WP2202 (Campylobacter jejuni strain WP2202, complete genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 1732.00 bits: 750.94 e-value: 0.000000
length: 604 gaps: 15 id: 379 positives: 457 coverage: 0.64 query coverage 0.57

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ S L+I+ T L+ SN
A0.._07845 +1463611 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSN +1463908

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
+ F QFSRIYFLEL+S YYER+ ++IL LN + K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSL
A0.._07845 +1463911 FC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSL +1464208

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +I ++ F+ DF EFDK I+FI A VVH + IE+L+ +R ++ + F YY+NL
A0.._07845 +1464211 TKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKD +1464508

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNF +457
+ G SVAH +LA +LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K
A0.._07845 +1464511 FSYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMG +1464808

Cj..6_1337 +458 INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +557
I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E +N
A0.._07845 +1464811 ITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFENIQSIYLSL-----NEKEEDIN +1465108

Cj..6_1337 +558 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +657
I+KID K +++D K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++
A0.._07845 +1465111 LAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWM +1465408

Cj..6_1337 +658 ERIK +661
ER++
A0.._07845 +1465411 ERVR +1465420

CjjRM3196_1337 vs: QZ67_01453 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1512bp / 504aa PV: Yes
Function: hypothetical protein

Score: 1752.00 bits: 759.57 e-value: 0.000000
length: 672 gaps: 33 id: 417 positives: 497 coverage: 0.83 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
QZ67_01453 +1322595 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1322892

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
QZ67_01453 +1322895 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1323192

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADSAYPILAKHDIKPDYV LER
QZ67_01453 +1323195 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIP +1323492

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+ DF EFD+ +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
QZ67_01453 +1323495 LTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1323792

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
QZ67_01453 +1323795 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1324092

Cj..6_1337 +501 INKQNELML-KTYNKIYKSIYHCKDFNKKLLQEYNEIKE--------LYLTLENLQI---GESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQ +600
+NKQNE +L Y K+Y+S Y I E + L + + I + K + +++K +K +++D K MQDLY+IL L IQ
QZ67_01453 +1324095 LNKQNEFLL*MAYYKVYQS--------------Y*AIVENF**NSK*MILKIYKVYI*V*MKKKRISI*LLKK*MSLKTKLEDIKQMQDLYDILQSLFIQ +1324392

Cj..6_1337 +601 FELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +672
FELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
QZ67_01453 +1324395 FELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1324608

CjjRM3196_1337 vs: QZ67_01469 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 1724.00 bits: 747.49 e-value: 0.000000
length: 662 gaps: 20 id: 399 positives: 489 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+
QZ67_01469 +1336523 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGV +1336820

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
QZ67_01469 +1336823 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1337120

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADSAYPILAKH IKPDYVCMLER +
QZ67_01469 +1337123 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHGIKPDYVCMLERTE +1337420

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF+EFDK I FI+ SVVH I +L + + LV F YL L +F + SVAHM +L+ L HKNIIFIGQDLAY+K+ SH
QZ67_01469 +1337423 ITAEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKL-DHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSH +1337720

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E K + AYGGKG+V++ + W +F++ E I + +++ +YNCTEGGARI+G IEKPFLWACENLL+KDLNKPF KL PL
QZ67_01469 +1337723 PDDYQNSATYES---KAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPL +1338020

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK +++L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
QZ67_01469 +1338023 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1338320

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
QZ67_01469 +1338323 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1338506

CjjRM3196_1337 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 1892.00 bits: 819.96 e-value: 0.000000
length: 660 gaps: 12 id: 430 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
QZ67_01471 +1340332 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1340629

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+I+ + L D L + F QFSRIYFLEL+S YYER+ +++LELN ++
QZ67_01471 +1340632 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELC--SFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYF +1340929

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SII +GND D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYAN ATIFCADSAYPILAKHDIKPDYV LER
QZ67_01471 +1340932 KDSIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIP +1341229

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+ DF EFD+ +LF+ S V+ + I++L++NNR +ML+ R DF +N +Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
QZ67_01471 +1341232 LTSEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1341529

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
QZ67_01471 +1341532 TKDYSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1341829

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DFNK L ++ I+ +YL+L E +E +N I+KID K +++D K MQDLY+IL L IQFELNLARIYVLN
QZ67_01471 +1341832 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLN +1342129

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
QZ67_01471 +1342132 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1342309

CjjRM3196_1337 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 1827.00 bits: 791.92 e-value: 0.000000
length: 661 gaps: 16 id: 422 positives: 503 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q + FN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNGI
N149_1281 +1278070 MTFIPTQKEFFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGI +1278367

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ S L+++ TN L D L + F QFSRIYFLEL+S YYER+ ++IL LN +
N149_1281 +1278370 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLSTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1278667

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
N149_1281 +1278670 KNSIVSHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1278967

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL + G SVAH +LA +LSHKNIIFIGQDLAY+++ SH
N149_1281 +1278970 ITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGF-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1279267

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N149_1281 +1279270 PDDYQNSANYES--QMYEHILT-IAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1279567

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+ +SI HC+DF K L ++ +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
N149_1281 +1279570 SLNKQNEFLLKAYYKVCQSIEHCRDFSKILSNDFEKIQSVYLSL-----NEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +1279867

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N149_1281 +1279870 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1280050

CjjRM3196_1337 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factor

Score: 1786.00 bits: 774.24 e-value: 0.000000
length: 660 gaps: 22 id: 412 positives: 494 coverage: 0.64 query coverage 0.62

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
N149_1298 +1294864 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1295161

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
N149_1298 +1295164 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1295461

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYV LER
N149_1298 +1295464 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIP +1295761

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL + G SVAHM Y A LSHKNIIFIGQDLAY++D SH
N149_1298 +1295764 LTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGF-SVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSH +1296061

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GK ESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N149_1298 +1296064 TKDYSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLS +1296361

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+ KSI HC+DF K L ++ +I+ +YL L + + LN I+KID K ++++ K MQDLYEIL LLIQFELNLARIYVLN
N149_1298 +1296364 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLN +1296661

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N149_1298 +1296664 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1296841

CjjRM3196_1337 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factor

Score: 1718.00 bits: 744.90 e-value: 0.000000
length: 662 gaps: 20 id: 398 positives: 487 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDK+LLYPVLYFYGFGNGI
N149_1296 +1291055 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGI +1291352

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
N149_1296 +1291355 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1291652

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
N149_1296 +1291655 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +1291952

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
N149_1296 +1291955 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1292252

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E + K + AYGGK K+++ + W +F+ E + + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
N149_1296 +1292255 PDDYQNSANYESQMYKH---ILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1292552

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
N149_1296 +1292555 SLNKQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1292852

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
N149_1296 +1292855 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1293038

CjjRM3196_1337 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 1801.00 bits: 780.71 e-value: 0.000000
length: 660 gaps: 22 id: 411 positives: 497 coverage: 0.64 query coverage 0.62

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI +L N +LKESLKEI+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AB.._08255 +1558359 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1558656

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AB.._08255 +1558659 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1558956

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ TH + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHDIKPDYV LER
AB.._08255 +1558959 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIP +1559256

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL + G SVAHM Y A LSHKNIIFIGQDLAY+KD SH
AB.._08255 +1559259 LTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGF-SVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSH +1559556

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GK ESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
AB.._08255 +1559559 TKDYKNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1559856

