CSUB8521_0178 vs: Cj1333 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: PseD proteinScore: 1320.00 bits: 573.22 e-value: 0.000000
length: 651 gaps: 29 id: 337 positives: 432 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
Cj1333 +1259710 KELFNKNIEALSNLFLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1260007
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL TS +DI ++ CS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +IL+ GN DAL GI
Cj1333 +1260010 FEKDIEIIWVIFHILDFSNELQSARLMILQTSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQGI +1260307
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
Cj1333 +1260310 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDIL +1260607
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKY----D +402
FVL S +HP T YL+KN R FM V S Y L F Y SVANM + +A+ L +K+I+ IGQDLAYA DG SH K+Y H G + +
Cj1333 +1260610 FVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDYSNLDKHEGHFQRDKN +1260907
CS..1_0178 +403 TYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELML +502
Y Q +YG + ++ W +F+ E+ ++ AK ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +L
Cj1333 +1260910 KYTTQ---------AYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLL +1261207
CS..1_0178 +503 KSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +602
K++YK ++IK C K I N+ L N + N K II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK
Cj1333 +1261210 KAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNK +1261507
CS..1_0178 +603 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +653
++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
Cj1333 +1261510 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1261660
CSUB8521_0178 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factorScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 646 gaps: 20 id: 325 positives: 418 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
A911_06490 +1262986 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1263283
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
A911_06490 +1263286 KNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGND +1263583
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
A911_06490 +1263586 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1263883
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
A911_06490 +1263886 GEFDKDIIFICAGVVHPKAIEYLKD--RNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1264183
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
A911_06490 +1264186 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1264483
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
A911_06490 +1264486 AYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1264783
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
A911_06490 +1264786 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1264921
CSUB8521_0178 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1312.00 bits: 569.77 e-value: 0.000000
length: 642 gaps: 14 id: 330 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+V
A911_06480 +1259177 KELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIV +1259474
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL GI
A911_06480 +1259477 FEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGI +1259774
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
A911_06480 +1259777 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGIC +1260074
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
A911_06480 +1260077 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1260374
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
A911_06480 +1260377 -LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1260674
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
A911_06480 +1260677 IEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1260974
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
A911_06480 +1260977 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1261100
CSUB8521_0178 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD proteinScore: 1346.00 bits: 584.43 e-value: 0.000000
length: 649 gaps: 28 id: 331 positives: 435 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQN
PJ16_07340 +1354391 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1354688
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+N LI+L+T ++I YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN
PJ16_07340 +1354691 KNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGND +1354988
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
PJ16_07340 +1354991 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDF +1355288
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDI+F+ V+HP I YL+ RK++ + R L Y LK+F++L PSVA M+YF+++ L++K+IIFIGQDLAYA +G SHP +Y+
PJ16_07340 +1355291 GEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1355588
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
PJ16_07340 +1355591 YESQMYEHIL-TEAYGGKKEIKTHEFWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1355888
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTL +602
++YK ++IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++
PJ16_07340 +1355891 AYYKVYQSIKHCRDFSK---ILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +1356188
CS..1_0178 +603 LWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +651
LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ16_07340 +1356191 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1356335
CSUB8521_0178 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1323.00 bits: 574.51 e-value: 0.000000
length: 642 gaps: 14 id: 328 positives: 428 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
PJ16_07410 +1367406 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1367703
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN DAL GI
PJ16_07410 +1367706 FEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDPLDALQGI +1368003
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
PJ16_07410 +1368006 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +1368303
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
PJ16_07410 +1368306 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1368603
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
PJ16_07410 +1368606 -LYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1368903
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
PJ16_07410 +1368906 IKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1369203
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ16_07410 +1369206 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1369329
CSUB8521_0178 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1346.00 bits: 584.43 e-value: 0.000000
length: 655 gaps: 36 id: 338 positives: 441 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY+ + E + N KYLLYPVLYFYGFGNGIL+KALLQN
PJ16_07420 +1371215 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1371512
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN
PJ16_07420 +1371515 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGND +1371812
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDF
PJ16_07420 +1371815 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDF +1372112
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FDKD++FV S I+P TI YL+KN R F+ R S + NL + Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
PJ16_07420 +1372115 GEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHE +1372412
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + D G + L+YGG + ++ W MF+ L+ +S KN++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
PJ16_07420 +1372415 GHFRR------DKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1372712
CS..1_0178 +503 IELMLKSFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKED +602
E +LK++YK ++IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELNLARIYVLNPK KED
PJ16_07420 +1372715 NEFLLKAYYKVYQSIKHCRDFSK---ILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1373012
CS..1_0178 +603 AFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +657
AFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ16_07420 +1373015 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1373177
CSUB8521_0178 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1308.00 bits: 568.04 e-value: 0.000000
length: 656 gaps: 40 id: 326 positives: 423 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
PJ17_06980 +1346496 KELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1346793
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN
PJ17_06980 +1346796 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGND +1347093
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
PJ17_06980 +1347096 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDF +1347393
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDI+FV V+HP I YL+ + F+ Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
PJ17_06980 +1347396 GEFDKDIVFVCAGVVHPKAIEYLK--GKTFIITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1347693
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
PJ17_06980 +1347696 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1347993
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNI--------------IEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKE +602
++YK ++IK C K LSND NN +NI I ++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KE
PJ17_06980 +1347996 AYYKVYQSIKHCRDFSK----------ILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKE +1348293
CS..1_0178 +603 DAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +658
DAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++K+++
PJ17_06980 +1348296 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMEKVRR +1348461
CSUB8521_0178 vs: PJ17_07050 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD proteinScore: 1319.00 bits: 572.79 e-value: 0.000000
length: 651 gaps: 29 id: 337 positives: 433 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN ++L N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
PJ17_07050 +1359515 KELFNKNIESLSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1359812
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L+T +I YNELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +IL+ GN DAL GI
PJ17_07050 +1359815 FEKDIEIIWIMFHILDFSSELQSARLMVLNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQGI +1360112
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
PJ17_07050 +1360115 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDIL +1360412
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKY----D +402
FVL S +HP T YL+KN R FM V S Y L F Y SVANM + +A+ L +K+I+ IGQDLAYA DG SH K+Y H G + +
PJ17_07050 +1360415 FVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDYSNLDKHEGHFQRDKN +1360712
CS..1_0178 +403 TYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELML +502
Y Q +YG + ++ W +F+ E+ ++ AK ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +L
PJ17_07050 +1360715 KYTTQ---------AYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLL +1361012
CS..1_0178 +503 KSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +602
K++YK ++IK C K I N+ L N + N K II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK
PJ17_07050 +1361015 KAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNK +1361312
CS..1_0178 +603 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +653
++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ17_07050 +1361315 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1361465
CSUB8521_0178 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD proteinScore: 1326.00 bits: 575.81 e-value: 0.000000
length: 656 gaps: 42 id: 329 positives: 426 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
PJ17_07060 +1363333 KELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1363630
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+L+FS EL+ L++L+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN
PJ17_07060 +1363633 KNHQHIVVFEKDIEIIWIMFHILNFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGND +1363930
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
PJ17_07060 +1363933 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDF +1364230
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDI+FV V+HP I YL+ RK++ + R L Y LK+F++L PSVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+
PJ17_07060 +1364233 GEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1364530
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
PJ17_07060 +1364533 YESQMYEHIL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1364830
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNI--------------IEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKE +602
++YK ++IK C K LSND NN +NI I ++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KE
PJ17_07060 +1364833 AYYKVYQSIKHCRDFSK----------ILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKE +1365130
CS..1_0178 +603 DAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +658
DAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ17_07060 +1365133 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1365298
CSUB8521_0178 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1312.00 bits: 569.77 e-value: 0.000000
length: 642 gaps: 14 id: 330 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+V
N135_01421 +1337409 KELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIV +1337706
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL GI
N135_01421 +1337709 FEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGI +1338006
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N135_01421 +1338009 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGIC +1338306
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
N135_01421 +1338309 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1338606
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
N135_01421 +1338609 -LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1338906
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
N135_01421 +1338909 IEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1339206
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
N135_01421 +1339209 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339332
CSUB8521_0178 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 646 gaps: 20 id: 325 positives: 418 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
N135_01423 +1341218 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1341515
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N135_01423 +1341518 KNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGND +1341815
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
N135_01423 +1341818 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1342115
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
N135_01423 +1342118 GEFDKDIIFICAGVVHPKAIEYLKD--RNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1342415
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
N135_01423 +1342418 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1342715
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
N135_01423 +1342718 AYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1343015
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
N135_01423 +1343018 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343153
CSUB8521_0178 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1312.00 bits: 569.77 e-value: 0.000000
length: 642 gaps: 14 id: 330 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+V
N564_02285 +1299240 KELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIV +1299537
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL GI
N564_02285 +1299540 FEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGI +1299837
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N564_02285 +1299840 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGIC +1300137
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
N564_02285 +1300140 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1300437
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
N564_02285 +1300440 -LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1300737
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
N564_02285 +1300740 IEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1301037
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
N564_02285 +1301040 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1301163
CSUB8521_0178 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 646 gaps: 20 id: 325 positives: 418 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
N564_02295 +1303049 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1303346
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N564_02295 +1303349 KNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGND +1303646
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
N564_02295 +1303649 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1303946
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
N564_02295 +1303949 GEFDKDIIFICAGVVHPKAIEYLKD--RNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1304246
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
N564_02295 +1304249 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1304546
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
N564_02295 +1304549 AYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1304846
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
N564_02295 +1304849 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1304984
CSUB8521_0178 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 646 gaps: 20 id: 325 positives: 418 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
N565_02385 +1341605 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1341902
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N565_02385 +1341905 KNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGND +1342202
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
N565_02385 +1342205 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1342502
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
N565_02385 +1342505 GEFDKDIIFICAGVVHPKAIEYLKD--RNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1342802
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
N565_02385 +1342805 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1343102
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
N565_02385 +1343105 AYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1343402
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
N565_02385 +1343405 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343540
CSUB8521_0178 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1312.00 bits: 569.77 e-value: 0.000000
length: 642 gaps: 14 id: 330 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+V
N565_02375 +1337796 KELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIV +1338093
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL GI
N565_02375 +1338096 FEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGI +1338393
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N565_02375 +1338396 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGIC +1338693
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
N565_02375 +1338696 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1338993
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
N565_02375 +1338996 -LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1339293
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
N565_02375 +1339296 IEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1339593
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
N565_02375 +1339596 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339719
CSUB8521_0178 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 646 gaps: 20 id: 325 positives: 418 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
N755_02445 +1341588 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1341885
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q I+VFEK++E+I++ FH+LDFS EL+N L+IL+ + Y ELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
N755_02445 +1341888 KNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGND +1342185
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
N755_02445 +1342188 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1342485
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
N755_02445 +1342488 GEFDKDIIFICAGVVHPKAIEYLKD--RNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1342785
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
N755_02445 +1342788 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLK +1343085
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
N755_02445 +1343088 AYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +1343385
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
N755_02445 +1343388 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1343523
CSUB8521_0178 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1312.00 bits: 569.77 e-value: 0.000000
length: 642 gaps: 14 id: 330 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q I+V
N755_02435 +1337779 KELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIIV +1338076
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN DAL GI
N755_02435 +1338079 FEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGI +1338376
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER T+EFFN DFG+FD I
N755_02435 +1338379 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITAEFFNHDFGEFDNGIC +1338676
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
N755_02435 +1338679 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1338976
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
N755_02435 +1338979 -LYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1339276
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
N755_02435 +1339279 IEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1339576
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
N755_02435 +1339579 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1339702
CSUB8521_0178 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1306.00 bits: 567.18 e-value: 0.000000
length: 642 gaps: 14 id: 329 positives: 424 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
PJ18_06850 +1298741 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1299038
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
PJ18_06850 +1299041 FEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1299338
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF +FDKDI
PJ18_06850 +1299341 EQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDIC +1299638
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ SV+HPN I YL K F V S Y L HF Y SVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+ TY + +
PJ18_06850 +1299641 FIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEP +1299938
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + T W+MFK LE+ + + LD YNCTEGGARI+G IEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
