Gene group 172

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
172N149_1457autotransporter domain protein01012AX.._06700
N149_1457
AB.._00255
AR.._00760
YSQ_01360
YSU_01375
CINS_0952
UP..9_1199
CPEL_1091
CA..4_0970
CS..1_1152
CS..3_1258

Annotated functions

Function#Occuringscore
autotransporter domain protein41.14
No annotation data10.00
Hypothetical protein50.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
N149_1457
AB.._00255
AR.._00760
YSQ_01360
YSU_01375
UP..9_1199
CPEL_1091
CS..1_1152
CS..3_1258
1
CINS_0952

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
N149_1457
AB.._00255
AR.._00760
YSQ_01360
YSU_01375
UP..9_1199
CPEL_1091
CS..1_1152
CS..3_1258
1
CINS_0952

15-537360

15-537360 : N149_1457 [tract entry] [top]

Function: Hypothetical protein
+0 MKLSYHTSKVLMSVSISALLSSAALAQEITIADGDGSMENHFETNDGQHFTLKNDYTNGNLTININNTDIPNSIAKEGYEDLATVNINLGSNDLAIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGRSIVNGDFNIKGSSAPTEGVLDDIKSSAILIGDGYGLQGSLEVNGNFTADQSTLFTVGGNKSQNHIQING
+200 KANITNSNFSIGATSFGDLALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSNKDLGLDYEVVRAMDIKDFIEYKLSTKDNKLLISGGANKNVN
+300 NNKMILENDKKYLELIKTDLEGAKNEEGTNKEKIDEAIAKIDEQIKQIQDMISNAGDQIISNDDYIKNDSSVSASNKDFVSKILDGLALGKDFNAIGSIK
+400 FDKAGEQIANDIKDSAKSISNINQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQMRFAANDYRGNYVDNYENSIWGNVIGGTNIIDGDSSALY
+500 GATIGMDRKINDDAIIGAYFTYVNAEIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISTTDQDITNRGFNTTNSADFNRKFLGLSANMGYVFDF
+600 SDNTLFVKPFAGANYYYAYTPSYKENGIAGKNVDSASNNSLSLELGTEIRKYMSEESYLFITPKIEQYVMNNGDDFVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNIDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQLGFKYKF

[show detailed alignment]

BFR-CA-9557

BFR-CA-9557 : AB430_00255 [tract entry] [top]

Function: hypothetical protein
+0 MKLSYHTSKVLMSVSISALLSSAALAQEITIADGDGSMENHFETNDGQHFTLKNDYTNGNLTININNTDIPNSIAKEGYEDLATVNINLGSNDLAIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGRSIVNGDFNIKGSSAPTEGVLDDIKSSAILIGDGYGLQGSLEVNGNFTADQSTLFTVGGNKSQNHIQING
+200 KANITNSNFSIGATSFGNLALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSNKDLGLDYEVVRAMDIKDFIEYKLSTKDNKLLISGGANKNVD
+300 NNKMILENDKKYLELIKTDLEGAKNEEGTNKEKIDEAIAKIDDQIKQIQDMISNAGDQIISNDDYIKNDSSVSASNKDFVSKILDGLTLGKDFNAIGSIK
+400 FDKAGEQIANDIKDSAKSISNINQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQMRFAANDYRGNYVDNYENSIWGNVIGGTNIIDGDSSALY
+500 GATIGMDRKINDDAIIGAYFTYVNAEIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISTTDQDITNRGFNTTNSADFNRKFLGLSANMGYVFDF
+600 SDNTLFVKPFAGANYYYAYTPSYKENGIAGKNVDSTSNNSLSLELGTEIRKYMSEESYLFITPKIEQYAMNNGDDFVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNIDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQLGFKYKF

[show detailed alignment]

HC2-48

HC2-48 : AR446_00760 [tract entry] [top]