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL+L E +E +N I+KID K ++++ K MQDLYEIL PLLIQFELNLA+IYVLN
AB.._08255 +1559859 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLSL-----NEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLN +1560156

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AB.._08255 +1560159 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1560336

CjjRM3196_1337 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1701.00 bits: 737.57 e-value: 0.000000
length: 662 gaps: 20 id: 395 positives: 485 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI +L N +LKESLKEI+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AB.._08325 +1571356 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1571653

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AB.._08325 +1571656 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +1571953

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ TH + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
AB.._08325 +1571956 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1572253

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
AB.._08325 +1572256 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1572553

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGGK K+++ + W +F+ E + + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
AB.._08325 +1572556 PDDYQNSANYES--QMYEHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1572853

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
AB.._08325 +1572856 SLNKQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1573153

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AB.._08325 +1573156 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1573339

CjjRM3196_1337 vs: AB430_08340 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 1736.00 bits: 752.67 e-value: 0.000000
length: 604 gaps: 15 id: 377 positives: 457 coverage: 0.63 query coverage 0.57

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ + L D +
AB.._08340 +1575334 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +1575631

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
L + F QFSRIYFLEL+S YYER+ ++IL LN + K SI+ YGNDP+D L G+++F+YNLP++ THP L KR LSDTAIIVSTGPSL
AB.._08340 +1575634 LC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSL +1575931

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
KQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +I ++ F+ DF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL
AB.._08340 +1575934 IKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKN +1576231

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNF +457
+ G SVAH +LA LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T AYGG GKVE+ W LF+ FE + K
AB.._08340 +1576234 FCYAAVGF-SVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILT-IAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMG +1576531

Cj..6_1337 +458 INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +557
I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DF K L ++ I+ +YL+L E +E +N
AB.._08340 +1576534 ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSVYLSL-----NEKEEDIN +1576831

Cj..6_1337 +558 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +657
I+KID K ++++ K MQDLYEIL PLLIQFELNLA+IYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++
AB.._08340 +1576834 LAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWM +1577131

Cj..6_1337 +658 ERIK +661
ER++
AB.._08340 +1577134 ERVR +1577143

CjjRM3196_1337 vs: VC76_06695 in FB1 (Campylobacter coli strain FB1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1621.00 bits: 703.06 e-value: 0.000000
length: 666 gaps: 23 id: 388 positives: 486 coverage: 0.59 query coverage 0.58

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F NQ ++F +NINAL N IL++ L++IK +KFEL+LG DNLDINL++T K+N LLY + I EL +ML YNDKYLLYPVLYFYGFGNGI
VC76_06695 +1299942 MNFTSNQQEIFKQNINALVNEILRKKLQKIKNTKFELLLGNDNLDINLRNT--KDN-------TLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGI +1300239

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnlii--intnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTils +200
LFKALLQNK HQHIV+FE DIEI+WIMFH+LDFS E++K +II N + D+++ L K F+ F RIYFLEL S YYE+ NK+I ++N ++
VC76_06695 +1300242 LFKALLQNKHHQHIVIFENDIEILWIMFHLLDFSCEIKKNKIIIFDTNEINIKDYEMLTLTKP----FISFLRIYFLELSSSYYEKMNKDIQKVNKNLME +1300539

Cj..6_1337 +201 iikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLER +300
K ++I YGNDP+D L G+++F++NLPK+ TH + ++KR LS TAIIVSTGPSL KQLPLLKKY NKATIFCADSAYPILAKH+IKPDYVCMLER
VC76_06695 +1300542 YFKKAMIGYGNDPLDALQGIEQFVHNLPKMLTHSSYKELIKKRKNLSKTAIIVSTGPSLIKQLPLLKKYQNKATIFCADSAYPILAKHNIKPDYVCMLER +1300839

Cj..6_1337 +301 DDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQS +400
+ ++ F+ DFK+FDK I+FI AS++H I +LE+NNREY+L+ R F ++ Y D SVAHM Y +A L HKNIIFIGQDLAY+++
VC76_06695 +1300842 ASLTAEFFNHDFKDFDKDIVFICASLIHPNAITYLEKNNREYILISRFLSFALFIACHDY-GYFDQSPSVAHMSYIIAAKLCHKNIIFIGQDLAYAENGD +1301139

Cj..6_1337 +401 SHAKDFIHEKLHEGH-FQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNP +500
SH +++ E +QK E L YGGK V++ W LF+++ E I D +IN YNCTEGGA IEGTIE+ F C+ LL DLNKPF KL
VC76_06695 +1301142 SHPQEYQNSSTFESNIYQKIECL----GYGGKNSVKTHSIWLLFKQIIEQLI-LDYPYINTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIKLKK +1301439

Cj..6_1337 +501 LNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYV +600
NI KQNELMLK+Y KIYKSI HC +F K+ L +I+ Y TL L + ESKE+L+ +IQ ID K ++++ NM D YEILGPLL+QFELNLARIYV
VC76_06695 +1301442 PNIQKQNELMLKSYAKIYKSIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKEILDILIQIIDNFKTKLENV-NMVDFYEILGPLLMQFELNLARIYV +1301739

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNANK +666
LNPKTLEDSFNKS++WIKEHLE I M+YGHI+AQENALF+NIIPLE++LK+R +KYL+RIKNANK
VC76_06695 +1301742 LNPKTLEDSFNKSVLWIKEHLEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIKNANK +1301937

CjjRM3196_1337 vs: AR446_01560 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1832bp / 610aa PV: No
Function: No annotation data

Score: 1671.00 bits: 724.63 e-value: 0.000000
length: 625 gaps: 63 id: 372 positives: 446 coverage: 0.61 query coverage 0.56

Cj..6_1337 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHIL
AR.._01560 +311272 VLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHIL------ +311569

Cj..6_1337 +138 QKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVF +237
D SN EL S +IL LN + K SI+ YGNDP+D L G+++F+YNLP++ THP +
AR.._01560 +310972 ----------------DFSN------------------ELQS--------DILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKEL +311269

Cj..6_1337 +238 LRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNN +337
L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHDIKPDYVCMLERD+IV++CF+NDF EFDK I+FI+ SV H I++L++NN
AR.._01560 +310672 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNN +310969

Cj..6_1337 +338 REYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYF +437
R ++LV F YL L YF + SVAHMN+ L L +KNII IGQDLAY+KD +H++ FIH LH G +++D + F++TAYGG GKV+SS
AR.._01560 +310372 RAFILVSTYASFIQYLKL-DYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERDLDKFSTTAYGGNGKVQSSEI +310669

Cj..6_1337 +438 WNLFRELFET-WISYDKNF-INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEI +537
W LFR FE + N+ I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DFN ++ Y++I
AR.._01560 +310072 WTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKI +310369

Cj..6_1337 +538 KELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENA +637
K + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENA
AR.._01560 +309772 KNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENA +310069

Cj..6_1337 +638 LFENIIPLEQKLKERKMQKYLERIK +662
L +NI+PLE+KLKERK+ K++ER++
AR.._01560 +309472 LIKNILPLEEKLKERKLDKWMERVR +309544

CjjRM3196_1337 vs: AR446_01545 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1228bp / 409aa PV: No
Function: No annotation data

Score: 772.00 bits: 336.83 e-value: 0.000000
length: 319 gaps: 57 id: 199 positives: 223 coverage: 0.77 query coverage 0.47

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
AR.._01545 +305646 MIFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +305943

