Gene group 27

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
27CJJ81176_0758Putative periplasmic protein9926Cj0735
CJ..6_0758
A911_03590
PJ16_03950
PJ17_03565
N135_00784
N564_00720
N565_00765
N755_00762
PJ18_03635
PJ19_04215
BN.._07520
C8J_0703
RC25_03405
CJ..m_0719
CJH_03695
CJSA_0699
CJM1_0719
ER.._00720
A0.._03465
H730_04585
CJE0835
AX.._03600
CJS3_0787
A0.._04510
QZ67_00749

Annotated functions

Function#Occuringscore
Putative periplasmic protein40.67
No annotation data10.00
hypothetical protein30.00
conserved hypothetical protein10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CJ..6_0758
RC25_03405
CJE0835
AX.._03600
CJS3_0787
1
BN.._07520
C8J_0703
CJ..m_0719
CJM1_0719

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CJ..6_0758
RC25_03405
CJE0835
AX.._03600
CJS3_0787
1
BN.._07520
C8J_0703
CJ..m_0719
CJM1_0719

81-176

81-176 : CJJ81176_0758 [tract entry] [top]

Function: conserved hypothetical protein
+0 VRNEMKKYFNIFKIFTNKTNAKFGLGVCSVVLSSSVCFAAVQATSKDGKIFYISEHSFKDNQVYDPQAEIFKKINGKNFYASKSKYPISNLTMIYNNPKS
+100 GNKNLSKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFIPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAF
+200 TDRRGGGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

4031

4031 : BN867_07520 [tract entry] [top]

Function: Putative periplasmic protein
+0 MIFKQKFLKKINGKNFYASKSKYPILNLTMIYNNPKSGNKNLCKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFMPFIVTAYAQNTNATNNKLILE
+100 NGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAFTDRGGGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

81116; NCTC 11828

81116; NCTC 11828 : C8J_0703 [tract entry] [top]

Function: hypothetical protein
+0 MIFKQKFLKKINGKNFYASKSKYPILNLTMIYNNPKSGNKNLCKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFMPFIVTAYAQNTNATNNKLILE
+100 NGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAFTDRGGGDLTIKPFYKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

CJ677CC519

CJ677CC519 : RC25_03405 [tract entry] [top]

Function: No annotation data
+0 MKKYFNIFKIFTNKTNAKFGLGVCSVVLSSSVCFAAVQATSKDGKIFYISEHSFKDNQVYDPQAEIFKKINGKNFYASKSKYPISNLTMIYNNPKSGNKN
+100 LSKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFIPFIVTAYA

[show detailed alignment]

CJM1cam

CJM1cam : CJM1cam_0719 [tract entry] [top]

Function: Putative periplasmic protein
+0 MIFKQKFLKKINGKNFYASKSKYPILNLTMIYNNPKSGNKNLCKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFMPFIVTAYAQNTNATNNKLILE
+100 NGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAFTDRGGGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

M1

M1 : CJM1_0719 [tract entry] [top]

Function: Putative periplasmic protein
+0 MIFKQKFLKKINGKNFYASKSKYPILNLTMIYNNPKSGNKNLCKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFMPFIVTAYAQNTNATNNKLILE
+100 NGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAFTDRGGGFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

RM1221

RM1221 : CJE0835 [tract entry] [top]

Function: hypothetical protein
+0 MKKYFNIFKIFTNKTNAKFGLGVCSVVLSSSVCFAAVQATSKDGKIFYISEHSFKDNQVYDPQAEIFKKINGKNFYASKSKYPISNLTMIYNNPKSGNKN
+100 LSKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFIPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAFTDRR
+200 GGGGEFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

RM3194

RM3194 : AXW77_03600 [tract entry] [top]

Function: hypothetical protein
+0 MKKYFNIFKIFTNKTNAKFGLGVCSVVLSSSVCFAAVQATSKDGKIFYISEHSFKDNQVYDPQAEIFKKINGKNFYASKSKYPISNLTMIYNNPKSGNKN
+100 LSKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFIPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAFTDRG
+200 GEFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]

S3

S3 : CJS3_0787 [tract entry] [top]

Function: Putative periplasmic protein
+0 VRNEMKKYFNIFKIFINKTNAKFGLGVCSVVLSSSVCFAAVQATSKDGKIFYISEHSFKDNQVYDPQAEIFKKINGKNFYASKSKYPISNLTMIYNNPKS
+100 GNKNLSKLEILTPDTSKEEIITAFSTLGTVSSDTQAVPSSFIPFIVTAYAQNTNATNNKLILENGELSSVYFCKPSIGDCGVPNNSQKGDRFKYLITAAF
+200 TDRRGGGEFNNQTILKENSYINNGCRKYLHLALKWSSLYFRICSF

[show detailed alignment]