PJ18_06850 +1299941 IL-TKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1300238
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
PJ18_06850 +1300241 IKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1300538
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ18_06850 +1300541 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1300664
CSUB8521_0178 vs: PJ18_06785 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1344.00 bits: 583.57 e-value: 0.000000
length: 652 gaps: 30 id: 336 positives: 438 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
PJ18_06785 +1284819 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1285116
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
PJ18_06785 +1285119 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1285416
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFN DF
PJ18_06785 +1285419 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNHDF +1285716
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
PJ18_06785 +1285719 GEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1286016
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
PJ18_06785 +1286019 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1286316
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFN
PJ18_06785 +1286319 NEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFN +1286616
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ18_06785 +1286619 KSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1286772
CSUB8521_0178 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD proteinScore: 1346.00 bits: 584.43 e-value: 0.000000
length: 649 gaps: 28 id: 331 positives: 435 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQN
PJ19_07340 +1353002 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1353299
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+N LI+L+T ++I YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN
PJ19_07340 +1353302 KNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGND +1353599
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
PJ19_07340 +1353602 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDF +1353899
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDI+F+ V+HP I YL+ RK++ + R L Y LK+F++L PSVA M+YF+++ L++K+IIFIGQDLAYA +G SHP +Y+
PJ19_07340 +1353902 GEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1354199
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
PJ19_07340 +1354202 YESQMYEHIL-TEAYGGKKEIKTHEFWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1354499
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTL +602
++YK ++IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++
PJ19_07340 +1354502 AYYKVYQSIKHCRDFSK---ILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +1354799
CS..1_0178 +603 LWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +651
LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ19_07340 +1354802 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1354946
CSUB8521_0178 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1346.00 bits: 584.43 e-value: 0.000000
length: 655 gaps: 36 id: 338 positives: 441 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY+ + E + N KYLLYPVLYFYGFGNGIL+KALLQN
PJ19_07420 +1369826 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1370123
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN
PJ19_07420 +1370126 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGND +1370423
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDF
PJ19_07420 +1370426 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDF +1370723
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FDKD++FV S I+P TI YL+KN R F+ R S + NL + Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
PJ19_07420 +1370726 GEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHE +1371023
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + D G + L+YGG + ++ W MF+ L+ +S KN++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
PJ19_07420 +1371026 GHFRR------DKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1371323
CS..1_0178 +503 IELMLKSFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKED +602
E +LK++YK ++IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELNLARIYVLNPK KED
PJ19_07420 +1371326 NEFLLKAYYKVYQSIKHCRDFSK---ILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1371623
CS..1_0178 +603 AFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +657
AFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ19_07420 +1371626 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1371788
CSUB8521_0178 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1323.00 bits: 574.51 e-value: 0.000000
length: 642 gaps: 14 id: 328 positives: 428 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
PJ19_07410 +1366017 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1366314
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN DAL GI
PJ19_07410 +1366317 FEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDPLDALQGI +1366614
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
PJ19_07410 +1366617 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +1366914
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ +Y + +
PJ19_07410 +1366917 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--SYESRRYPH +1367214
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L L+YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
PJ19_07410 +1367217 -LYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1367514
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
PJ19_07410 +1367517 IKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1367814
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
PJ19_07410 +1367817 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1367940
CSUB8521_0178 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factorScore: 1364.00 bits: 592.20 e-value: 0.000000
length: 649 gaps: 25 id: 337 positives: 433 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L + K F+++ G D LDIN NGGGY+ + + EL LN Y DKYLLYPVLYFYGFGNGIL+KALLQN
JJ..7_0374 +331821 KELFNKNIEALSNVFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQN +332118
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+N L+IL+ + YNELCS+ PFF F R+YFL+L YYER++ED+LK N+ + + K+ IL GN
JJ..7_0374 +331521 KNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETFKKVILMHGND +331818
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S DAL GIE ++YNLP +I+ S++ELL KRK S AIIVSTGPSL KQLPLLK+YA KA++FCADSAYPILAK+ I+PDYVLSLERV ETSEFFNNDF
JJ..7_0374 +331221 STDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVLETSEFFNNDF +331518
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
+FDKDI+FVL S HP T YL+KN R FM V Y L F Y SVANMAY +A+ L YK+II IGQDLAY+ DGSSHP E+ +G D
JJ..7_0374 +330921 KEFDKDILFVLKSYAHPHTTKYLQKNNRNFMLVSTYANFINYLKLDDFGYFTMGFSVANMAYHLALLLQYKNIILIGQDLAYSKDGSSHPDEHIFGTLDG +331218
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
+ I Y L+ +YGG + T W +F++ E+ ++ I TYNCTEGGARIEG IEKPF CE LL K+ K F KLE L KQ E +LK
JJ..7_0374 +330621 EKKETISYDLQTTAYGGEGLVYTQEVWNLFRSIFEQDITN----YHIPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLK +330918
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTL +602
++YK ++IK C K +SN +++ N++ + N+ I ++D FK E I L ++ L TQFELNLARIYVLNPK KED FNK++
JJ..7_0374 +330321 AYYKVCQSIKHCRDFSK---ILSNDFENIQSIYLSLNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSI +330618
CS..1_0178 +603 LWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +651
LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L + ++++++
JJ..7_0374 +330021 LWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR +330165
CSUB8521_0178 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factorScore: 1298.00 bits: 563.73 e-value: 0.000000
length: 645 gaps: 20 id: 330 positives: 424 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L + K F+++ G D LDIN L+ N + ELN LN YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVV
JJ..7_0376 +335624 KELFNKNIEALGNIFLKESLKQIKSSKFELILGKDKLDINLKNTSDNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVV +335921
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +IL+ GN DAL GI
JJ..7_0376 +335324 FEKDIEIIWVIFHILDFSNELQNARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSILSHGNDPLDALQGI +335621
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSLIKQLPLLK+YANKA+IFCADSAYPILAKH+IKPDYV LER + T+EFFN DFG+FDKDI
JJ..7_0376 +335024 EQFVYNLPSMITHPSYKELLAKRKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSEFTAEFFNHDFGEFDKDIC +335321
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ SV+HPN I YL K F V S Y L F Y SVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+ TY + +
JJ..7_0376 +334724 FIIKSVVHPNAIHYLNKKTDDFTLVSTYASFINYVKLDDFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEP +335021
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + T W+MFK LE+ + + LD YNCTEGGARIEG IEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
JJ..7_0376 +334424 IL-TKAYGGKGEVKTHHIWLMFKQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKS +334721
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN----------FKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIK +602
I+ C K I N+ L N + N I Q+D E N + L ++ L TQFELNLARIYVLNPK KED FNK++LWIK
JJ..7_0376 +334124 IEHCRDFNDKFIKSYKKIKNSFMSLQNSQENEILVKKIIKNIDKIKTQID---ELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIK +334421
CS..1_0178 +603 EHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +647
EHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
JJ..7_0376 +333824 EHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLNKWMERVRR +333956
CSUB8521_0178 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factorScore: 1315.00 bits: 571.06 e-value: 0.000000
length: 659 gaps: 37 id: 334 positives: 431 coverage: 0.51 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQN
BN.._13180 +1296004 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1296301
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L YYER+++DIL N+ + + K +I++ GN
BN.._13180 +1296304 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNSIVSHGND +1296601
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK+ S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDF
BN.._13180 +1296604 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDF +1296901
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FDKDI+FVL S +HP T YL+KN R FM V S Y L F Y SVANM + +A+ L +K+I+ IGQDLAY DG SH K+Y H
BN.._13180 +1296904 GEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSHTKDYSNLDKHE +1297201
CS..1_0178 +403 GKY----DTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNS +502
G + + Y Q +YGG + ++ W +F+ EK + K ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L
BN.._13180 +1297204 GHFQRDKNKYTTQ---------AYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1297501
CS..1_0178 +503 AKQIELMLKSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPK +602
KQ E +LK++YK ++IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK
BN.._13180 +1297504 NKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYNKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPK +1297801
CS..1_0178 +603 AKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +661
KEDAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++++ + L ++++++++
BN.._13180 +1297804 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR +1297978
CSUB8521_0178 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factorScore: 1330.00 bits: 577.53 e-value: 0.000000
length: 656 gaps: 40 id: 333 positives: 434 coverage: 0.51 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQN
BN.._13200 +1299846 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1300143
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L YYER+++DIL N+ + + K +I++ GN
BN.._13200 +1300146 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNSIVSHGND +1300443
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK+ S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
BN.._13200 +1300446 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1300743
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIFV V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L++K+IIFIGQDLAYA +G SHP +Y+ T
BN.._13200 +1300746 GEFDKDIIFVCAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--T +1301043
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ +DITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
BN.._13200 +1301046 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1301343
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNI--------------IEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKE +602
++YK ++IK C K LSND NN +NI I ++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KE
BN.._13200 +1301346 AYYKVYQSIKHCRDFSK----------ILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKE +1301643
CS..1_0178 +603 DAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +658
DAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++++ + L ++++++++
BN.._13200 +1301646 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR +1301811
CSUB8521_0178 vs: M635_02360 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1950bp / 650aa PV: No
Function: PseD proteinScore: 1320.00 bits: 573.22 e-value: 0.000000
length: 651 gaps: 29 id: 338 positives: 433 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
M635_02360 +444758 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +445055
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL+T +I YNELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +IL+ GN DAL GI
M635_02360 +445058 FEKDIEIIWVIFHILDFSNELQSARLMILNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDSILSHGNDPLDALQGI +445355
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
M635_02360 +445358 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDIV +445655
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKY----D +402
FVL S +HP T YL+KN R FM V S Y L F Y SVANM + +A+ L +K+I+ IGQDLAYA DG SH K+Y H G + +
M635_02360 +445658 FVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKDYSNLDKHEGHFQRDKN +445955
CS..1_0178 +403 TYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELML +502
Y Q +YG + ++ W +F+ E+ ++ AK ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +L
M635_02360 +445958 KYTTQ---------AYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLL +446255
CS..1_0178 +503 KSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +602
K++YK ++IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK
M635_02360 +446258 KAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNK +446555
CS..1_0178 +603 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +653
++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
M635_02360 +446558 SILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +446708
CSUB8521_0178 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD proteinScore: 1293.00 bits: 561.57 e-value: 0.000000
length: 569 gaps: 20 id: 300 positives: 397 coverage: 0.51 query coverage 0.47
CS..1_0178 +75 PVLYFYGFGNGILYKALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL +174
PVLYFYGFGNGIL+KALLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L
M635_02285 +431982 PVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVL +432279
CS..1_0178 +175 KTNQNMQKYIKQTILTKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKP +274
+ N+ + + K +I++ GN DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKP
M635_02285 +432282 ELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKP +432579
CS..1_0178 +275 DYVLSLERVKETSEffnndfgkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDL +374
DYV LER + T+EFFN DFG+FDKD++FV V+HP I YL+ RK++ R L Y LK+F++L PSVA M+YF+++ L++K+IIFIGQDL
M635_02285 +432582 DYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDL +432879
CS..1_0178 +375 AYANDGSSHPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQ +474
AYA +G SHP +Y+ Y Q ++ L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+
M635_02285 +432882 AYAENGNSHPDDYQNSA--NYENQMYEHIL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLN +433179
CS..1_0178 +475 KHFTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELN +574
K F KLE L KQ E +LK++YK ++IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELN
M635_02285 +433182 KPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSK---ILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELN +433479
CS..1_0178 +575 LARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +643
LARIYVLNPK KEDAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
M635_02285 +433482 LARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +433686
CSUB8521_0178 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD proteinScore: 1323.00 bits: 574.51 e-value: 0.000000
length: 654 gaps: 44 id: 342 positives: 438 coverage: 0.53 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
M635_02370 +448576 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +448873
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL+TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
M635_02370 +448876 FEKDIEIIWVIFHILDFSSELQSARLMILNTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +449173
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH+IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
M635_02370 +449176 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTSEFFNNDFGEFDKDIV +449473
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
FV V+HP TI YL+ + F+ Q++L+ Y NLK F Y SVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H G +
M635_02370 +449476 FVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAIGFSVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHF----- +449773
CS..1_0178 +403 QEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSF +502
+ D G + L+YGG ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++
M635_02370 +449776 -QRDKGKFQCLAYGGNGKAESSEVWTMFRFFLQDTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAY +450073
CS..1_0178 +503 YKTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNI--------------IEQLDTFKEKINNELILRSVIDSLNT---QFELNLARIYVLNPKAKEDA +602
YK ++IK C K LSND NN +NI I ++D FK K+ N ++ + + L T QFELNLARIYVLNPK KEDA
M635_02370 +450076 YKVYQSIKHCRDFSK----------ILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDA +450373
CS..1_0178 +603 FNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +656
FNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
M635_02370 +450376 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +450535
CSUB8521_0178 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical proteinScore: 1335.00 bits: 579.69 e-value: 0.000000
length: 652 gaps: 30 id: 332 positives: 428 coverage: 0.51 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
UC78_1278 +1249165 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1249462
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L +YYER++EDIL N+ + + K IL GN
UC78_1278 +1249465 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNIILRNGND +1249762
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDF
UC78_1278 +1249765 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDF +1250062
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FDK+++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY + L K+IIFIGQDLAYA DG SH K+Y H
UC78_1278 +1250065 GEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1250362
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
UC78_1278 +1250365 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1250662
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KED FN
UC78_1278 +1250665 NEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFN +1250962
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K +LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
UC78_1278 +1250965 KNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1251118
CSUB8521_0178 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical proteinScore: 1331.00 bits: 577.96 e-value: 0.000000
length: 656 gaps: 34 id: 337 positives: 438 coverage: 0.51 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQN
UC78_1276 +1245332 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1245629
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+TS +DI + CS+ PFF F R+YFL+L +YYER++EDIL N+ + + K +I++ GN
UC78_1276 +1245632 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENFKNSIVSYGND +1245929
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDF
UC78_1276 +1245932 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDF +1246229
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FDK+++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY + L K+IIFIGQDLAYA DG SH K+Y H
UC78_1276 +1246232 GEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1246529
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
UC78_1276 +1246532 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1246829
CS..1_0178 +503 IELMLKSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKE +602
E +LK++YK K+I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KE
UC78_1276 +1246832 NEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKE +1247129
CS..1_0178 +603 DAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +658
D FNK +LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
UC78_1276 +1247132 DVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1247297
CSUB8521_0178 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factorScore: 1316.00 bits: 571.49 e-value: 0.000000
length: 644 gaps: 19 id: 338 positives: 436 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLY YGFGNGIL+KALLQNKN Q IVV
CJ.._06665 +1261532 KELFNKNIEALGNILLKESLKKIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGILFKALLQNKNHQHIVV +1261829
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN DAL GI
CJ.._06665 +1261832 FEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGI +1262129
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
CJ.._06665 +1262132 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDIM +1262429
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
F++ SV HP TI YL+KN R F+ V S +Y L +F Y SVANM+Y + L+YK+II IGQDLAYA DG SH K+Y H G +
CJ.._06665 +1262432 FIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKDYKNLDKHEGHF----- +1262729
CS..1_0178 +403 QEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSF +502
+ D G + L+YGG + ++ W MF+ E + Y + + +ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++
CJ.._06665 +1262732 -QRDKGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAY +1263029
CS..1_0178 +503 YKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKE +602
YK K+I+ C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKE
CJ.._06665 +1263032 YKVCKSIEHCRDFSKILSNDFKKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1263329
CS..1_0178 +603 HLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +646
HLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJ.._06665 +1263332 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1263461
CSUB8521_0178 vs: CJH_06700 in F38011 (Campylobacter jejuni subsp. jejuni F38011, complete genome.)