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHIL D SN EL S +IL LN +
AR.._01545 +305346 LFKALLQNKNHQHIVVFEKDIEIIWIMFHIL----------------------DFSN------------------ELQS--------DILGLNKKLAENF +305643

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHDIKPDYVCMLERD+
AR.._01545 +305046 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDE +305343

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILF +319
IV++CF+NDF EFDK I+F
AR.._01545 +304746 IVAECFNNDFGEFDKDIVF +304800

Score: 289.00 bits: 128.48 e-value: 0.000000
length: 97 gaps: 3 id: 60 positives: 71 coverage: 0.77 query coverage 0.47

Cj..6_1337 +429 KGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFN +525
+ ++ + F N F E + + Y I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DFN
AR.._01545 +304926 RDEIVAECFNNDFGEFDKDIVFY---HITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFN +305214

Score: 285.00 bits: 126.75 e-value: 0.000000
length: 77 gaps: 0 id: 55 positives: 71 coverage: 0.77 query coverage 0.47

Cj..6_1337 +584 LLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKN +660
+L QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AR.._01545 +304652 ILTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +304880

CjjRM3196_1337 vs: ATE51_00894 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1945bp / 648aa PV: Yes
Function: hypothetical protein

Score: 132.00 bits: 60.76 e-value: 0.000000
length: 59 gaps: 0 id: 48 positives: 51 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
AT.._00894 +455222 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +455396

Score: 1721.00 bits: 746.20 e-value: 0.000000
length: 604 gaps: 15 id: 376 positives: 453 coverage: 0.65 query coverage 0.64

Cj..6_1337 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++ + L D +
AT.._00894 +455053 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +455350

Cj..6_1337 +158 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +257
L + F QFSRIYFLEL+S YYER+ ++IL LN + K SI+ YGNDP+D L G+++F+YNLP++ THP L KR LSDTAIIVSTGPSL
AT.._00894 +454753 LC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSL +455050

Cj..6_1337 +258 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +357
TKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +I ++ F+ DF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL
AT.._00894 +454453 TKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKN +454750

Cj..6_1337 +358 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNF +457
+ G SVAH +LA LSHKNIIFIGQDLAY+++ SH D+ +E Q E + T AYGG GKVE+ W LF+ FE + K
AT.._00894 +454153 FCYAAVGF-SVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDYQNSANYES--QMYEHILT-IAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMG +454450

Cj..6_1337 +458 INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +557
I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++N I+ +YL L + + LN
AT.._00894 +453853 ITTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLN +454150

Cj..6_1337 +558 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +657
I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++
AT.._00894 +453553 LAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWM +453850

Cj..6_1337 +658 ERIK +661
ER++
AT.._00894 +453253 ERVR +453262

CjjRM3196_1337 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 1705.00 bits: 739.29 e-value: 0.000000
length: 662 gaps: 20 id: 398 positives: 487 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AT.._00898 +459031 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +459328

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ S L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AT.._00898 +458731 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +459028

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
AT.._00898 +458431 KNSIVFHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +458728

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
AT.._00898 +458131 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +458428

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGGK K+++ + W +F+ E + + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
AT.._00898 +457831 PDDYQNSANYES--QMYEHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPL +458128

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
AT.._00898 +457531 SLNKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +457828

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AT.._00898 +457231 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +457414

CjjRM3196_1337 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical protein

Score: 1794.00 bits: 777.69 e-value: 0.000000
length: 660 gaps: 22 id: 410 positives: 496 coverage: 0.64 query coverage 0.62

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI +L N +LKESLK+I+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AT.._00928 +472027 MIFTPTQKELFNKNIESLSNILLKESLKQIQSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +472324

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
AT.._00928 +471727 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +472024

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHDIKPDYV LER
AT.._00928 +471427 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIP +471724

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK I+F+ A VVH + IE+L+ N+ +++ + F YY+NL + G SVAHM Y A LSHKNIIFIGQDLAY++D SH
AT.._00928 +471127 LTSEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGF-SVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSH +471424

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GK ESS W +FR + IS +N I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
AT.._00928 +470827 TKDYSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +471124

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+ KSI HC+DF K L ++ +I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PLLIQFELNLA+IYVLN
AT.._00928 +470527 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLN +470824

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
AT.._00928 +470227 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +470404

CjjRM3196_1337 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 1729.00 bits: 749.65 e-value: 0.000000
length: 662 gaps: 20 id: 400 positives: 489 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
YSQ_02185 +448770 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +449067

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ S L+++ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN +
YSQ_02185 +448470 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETF +448767

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLER +
YSQ_02185 +448170 KYSILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSE +448467

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
++ F+ DF EFD+ + FI+ SVVH I +L + + LV F YL L +F + SVAHM +L+ L HKNIIFIGQDLAY+K+ SH
YSQ_02185 +447870 FTAEFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKL-DHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSH +448167

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E K + AYGGKG+V++ + W +F++ E I + +++ +YNCTEGGARI+G IEKPFLWACENLL KDLNKPF KL PL
YSQ_02185 +447570 PDDYQNSATYES---KAHEPILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPL +447867

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLA+IYV
YSQ_02185 +447270 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYV +447567

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSQ_02185 +446970 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +447153

CjjRM3196_1337 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD protein

Score: 1837.00 bits: 796.24 e-value: 0.000000
length: 659 gaps: 16 id: 422 positives: 501 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSQ_02175 +444961 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +445258

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++NTN L D L + F QFSRIYFLEL+S YYER+ ++IL LN +
YSQ_02175 +444661 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +444958

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGND D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
YSQ_02175 +444361 KNSIVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +444658

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL K F SVAHM Y L+ L HKNIIFIGQDLAY+++ SH
YSQ_02175 +444061 ITAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINL-KDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSH +444358

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E + K + AYGGK ++++ W F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
YSQ_02175 +443761 PDDYQNSANYESQMYKH---ILTEAYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +444058

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+ KSI HC+DF K L + +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PLLIQFELNLARIYVLNP
YSQ_02175 +443461 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSL-----NEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNP +443758

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSQ_02175 +443161 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +443335

CjjRM3196_1337 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1884.00 bits: 816.51 e-value: 0.000000
length: 660 gaps: 12 id: 431 positives: 507 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSQ_02255 +462692 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +462989

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++NTN L D L + F QFSRIYFLEL+S YYER+ ++IL LN +
YSQ_02255 +462392 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +462689

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGND D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYV LER
YSQ_02255 +462092 KNSIVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIP +462389

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFD+ +LF+ S V+ + I++L++NNR ++L R F +NL Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
YSQ_02255 +461792 LTSEFFNNDFGEFDQDVLFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +462089

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHF++D+ F AYGG GKVESS W +FR + IS KN + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
YSQ_02255 +461492 TKDYKNLDKHEGHFRRDKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +461789

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+ KSI HC+DF K L + +I+ +YL+L E +E LN I+KID K +++D K MQDLYEIL PLLIQFELNLARIYVLN
YSQ_02255 +461192 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSL-----NEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLN +461489

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSQ_02255 +460892 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +461069

CjjRM3196_1337 vs: YSS_07230 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 1705.00 bits: 739.29 e-value: 0.000000
length: 662 gaps: 20 id: 397 positives: 487 coverage: 0.61 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
YSS_07230 +1351597 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1351894

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ S L+++ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN +
YSS_07230 +1351897 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1352194

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
YSS_07230 +1352197 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1352494

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
YSS_07230 +1352497 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +1352794