Function: hypothetical protein
+0 MKLSYHTSKVLMSVSISALLSSAALAQEITIADGDGSMENHFETNDGQHFTLKNDYTNGNLTININNTDIPNSIAKEGYEDLATVNINLGSNDLAIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGRSIVNGDFNIKGSSAPTEGVLDDIKSSAILIGDGYGLQGSLEVNGNFTADQSTLFTVGGNKSQNHIQING
+200 KANITNSNFSIGATSFGDLALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSNKDLGLDYEVVRAMDIKDFIEYKLSTKDNKLLISGGANKNVD
+300 NNKMILENDKKYLELIKTDLEGAKNEEGTNKEKIDEAIAKIDEQIKQIQDMISNAGDQIISNDDYIKNDSSVSASNKDFVSKILDGLTLGKDFNAIGSIK
+400 FDKAGEQIANDIKDSAKSISNINQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQMRFAVNDYRGNYVDNYENSIWGNVIGGTNIIDGDSSALY
+500 GATIGMDRKINDDAIIGAYFTYVNAEIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISTTDQDITNRGFNTTNSADFNRKFLGLSANMGYVFDF
+600 SDNTLFVKPFAGANYYYAYTPSYKENGIAGKNVDSTSNNSLSLELGTEIRKYMSEESYLFITPKIEQYVMNNGDDFVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNIDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQLGFKYKF

[show detailed alignment]

RM1875

RM1875 : YSQ_01360 [tract entry] [top]

Function: hypothetical protein
+0 MKLSYHTSKVLMSVSISALLSSAALAQEITIADGDGSMENHFETNDGQHFTLKNDYTNGNLTININNTDIPNSIAKEGYEDLATVNINLGSNDLAIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGRSIVNGDFNIKGSSAPTEGVLDDIKSSAILIGDGYGLQGSLEVNGNFTADQSTLFTVGGNKSQNHIQING
+200 KANITNSNFSIGATSFGDLALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSNKDLGLDYEVVRAMDIKDFIEYKLSTKDNKLLISGGANKNVD
+300 NNKMILENDKKYLELIKTDLEGAKNEEGTNKEKIDEAIAKIDEQIKQIQDMISNAGDQIISNDDYIKNDSSVSASNKDFVSKILDGLALGKDFNAIGSIK
+400 FDKAGEQIANDIKDSAKSISNINQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQMRFAANDYRGNYVDNYENSIWGNVIGGTNIIDGDSSALY
+500 GATIGMDRKINDDAIIGAYFTYVNAEIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISTTDQDITNRGFNTTNSADFNRKFLGLSANMGYVFDF
+600 SDNTLFVKPFAGANYYYAYTPSYKENGIAGKNVDSASNNSLSLELGTEIRKYMSEESYLFITPKIEQYVMNNGDDFVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNIDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQLGFKYKF

[show detailed alignment]

RM5611

RM5611 : YSU_01375 [tract entry] [top]

Function: hypothetical protein
+0 MKLSYHTSKVLMSVSISALLSSAALAQEITIADGDGSMENHFETNDGQHFTLKNDYTNGNLTININNTDIPNSIAKEGYEDLATVNINLGSNDLAIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGRSIVNGDFNIKGSSAPTEGVLDDIKSSAILIGDGYGLQGSLEVNGNFTADQSTLFTVGGNKSQNHIQING
+200 KANITNSNFSIGATSFGDLALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSNKDLGLDYEVVRAMDIKDFIEYKLSTKDNKLLISGGANKNVD
+300 NNKMILENDKKYLELIKTDLEGAKNEEGTNKEKIDEAIAKIDEQIKQIQDMISNAGDQIISNDDYIKNDSSVSASNKDFVSKILDGLTLGKDFNAIGSIK
+400 FDKAGEQIANDIKDSAKSISNINQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQMRFAVNDYRGNYVDNYENSIWGNVIGGTNIIDGDSSALY
+500 GATIGMDRKINDDAIIGAYFTYVNAEIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISTTDQDITNRGFNTTNSADFNRKFLGLSANMGYVFDF
+600 SDNTLFVKPFAGANYYYAYTPSYKENGIAGKNVDSTSNNSLSLELGTEIRKYMSEESYLFITPKIEQYVMNNGDDFVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNIDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQLGFKYKF

[show detailed alignment]

NCTC 12927

NCTC 12927 : CINS_0952 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYFASKVLIGFSIGALLSSNALASKITIKDGDGSMEKHFETNDGQHFALKKEHTNSDLTIEINDTDLPNSIAKEGYEDLATVSIDLGSNDLTIKNIS
+100 SGNLSTAVSNYTITANKTEATNVIFQSMNGKSIVNGDFSIKGSSEPTEGVFDYMKSSAIFIADGHGLQGSLEINGNFTADKSILATIGGNKSQNHIQVNG
+200 KANITNSNFSIGTTSFGDLALNNYVFMSASEGFNKDITSSNKASANISKSLESIVGMSTKDLGLDYEDTKAMDVKEFVDYKLSTKDNKLLISGGANKNVL
+300 DNKKVLESDKKYLELIKKDLKKEEENGNKDKIDEAIAKLDKQIQQIDEMIKNTSGGIISNDDYIKNDSSVSASNKNFVSKILDGLTLGKDFNAIGNIKFD
+400 KVGEQVANDIKDSAKSISNVNQASSGINSTINVSNDVSIGSRVAMLNNPYGNYATKLSQIRFATNDYGGNYVDNYNNSIWGNIIGGANIIDGDSGALYGA
+500 TIGMDRKINDDVIIGAYFTYANAKIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQFSPTDQDIVNRGFNTTNSADFNRKFFGLSANMGYVFDFSD
+600 NTLFVKPFTGANYYYAHTPSYKENGIAGKDVSSASNNSISLEFGAELRKYMSEESYLFITPKIEQYVINNGDDFVASLNGVTLPSVKGNDKKKTYGQIIV
+700 GGNVDISEQFSLNAGIGAKQILAGKTDGKNETYISGQVGFKYKF

[show detailed alignment]

NCTC 11845

NCTC 11845 : UPTC3659_1199 [tract entry] [top]

Function: No annotation data
+0 MKLSYHTSKVLMGVSISALLSNAILAQEITIYDSTMNQYFETSDGRNFNLKKDYTNSDLTLDLYYTDLANAIAKDEYKDLSRVNINMGSNNLTFKNTSEG
+100 ASYVTNYTINAKKTEATDVIFQSLDGKSIVNGDFSIKGSSNLVEGVLDDVKSSAILIADGHGLQGSLEVNGNFTADKSTLFTIGGNKSQNHIQVNGKANI
+200 TNSNFSIGTTSFGDLALNNYVFMSASEGFNEDIIDSNKASANMSKSFENIVGMSSKDLGLNYEVVRAIDVKDFVKYELSTKDNKLLISGGANENVNNNKM
+300 ILESDKKYLELIKTDLEDAKDEEGVNIEKIDEAIAKIDEQIKQIQDMISNAGSGEISNDDYIKNDSSVSASNKDFVSKILDGLKLMQ

[show detailed alignment]

LMG 23910

LMG 23910 : CPEL_1091 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYHTSKVLMGVSISALLSSAVLAQEITINDSTMNQYFETSDGRNFNLKKDYTNGDLTLNLFHTDLANSIVNDKYKDLSRVNINLNSNNLTFKNTSES
+100 ASYVTNYTINAKKTEATDVIFQSLDGKSIVNGDFSIKGSSNPVEGVLDDVKSSAILIADGHGLQGSLEVNGNFTADKSTLFTIGGNKSQNHIQVNGKANI
+200 TNSNFSIGTTSFGDLALNNYVFMSASEGFNEDITNSNKASANISKNFESIVGMSSKDLGLDYEVVRAIDVKDFVKYELSTKDNKLLISGGANKNVNNNKM
+300 ILESDKKYLELIKTDLEDAKDDEGVNKEKIDEAIAKIEEQIKQIQEMISNAGDGEISNDDYIKNDSSVSASNKDFVSKILDGLKLGGDFNAIGSIKFDKA
+400 GEQVANDIKDSAKSISNVNQASSGINSTINVSNDVSIGSRVAMLNNPYGNYATKLSQIRFAANDYMGNYVDNYKNSIWANVIGGANIIDGDSGALYGATI
+500 GMDRKINDETIIGAYFTYANAKIKDNLLTQKSDNFQFGAYSNIYITPKVEVNVKAYAQISPTNQDIINRGFNTINSADFNRKFFGLNANVGYVFDFSNNT
+600 LFIKPFAGTNYYYGHTPSYKENGIAGKDVNSASNNSISLELGAEFRKYMSETSYLFITPKIEQYVMNNGDDYVASLNGVALPSVKSNDKKKTYGQIIIGG
+700 NVDINEQFSLNAGIGAKQILAGKTDNKNETYVSGQVGFKYKF