Gene length: 1962bp / 654aa PV: Yes
Function: PseD proteinScore: 1312.00 bits: 569.77 e-value: 0.000000
length: 650 gaps: 16 id: 337 positives: 433 coverage: 0.52 query coverage 0.52
CS..1_0178 +2 NKN---IFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQ +101
NKN +F KN +L N LKEKL ++++ G D LDIN LY +S+ EL+ L YN+KYLLYPVLYFYGFGNGIL+KALL+NK +
CJH_06700 +1267872 NKNQTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLDINLKDTKNHTFLYQDSIKELDIMLKTYNEKYLLYPVLYFYGFGNGILFKALLKNKHHK +1268169
CS..1_0178 +102 KIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDA +201
+V+FEKELE+I + FHLLDFS+EL+ L+ILD ++ Y +LCSTSPFF F R YFL+L DYYE+ QE+IL N N+ K TIL KGN +DA
CJH_06700 +1268172 HLVIFEKELEIIKIMFHLLDFSQELEENRLLILDVNSLEFQDYYDLCSTSPFFEFSRTYFLELSSDYYEKDQEEILNLNNNLMDRFKNTILLKGNDPKDA +1268469
CS..1_0178 +202 LMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfd +301
L GIE IYNLP +++ ++ LL +R+N S AIIVSTGPSL KQL LKQYANKA+I AD++YPILAKH IKPDYVLSLER+ TS+FF+N+FG FD
CJH_06700 +1268472 LQGIEQLIYNLPVLLTHAPYQNLLKQRENLSDTAIIVSTGPSLAKQLDTLKQYANKATIIAADASYPILAKHGIKPDYVLSLERILSTSKFFDNNFGDFD +1268769
CS..1_0178 +302 kdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQ +401
KDI+F+ T + HP TI L+ N R F+ + Y LK+F + SVAN+AY +A+ L +K+IIFIGQDLAYA DGSSHP E+ YG YD +
CJH_06700 +1268772 KDILFITTHLTHPQTIKKLKNNNRNFLLSYKGSEFIYYLKLKQFGEFVEGHSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSHPSEHIYGNYDAVDKN +1269069
CS..1_0178 +402 EIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYK +501
+I Y LK L+YGG + T W +F+ LEK +S K + TTYNCTEGGARIEG IEKPFK++CE LL ++ +K F K+E LN KQ EL+LKS+YK
CJH_06700 +1269072 KITYHLKTLAYGGKNMVYTKEAWNVFRGILEKHISQTKRLKLCTTYNCTEGGARIEGAIEKPFKELCETLLKEDLKKPFPKVEALNKDKQDELLLKSYYK +1269369
CS..1_0178 +502 TRKAIKIC-EYLEKECAFISNTLHFLSN-----DENNFKNI----IEQLDTFKEKI---NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLL +601
K+IK C ++ +K L SN + N K I I+++D K K+ N L L ++ L TQFELNLARIYVLNPK ED++NK+LL
CJH_06700 +1269372 IYKSIKHCKDFSDKLLKSYNHILESFSNLNLISNLNEGKKILNYLIQEIDKIKFKLEDGKNMLDLYEILGPLLTQFELNLARIYVLNPKTPEDSYNKSLL +1269669
CS..1_0178 +602 WIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKKVK +651
W+KEH+E M+ ++ KA + L +NI LE EL +NL +Y +KIK K
CJH_06700 +1269672 WVKEHIEFFDMVYEYIKAQEKALIENITPLENELTQRNLEKYKRKIKNAK +1269819
CSUB8521_0178 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factorScore: 1353.00 bits: 587.45 e-value: 0.000000
length: 652 gaps: 30 id: 338 positives: 439 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
CJSA_1271 +1268731 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1269028
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
CJSA_1271 +1269031 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1269328
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN DF
CJSA_1271 +1269331 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDF +1269628
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
CJSA_1271 +1269631 GEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1269928
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
CJSA_1271 +1269931 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1270228
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFN
CJSA_1271 +1270231 NEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFN +1270528
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJSA_1271 +1270531 KSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1270684
CSUB8521_0178 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factorScore: 1353.00 bits: 587.45 e-value: 0.000000
length: 652 gaps: 30 id: 338 positives: 439 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
CJSA_1256 +1251001 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1251298
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
CJSA_1256 +1251301 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1251598
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN DF
CJSA_1256 +1251601 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDF +1251898
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
CJSA_1256 +1251901 GEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1252198
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
CJSA_1256 +1252201 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1252498
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFN
CJSA_1256 +1252501 NEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFN +1252798
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJSA_1256 +1252801 KSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1252954
CSUB8521_0178 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD proteinScore: 1306.00 bits: 567.18 e-value: 0.000000
length: 642 gaps: 14 id: 329 positives: 424 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
CJSA_1269 +1264922 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1265219
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
CJSA_1269 +1265222 FEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1265519
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF +FDKDI
CJSA_1269 +1265522 EQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDIC +1265819
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ SV+HPN I YL K F V S Y L HF Y SVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+ TY + +
CJSA_1269 +1265822 FIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEP +1266119
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + T W+MFK LE+ + + LD YNCTEGGARI+G IEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
CJSA_1269 +1266122 IL-TKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1266419
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
CJSA_1269 +1266422 IKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1266719
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJSA_1269 +1266722 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1266845
CSUB8521_0178 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function familyScore: 1104.00 bits: 480.04 e-value: 0.000000
length: 499 gaps: 7 id: 258 positives: 332 coverage: 0.54 query coverage 0.40
CS..1_0178 +141 YNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPS +240
+ CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPS
IC..1_1265 +1288420 FSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPS +1288717
CS..1_0178 +241 LIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLK +340
L KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV ETSEFFNNDF +FDKD+ FVL S HP T YL+KN R FM V S Y L
IC..1_1265 +1288720 LTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLD +1289017
CS..1_0178 +341 HFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLD +440
F Y SVA MAY++++ L +K+IIFIGQDLAYA +G SHP E+ +G D + I Y L+ +YGG + T W +F+ E+ + + LD
IC..1_1265 +1289020 DFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLD +1289317
CS..1_0178 +441 ITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQ +540
YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+IK C + L + I L E + IE+
IC..1_1265 +1289320 TKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEK +1289617
CS..1_0178 +541 LDTFKEKINN-ELI--LRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIK +639
+D FK K+ + E + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L +++++++
IC..1_1265 +1289620 IDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE +1289914
CSUB8521_0178 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD proteinScore: 1308.00 bits: 568.04 e-value: 0.000000
length: 642 gaps: 14 id: 328 positives: 427 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
ER.._01444 +1370985 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1371282
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L+IL TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN DAL GI
ER.._01444 +1371285 FEKDIEIIWIMFHILDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYSIVSHGNDPLDALQGI +1371582
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+ +LL KRKN S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER + T+EFFN DFG+FD+++
ER.._01444 +1371585 EQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDREVC +1371882
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ SV+HPN I YL K F V S Y L HF Y SVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+ TY + +
ER.._01444 +1371885 FIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEP +1372182
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + T W+MFK LE+ + + LD YNCTEGGARI+G IEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
ER.._01444 +1372185 IL-TKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1372482
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
ER.._01444 +1372485 IKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1372782
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
ER.._01444 +1372785 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1372908
CSUB8521_0178 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factorScore: 1350.00 bits: 586.16 e-value: 0.000000
length: 652 gaps: 30 id: 338 positives: 440 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
ER.._01446 +1374794 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1375091
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
ER.._01446 +1375094 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1375391
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDF
ER.._01446 +1375394 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDF +1375691
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
ER.._01446 +1375694 GEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1375991
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
ER.._01446 +1375994 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1376291
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFN
ER.._01446 +1376294 NEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFN +1376591
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
ER.._01446 +1376594 KSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1376747
CSUB8521_0178 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factorScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 646 gaps: 20 id: 326 positives: 430 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
ER.._01430 +1357070 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1357367
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
ER.._01430 +1357370 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1357667
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+ +LL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADS+YPILAKHDIKPDYV LER + T+EFFN DF
ER.._01430 +1357670 STDTLQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSEFTAEFFNHDF +1357967
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FD+DI+F+ V+HP I YL+ R + Q++L L Y NLK F Y SVA M ++A L++K+IIFIGQDLAYA +G SHP +Y+
ER.._01430 +1357970 GEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1358267
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YG + + T + WI+FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
ER.._01430 +1358270 YESQMYEHIL-TKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1358567
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFNK++LWI
ER.._01430 +1358570 AYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSILWI +1358867
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
ER.._01430 +1358870 KEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1359005
CSUB8521_0178 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factorScore: 1332.00 bits: 578.39 e-value: 0.000000
length: 648 gaps: 26 id: 331 positives: 434 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHN-GGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQNKNRQ +102
K +F KN +AL N LKE L + + F+++ G D LDIN N GGGY + E + N KYLLYPVLYFYGFGNG+L+KALLQNKN Q
H730_07620 +1368486 KELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQ +1368783
CS..1_0178 +103 KIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDA +202
IVVFEK++E+I++ FH+LDFS EL+ L+IL+TS +DI ++ CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DA
H730_07620 +1368786 HIVVFEKDIEIIWIMFHILDFSSELQSARLMILETSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDA +1369083
CS..1_0178 +203 LMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfd +302
L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER+ T+EFFNNDFG+FD
H730_07620 +1369086 LQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERIPLTAEFFNNDFGEFD +1369383
CS..1_0178 +303 kdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYD +402
KDI+FV+ S ++P TI YL+KN R F+ R S + NL + Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H G +
H730_07620 +1369386 KDILFVIKSWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHFR +1369683
CS..1_0178 +403 TYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELM +502
D G + L+YGG + ++ W MF+ L+ +S KN++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +
H730_07620 +1369686 R------DKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +1369983
CS..1_0178 +503 LKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFNKTLL +602
LK++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFNK++L
H730_07620 +1369986 LKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFNKSIL +1370283
CS..1_0178 +603 WIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +650
WIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
H730_07620 +1370286 WIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +1370427
CSUB8521_0178 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factorScore: 1339.00 bits: 581.41 e-value: 0.000000
length: 641 gaps: 20 id: 337 positives: 435 coverage: 0.53 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVV
CJE1524 +1416279 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVV +1416576
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
CJE1524 +1416579 FEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGI +1416876
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFNNDFG+FDKDI+
CJE1524 +1416879 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDFGEFDKDIV +1417176
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
FV + V+HP I YL+ RK++ + R L Y LK+F++L PSVA M+YF+++ L++K+II IGQDLAYA +G SHP +Y+ Y Q ++
CJE1524 +1417179 FVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSHPDDYQNSA--NYESQMYEH +1417476
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
CJE1524 +1417479 IL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1417776
CS..1_0178 +503 IKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLE +602
IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHLE
CJE1524 +1417779 IKHCRDFSK---ILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLE +1418076
CS..1_0178 +603 WILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +643
+ ++ H KA + L KNI+ LE++L+ + L ++++++++
CJE1524 +1418079 FMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1418199
CSUB8521_0178 vs: CJE1522 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: motility accessory factorScore: 1305.00 bits: 566.75 e-value: 0.000000
length: 647 gaps: 21 id: 331 positives: 428 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVV
CJE1522 +1412461 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVV +1412758
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
CJE1522 +1412761 FEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGI +1413058
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFNNDFG+FDKDI+
CJE1522 +1413061 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDFGEFDKDIV +1413358
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
F++ SV HP TI YL+KN R F+ V S +Y L +F Y SVA M + + + L YK+II IGQDLAYA DG +H + + H G Y+
CJE1522 +1413361 FIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYE---- +1413658
CS..1_0178 +403 QEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFY +502
+++D +YGG + ++ W +F+ EK + K ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++Y
CJE1522 +1413661 RDLD-RFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYY +1413958
CS..1_0178 +503 KTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLW +602
K ++IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LW
CJE1522 +1413961 KVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILW +1414258
CS..1_0178 +603 IKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +649
IKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJE1522 +1414261 IKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1414399
CSUB8521_0178 vs: CjjRM1285_1333 in RM1285 (Campylobacter jejuni subsp. jejuni strain RM1285, complete genome.)