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGGK K+++ + W +F+ E + + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDLNKPF KL PL
YSS_07230 +1352797 PDDYQNSANYES--QMYEHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPL +1353094

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+ KSI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
YSS_07230 +1353097 SLNKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +1353394

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSS_07230 +1353397 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1353580

CjjRM3196_1337 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical protein

Score: 1164.00 bits: 505.93 e-value: 0.000000
length: 605 gaps: 26 id: 289 positives: 391 coverage: 0.56 query coverage 0.44

Cj..6_1337 +40 GKDNLDINL-KDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +139
GKDNLDIN+ K +K +YQDPIKEL+ L + D + YPVL+FYGFGNGIL+K LLQN+ + I++FEK++E+I + +DFS +L
YSS_07245 +1357466 GKDNLDINIIKKRNLKK----------MYQDPIKELEKNLEYFKD-FTRYPVLFFYGFGNGILYKILLQNQALKRIIIFEKELELIFLALNFIDFSKDLS +1357763

Cj..6_1337 +140 KSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFL +239
L + +D +L + K I F R Y L + ++YE Y ++IL+LN + IIK + GNDP D + G+++F+YNLP++ THP + L
YSS_07245 +1357766 ---LGRLIILHHDDINLPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRGNDPKDAMQGIEQFVYNLPQMITHPSYKELL +1358063

Cj..6_1337 +240 RKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNR +339
KR +SDTAIIVSTGPSLTKQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLERD+IV++CF+NDFK+FDK I+F++AS+VHK+ I +LE+N R
YSS_07245 +1358066 SKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDFKDFDKDIIFLVASLVHKKTISYLEKNQR +1358363

Cj..6_1337 +340 EYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFW +439
+Y+L+ + F L L Y I+G +SV+HM Y LA+ L HKNII IGQDLAY+KD +H++ FIH LH G +++D + F++TAYGG GKV+SS W
YSS_07245 +1358366 KYILIIKGQPFARCLGLDNY-GYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIW +1358663

Cj..6_1337 +440 NLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKEL +539
LFR++FE I++ K YNCT+GGARIE IEKPF CE+LL +K F KL LN +Q +L LK Y KI K + +F K E K++
YSS_07245 +1358666 TLFRQIFENFIAFSKS--KTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKLGLKIYQKIKKNMNLSLNFKK-------ECKKV +1358963

Cj..6_1337 +540 YLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFEN +639
+ NL G+ K L I Q ID +K ++ + K + L EILGP L + + L +Y+ + K D NK WI H +E I ++AQ+ L
YSS_07245 +1358966 QKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLF-LQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKLFAWIYAHESLMENIIELLEAQDKRLKIA +1359263

Cj..6_1337 +640 IIPLE +644
I+PL+
YSS_07245 +1359266 ILPLQ +1359278

CjjRM3196_1337 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 1892.00 bits: 819.96 e-value: 0.000000
length: 660 gaps: 12 id: 430 positives: 510 coverage: 0.66 query coverage 0.65

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSS_07160 +1339246 MIFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1339543

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ + L D L + F QFSRIYFLEL+S YYER+ +++LELN +
YSS_07160 +1339546 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNARLMVLENDKLQAQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1339843

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYV LER
YSS_07160 +1339846 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIP +1340143

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ S+ F+NDF EFDK ILF+ S V+ + I++L++NNR ++L R F +NL Y G SVAHM Y A L +KNIIFIGQDLAY+KD SH
YSS_07160 +1340146 LTSEFFNNDFGEFDKDILFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYG-PSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSH +1340443

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN-IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLN +500
KD+ HEGHFQ+D+ F AYGG GKVESS W +FR + IS KN + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
YSS_07160 +1340446 TKDYKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--KNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1340743

Cj..6_1337 +501 INKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLN +600
+NKQNE +LK Y K+ KSI HC+DFNK L ++ +I+ +YL+L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLN
YSS_07160 +1340746 LNKQNEFLLKAYYKVCKSIKHCRDFNKILSNDFEKIQSIYLSL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLN +1341043

Cj..6_1337 +601 PKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
PKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSS_07160 +1341046 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1341223

CjjRM3196_1337 vs: YSS_07240 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1847.00 bits: 800.55 e-value: 0.000000
length: 661 gaps: 16 id: 421 positives: 507 coverage: 0.65 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSS_07240 +1355406 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1355703

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+++ + L D + L + F QFSRIYFLEL+S YYER+ +++LELN +
YSS_07240 +1355706 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +1356003

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
YSS_07240 +1356006 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +1356303

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
+ ++ F+ DF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
YSS_07240 +1356306 LTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +1356603

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
YSS_07240 +1356606 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1356903

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N I+KID K ++++ K MQDLYEIL PL QFELNLARIYVL
YSS_07240 +1356906 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVL +1357203

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSS_07240 +1357206 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1357386

CjjRM3196_1337 vs: YSU_02220 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1958bp / 652aa PV: No
Function: No annotation data

Score: 828.00 bits: 360.99 e-value: 0.000000
length: 294 gaps: 11 id: 202 positives: 229 coverage: 0.64 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
YSU_02220 +454840 MTFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +455137

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
YSU_02220 +454540 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +454837

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVC +294
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHDIKPDY C
YSU_02220 +454240 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYAC +454519

Score: 1032.00 bits: 448.99 e-value: 0.000000
length: 370 gaps: 6 id: 218 positives: 277 coverage: 0.64 query coverage 0.63

Cj..6_1337 +293 VCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLA +392
+CMLERD+IV++CF+NDF EFDK I+FI+ SV H I++L++NNR ++LV F YL L YF + SVAHMN+ L L +KNII IGQDLA
YSU_02220 +454001 LCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKL-DYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLA +454298

Cj..6_1337 +393 YSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFET-WISYDKNF-INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNK +492
Y+KD +H++ FIH LH G +++D + F++TAYGG GKV+SS W LFR FE + N+ I YNCTEGGARIEGTIEKPFLWACENLL KDLNK
YSU_02220 +453701 YAKDGQTHSQGFIHANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNK +453998

Cj..6_1337 +493 PFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFE +592
PF KL PL +NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFE
YSU_02220 +453401 PFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFE +453698

Cj..6_1337 +593 LNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSU_02220 +453101 LNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +453308

CjjRM3196_1337 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 1840.00 bits: 797.53 e-value: 0.000000
length: 661 gaps: 16 id: 424 positives: 506 coverage: 0.65 query coverage 0.64

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSU_02270 +464985 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +465282

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ + L+++NTN L D L + F QFSRIYFLEL+S YYER+ ++IL LN +
YSU_02270 +464685 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETF +464982

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSL KQLPLLKKYANKATIFCADS+YPILAKH IKPDYVCMLER +
YSU_02270 +464385 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTE +464682

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+NDF EFDK I+FI A VVH + IE+L+ R ++ + F YY+NL + G+ SVAH +LA +LSHKNIIFIGQDLAY+++ SH
YSU_02270 +464085 ITAEFFNNDFGEFDKDIIFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGL-SVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSH +464382

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI--SYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T TAYGG GKVE+ W LF+ FE + K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
YSU_02270 +463785 PDDYQNSANYES--QMYEHILT-TAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +464082

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVL +600
+NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL+L E +E +N I+KID K +++D K MQDLYEIL PL QFELNLARIYVL
YSU_02270 +463485 SLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSL-----NEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVL +463782

Cj..6_1337 +601 NPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +661
NPKT ED+FNKS++WIKEHL+ +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
YSU_02270 +463185 NPKTKEDAFNKSILWIKEHLKFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVR +463365