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_1152 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYYTSKVLMGVSISALLSGAALAQEITIADGDGSMEQHFETNDGQHFTLKNDYTNGNLTININNTDLPNSIAKEGYEDLATVNINLGSNDLTIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGKSIINGDFSIKGSSNPTEGVLDDIKSSAILIGDGHGLQGSLEVNGNFTADQSTLFTIGGNKSQNHIQVNG
+200 KANITNSNFSIGTTSFGNLALNNYVFMSASGGFNEDITSSNKASANISKSFESIVGMSNKDLGLDYEVIRAMDVKDFVDYKLSTKDNKLLINGGANENVL
+300 DNKKVLESDKKYLTLVKTDLEKAQNDEGANKEKIKEAIAKIDEQIKQIQEMINNAPSGTISNDDYVKNDSSVSVSNKDFVSKILDGLALGKDFNAIGSIK
+400 FDKVGEQVTNDIKDSAKSISNVNQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQIRFATNDYRGNYVDNYNNSIWGNVIGGANIIDGDSGALY
+500 GATIGMDRKINDDVIIGAYFTYANAKIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISPTDQDIINRGFNTTNSADFNRKFFGLSANMGYVFDF
+600 SDNTLFIKPFAGANYYYAHTPSYKENGIAGKDVSSASNNSISLELGAEFRKYMSKESYLFITPKIEQYVMNNGDDYVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNVDINEQFSLNAGIGAKQILAGKTDGKNETYVSGQIGFKYKF

[show detailed alignment]

LMG 24377

LMG 24377 : CSUB8523_1258 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYYTSKVLMGVSISALLSGAALAQEITIADGDGSMEQHFETNDGQHFTLKNDYTNGNLTININNTDLPNSIAKEGYEDLATVNINLGSNDLTIKNIS
+100 HGDISTYVTNYTINAKKTEAIDVIFQSTNGKSIINGDFSIKGSSNPTEGVLDDIKSSAILIGDGHGLQGSLEVNGNFTADQSTLFTIGGNKSQNHIQVNG
+200 KANITNSNFSIGTTSFGNLALNNYVFMSASGGFNEDITSSNKASANISKSFESIVGMSNKDLGLDYEVIRAMDVKDFVDYKLSTKDNKLLINGGANENVL
+300 DNKKVLESDKKYLTLVKTDLEKAQNDEGANKEKIKEAIAKIDEQIKQIQEMINNAPSGTISNDDYVKNDSSVSVSNKDFVSKILDGLALGKDFNAIGSIK
+400 FDKVGEQVTNDIKDSAKSISNVNQASSGINSTINISNDVSIGSRVAMLNNPYGNYATKLSQIRFATNDYRGNYVDNYNNSIWGNVIGGANIIDGDSGALY
+500 GATIGMDRKINDDVIIGAYFTYANAKIKDNLLTQKSDNFQFGAYSNIYISPKVEVNVKAYAQISPTDQDIINRGFNTTNSADFNRKFFGLSANMGYVFDF
+600 SDNTLFIKPFAGANYYYAHTPSYKENGIAGKDVSSASNNSISLELGAEFRKYMSKESYLFITPKIEQYVMNNGDDYVASLNGVALPSVKSDDKKKTYGQI
+700 IIGGNVDINEQFSLNAGVGAKQILAGKTDGKNETYVSGQVGFKYKF

[show detailed alignment]