Gene length: 1968bp / 656aa PV: No
Function: motility accessory factor (function unknown)Score: 1280.00 bits: 555.96 e-value: 0.000000
length: 646 gaps: 25 id: 336 positives: 430 coverage: 0.51 query coverage 0.52
CS..1_0178 +5 IFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFE +104
+F +N AL NT LKE L + K F+++ G D LDIN LY N++ ELN LN+YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVVFE
Cj..5_1333 +1294863 LFNRNINALNNTVLKESLKQIKSSKFELILGKDNLDINLKNTSDNTFLYKNAIDELNSMLNIYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFE +1295160
CS..1_0178 +105 KELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIEN +204
KELE+I + HL+DFS+ELK LIILD ++ Y +LCS+ PFF F R YFL+L DYYE+ ++ ILK N+++ + K +IL GN S+D L GIE
Cj..5_1333 +1295163 KELEIIKIMLHLMDFSQELKENKLIILDINSLEFQDYYDLCSSNPFFQFSRTYFLELSSDYYEKDKKYILKLNKDLIEKFKNSILLYGNDSKDNLQGIEQ +1295460
CS..1_0178 +205 YIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdIIFV +304
IYNLP +I+ ++++ L KR+N S AIIVSTGPSL KQLP+LK+YANKA+I ADS+YPILAKHDIKPDYV+SLER+ TSEFFNN+FG FDKDI+F+
Cj..5_1333 +1295463 LIYNLPKMITHTAYQDFLKKRENLSDTAIIVSTGPSLTKQLPILKKYANKATIISADSSYPILAKHDIKPDYVVSLERILLTSEFFNNNFGDFDKDILFI +1295760
CS..1_0178 +305 LTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNPQE +404
T + HP TI L KN R FM V+R Y LK F L SVAN+AY +A+ L +K+IIFIGQDLAY+NDG SH K+Y H G Y E
Cj..5_1333 +1295763 TTHLTHPQTIKNLEKNNRNFMLVHRSSEFTTYLKLKKFGELCEGHSVANVAYGLAVFLRHKNIIFIGQDLAYSNDGFSHTKDYRNLNKHEGHY------E +1296060
CS..1_0178 +405 IDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYK +504
D+G + ++YGG F+ ++ W +F+ LEK++ A + TYNCTEGGARIEG IEKPFK+ CE LL K F K++ L S KQ EL+LK +YK
Cj..5_1333 +1296063 RDFGHFRTIAYGGVGFVESSFYWSLFRFFLEKRIHEANQLELCNTYNCTEGGARIEGAIEKPFKKTCEALLKNNLNKNFPKIDPLSSHKQNELLLKCYYK +1296360
CS..1_0178 +505 TRKAIKICEYLEKECAFISN-------TLHFLSN-DENN--FKNIIEQLDTFKEKI---NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLL +604
K+I C+ +KE N L +SN DE +I+++D K K+ N L L ++ +L QFELNLARI+VLNPK ED++ K+LL
Cj..5_1333 +1296363 IIKSINHCKNFKKELLKSYNHIQESFSNLNLISNLDEGKEILNYLIQEIDKIKFKLEDRKNMLDLCEILKTLLVQFELNLARIFVLNPKTSEDSYKKSLL +1296660
CS..1_0178 +605 WIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKI +650
W+KEH+E M+ H +A + L KNII LE EL +NL +Y +KI
Cj..5_1333 +1296663 WVKEHIEFFKMIYTHIEAQEKALIKNIIPLENELTQRNLEKYKRKI +1296798
CSUB8521_0178 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD proteinScore: 1341.00 bits: 582.28 e-value: 0.000000
length: 642 gaps: 18 id: 330 positives: 424 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHN-GGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQNKNRQ +102
K +F KN +AL N LKE L K F+++ G D LDIN N GGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQNKN Q
AX.._06575 +1262462 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDNSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQ +1262759
CS..1_0178 +103 KIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDA +202
IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DA
AX.._06575 +1262762 HIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDA +1263059
CS..1_0178 +203 LMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfd +302
L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD
AX.._06575 +1263062 LQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFD +1263359
CS..1_0178 +303 kdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQ +402
KDI+FV V+HP I YL+ RK++ R L Y LK+F++L PSVA M+YF+++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q
AX.._06575 +1263362 KDILFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQ +1263659
CS..1_0178 +403 EIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYK +502
+ L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK
AX.._06575 +1263662 MYKHIL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYK +1263959
CS..1_0178 +503 TRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
++IK C + L + I L EN+ I ++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
AX.._06575 +1263962 VYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1264259
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
AX.._06575 +1264262 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1264385
CSUB8521_0178 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD proteinScore: 1310.00 bits: 568.90 e-value: 0.000000
length: 644 gaps: 24 id: 336 positives: 434 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
AX.._06490 +1245641 KELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1245938
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
AX.._06490 +1245941 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1246238
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
AX.._06490 +1246241 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDIL +1246538
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
FV V+HP TI YL+ + F+ Q++L+ Y NLK F Y SVA MAY A L +K+IIFIGQDLAYA DG SH K+Y H G +
AX.._06490 +1246541 FVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHF----- +1246838
CS..1_0178 +403 QEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSF +502
+ D G + L+YGG ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++
AX.._06490 +1246841 -QRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAY +1247138
CS..1_0178 +503 YKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNT---QFELNLARIYVLNPKAKEDAFNKTLLWIKE +602
YK ++IK C + L + I L EN+ I ++D FK K+ + ++ + + L T QFELNLARIYVLNPK KEDAFNK++LWIKE
AX.._06490 +1247141 YKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKE +1247438
CS..1_0178 +603 HLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +646
HLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
AX.._06490 +1247441 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1247570
CSUB8521_0178 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD proteinScore: 1317.00 bits: 571.92 e-value: 0.000000
length: 651 gaps: 29 id: 337 positives: 430 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
AX.._06565 +1258644 KELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1258941
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
AX.._06565 +1258944 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1259241
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
AX.._06565 +1259244 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDIL +1259541
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKY----D +402
FVL S +HP T YL+KN R FM V S Y L F Y SVANM + +A+ L +K+I+ IGQDLAYA DG SH K+Y H G + +
AX.._06565 +1259544 FVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSHTKDYSNLDKHEGHFQRDKN +1259841
CS..1_0178 +403 TYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELML +502
Y Q +YG + ++ W +F+ E+ ++ AK ITTYNCTEGGARIEG IEKPF CE LL K+ K F KLE L KQ E +L
AX.._06565 +1259844 KYTTQ---------AYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLL +1260141
CS..1_0178 +503 KSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +602
K++YK ++IK C K I N+ L N + N K II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK
AX.._06565 +1260144 KAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLNPKTKEDAFNK +1260441
CS..1_0178 +603 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +653
++LWIKEHLE + ++ +H KA + L KNI+ LE++L+ + L +++++++K
AX.._06565 +1260444 SILWIKEHLEFMELVYEHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +1260594
CSUB8521_0178 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation dataScore: 704.00 bits: 307.50 e-value: 0.000000
length: 275 gaps: 0 id: 167 positives: 204 coverage: 0.53 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVV
CJS3_1430 +1321560 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVV +1321857
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
CJS3_1430 +1321860 FEKDIEIIWIMFHILDFSHELQNSRLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGI +1322157
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYV +277
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV
CJS3_1430 +1322160 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1322382
Score: 645.00 bits: 282.05 e-value: 0.000000
length: 367 gaps: 20 id: 173 positives: 236 coverage: 0.53 query coverage 0.53
CS..1_0178 +277 VLSLERVKETSEffnndfgkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAY +376
L LER + T+EFFNNDFG+FDKDI+FV + V+HP I YL+ RK++ + R L Y LK+F++L PSVA M+YF+++ L++K+II IGQDLAY
CJS3_1430 +1322381 CLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAY +1322678
CS..1_0178 +377 ANDGSSHPKEYHYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKH +476
A +G SHP +Y+ Y Q ++ L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K
CJS3_1430 +1322681 AENGNSHPDDYQNSA--NYESQMYEHIL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKP +1322978
CS..1_0178 +477 FTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLEKECAFISN------TLHFLSNDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLA +576
F KLE L KQ E +LK++YK K+IK C K +SN +++ N++ + N+ IE++D FK E I L ++ L TQFELNLA
CJS3_1430 +1322981 FEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSK---ILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLA +1323278
CS..1_0178 +577 RIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +643
RIYVLNPK KEDAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJS3_1430 +1323281 RIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1323479
CSUB8521_0178 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation dataScore: 697.00 bits: 304.48 e-value: 0.000000
length: 275 gaps: 0 id: 165 positives: 200 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + E N LN YNDKYLLYPVLYFYGFGNGILYKALLQNKN Q IVV
CJS3_1427 +1317743 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGILYKALLQNKNHQHIVV +1318040
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
CJS3_1427 +1318043 FEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGNDPLDALQGI +1318340
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYV +277
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV
CJS3_1427 +1318343 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1318565
Score: 604.00 bits: 264.36 e-value: 0.000000
length: 373 gaps: 21 id: 165 positives: 227 coverage: 0.51 query coverage 0.51
CS..1_0178 +277 VLSLERVKETSEffnndfgkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAY +376
L LER + +E FNNDFG+FDKDI+F++ SV HP TI YL+KN R F+ V S +Y L +F Y SVA M + + + L YK+II IGQDLAY
CJS3_1427 +1318564 CLYLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAY +1318861
CS..1_0178 +377 ANDGSSHPKEY-----HYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIK +476
A DG +H + + H G Y+ +++D +YGG + ++ W +F+ EK + K ITTYNCTEGGARIEGTIEKPF CE LL K
CJS3_1427 +1318864 AKDGQTHSQGFIHANLHNGDYE----RDLD-RFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDK +1319161
CS..1_0178 +477 EPQKHFTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQ +576
+ K F KLE L KQ E +LK++YK ++IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQ
CJS3_1427 +1319164 DLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQ +1319461
CS..1_0178 +577 FELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +649
FELNLARIYVLNPK KEDAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
CJS3_1427 +1319464 FELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1319680
CSUB8521_0178 vs: QZ67_01453 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1512bp / 504aa PV: Yes
Function: hypothetical proteinScore: 1123.00 bits: 488.24 e-value: 0.000000
length: 515 gaps: 24 id: 280 positives: 352 coverage: 0.56 query coverage 0.44
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
QZ67_01453 +1322616 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1322913
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
QZ67_01453 +1322916 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1323213
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN DF
QZ67_01453 +1323216 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDF +1323513
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
QZ67_01453 +1323516 GEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1323813
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
QZ67_01453 +1323816 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1324113
CS..1_0178 +503 IELML-KSFYKTRKA +517
E +L ++YK ++
QZ67_01453 +1324116 NEFLL*MAYYKVYQS +1324158
CSUB8521_0178 vs: QZ67_01469 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical proteinScore: 1310.00 bits: 568.90 e-value: 0.000000
length: 642 gaps: 14 id: 329 positives: 424 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNG+L+KALLQNKN Q IVV
QZ67_01469 +1336544 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQNKNHQHIVV +1336841
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN S D L GI
QZ67_01469 +1336844 FEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGNDSTDTLQGI +1337141
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKH IKPDYV LER + T+EFFN DF +FDKDI
QZ67_01469 +1337144 EQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHGIKPDYVCMLERTEITAEFFNHDFREFDKDIC +1337441
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ SV+HPN I YL K F V S Y L HF Y SVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+ TY + +
QZ67_01469 +1337444 FIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEP +1337741
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + T W+MFK LE+ + + LD YNCTEGGARI+G IEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
QZ67_01469 +1337744 IL-TKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +1338041
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
QZ67_01469 +1338044 IKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1338341
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
QZ67_01469 +1338344 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1338467