CjjRM3196_1337 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD protein

Score: 1744.00 bits: 756.12 e-value: 0.000000
length: 659 gaps: 22 id: 403 positives: 491 coverage: 0.63 query coverage 0.61

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
YSU_02210 +451026 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +451323

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ + L+++ T L+ SN + F QFSRIYFLEL+S YYER+ ++IL LN +
YSU_02210 +450726 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENF +451023

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ YGNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
YSU_02210 +450426 KNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +450723

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFDK I+F+ A VVH + IE+L+ NR+Y+++PR F Y+ L KYF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
YSU_02210 +450126 ITAEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKL-KYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +450423

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNI +500
D+ +E Q E + T AYGGK ++++ W F+++ E I K I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +
YSU_02210 +449826 PDDYQNSANYES--QMYEHILTE-AYGGKKEIKTHEVWIFFKQILEAMII--KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +450123

Cj..6_1337 +501 NKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNP +600
NKQNE +LK Y K+ KSI HC+DF K L ++N I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLNP
YSU_02210 +449526 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNP +449823

Cj..6_1337 +601 KTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +659
KT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
YSU_02210 +449226 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +449400

CjjRM3196_1337 vs: A6K30_02235 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1766bp / 588aa PV: Yes
Function: PseD protein

Score: 933.00 bits: 406.28 e-value: 0.000000
length: 282 gaps: 3 id: 207 positives: 233 coverage: 0.65 query coverage 0.58

Cj..6_1337 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
ILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS EL
A6.._02235 +453001 ILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSEL +453298

Cj..6_1337 +138 QKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVF +237
Q + L+++NTN L D L + F QFSRIYFLEL+S YYER+ +++LELN + K SI+ +GNDP+D L G+++F+YNLP++ THP +
A6.._02235 +452701 QSARLMVLNTNKLEIQDYNELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKEL +452998

Cj..6_1337 +238 LRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILF +319
L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYV LER + S+ F+NDF EFDK ILF
A6.._02235 +452401 LSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDILF +452644

Score: 730.00 bits: 318.71 e-value: 0.000000
length: 350 gaps: 26 id: 175 positives: 232 coverage: 0.65 query coverage 0.58

Cj..6_1337 +325 VHKEVIEFLERNNREYML--VPRAYDFFYYLNL-------VKYFQPIDGIV---SVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEG +424
V+ + I++L++N E++L R F + + VK+ + + + H+NY FL + + D Y+KD +H D+ HEG
A6.._02235 +452144 VYPQTIKYLQKNKIEHILYYTSRPSSFIETISIFAHMAM*VKWAKCCYNMAYEFDIRHLNYKNYSFL*DRI*LMQKMDFPYTKDYKTHPDDY----QHEG +452441

Cj..6_1337 +425 HFQKDENLFTST-AYGGKGKVESSYFWNLFREL-FETWISYDKNFINI-YNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLK +524
HFQ+D+ AYGG GKVESS + +L + IS KN + YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK
A6.._02235 +451844 HFQRDKGEHIQCLAYGGNGKVESSGILDYVLDLSLQNTIS--KNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +452141

Cj..6_1337 +525 TYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNK +624
Y K+ KSI HC+DFNK L ++ +I+ +YL L + + LN I+KID K ++++ K MQDLYEIL PL QFELNLARIYVLNPKT ED+FNK
A6.._02235 +451544 AYYKVCKSIKHCRDFNKILSNDFEKIQNIYLNL-----NKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNK +451841

Cj..6_1337 +625 SLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +674
S++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
A6.._02235 +451244 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +451391

CjjRM3196_1337 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 1717.00 bits: 744.47 e-value: 0.000000
length: 662 gaps: 20 id: 399 positives: 487 coverage: 0.62 query coverage 0.60

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
A6.._02165 +440734 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +441031

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ S L+++ T L+ SN + F QFSRIYFLEL+S YYER+ +++LELN +
A6.._02165 +440434 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +440731

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K SI+ +GNDP+D L G+++F+YNLP++ THP + L KR +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYVCMLER +
A6.._02165 +440134 KNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTE +440431

Cj..6_1337 +301 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +400
I ++ F+ DF EFD GI FI+ S+VH I +L + + +V F YL L YF + SVAHM +L+ L HKNIIFIGQDLAY+++ SH
A6.._02165 +439834 ITAEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKL-DYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSH +440131

Cj..6_1337 +401 AKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPL +500
D+ +E Q E + T AYGGK K+++ + W +F+ E + + +++ IYNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL
A6.._02165 +439534 PDDYQNSANYES--QMYEHILTE-AYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +439831

Cj..6_1337 +501 NINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQ-DLYEILGPLLIQFELNLARIYV +600
+NKQNE +LK Y K+Y+SI HC+DFN ++ Y++IK + +L+N Q E + IIQ ID K QID+ N Q DL +ILGPLL QFELNLARIYV
A6.._02165 +439234 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEI--FIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYV +439531

Cj..6_1337 +601 LNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +662
LNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K+ ER++
A6.._02165 +438934 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWTERVR +439117

CjjRM3196_1337 vs: A6K30_02155 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1977bp / 659aa PV: Yes
Function: PseD protein

Score: 920.00 bits: 400.67 e-value: 0.000000
length: 306 gaps: 3 id: 219 positives: 251 coverage: 0.63 query coverage 0.63

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI ALNN +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
A6.._02155 +436925 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +437222

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ + L+++ + L D + L + F QFSRIYFLEL+S YYER+ +++LELN +
A6.._02155 +436625 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELC--SSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENF +436922

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDD +300
K I+R GNDP+D L G+++F+YNLP++ THP + L KR LSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH IKPDYV + ++
A6.._02155 +436325 KNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLYVGKN* +436622

Cj..6_1337 +301 IVSKCF +306
I S+ F
A6.._02155 +436025 INSRVF +436040

Score: 263.00 bits: 117.27 e-value: 0.000000
length: 149 gaps: 12 id: 66 positives: 91 coverage: 0.63 query coverage 0.63

Cj..6_1337 +294 CMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLE-----RNNREYMLVPRAYDFFY--YLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIF +393
CMLER ++ ++ F+ DF EFDK I+FI A VVH + IE+L+ N + ML+ Y +L ++ + G+ + +LA +LSHKNIIF
A6.._02155 +436054 CMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKG*KFSHNSKSSMLLSILYTILKI*FLCML*H-----GLKCCTYDLSYLATYLSHKNIIF +436351

Cj..6_1337 +394 IGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESS +442
IGQDLAY+++ SH D+ +E HFQ D N+F TAYGG GKVESS
A6.._02155 +435754 IGQDLAYAENGNSHPDDYQNSANYERHFQIDMNIF*RTAYGGNGKVESS +435898

Score: 369.00 bits: 162.99 e-value: 0.000000
length: 129 gaps: 5 id: 79 positives: 96 coverage: 0.63 query coverage 0.63

Cj..6_1337 +456 INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +555
I YNCTEGGARIEGTIEKPFLWACENLL KDLNKPF KL PL +NKQNE +LK Y K+Y+SI HC+DF K L ++ +I+ +YL L E +E +N
A6.._02155 +435552 ITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGL-----NEKEEDIN +435849

Cj..6_1337 +556 FIIQKIDIVKYQIDDAKNMQDLYEILGPL +584
I+KID K ++++ K MQDLYEIL PL
A6.._02155 +435252 LAIEKIDEFKNKLENIKQMQDLYEILQPL +435336