CSUB8521_0178 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical proteinScore: 1353.00 bits: 587.45 e-value: 0.000000
length: 652 gaps: 30 id: 338 positives: 439 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + + EL LN YNDKYLLYPVLYFYGFGNG+L+KALLQN
QZ67_01471 +1340353 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVLFKALLQN +1340650
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L+IL+ + YNELCS PFF F R+YFL+L YYER++ED+L+ N+ + +Y K +I++ GN
QZ67_01471 +1340653 KNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDSIISHGND +1340950
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YAN A+IFCADSAYPILAKHDIKPDYVLSLER+ TSEFFN DF
QZ67_01471 +1340953 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTSEFFNHDF +1341250
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R FM + R K N ++ Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
QZ67_01471 +1341253 GEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYSNLDKHE +1341550
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
QZ67_01471 +1341553 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1341850
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVID---SLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK ++IK C + L + I L E + IE++D FK K+ + ++ + D SL QFELNLARIYVLNPK KEDAFN
QZ67_01471 +1341853 NEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDAFN +1342150
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
QZ67_01471 +1342153 KSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1342306
CSUB8521_0178 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factorScore: 1327.00 bits: 576.24 e-value: 0.000000
length: 649 gaps: 26 id: 331 positives: 432 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
N149_1281 +1278091 KEFFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1278388
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+N L++L T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN
N149_1281 +1278391 KNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLSTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSHGND +1278688
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
+DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
N149_1281 +1278691 PKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +1278988
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDI+FV V+HP TI YL+ + F+ Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
N149_1281 +1278991 GEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +1279288
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L I +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
N149_1281 +1279291 YESQMYEHILTI-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +1279588
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISNTLH-----FLS-NDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTL +602
++YK ++I+ C K +SN +LS N++ + N+ IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++
N149_1281 +1279591 AYYKVCQSIEHCRDFSK---ILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSI +1279888
CS..1_0178 +603 LWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +651
LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
N149_1281 +1279891 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1280035
CSUB8521_0178 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factorScore: 1320.00 bits: 573.22 e-value: 0.000000
length: 644 gaps: 24 id: 338 positives: 434 coverage: 0.53 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
N149_1298 +1294885 KELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1295182
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
N149_1298 +1295185 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1295482
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDFG+FDKDI+
N149_1298 +1295485 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDFGEFDKDIV +1295782
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
FV V+HP TI YL+ + F+ Q++L+ Y NLK F Y SVA MAY A L +K+IIFIGQDLAYA DG SH K+Y H G +
N149_1298 +1295785 FVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHF----- +1296082
CS..1_0178 +403 QEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSF +502
+ D G + L+YGG ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++
N149_1298 +1296085 -QRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAY +1296382
CS..1_0178 +503 YKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNT---QFELNLARIYVLNPKAKEDAFNKTLLWIKE +602
YK K+IK C + L + I L EN+ I ++D FK K+ N ++ + + L T QFELNLARIYVLNPK KEDAFNK++LWIKE
N149_1298 +1296385 YKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKEDAFNKSILWIKE +1296682
CS..1_0178 +603 HLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +646
HLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
N149_1298 +1296685 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1296814
CSUB8521_0178 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factorScore: 1310.00 bits: 568.90 e-value: 0.000000
length: 642 gaps: 14 id: 328 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDK+LLYPVLYFYGFGNGIL+KALLQNKN Q IVV
N149_1296 +1291076 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1291373
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
N149_1296 +1291376 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1291673
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
N149_1296 +1291676 EQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +1291973
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q +
N149_1296 +1291976 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYKH +1292273
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
N149_1296 +1292276 IL-TEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1292573
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
N149_1296 +1292576 IKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1292873
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
N149_1296 +1292876 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1292999
CSUB8521_0178 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD proteinScore: 1302.00 bits: 565.45 e-value: 0.000000
length: 644 gaps: 24 id: 332 positives: 433 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN ++L N LKE L + F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
AB.._08255 +1558380 KELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1558677
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
AB.._08255 +1558680 FEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1558977
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDFG+FDKDI+
AB.._08255 +1558980 EQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKDIV +1559277
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
FV V+HP TI YL+ + F+ Q++L+ Y NLK F Y SVA MAY A L +K+IIFIGQDLAYA DG SH K+Y H G +
AB.._08255 +1559280 FVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSHTKDYKNLDKHEGHF----- +1559577
CS..1_0178 +403 QEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSF +502
+ D G + L+YGG ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++
AB.._08255 +1559580 -QRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAY +1559877
CS..1_0178 +503 YKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKE +602
YK ++IK C + L + I L E + I+++D FK K+ N ++ ++ L QFELNLA+IYVLNPK KEDAFNK++LWIKE
AB.._08255 +1559880 YKVYQSIKHCRDFSKILSNDFEKIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKE +1560177
CS..1_0178 +603 HLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +646
HLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
AB.._08255 +1560180 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1560309
CSUB8521_0178 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1303.00 bits: 565.89 e-value: 0.000000
length: 642 gaps: 14 id: 327 positives: 425 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN ++L N LKE L + F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
AB.._08325 +1571377 KELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1571674
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
AB.._08325 +1571677 FEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +1571974
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
AB.._08325 +1571977 EQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +1572274
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q ++
AB.._08325 +1572277 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEH +1572574
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
AB.._08325 +1572577 IL-TEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1572874
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
AB.._08325 +1572877 IKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1573174
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L +++++++K
AB.._08325 +1573177 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +1573300
CSUB8521_0178 vs: VC76_06695 in FB1 (Campylobacter coli strain FB1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical proteinScore: 1279.00 bits: 555.53 e-value: 0.000000
length: 642 gaps: 23 id: 332 positives: 432 coverage: 0.51 query coverage 0.52
CS..1_0178 +5 IFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFE +104
IF++N AL N L++KL K F++L G D LDIN LY N++ ELN L +YNDKYLLYPVLYFYGFGNGIL+KALLQNK Q IV+FE
VC76_06695 +1299969 IFKQNINALVNEILRKKLQKIKNTKFELLLGNDNLDINLRNTKDNTLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGILFKALLQNKHHQHIVIFE +1300266
CS..1_0178 +105 KELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIEN +204
++E++++ FHLLDFS E+K +II DT ++I Y L T PF FLR+YFL+L YYE+ +DI K N+N+ +Y K+ ++ GN DAL GIE
VC76_06695 +1300269 NDIEILWIMFHLLDFSCEIKKNKIIIFDTNEINIKDYEMLTLTKPFISFLRIYFLELSSSYYEKMNKDIQKVNKNLMEYFKKAMIGYGNDPLDALQGIEQ +1300566
CS..1_0178 +205 YIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdIIFV +304
+++NLP +++ S+KEL+ KRKN SK AIIVSTGPSLIKQLPLLK+Y NKA+IFCADSAYPILAKH+IKPDYV LER T+EFFN DF FDKDI+F+
VC76_06695 +1300569 FVHNLPKMLTHSSYKELIKKRKNLSKTAIIVSTGPSLIKQLPLLKKYQNKATIFCADSAYPILAKHNIKPDYVCMLERASLTAEFFNHDFKDFDKDIVFI +1300866
CS..1_0178 +305 LTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDYGL +404
S+IHPN ITYL KN R+++ + R LS + + Y PSVA M+Y IA KL +K+IIFIGQDLAYA +G SHP+EY+ N I +
VC76_06695 +1300869 CASLIHPNAITYLEKNNREYILISRFLSFALFIACHDYGYFDQSPSVAHMSYIIAAKLCHKNIIFIGQDLAYAENGDSHPQEYQNSSTFESN---IYQKI +1301166
CS..1_0178 +405 KILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLD---ITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRK +504
+ L YGG + T S W++FK +E+ +LD I TYNCTEGGA IEGTIE+ FK C++LL+ + K F KL+K N KQ ELMLKS+ K K
VC76_06695 +1301169 ECLGYGGKNSVKTHSIWLLFKQIIEQL------ILDYPYINTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIKLKKPNIQKQNELMLKSYAKIYK +1301466
CS..1_0178 +505 AIKIC-EYLEKECAFISN------TLHFLSNDENN--FKNIIEQLDTFKEKINNELILR--SVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEH +604
+IK C E+ ++ A I + TL +LS +E +I+ +D FK K+ N ++ ++ L QFELNLARIYVLNPK ED+FNK++LWIKEH
VC76_06695 +1301469 SIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKEILDILIQIIDNFKTKLENVNMVDFYEILGPLLMQFELNLARIYVLNPKTLEDSFNKSVLWIKEH +1301766
CS..1_0178 +605 LEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIK +646
LE I M+ H +A + L KNII LE+EL+ + +Y+Q+IK
VC76_06695 +1301769 LEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIK +1301892
CSUB8521_0178 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical proteinScore: 1301.00 bits: 565.02 e-value: 0.000000
length: 642 gaps: 14 id: 327 positives: 425 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
AT.._00898 +459010 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +459307
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+ GN DAL GI
AT.._00898 +458710 FEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVFHGNDPLDALQGI +459007
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
AT.._00898 +458410 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +458707
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q ++
AT.._00898 +458110 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEH +458407
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + I T W+MFK LE+ + + LD YNCTEGGARI+GTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
AT.._00898 +457810 IL-TEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +458107
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
AT.._00898 +457510 IEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +457807
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
AT.._00898 +457210 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +457333
CSUB8521_0178 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical proteinScore: 1310.00 bits: 568.90 e-value: 0.000000
length: 644 gaps: 24 id: 334 positives: 434 coverage: 0.52 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN ++L N LKE L + + F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
AT.._00928 +472006 KELFNKNIESLSNILLKESLKQIQSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +472303
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
AT.._00928 +471706 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +472003
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDYVLSLER+ TSEFFNNDFG+FDKDI+
AT.._00928 +471406 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTSEFFNNDFGEFDKDIV +471703
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HYGKYDTYNP +402
FV V+HP TI YL+ + F+ Q++L+ Y NLK F Y SVA MAY A L +K+IIFIGQDLAYA DG SH K+Y H G +
AT.._00928 +471106 FVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKDYSNLDKHEGHF----- +471403
CS..1_0178 +403 QEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSF +502
+ D G + L+YGG ++ W MF+ L+ +S +N++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++
AT.._00928 +470806 -QRDKGKFQCLAYGGDGKAESSEVWTMFRFFLQDTIS--RNIIS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAY +471103
CS..1_0178 +503 YKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKE +602
YK K+IK C + L + I L EN+ I ++D FK K+ N ++ ++ L QFELNLA+IYVLNPK KEDAFNK++LWIKE
AT.._00928 +470506 YKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKE +470803
CS..1_0178 +603 HLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +646
HLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
AT.._00928 +470206 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +470335
CSUB8521_0178 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD proteinScore: 1311.00 bits: 569.34 e-value: 0.000000
length: 649 gaps: 30 id: 332 positives: 429 coverage: 0.51 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
YSQ_02175 +444940 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +445237
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN
YSQ_02175 +444640 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGND +444937
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DF
YSQ_02175 +444340 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDF +444637
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDI+F+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA M+YF+++ L++K+IIFIGQDLAYA +G SHP +Y+
YSQ_02175 +444040 GEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +444337
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q + L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
YSQ_02175 +443740 YESQMYKHIL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +444037
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISNTLH-----FLS-NDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTL +602
++YK K+IK C K +SN +LS N++ + N+ IE++D FK E I L ++ L QFELNLARIYVLNPK KEDAFNK++
YSQ_02175 +443440 AYYKVCKSIKHCRDFSK---ILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDAFNKSI +443737
CS..1_0178 +603 LWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +651
LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
YSQ_02175 +443140 LWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +443284
CSUB8521_0178 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD proteinScore: 1318.00 bits: 572.36 e-value: 0.000000
length: 642 gaps: 14 id: 330 positives: 428 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
YSQ_02185 +448749 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +449046
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +IL+ GN DAL GI
YSQ_02185 +448449 FEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYSILSHGNDPLDALQGI +448746
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YANKA+IFCADSAYPILAKHDIKPDYV LER + T+EFFN DFG+FD+++
YSQ_02185 +448149 EQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTAEFFNHDFGEFDREVC +448446
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ SV+HPN I YL K F V S Y L HF Y SVA MA ++++ L +K+IIFIGQDLAYA +G SHP +Y+ TY + +
YSQ_02185 +447849 FIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDYQNSA--TYESKAHEP +448146
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + T W+MFK LE+ + + LD YNCTEGGARI+G IEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
YSQ_02185 +447549 IL-TKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +447846
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLA+IYVLNPK KEDAFNK++LWIKEHL
YSQ_02185 +447249 IKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYVLNPKTKEDAFNKSILWIKEHL +447546
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L +++++++K
YSQ_02185 +446949 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +447072
CSUB8521_0178 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1336.00 bits: 580.12 e-value: 0.000000
length: 655 gaps: 36 id: 338 positives: 437 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
YSQ_02255 +462671 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +462968
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN
YSQ_02255 +462371 KNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGND +462668
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
S D L GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDF
YSQ_02255 +462071 STDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDF +462368
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FD+D++FV S ++P TI YL+KN R F+ R S + NL + Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
YSQ_02255 +461771 GEFDQDVLFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHE +462068
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + D G + L+YGG + ++ W MF+ L+ +S KN++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
YSQ_02255 +461471 GHFRR------DKGKFQCLAYGGNGKVESSEIWTMFRFSLQNTIS--KNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +461768
CS..1_0178 +503 IELMLKSFYKTRKAIKICEYLEKECAFISNTLH-----FLS-NDENNFKNI-IEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKED +602
E +LK++YK K+IK C K +SN +LS N++ + N+ IE++D FK E I L ++ L QFELNLARIYVLNPK KED
YSQ_02255 +461171 NEFLLKAYYKVCKSIKHCRDFSK---ILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKED +461468
CS..1_0178 +603 AFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +657
AFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
YSQ_02255 +460871 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +461033
CSUB8521_0178 vs: YSS_07230 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD proteinScore: 1304.00 bits: 566.32 e-value: 0.000000
length: 642 gaps: 14 id: 326 positives: 427 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
YSS_07230 +1351618 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +1351915
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN DAL GI
YSS_07230 +1351918 FEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGI +1352215
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
YSS_07230 +1352218 EQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +1352515
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q ++
YSS_07230 +1352518 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEH +1352815
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + I T W+MFK LE+ + + LD YNCTEGGARI+GTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
YSS_07230 +1352818 IL-TEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +1353115
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
I+ C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
YSS_07230 +1353118 IEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +1353415
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++++++++
YSS_07230 +1353418 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1353541
CSUB8521_0178 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical proteinScore: 941.00 bits: 409.73 e-value: 0.000000
length: 627 gaps: 38 id: 269 positives: 375 coverage: 0.52 query coverage 0.42
CS..1_0178 +4 NIFEKNTQALQN---TKLKEKLLHFKQ-RNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQK +103
N F KN +AL L++KL K+ R F QG D LDIN I + EK Y + YPVL+FYGFGNGILYK LLQN+ ++
YSS_07245 +1357361 NNFNKNLKALSGFEYNDLRKKLEDLKELREFTFTQGKDNLDINIIKKRN-LKKMYQDPIKELEKNLEYFKDFTRYPVLFFYGFGNGILYKILLQNQALKR +1357658
CS..1_0178 +104 IVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFN-----FLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +203
I++FEKELELI+L+ +DFS++L G LIIL DIN L F F R Y L + D+YE Y+EDILK N+ + IK L +GN
YSS_07245 +1357661 IIIFEKELELIFLALNFIDFSKDLSLGRLIILHHD--DIN----LPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRGND +1357958
CS..1_0178 +204 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +303
+DA+ GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + +E FNNDF
YSS_07245 +1357961 PKDAMQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNNDF +1358258
CS..1_0178 +304 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +403
FDKDIIF++ S++H TI+YL KN+RK++ + + + L + Y+ G SV+ MAY +A L +K+II IGQDLAYA DG +H + + H
YSS_07245 +1358261 KDFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARCLGLDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANLHN +1358558
CS..1_0178 +404 GKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQI +503
G Y+ +++D +YGG + ++ W +F+ E ++++K TYNCT+GGARIE IEKPFK++CE+LL + K F KL+ LN+ +Q+
YSS_07245 +1358561 GDYE----RDLDR-FSTTAYGGNGKVQSSEIWTLFRQIFENFIAFSKS----KTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQV +1358858
CS..1_0178 +504 ELMLKSFYKTRKAIKICEYLEKECAFISNTLHFLSNDEN--NFKNIIEQLDTFKEKINNE--LILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLL +603
+L LK + K +K + + +KEC + +H L+ +N + I + +D KEK+ N+ L L+ ++ + + L +Y+ + K D NK
YSS_07245 +1358861 KLGLKIYQKIKKNMNLSLNFKKECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLFLQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKLFA +1359158
CS..1_0178 +604 WIKEH---LEWIL-MLNDHSKALKITL +630
WI H +E I+ +L + K LKI +
YSS_07245 +1359161 WIYAHESLMENIIELLEAQDKRLKIAI +1359239
CSUB8521_0178 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD proteinScore: 1342.00 bits: 582.71 e-value: 0.000000
length: 652 gaps: 30 id: 340 positives: 440 coverage: 0.52 query coverage 0.53
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTly---nnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY+ + + EL LN YNDKYLLYPVLYFYGFGNGIL+KALLQN
YSS_07160 +1339267 KELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +1339564
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+N L++L+ + YNELCS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN
YSS_07160 +1339567 KNHQHIVVFEKDIEIIWIMFHILDFSNELQNARLMVLENDKLQAQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGND +1339864
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYVLSLER+ TSEFFNNDF
YSS_07160 +1339867 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTSEFFNNDF +1340164
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEY-----HY +402
G+FDKDI+FV S ++P TI YL+KN R F+ R S + NL + Y+ PSVA MAY A L+YK+IIFIGQDLAYA DG SH K+Y H
YSS_07160 +1340167 GEFDKDILFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDYKNLDKHE +1340464
CS..1_0178 +403 GKYDTYNPQEIDYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQ +502
G + + D G + L+YGG + ++ W MF+ L+ +S KN++ TTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
YSS_07160 +1340467 GHF------QRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQNTIS--KNIVS-TTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQ +1340764
CS..1_0178 +503 IELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKEDAFN +602
E +LK++YK K+IK C + L + I L E + IE++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KEDAFN
YSS_07160 +1340767 NEFLLKAYYKVCKSIKHCRDFNKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFN +1341064
CS..1_0178 +603 KTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +654
K++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
YSS_07160 +1341067 KSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +1341220
CSUB8521_0178 vs: YSU_02220 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1958bp / 652aa PV: No
Function: No annotation dataScore: 691.00 bits: 301.89 e-value: 0.000000
length: 275 gaps: 0 id: 164 positives: 201 coverage: 0.50 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
YSU_02220 +454819 KELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +455116
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
YSU_02220 +454519 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +454816
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYV +277
E ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKHDIKPDY
YSU_02220 +454219 EQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYA +454441
Score: 605.00 bits: 264.79 e-value: 0.000000
length: 370 gaps: 21 id: 165 positives: 226 coverage: 0.50 query coverage 0.51
CS..1_0178 +280 LERVKETSEffnndfgkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYAND +379
LER + +E FNNDFG+FDKDI+F++ SV HP TI YL+KN R F+ V S +Y L +F Y SVA M + + + L YK+II IGQDLAYA D
YSU_02220 +453992 LERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKD +454289
CS..1_0178 +380 GSSHPKEY-----HYGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQ +479
G +H + + H G Y+ +++D +YGG + ++ W +F+ EK + K ITTYNCTEGGARIEGTIEKPF CE LL K+
YSU_02220 +453692 GQTHSQGFIHANLHNGDYE----RDLD-KFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLN +453989
CS..1_0178 +480 KHFTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFEL +579
K F KLE L KQ E +LK++YK ++IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFEL
YSU_02220 +453392 KPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFEL +453689
CS..1_0178 +580 NLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +649
NLARIYVLNPK KEDAFNK++LWIKEHLE + ++ H KA + L KNI+ LE++L+ + L +++++++K
YSU_02220 +453092 NLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK +453299
CSUB8521_0178 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD proteinScore: 1320.00 bits: 573.22 e-value: 0.000000
length: 646 gaps: 20 id: 328 positives: 423 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF-----IHNGGGYTlynnslselneklnlynd---kyllyPVLYFYGFGNGILYKALLQN +102
K +F KN +AL N LKE L K F+++ G D LDIN NGGGY + E + N KYLLYPVLYFYGFGNGIL+KALLQN
YSU_02270 +464964 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +465261
CS..1_0178 +103 KNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNS +202
KN Q IVVFEK++E+I++ FH+LDFS EL+ L++L+T ++I YNELCS+ PFF F R+YFL+L YYER++EDIL N+ + + K IL GN
YSU_02270 +464664 KNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNIILRNGND +464961
CS..1_0178 +203 SQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndf +302
DAL GIE ++YNLP +I+ S+KELL KRK S AIIVSTGPSLIKQLPLLK+YANKA+IFCADS+YPILAKH IKPDYV LER + T+EFFNNDF
YSU_02270 +464364 PLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNNDF +464661
CS..1_0178 +303 gkfdkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDT +402
G+FDKDIIF+ V+HP I YL+ R + Q++L+ Y NLK F Y SVA ++A L +K+IIFIGQDLAYA +G SHP +Y+