Score: 282.00 bits: 125.46 e-value: 0.000000
length: 76 gaps: 0 id: 54 positives: 71 coverage: 0.63 query coverage 0.63

Cj..6_1337 +585 LIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKN +660
++QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQENAL +NI+PLE+KLKERK+ K++ER++
A6.._02155 +435179 VLQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +435404

CjjRM3196_1337 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factor

Score: 1420.00 bits: 616.36 e-value: 0.000000
length: 655 gaps: 26 id: 337 positives: 443 coverage: 0.53 query coverage 0.51

Cj..6_1337 +8 IKLFNRNINALNNTilkeslkeiksskfelIL-GKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +107
+ +F +NI AL N LK+ L +I+ I+ GKDNLDINL +T L+Y++ ++EL MLN Y +KY LYPVLYFYGFGNGIL+KALL
CINS_1188 +1147946 MNMFAKNIQALLNPHLKQKLLQIQKQNKFQIIQGKDNLDINLLNTQ---------DNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALL +1148243

Cj..6_1337 +108 QNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiint--nilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisi +207
QN+NH+HI+VFE D+E+I+ MF+ILDFS EL+++ L+II+T D+D Y +N+ FSR YFLEL SNYYE+Y ++L +NN +L K SI
CINS_1188 +1147646 QNQNHKHIIVFENDLELIYAMFQILDFSKELEEARLVIIDTNDLKRRDYD----YLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSI +1147943

Cj..6_1337 +208 iRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSK +307
+GN P+D L G+++F+YN+P + + P + L KR LSDTAIIVSTGPSL KQLPLLK+Y+ KATIFCADSAYPILAK++IKPDYVCMLER DI ++
CINS_1188 +1147346 FSHGNSPIDVLQGIEQFVYNIPSMISNPSYKELLNKRKNLSDTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAE +1147643

Cj..6_1337 +308 CFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDF +407
F+NDF EFDK I+F+L SVVH ++LE+ + +++ F +++L G SVA M Y LA L HKNIIFIGQDLAY+++ SH KD+
CINS_1188 +1147046 FFNNDFGEFDKDIVFVLKSVVHPNAFKYLEKKQTKIVVISENSHFINFIDLQNLGYAYSG-PSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDY +1147343

Cj..6_1337 +408 IHEKLHEGHFQKDENLFTST-AYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQ +507
F+ D T AYGG V++ + W LF+ E IS ++N YNCTEGGARIEG IEKPF CE LLSK+L KPF KL+ LNINKQ
CINS_1188 +1146746 ----QNSATFESDTYEHIDTLAYGGGYMVKTHFIWLLFKNEMEKLISRNEN-CATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQ +1147043

Cj..6_1337 +508 NELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTL +607
NEL+LK Y KI +SI C D K +E + + ++ + + + + LLN +I +D +K ++++ K M DLYEILGP ++QFELNLARIYVLNPKT
CINS_1188 +1146446 NELLLKAYCKINQSIKKCVDLKKDFQKELDSLNKM---MNDFLLSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTK +1146743

Cj..6_1337 +608 EDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERI +662
EDSFNKS++WIKEHLEWI++I HI AQ+ L +NI LE L R +K +E+I
CINS_1188 +1146146 EDSFNKSVLWIKEHLEWIQLIIAHINAQKLGLIKNIKQLECVLINRGFEKLVEKI +1146308

CjjRM3196_1337 vs: CONCH_0163 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 1911bp / 637aa PV: Yes
Function: motility accessory factor

Score: 1263.00 bits: 548.63 e-value: 0.000000
length: 656 gaps: 28 id: 330 positives: 434 coverage: 0.52 query coverage 0.50

Cj..6_1337 +7 QIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +106
Q +FN+N+ ALNN LKE+LK+IK F+ I GKD LDIN I N GGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KALL
CONCH_0163 +145107 QKHIFNKNLKALNNIKLKETLKKIKILNFKTIQGKDPLDINF----IHN--GGGYT---LYNNTLNELDEKLKLYNDKYLLYPVLYFYGFGNGILYKALL +145404

Cj..6_1337 +107 QNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiR +206
QNKN Q IVVFEK++E I++ FH +DFS EL+ LI++++N L D+ L+ N F F RIYFL+L NYYE+Y K+IL+LN + IK I+
CONCH_0163 +144807 QNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQILF--FSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILS +145104

Cj..6_1337 +207 YGNDPVDNLMGVKHFIYNLPKLFT-HPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKC +306
GN D L G++ F+YNLP + + + + E+ L+++N++ +TAIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAK++IKPDYV LER S+
CONCH_0163 +144507 NGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQV-NTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEF +144804

Cj..6_1337 +307 FDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFI +406
F+NDF EF+K I+FIL+ VVHK+ I FL NN + + + R+ F YL L K F + SVA M Y L L KNIIFIGQDLAY+ D SSH +++
CONCH_0163 +144207 FNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKK-FGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYY +144504

Cj..6_1337 +407 HEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNE +506
+ K Q+ + T+ AY G V++ W LF+++ E IS K I YNCTEGGARI+ TIEKPF C+ LL++++ KPF KL LN NKQ E
CONCH_0163 +143907 YGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSKVNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAKLEKLNENKQKE +144204

Cj..6_1337 +507 LMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLED +606
LMLK++ KI++ I C K+ + N + N I + K II+++D K + + + L E+L PL QFELNLARIYVLNPKT ED
CONCH_0163 +143607 LMLKSFYKIHQVIKLCDSLHKECIYLSNRL--------NFLINDEKNFSS-IIKELDHFKNKFEK---INFLNELLNPLNTQFELNLARIYVLNPKTKED +143904

Cj..6_1337 +607 SFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKNA +662
FNK +WIKEHLEW+E+I GHI+ + +L +NII LE++L+ R +QK + +IKN
CONCH_0163 +143307 VFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNIINLERELENRHLQKQITKIKNT +143472

CjjRM3196_1337 vs: CSUB8521_0178 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1235.00 bits: 536.55 e-value: 0.000000
length: 664 gaps: 35 id: 327 positives: 429 coverage: 0.51 query coverage 0.49

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
+K N+N +F +N AL NT LKE L K F+++ G D LDIN I N GGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGI
CS..1_0178 +160071 IKMNKN---IFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF----IHN--GGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGI +160368

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
L+KALLQNKN Q IVVFEK++E+I++ FH+LDFS EL K +II L D ++ N T F F R+YFL+L +YYERY ++IL+ N + I
CS..1_0178 +159771 LYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEEL-KNGALIILDTSLVDINIYNELCSTSP-FFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYI +160068

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTH-PYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERD +300
K +I+ GN D LMG++ +IYNLP + + + E+ L+++N S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER
CS..1_0178 +159471 KQTILTKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNS-SKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERV +159768

Cj..6_1337 +301 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +400
S+ F+NDF +FDK I+F+L SV+H I +L +N R++M V R Y NL K+F+ + G SVA M Y +A L +K+IIFIGQDLAY+ D SS
CS..1_0178 +159171 KETSEFFNNDFGKFDKDIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNL-KHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSS +159468

Cj..6_1337 +401 HAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINI--YNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNP +500
H K++ + K Q+ + +YGG + ++ W +F+ E +SY KN ++I YNCTEGGARIEGTIEKPF CE LL K+ K F KL
CS..1_0178 +158871 HPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEK +159168