YSU_02270 +464064 GEFDKDIIFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA--N +464361
CS..1_0178 +403 YNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
Y Q ++ L +YGG + T S W++FK E ++ + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK
YSU_02270 +463764 YESQMYEHILTT-AYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLK +464061
CS..1_0178 +503 SFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFK---EKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWI +602
++YK ++IK C + L + I L E + IE++D FK E I L ++ L TQFELNLARIYVLNPK KEDAFNK++LWI
YSU_02270 +463464 AYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWI +463761
CS..1_0178 +603 KEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +648
KEHL+ + ++ H KA + L KNI+ LE++L+ + L ++++++++
YSU_02270 +463164 KEHLKFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR +463299
CSUB8521_0178 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD proteinScore: 1333.00 bits: 578.83 e-value: 0.000000
length: 648 gaps: 34 id: 336 positives: 431 coverage: 0.53 query coverage 0.52
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
YSU_02210 +451005 KELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTSDNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +451302
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++ GN DAL GI
YSU_02210 +450705 FEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGI +451002
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FDKDI+
YSU_02210 +450405 EQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIV +450702
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
FV V+HP I YL+ RK++ + R L Y LK+F++L PSVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q ++
YSU_02210 +450105 FVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEH +450402
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG K I T WI FK LE + ITTYNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK K+
YSU_02210 +449805 IL-TEAYGGKKEIKTHEVWIFFKQILEAMII----KYHITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKS +450102
CS..1_0178 +503 IKICEYLEKECAFISNTLHFLSNDENNFKNI--------------IEQLDTFKEKINNELILRS---VIDSLNTQFELNLARIYVLNPKAKEDAFNKTLL +602
IK C K LSND NN +NI I ++D FK K+ N ++ ++ L TQFELNLARIYVLNPK KEDAFNK++L
YSU_02210 +449505 IKHCRDFSK----------ILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +449802
CS..1_0178 +603 WIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +650
WIKEHLE + ++ H KA + L KNI+ LE++L+ + L ++++++++
YSU_02210 +449205 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR +449346
CSUB8521_0178 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD proteinScore: 1309.00 bits: 568.47 e-value: 0.000000
length: 642 gaps: 14 id: 327 positives: 426 coverage: 0.51 query coverage 0.51
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
K +F KN +AL N LKE L K F+++ G D LDIN LY N + ELN LN YNDKYLLYPVLYFYGFGNGIL+KALLQNKN Q IVV
A6.._02165 +440713 KELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSDNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVV +441010
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK++E+I++ FH+LDFS EL+N L++L TS +DI + CS+ PFF F R+YFL+L YYER++ED+L+ N+ + + K +I++ GN DAL GI
A6.._02165 +440413 FEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGI +440710
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E ++YNLP +I+ S+KELL KRK S AIIVSTGPSL KQLPLLK+YA KA+IFCADS+YPILAKH IKPDYV LER + T+EFFN DFG+FD I
A6.._02165 +440113 EQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDNGIC +440410
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEIDY +402
F++ S++HPN I YL K F V S +Y L +F Y SVA MA ++++ L++K+IIFIGQDLAYA +G SHP +Y+ Y Q ++
A6.._02165 +439813 FIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDYQNSA--NYESQMYEH +440110
CS..1_0178 +403 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +502
L +YGG + I T W+MFK LE+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E +LK++YK ++
A6.._02165 +439513 IL-TEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQS +439810
CS..1_0178 +503 IKICEYLE----KECAFISNTLHFLSNDENN---FKNIIEQLDTFKEKI----NNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHL +602
IK C K I N+ L N + N + II+ +D K +I N + L ++ L TQFELNLARIYVLNPK KEDAFNK++LWIKEHL
A6.._02165 +439213 IKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHL +439510
CS..1_0178 +603 EWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +644
E + ++ H KA + L KNI+ LE++L+ + L ++ +++++
A6.._02165 +438913 EFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWTERVRR +439036
CSUB8521_0178 vs: CINS_0156 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1959bp / 653aa PV: Yes
Function: motility accessory factorScore: 1711.00 bits: 741.88 e-value: 0.000000
length: 639 gaps: 3 id: 376 positives: 469 coverage: 0.58 query coverage 0.58
CS..1_0178 +1 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHN--GGGYTlynnslselneklnlyndkylly-PVLYFYGFGNGILYKALLQNKNR +100
M +N+F+KN AL++ +LKEKL F +R FQ+ G D LDINFI GGGY + + D P+LYFYGFGNGILYK LLQNK
CINS_0156 +141143 MQENLFDKNINALKDKRLKEKLQNFNERKFQVQIGDDSLDINFIKENYGGGYNKIYDDALFDLHEKIKTYDDKYFLYPILYFYGFGNGILYKVLLQNKHH +141440
CS..1_0178 +101 QKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQD +200
QKIVVFE+ELE I+LSFH +DFSEELK +LII DTS ++IN + +C SPFFNFLRVYFLDLHCDYYE+YQ+DILK N+ MQ++IK+ I GN S+D
CINS_0156 +140843 QKIVVFEQELEFIFLSFHYIDFSEELKTNSLIIFDTSAININDFERICRHSPFFNFLRVYFLDLHCDYYEKYQDDILKINRQMQEHIKKIIYGFGNDSKD +141140
CS..1_0178 +201 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkf +300
+L+G++N+I+N+P+I+S +FKELL KR N+ + AIIVSTGPSLIKQLPLLKQY+NKA+IFCADSAYPILAK++IKPDYVLSLERV TSEFFNNDFG+F
CINS_0156 +140543 SLIGVQNFIHNIPNIVSCITFKELLKKRSNARENAIIVSTGPSLIKQLPLLKQYSNKATIFCADSAYPILAKYNIKPDYVLSLERVDFTSEFFNNDFGEF +140840
CS..1_0178 +301 dkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNP +400
DKDI+FVL + HPNT YL K + + + L F Y+ SVA M Y +AM L +++II IGQDLAYANDG+SHP+EYHYGKYDTY+P
CINS_0156 +140243 DKDIVFVLKYLTHPNTFKYLNKKQTNITIISEYSPCINFIGLNDFGYIYTGSSVAVMGYMLAMHLKHQNIILIGQDLAYANDGASHPEEYHYGKYDTYDP +140540
CS..1_0178 +401 QEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFY +500
++IDY LK +YGG + TT+TW +FK +LE+ + K + +ITTYN TEGGARIEG IEK FK++CE +L K +K F LEKLN +QIEL LK+FY
CINS_0156 +139943 KDIDYNLKTTAYGGKGEVKTTTTWNLFKIQLEEAIFNVKQLCNITTYNATEGGARIEGAIEKSFKELCENILDKNFEKSFKNLEKLNHKRQIELKLKAFY +140240
CS..1_0178 +501 KTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILML +600
+ IK C+ LEKEC I N + FLS DE NF +I++LD FK KI I+ S+ S+N QF+LNLARI+VLNPK KED+FNKTLLWI+EHLEWI ML
CINS_0156 +139643 NIYEIIKFCQDLEKECINIHNHISFLSSDEQNFTILIKKLDEFKTKIEKNSIIASITTSINIQFDLNLARIFVLNPKTKEDSFNKTLLWIQEHLEWITML +139940
CS..1_0178 +601 NDHSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKL +639
+H K L+ TLE + LE+ L+ +NLH+ IQKIK KL
CINS_0156 +139343 EEHIKTLRKTLEHSSLFLEENLKQHNLHRQIQKIKSTKL +139457
CSUB8521_0178 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factorScore: 1368.00 bits: 593.92 e-value: 0.000000
length: 643 gaps: 22 id: 344 positives: 440 coverage: 0.54 query coverage 0.53
CS..1_0178 +4 NIFEKNTQALQNTKLKEKLLHF-KQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +103
N+F KN QAL N LK+KLL+ KQ FQI+QG D LDIN + +Y N+L ELN LN Y +KY LYPVLYFYGFGNGILYKALLQN+N + I+V
CINS_1188 +1147943 NMFAKNIQALLNPHLKQKLLQIQKQNKFQIIQGKDNLDINLLNTQDNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALLQNQNHKHIIV +1148240
CS..1_0178 +104 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +203
FE +LELIY F++LDFS+EL+ L+I+DT + Y+ LCS P FNF R YFL+LH +YYE+YQ+D+L+ N N+ K +I + GNS D L GI
CINS_1188 +1147643 FENDLELIYAMFQILDFSKELEEARLVIIDTNDLKRRDYDYLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSIFSHGNSPIDVLQGI +1147940
CS..1_0178 +204 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +303
E ++YN+P +ISN S+KELL KRKN S AIIVSTGPSLIKQLPLLKQY+ KA+IFCADSAYPILAK++IKPDYV LER+ T+EFFNNDFG+FDKDI+
CINS_1188 +1147343 EQFVYNIPSMISNPSYKELLNKRKNLSDTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAEFFNNDFGEFDKDIV +1147640
CS..1_0178 +304 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYG---KYDTYNPQE +403
FVL SV+HPN YL K + K + + + +L+ Y PSVANMAY +A L++K+IIFIGQDLAYA +G SHPK+Y+ + DTY +
CINS_1188 +1147043 FVLKSVVHPNAFKYLEKKQTKIVVISENSHFINFIDLQNLGYAYSGPSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDYQNSATFESDTY--EH +1147340
CS..1_0178 +404 IDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKT +503
ID L+YGG + T W++FK E+EK +S +N TYNCTEGGARIEG IEKPFK+ICE LL K +K F KL+ LN KQ EL+LK++ K
CINS_1188 +1146743 ID----TLAYGGGYMVKTHFIWLLFKNEMEKLISRNENC---ATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQNELLLKAYCKI +1147040
CS..1_0178 +504 RKAIKICEYLEKECAFISNTLHFLSND------ENNFKNIIEQLDTFKEKINNELILRSVIDSLN---TQFELNLARIYVLNPKAKEDAFNKTLLWIKEH +603
++IK C L+K+ ++L + ND E ++I ++D K K+ N + + + L QFELNLARIYVLNPK KED+FNK++LWIKEH
CINS_1188 +1146443 NQSIKKCVDLKKDFQKELDSLNKMMNDFLLSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTKEDSFNKSVLWIKEH +1146740
CS..1_0178 +604 LEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKK +646
LEWI ++ H A K+ L KNI LE L N+ + ++KI K
CINS_1188 +1146143 LEWIQLIIAHINAQKLGLIKNIKQLECVLINRGFEKLVEKICK +1146269
CSUB8521_0178 vs: CONCH_0163 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 1911bp / 637aa PV: Yes
Function: motility accessory factorScore: 1845.00 bits: 799.69 e-value: 0.000000
length: 639 gaps: 10 id: 430 positives: 504 coverage: 0.68 query coverage 0.67
CS..1_0178 +1 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
M K IF KN +AL N KLKE L K NF+ +QG DPLDINFIHNGGGYTLYNN+L EL+EKL LYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CONCH_0163 +145110 MQKHIFNKNLKALNNIKLKETLKKIKILNFKTIQGKDPLDINFIHNGGGYTLYNNTLNELDEKLKLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +145407
CS..1_0178 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTS---LVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQD +200
VVFEKELE IYLSFH +DFSEELKN +LI+LD+ +DI I L + PFFNFLR+YFLDL C+YYE+YQ+DILK N +Q++IKQ IL+ GNSSQD
CONCH_0163 +144810 VVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQI---LFFSNPFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIKQIILSNGNSSQD +145107
CS..1_0178 +201 ALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkf +300
AL GIEN++YNLPDIISN+SF ELLLKRKN AIIVSTGPSLIKQLPLLKQYAN ASIFCADSAYPILAK++IKPDYVLSLERV ETSEFFNNDFG+F
CONCH_0163 +144510 ALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVETSEFFNNDFGEF +144807
CS..1_0178 +301 dkdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNP +400
+KDI+F+L+ V+H TI++L N K +F+QR +Y LK F L PSVA MAYF+ + L++K+IIFIGQDLAYA+DGSSHP+EY+YGKYDTYNP
CONCH_0163 +144210 NKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPEEYYYGKYDTYNP +144507
CS..1_0178 +401 QEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFY +500
QEIDY L L+Y G + T TW++FK LE +S +K ++I TYNCTEGGARI+ TIEKPFKQ C+ELL +E +K F KLEKLN KQ ELMLKSFY
CONCH_0163 +143910 QEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAKLEKLNENKQKELMLKSFY +144207
CS..1_0178 +501 KTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILML +600
K + IK+C+ L KEC ++SN L FL NDE NF II++LD FK K L +++ LNTQFELNLARIYVLNPK KED FNK LWIKEHLEW+ ++
CONCH_0163 +143610 KIHQVIKLCDSLHKECIYLSNRLNFLINDEKNFSSIIKELDHFKNKFEKINFLNELLNPLNTQFELNLARIYVLNPKTKEDVFNKNYLWIKEHLEWLELI +143907
CS..1_0178 +601 NDHSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKL +639
H K L+ +LEKNIINLE+ELEN+ L++ I KIK L
CONCH_0163 +143310 IGHIKKLQESLEKNIINLERELENRHLQKQITKIKNTLL +143424
CSUB8521_0178 vs: Cla_0168 in RM2100; ATCC BAA-1060D (Campylobacter lari RM2100, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factorScore: 1606.00 bits: 696.59 e-value: 0.000000
length: 640 gaps: 7 id: 389 positives: 478 coverage: 0.61 query coverage 0.60
CS..1_0178 +1 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNG--GGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQ +100
++K +F KN +L+N LK KL K F++ GSDPLDINFI N LY SL +LNEKLNLYNDKY LYPV YF+GFGNGILYKALLQNKN Q
Cla_0168 +153737 VDKKLFNKNLNSLKNENLKNKLKNLKVNKFRVSIGSDPLDINFISNDKITKSKLYEHSLVQLNEKLNLYNDKYFLYPVFYFFGFGNGILYKALLQNKNHQ +154034
CS..1_0178 +101 KIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDA +200
KIVVFE ELE IYLSFH +DFS+EL + ALIILD ++ + LCS PFF FLRVYFLD+HCDYYE+Y+++IL TN+NMQK+IKQ IL GN S+DA
Cla_0168 +153437 KIVVFECELEFIYLSFHFVDFSKELNDDALIILDIKELNELDFQILCSNDPFFHFLRVYFLDIHCDYYEKYHDEILNTNENMQKHIKQIILLHGNDSKDA +153734
CS..1_0178 +201 LMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfd +300
L+GIEN++YNL D+ISNFS +L+ KR+ + K AIIVSTGPSL KQLPLLKQYAN ASIFCAD +YPILAK IKPDYV SLER+++TSEFFNNDFGKFD
Cla_0168 +153137 LIGIENHLYNLYDLISNFSLSKLITKREKACKNAIIVSTGPSLTKQLPLLKQYANHASIFCADGSYPILAKEGIKPDYVFSLERIEKTSEFFNNDFGKFD +153434
CS..1_0178 +301 kdIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKY-DTYNP +400
KDI+F+L SV HPNTI YL++N RKF+ QRLL K+ NL Y+ GCPSVANMAYFIA+ L +++IIFIGQDLAYA DGSSHPK+YHY DTY
Cla_0168 +152837 KDILFILMSVTHPNTIKYLKQNNRKFIITQRLLPFVKFLNLNSNGYISGCPSVANMAYFIAVLLKHENIIFIGQDLAYAKDGSSHPKDYHYSSTCDTYRR +153134
CS..1_0178 +401 QEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFY +500
I+ L+YGG + I T W +F+ ELEKK+++ ++ +ITTYN TEGGARIEGTIEKPFK++CEELL KE K F KL + K+IEL+LKSFY
Cla_0168 +152537 THIN----TLAYGGKEQIKTHEVWNVFRVELEKKITFVRDNFNITTYNATEGGARIEGTIEKPFKELCEELLAKEALKNFAKLNETSKEKKIELLLKSFY +152834
CS..1_0178 +501 KTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILML +600
K +A KICE L + + + N +HFL NDENNF II+++D FK I ++ + L QFELNLA+IYVL PK +EDA+NK LLWIKEHLEW +++
Cla_0168 +152237 KLYQASKICENLILKSSSLINKIHFLINDENNFSKIIQEIDIFKNHIEKIKLIEELTLPLFVQFELNLAKIYVLHPKTQEDAYNKKLLWIKEHLEWFVLI +152534
CS..1_0178 +601 NDHSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLY +640
+H K LK +EK + E L +N+++YI+KI+ KLY
Cla_0168 +151937 ENHIKILKEVIEKSFLKFENILVEKNMQKYIHKIQNKKLY +152054
CSUB8521_0178 vs: CSUB8521_0235 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1926bp / 642aa PV: Yes
Function: putative motility accessory factorScore: 2343.00 bits: 1014.51 e-value: 0.000000
length: 643 gaps: 3 id: 531 positives: 563 coverage: 0.83 query coverage 0.83
CS..1_0178 +1 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
M K +FEKNTQALQNTKLKEKLLHFKQRNFQILQG DPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CS..1_0235 +207304 MQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +207601
CS..1_0178 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM +200
VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDIL TNQNMQKYIKQ IL+KGNSSQDALM
CS..1_0235 +207004 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSKGNSSQDALM +207301
CS..1_0178 +201 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkd +300
GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERV TSEFFNNDFG FDKD
CS..1_0235 +206704 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEFFNNDFGDFDKD +207001
CS..1_0178 +301 IIFVLTSVIHPNTITYLRKNRRKFM-FVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQE +400
I+FVL S++HP T YL+K ++ + + + Y LK F Y+ SVA MAY +A+KL++K+IIFIGQDLAYA DGSSHPKEYHYGKYDTYNPQE
CS..1_0235 +206404 IVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYGKYDTYNPQE +206701
CS..1_0178 +401 IDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKT +500
IDY L + YGG ++ T+ TW++FKT+LE + +K +TYN TEGGARIEGTIEKPFKQICEELL K+ +K F KLEKLN KQ ELMLK+FYK
CS..1_0235 +206104 IDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQ--HTSTYNATEGGARIEGTIEKPFKQICEELLTKKLKKPFVKLEKLNQNKQKELMLKAFYKV +206401
CS..1_0178 +501 RKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLND +600
K IKIC LEKEC I NTL FLSNDE NFK IIEQLD FK KI LIL+ +ID LNTQFELNLARIYVLNPK KEDAFNKTLLWIKEHLEWILMLND
CS..1_0235 +205804 HKVIKICNILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSKIEKILILKELIDPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLND +206101
CS..1_0178 +601 HSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDLE +643
HSKALKITLEKNIINL KELENQNLHQYIQKIKKVKLYFKDLE
CS..1_0235 +205504 HSKALKITLEKNIINLAKELENQNLHQYIQKIKKVKLYFKDLE +205630
CSUB8521_0178 vs: CSUB8523_1511 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1923bp / 641aa PV: Yes
Function: putative motility accessory factorScore: 1248.00 bits: 542.16 e-value: 0.000000
length: 643 gaps: 21 id: 335 positives: 432 coverage: 0.52 query coverage 0.52
CS..1_0178 +5 IFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFE +104
I E N A+ + LKE+L Q +QI+QG D LDIN I +GGGY LY+ L ELN+ LNLYNDKYLLYPVL+FYGFGNGILYKALLQN N + I+VFE
CS..3_1511 +1480025 ILENNINAVFDHNLKEQLKKVNQT-YQIVQGDDNLDINII-DGGGYRLYDKPLEELNKTLNLYNDKYLLYPVLFFYGFGNGILYKALLQNLNHKIILVFE +1480322
CS..1_0178 +105 KELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYE-RYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIE +204
++ +IY F ++DFS+ELK L++LD +IN L FNFLR YFL++HCDYY+ +YQE+ILK N +Q IK+ I++ G+ D L GI+
CS..3_1511 +1479725 PDVNIIYTMFKMIDFSKELKENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDDKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIK +1480022
CS..1_0178 +205 NYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdIIF +304
+I N+P +I+N S+KELL KRKN S+ AIIVSTGPSL KQL LLKQY NKASIFCADSAYPILAK +IKPDYV SLER TSEFFN DFG+FDKDI+F
CS..3_1511 +1479425 HFIQNIPKMIANPSYKELLNKRKNLSETAIIVSTGPSLTKQLSLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNHDFGEFDKDILF +1479722
CS..1_0178 +305 VLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYH-YGKYDTYNPQEIDY +404
V+ SV HPNTI YL KN+RK+M V KY L F Y SVA MA ++++ L + +IIFIGQDLAY + G SHPK+Y+ ++T + ID
CS..3_1511 +1479125 VIKSVTHPNTIKYLEKNKRKYMIVSTPEYFFKYCSLNDFGYFNMGWSVAHMACYLSVHLKHSNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHID- +1479422
CS..1_0178 +405 GLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKA +504
+L YGG ++ T TWI FK LE + N ++I YNCTEGGARI GTIE+PFKQ+CE+LL K+ K F KLE LN KQ EL+LK+++K K+
CS..3_1511 +1478825 ---VLGYGGIGYVKTHKTWIFFKKILENDI-LTFNKMNIKIYNCTEGGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKS +1479122
CS..1_0178 +505 IKICEYLEKE-----CAFISNTLHFLSNDENN----FKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEW +604
I+ E L+KE + N LH D N F+ I++Q+D K I +L L QFELNLARIYVLNPK +ED++NK++LWIKEHL+W
CS..3_1511 +1478525 IRQYENLKKELCERNISINKNLLHIDNLDIQNSIHMFEFILKQIDAIKTSIYRCGLLNG---PLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDW +1478822
CS..1_0178 +605 ILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKL +647
I ++ H + K L++ ++ + EL + ++KI++ L
CS..3_1511 +1478225 IKLIIAHIDSQKEVLQRSVVTTKDELIEKGFLNLVEKIEQRTL +1478351
CSUB8521_0178 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factorScore: 2912.00 bits: 1259.95 e-value: 0.000000
length: 642 gaps: 0 id: 638 positives: 639 coverage: 0.99 query coverage 0.99
CS..1_0178 +1 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
MNKNIFEKN QALQNTKLKEKLLHFKQRNFQILQG DPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CS..3_0172 +155453 MNKNIFEKNIQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFIHNGGGYTLYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +155750
CS..1_0178 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM +200
VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM
CS..3_0172 +155153 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM +155450
CS..1_0178 +201 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkd +300
GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDFG FDKD
CS..3_0172 +154853 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFFNNDFGDFDKD +155150
CS..1_0178 +301 IIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEI +400
I+FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEI
CS..3_0172 +154553 IVFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEI +154850
CS..1_0178 +401 DYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTR +500
DYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTR
CS..3_0172 +154253 DYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTR +154550
CS..1_0178 +501 KAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDH +600
KAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDH
CS..3_0172 +153953 KAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDH +154250
CS..1_0178 +601 SKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDLE +642
SKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDLE
CS..3_0172 +153653 SKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDLE +153776
CSUB8521_0178 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factorScore: 2102.00 bits: 910.55 e-value: 0.000000
length: 641 gaps: 0 id: 470 positives: 529 coverage: 0.73 query coverage 0.73
CS..1_0178 +1 MNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKI +100
M K +FEKN QALQN KLKEKL FK+ NF+++ G D LDINFIHNGGGY LY + L +LNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI
CVOL_0220 +187968 MQKALFEKNIQALQNVKLKEKLQNFKKNNFKVIVGNDALDINFIHNGGGYRLYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYKALLQNKNRQKI +188265
CS..1_0178 +101 VVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALM +200
VVFEKELE IYLSFH +DFSEELKNGALI+LDT +++IN YNE+CS SPFFNFLRVYFLD+HCDYYE+YQEDIL TN NMQ +IK++I GN SQD+LM
CVOL_0220 +187668 VVFEKELEFIYLSFHYIDFSEELKNGALIVLDTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLHIKRSIYRYGNDSQDSLM +187965
CS..1_0178 +201 GIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkd +300
GIEN+IYNLP IISN+SFK+L LKRK S AIIVSTGPSLIKQLPLLKQY N ASIFCADSAYPILAK IKPDYVLSLERVKETSEFFNNDF + DKD
CVOL_0220 +187368 GIENFIYNLPKIISNYSFKQLCLKRKKLSDMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERVKETSEFFNNDFKELDKD +187665
CS..1_0178 +301 IIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQEI +400
++FVL S+ HPNT YL N RK + + L F Y+ SVA MAYF+A+ L++K+IIFIGQDLAYA DGSSHPKEY+YG+YDTY+P++I
CVOL_0220 +187068 VLFVLKSLTHPNTFQYLNANNRKIIPATYYTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGSSHPKEYYYGQYDTYDPKDI +187365
CS..1_0178 +401 DYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTR +500
Y L ++YGG + T W++FKT++E+ + AK L+ TTYNCTEGGARI+GTIEKPFKQICE+LL K+ K F KLEKLN KQ ELMLK+FYK
CVOL_0220 +186768 SYHLTTIAYGGQDKVFTNEIWMLFKTQIEEAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKLEKLNQNKQKELMLKAFYKVY +187065
CS..1_0178 +501 KAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDH +600
KAIKIC LEKEC + NTL FLSNDE NFKN+IEQLD FK KI LIL+ +I+ LNTQFELNLARIYVLNPK KEDAFNKTLLWIKEHLEWILML DH
CVOL_0220 +186468 KAIKICNTLEKECLHLYNTLIFLSNDEKNFKNVIEQLDYFKSKIEKILILKELINPLNTQFELNLARIYVLNPKTKEDAFNKTLLWIKEHLEWILMLKDH +186765
CS..1_0178 +601 SKALKITLEKNIINLEKELENQNLHQYIQKIKKVKLYFKDL +641
KALKITLEKNIINLEKELENQNLHQY+QKIKKVKLYFKDL
CVOL_0220 +186168 IKALKITLEKNIINLEKELENQNLHQYVQKIKKVKLYFKDL +186288
CSUB8521_0178 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factorScore: 1227.00 bits: 533.10 e-value: 0.000000
length: 637 gaps: 32 id: 323 positives: 419 coverage: 0.51 query coverage 0.50
CS..1_0178 +3 KNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVV +102
+++ +KN +++ T L + L + ++I+QG D LDIN + +Y N L ELN L +YN+KY LYPVLYFYGFGNGILYKALLQNK + I+V
CVOL_1306 +1273371 EDMLQKNIASIK-TGLNQTLSSISHSKYKIIQGNDNLDINLLNTQDNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIV +1273668
CS..1_0178 +103 FEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGI +202
FEK+LE+I+ F ++DFS+EL+ L+I DT ++I Y +C P NF R YFL+LH +YYERY++DIL+ N NM +Y+K+ +L GN DAL GI
CVOL_1306 +1273671 FEKDLEIIHTMFSIIDFSKELQEFRLVIADTNCLNILDYEIMCRQQPMLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGI +1273968
CS..1_0178 +203 ENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdII +302
E + +NLP +IS ++KELL KRKNS AIIVSTGPSL KQL LLK+YANKA+IFCADSAYPILAK++IKPDYVLSLERV TSEFFNNDFG FDKDII
CVOL_1306 +1273971 EQFTHNLPKMISCPTYKELLRKRKNSNDTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDII +1274268
CS..1_0178 +303 FVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYF----NLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYGKYDTYNPQ +402
F+L S I+ NTI YL KN RK+M + S D F L + YL SVANM +A +L +K+II IGQDLAY+NDG SH EY Y D Y
CVOL_1306 +1274271 FILKSYIYKNTIKYLEKNNRKYMLIS---STDAKFIFFTQLHNYGYLATGCSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTYLT-DAYKDN +1274568
CS..1_0178 +403 EI---DYG-LKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLK +502
+I DYG + ++YGG + ++ W +F+ E ++ K D T YNCTEGGARI G IEKPFK+ICE+LL K+ +K F LE L KQ ELMLK
CVOL_1306 +1274571 KIYKRDYGKYECIAYGGEGKVQSSFVWTLFRQTFESDIALFKH-YDTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLK +1274868
CS..1_0178 +503 SFYKTRKAIKICEYLEKECAFISNTLHFLSNDENNFKNIIEQLD-----TFKEKINNEL-------ILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +602
++ K +K+I C+ L K +LSN N +NI Q D F ++I E+ L V++ L QFELNLARIYVLNP ++D +NK
CVOL_1306 +1274871 AYTKIKKSIVHCQELTKTFQ------EYLSNLNENCQNICSQKDLNYIINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNK +1275168
CS..1_0178 +603 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKEL +639
+LLWIKEH+ W+ ++ H KA + L NII L++ +
CVOL_1306 +1275171 SLLWIKEHISWLELIIAHIKAQEKALNDNIIPLKEAI +1275279
CSUB8521_0178 vs: CVOL_1208 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation dataScore: 752.00 bits: 328.20 e-value: 0.000000
length: 356 gaps: 3 id: 209 positives: 252 coverage: 0.52 query coverage 0.52
CS..1_0178 +5 IFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFIHNGGGYTlynnslselneklnlyndkyllyPVLYFYGFGNGILYKALLQNKNRQKIVVFE +104
I E N A+ + LKE+L Q +QI+QG D LDIN I +GGGY LY+ L ELN+ LNLYNDKYLLYP L+FYGFGNGILYKALLQN N + I+VFE
CVOL_1208 +1175833 ILENNINAVFDHNLKEQLKKVNQT-YQIIQGNDNLDINII-DGGGYKLYDKPLEELNKTLNLYNDKYLLYPALFFYGFGNGILYKALLQNPNHKIILVFE +1176130
CS..1_0178 +105 KELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYE-RYQEDILKTNQNMQKYIKQTILTKGNSSQDALMGIE +204
++ +IY F ++DFS+ELK L++LD +IN L FNFLR YFL++HCDYY+ +YQE+ILK N +Q IK+ I++ G+ D L GI+
CVOL_1208 +1175533 PDVNIIYTMFKVIDFSQELKENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDGKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIK +1175830
CS..1_0178 +205 NYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEffnndfgkfdkdIIF +304
+I N+P +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLKQY NKASIFCADSAYPILAK +IKPDYV SLER TSEFFNNDFG+FDKDI+F
CVOL_1208 +1175233 HFIQNIPKMIAHPSYKELLNKRKNLSDTAIIVSTGPSLTKQLPLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNNDFGEFDKDILF +1175530
CS..1_0178 +305 VLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIA +360
V+ SV HPNTI YL KN+RK+M V KY L F Y SVA + FI
CVOL_1208 +1174933 VIKSVTHPNTIKYLEKNKRKYMIVSTPEYFFKYCSLNDFGYFNMGWSVAHILLFIG +1175098
Score: 491.00 bits: 215.62 e-value: 0.000000
length: 297 gaps: 18 id: 127 positives: 182 coverage: 0.52 query coverage 0.52
CS..1_0178 +350 SVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYH-YGKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTE +449
V ++ ++++ L + +IIFIGQDLAY + G SHPK+Y+ ++T + ID +L YGG + T TWI FK LE + N ++I YNCTE
CVOL_1208 +1174803 GVLPISCYLSVHLKHGNIIFIGQDLAYNDIGESHPKDYQNSSTFETDTYEHID----VLGYGGIGHVKTHKTWIFFKKILENDI-LTFNKMNIKIYNCTE +1175100
CS..1_0178 +450 GGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIELMLKSFYKTRKAIKICEYLEKE-----CAFISNTLHFLSNDENN----FKNIIEQLDT +549
GGARI GTIE+PFKQ+CE+LL K+ K F KLE LN KQ EL+LK+++K K+++ E L+KE + N LH D N F+ I++Q+D
CVOL_1208 +1174503 GGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSVRQYENLKKELCERNISINKNLLHIDNLDIQNSIHIFELILKQIDE +1174800
CS..1_0178 +550 FKEKINNELILRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKTLLWIKEHLEWILMLNDHSKALKITLEKNIINLEKELENQNLHQYIQKIKKVKL +646
K I +L L QFELNLARIYVLNPK +ED++NK++LWIKEHL+WI ++ H + K L++ I+ + EL + ++KI++ L
CVOL_1208 +1174203 IKTSIYRCGLLNG---PLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSIVTTKDELIEKGFLNLVEKIEQRAL +1174491