Cj..6_1337 +501 LNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNF--IIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARI +600
LN KQ ELMLK++ K K+I C+ K E + TL L E NF II+++D K +I+ N L ++ L QFELNLARI
CS..1_0178 +158571 LNSAKQIELMLKSFYKTRKAIKICEYLEK-------ECAFISNTLHFLSNDEN----NFKNIIEQLDTFKEKIN---NELILRSVIDSLNTQFELNLARI +158868

Cj..6_1337 +601 YVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +664
YVLNPK ED+FNK+L+WIKEHLEWI M+ H +A + L +NII LE++L+ + +++Y+++IK
CS..1_0178 +158271 YVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIK +158460

CjjRM3196_1337 vs: CSUB8521_0235 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1926bp / 642aa PV: Yes
Function: putative motility accessory factor

Score: 1261.00 bits: 547.77 e-value: 0.000000
length: 657 gaps: 31 id: 330 positives: 426 coverage: 0.51 query coverage 0.50

Cj..6_1337 +7 QIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +106
Q LF +N AL NT LKE L K F+++ G D LDIN I N GGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALL
CS..1_0235 +207301 QKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF----IHN--GGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALL +207598

Cj..6_1337 +107 QNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiR +206
QNKN Q IVVFEK++E+I++ FH+LDFS EL K +II L D ++ N T F F R+YFL+L +YYERY ++IL N + IK +I+
CS..1_0235 +207001 QNKNRQKIVVFEKELELIYLSFHLLDFSEEL-KNGALIILDTSLVDINIYNELCSTSP-FFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILS +207298

Cj..6_1337 +207 YGNDPVDNLMGVKHFIYNLPKLFTH-PYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKC +306
GN D LMG++ +IYNLP + + + E+ L+++N S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER D S+
CS..1_0235 +206701 KGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNS-SKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEF +206998

Cj..6_1337 +307 FDNDFKEFDKGILFILASVVHKEVIEFLERNNREYM-LVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDF +406
F+NDF +FDK I+F+L S+VH ++L++ + ++ + F YYL L K F ++ SVA M Y LA L HKNIIFIGQDLAY+KD SSH K++
CS..1_0235 +206401 FNNDFGDFDKDIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLAL-KDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEY +206698

Cj..6_1337 +407 IHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQN +506
+ K Q+ + T+ YGG V++S W LF+ E I K YN TEGGARIEGTIEKPF CE LL+K L KPF KL LN NKQ
CS..1_0235 +206101 HYGKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQHTSTYNATEGGARIEGTIEKPFKQICEELLTKKLKKPFVKLEKLNQNKQK +206398

Cj..6_1337 +507 ELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNF--IIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKT +606
ELMLK + K++K I C K+ L+ YN + L S + NF II+++D K +I+ + L E++ PL QFELNLARIYVLNPKT
CS..1_0235 +205801 ELMLKAFYKVHKVIKICNILEKECLHIYNTLNFL-----------SNDETNFKKIIEQLDHFKSKIE---KILILKELIDPLNTQFELNLARIYVLNPKT +206098

Cj..6_1337 +607 LEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +663
ED+FNK+L+WIKEHLEWI M+ H +A + L +NII L ++L+ + +++Y+++IK
CS..1_0235 +205501 KEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +205669

CjjRM3196_1337 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1239.00 bits: 538.28 e-value: 0.000000
length: 664 gaps: 35 id: 328 positives: 430 coverage: 0.51 query coverage 0.49

Cj..6_1337 +1 MKFNQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
+K N+N +F +NI AL NT LKE L K F+++ G D LDIN I N GGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGI
CS..3_0172 +155459 IKMNKN---IFEKNIQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF----IHN--GGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGI +155756

Cj..6_1337 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsii +200
L+KALLQNKN Q IVVFEK++E+I++ FH+LDFS EL K +II L D ++ N T F F R+YFL+L +YYERY ++IL+ N + I
CS..3_0172 +155159 LYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEEL-KNGALIILDTSLVDINIYNELCSTSP-FFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYI +155456

Cj..6_1337 +201 kisiiRYGNDPVDNLMGVKHFIYNLPKLFTH-PYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERD +300
K +I+ GN D LMG++ +IYNLP + + + E+ L+++N S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER
CS..3_0172 +154859 KQTILTKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNS-SKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERV +155156

Cj..6_1337 +301 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +400
S+ F+NDF +FDK I+F+L SV+H I +L +N R++M V R Y NL K+F+ + G SVA M Y +A L +K+IIFIGQDLAY+ D SS
CS..3_0172 +154559 KETSEFFNNDFGDFDKDIVFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNL-KHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSS +154856

Cj..6_1337 +401 HAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFINI--YNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNP +500
H K++ + K Q+ + +YGG + ++ W +F+ E +SY KN ++I YNCTEGGARIEGTIEKPF CE LL K+ K F KL
CS..3_0172 +154259 HPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEK +154556

Cj..6_1337 +501 LNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNF--IIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARI +600
LN KQ ELMLK++ K K+I C+ K E + TL L E NF II+++D K +I+ N L ++ L QFELNLARI
CS..3_0172 +153959 LNSAKQIELMLKSFYKTRKAIKICEYLEK-------ECAFISNTLHFLSNDEN----NFKNIIEQLDTFKEKIN---NELILRSVIDSLNTQFELNLARI +154256

Cj..6_1337 +601 YVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +664
YVLNPK ED+FNK+L+WIKEHLEWI M+ H +A + L +NII LE++L+ + +++Y+++IK
CS..3_0172 +153659 YVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIK +153848

CjjRM3196_1337 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factor

Score: 1293.00 bits: 561.57 e-value: 0.000000
length: 664 gaps: 38 id: 335 positives: 439 coverage: 0.52 query coverage 0.51

Cj..6_1337 +4 NQNQIKLFNRNINALNNTilkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFK +103
N Q LF +NI AL N LKE L+ K F++I+G D LDIN I N GGGY LY+D + +L LN YNDKYLLYPVLYFYGFGNGIL+K
CVOL_0220 +187974 NPMQKALFEKNIQALQNVKLKEKLQNFKKNNFKVIVGNDALDINF----IHN--GGGYR---LYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYK +188271

Cj..6_1337 +104 ALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSnliiintnilnDFDLSNL--YKK--TNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsi +203
ALLQNKN Q IVVFEK++E I++ FH +DFS EL+ LI++ D ++ N+ Y + +N F F R+YFL++ +YYE+Y ++IL N +
CVOL_0220 +187674 ALLQNKNRQKIVVFEKELEFIYLSFHYIDFSEELKNGALIVL------DTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLH +187971

Cj..6_1337 +204 ikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERD +303
IK SI RYGND D LMG++ FIYNLPK+ + + KR KLSD AIIVSTGPSL KQLPLLK+Y N A+IFCADSAYPILAK IKPDYV LER
CVOL_0220 +187374 IKRSIYRYGNDSQDSLMGIENFIYNLPKIISNYSFKQLCLKRKKLSDMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERV +187671

Cj..6_1337 +304 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRA-YDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQS +403
S+ F+NDFKE DK +LF+L S+ H ++L NNR+ ++P Y FF + + F ++ SVA M Y LA L HKNIIFIGQDLAY+KD S
CVOL_0220 +187074 KETSEFFNNDFKELDKDVLFVLKSLTHPNTFQYLNANNRK--IIPATYYTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGS +187371

Cj..6_1337 +404 SHAKDFIHEKLHEGHFQKDENL-FTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKL +503
SH K++ + + ++ + KD T+ AYGG+ KV + W LF+ E + K ++N YNCTEGGARI+GTIEKPF CE LL+K LNKPF KL
CVOL_0220 +186774 SHPKEYYYGQ-YDTYDPKDISYHLTTIAYGGQDKVFTNEIWMLFKTQIEEAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKL +187071

Cj..6_1337 +504 NPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARI +603
LN NKQ ELMLK + K+YK+I C K+ L+ YN + ++L+ + K N +I+++D K +I+ + L E++ PL QFELNLARI
CVOL_0220 +186474 EKLNQNKQKELMLKAFYKVYKAIKICNTLEKECLHLYNTL--IFLS------NDEKNFKN-VIEQLDYFKSKIE---KILILKELINPLNTQFELNLARI +186771

Cj..6_1337 +604 YVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +667
YVLNPKT ED+FNK+L+WIKEHLEWI M+ HI+A + L +NII LE++L+ + +++Y+++IK
CVOL_0220 +186174 YVLNPKTKEDAFNKTLLWIKEHLEWILMLKDHIKALKITLEKNIINLEKELENQNLHQYVQKIK +186363

CjjRM3196_1337 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factor

Score: 1399.00 bits: 607.30 e-value: 0.000000
length: 619 gaps: 27 id: 330 positives: 427 coverage: 0.52 query coverage 0.50

Cj..6_1337 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
I G DNLDINL +T L+Y++P++EL ML YN+KY LYPVLYFYGFGNGIL+KALLQNK H+ I+VFEKD+EII MF I+DFS EL
CVOL_1306 +1273458 IQGNDNLDINLLNTQ---------DNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIVFEKDLEIIHTMFSIIDFSKEL +1273755

Cj..6_1337 +138 QKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVF +237
Q+ L+I +TN LN D + ++ L F+R YFLEL SNYYERY +IL++N + +K ++++YGN P+D L G+++F +NLPK+ + P +
CVOL_1306 +1273758 QEFRLVIADTNCLNILDYEIMCRQQP--MLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGIEQFTHNLPKMISCPTYKEL +1274055

Cj..6_1337 +238 LRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNN +337
LRKR DTAIIVSTGPSL+KQL LLK+YANKATIFCADSAYPILAK++IKPDYV LER + S+ F+NDF +FDK I+FIL S ++K I++LE+NN
CVOL_1306 +1274058 LRKRKNSNDTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDIIFILKSYIYKNTIKYLEKNN +1274355

Cj..6_1337 +338 REYMLVPRA-YDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGH-----FQKDENLFTSTAYGGKGK +437
R+YML+ F ++ L Y G SVA M LA L HKNII IGQDLAYS D SH+ ++ + L + + +++D + AYGG+GK
CVOL_1306 +1274358 RKYMLISSTDAKFIFFTQLHNYGYLATG-CSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTY--LTDAYKDNKIYKRDYGKYECIAYGGEGK +1274655

Cj..6_1337 +438 VESSYFWNLFRELFETWISYDKNF-INIYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQ +537
V+SS+ W LFR+ FE+ I+ K + +YNCTEGGARI G IEKPF CE LL+K K F L L +NKQNELMLK Y KI KSI HC++ K Q
CVOL_1306 +1274658 VQSSFVWTLFRQTFESDIALFKHYDTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLKAYTKIKKSIVHCQELTKT-FQ +1274955

Cj..6_1337 +538 EYNEIKELYLTLENLQIGESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQA +637
EY L EN Q S++ LN+II ID +K +I+D KN+ +LYE+L PLLIQFELNLARIYVLNP +D +NKSL+WIKEH+ W+E+I HI+A
CVOL_1306 +1274958 EY-----LSNLNENCQNICSQKDLNYIINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNKSLLWIKEHISWLELIIAHIKA +1275255

Cj..6_1337 +638 QENALFENIIPLEQKLKER +656
QE AL +NIIPL++ + +R
CVOL_1306 +1275258 QEKALNDNIIPLKEAIIQR +1275312

CjjRM3196_1337 vs: CVOL_1208 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation data

Score: 776.00 bits: 338.56 e-value: 0.000000
length: 342 gaps: 14 id: 189 positives: 235 coverage: 0.50 query coverage 0.49

Cj..6_1337 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
I G DNLDIN+ D GGGY LY P++EL LN YNDKYLLYP L+FYGFGNGIL+KALLQN NH+ I+VFE D+ II+ MF ++DFS EL
CVOL_1208 +1175752 IQGNDNLDINIID-------GGGYK---LYDKPLEELNKTLNLYNDKYLLYPALFFYGFGNGILYKALLQNPNHKIILVFEPDVNIIYTMFKVIDFSQEL +1176049

Cj..6_1337 +138 QKSnliiintnilnDFDLSNLYKKTNNIFLQFSRIYFLELISNYYE-RYNKEILELNNTilsiikisiiRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEV +237
++ L++++ N N DL NL+ NN+ F R YFLE+ +YY+ +Y +EIL+LN I IK II G+DP+D L G+KHFI N+PK+ HP +
CVOL_1208 +1175452 KENRLLLLDPNNENINDLKNLF--LNNLIFNFLRTYFLEIHCDYYDGKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIAHPSYKE +1175749

Cj..6_1337 +238 FLRKRNKLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERN +337
L KR LSDTAIIVSTGPSLTKQLPLLK+Y NKA+IFCADSAYPILAK +IKPDYV LER D S+ F+NDF EFDK ILF++ SV H I++LE+N
CVOL_1208 +1175152 LLNKRKNLSDTAIIVSTGPSLTKQLPLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNNDFGEFDKDILFVIKSVTHPNTIKYLEKN +1175449

Cj..6_1337 +338 NREYMLVPRAYDFFYYLNLVKYFQPIDGIVSVAHMNYWLAKF +379
R+YM+V FF Y L F + SVAH+ + F
CVOL_1208 +1174852 KRKYMIVSTPEYFFKYCSLND-FGYFNMGWSVAHILLFIGSF +1174975

Score: 544.00 bits: 238.48 e-value: 0.000000
length: 298 gaps: 13 id: 133 positives: 185 coverage: 0.50 query coverage 0.49

Cj..6_1337 +363 DGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWI-SYDKNFINIYNC +462
DG++ ++ +L+ L H NIIFIGQDLAY SH KD+ E + ++ YGG G V++ W F+++ E I +++K I IYNC
CVOL_1208 +1174806 DGVLPIS---CYLSVHLKHGNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHIDVL---GYGGIGHVKTHKTWIFFKKILENDILTFNKMNIKIYNC +1175103

Cj..6_1337 +463 TEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQKI +562
TEGGARI GTIE+PF CE LL KDLNKPF KL LN+NKQNEL+LK Y KI KS+ + ++ K+L + I + L ++NL I S + I+++I
CVOL_1208 +1174506 TEGGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSVRQYENLKKELCERNISINKNLLHIDNLDIQNSIHIFELILKQI +1174803

Cj..6_1337 +563 DIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIK +660
D +K I + GPL+ QFELNLARIYVLNPKT EDS+NKS++WIKEHL+WI++I HI +Q+ L I+ + +L E+ +E+I+
CVOL_1208 +1174206 DEIKTSIYRCGLLN------GPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSIVTTKDELIEKGFLNLVEKIE +1174497