Gene group 233

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
233CFT03427_0957type III restriction/modification system, mod subunit446
CF..7_0957
CR44_04865
CHL_1051
CHH_1055
CI..3_0014
CI..3_0145

Annotated functions

Function#Occuringscore
type III restriction/modification system, mod subunit21.09
No annotation data20.00

03-427

03-427 : CFT03427_0957 [tract entry] [top]

Function: No annotation data
+0 MDSNELLNDIECKFKTLLNAKSLAISNDSKILSFLLTESKFKNEYKDMFFEIHKSNEQNIAIFKQNAFFEFLDTRVLGNSYTAYSNKIGLTNAINKFIKS
+100 NEQVVLSFPFKDGVIKGSQSKDEDKTNEIFFNNILDKSEIDVLFAKKALYNFELISADEQNLQDILANGGGVEHNLLIKGNNLLALHCLKERFANKVKLI
+200 YIDPPYNTSNDSFNYNDRFSHSTWLTFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVACFIPLMNPRGRQESSYPIAKSHEYILCY
+300 SKKEDLATFFNFGIIKNDEINDEFRLLSLRKSGNASLRKDRPNMFYPIFIIQIHNLFIQNKEMINLKLLFIQLKLTQKKVDGDGKSQM

[show detailed alignment]

pet-3

pet-3 : CR44_04865 [tract entry] [top]

Function: No annotation data
+0 MDSNELLNDIECKFKTLLNAKSLAISNDSKILSFLLTESKFKNEYKDMFFEIHKSNEQNIAIFKQNAFFEFLDTRVLGNSYTAYSNKIGLTNAINKFIKS
+100 NEQVVLSFPFKDGVIKGSQSKDEDKTNEIFFNNILDKSEIDVLFAKKALYNFELISADEQNLQDILANGGGVEHNLLIKGNNLLALHCLKERFANKVKLI
+200 YIDPPYNTSNDSFNYNDRFSHSTWLTFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVACFIPLMNPRGRQESSYPIARSHEYILCY
+300 SKKEDLATFFNFGIIKNDEINDEFRLLSLRKSGNASLRKDRPNMFYPIFYNTNTQSIYTKQRNDKSEITIYPIKTNAEEGRWRWQKSNVENNINLLVCKE
+400 NSKGEYDIYVKDYIVKDGQTKGEKTKTFIIDKNIINDKAKEHMEILFGRNELFSYPKSEFLMQRIIEISTQENDIVMDFFAGSGTTLAVAMKMNRKFIGI
+500 EQMDYIKTITCERLKKVIAGEQGGISKAVGWNGGGNFIYSELMPLNATFKDKIINAKNENELNQIYDELKAKAFLDYRVEFDKFDEEFNKLSLEDKKKNL
+600 LLTMDKNMDYVLFDDIEDKNYNIDENCIKINKAFYGQNNG

[show detailed alignment]

CCUG 27631

CCUG 27631 : CHL_1051 [tract entry] [top]

Function: type III restriction/modification system, mod subunit
+0 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSQYKNEYKERFFQTQYGALIFKKDEFLNFLDLRLLSFSYTSFSNKIGLGVSEKRFLKNSEN
+100 VVLNFPFKDCVLKGAQSKDDEKNTELFFNNILAKSEIDVLFAPKVLNKFELIGGGDLETTLKNRPNLLIKGNNLIALHSLKEYFRHQSEQNKVKLIYIDP
+200 PYNTGSDSFNYNDRFNHSTYLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCSIFEKVKIRKNSAKYFSESHEYILIFSKHKE
+300 NWNRNLLPRKDTSGYKNPDNDPRGVWIPVPIHANHVYEADYKITKPNGVVLEKPKNNSWRLSEENFKKHVEENRIWWGKDNSYPMIKKFLSEVQDGLVPR
+400 TIFYYDETGGGPAGDKALKDLFEGNKVFDNPKPEKLLEQILEISTQENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIESITKERLKKVIEGEQGGI
+500 SKAVSWSGGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDDEFSNLDFTSKKRILKKCLDRNMDYIPYADIKDSEYKI
+600 DEQTRVLNDIFYKGGNDE

[show detailed alignment]

LMG 9260

LMG 9260 : CHH_1055 [tract entry] [top]

Function: type III restriction/modification system, mod subunit
+0 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQTQYGALIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLKNSQN
+100 VVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGGQNDTLENVLKNKPNLLIKGNNLIALHTLKEHFHHQSEQNKVKLIY
+200 IDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCFVCVSAPAGTQSSVFVAQQHNYCLSYAK
+300 NKNSLKLFNIKLTEQELKEKYKEKDEYGNFYSERIWKRGEGGRMEDVPSLHFPVYYDKEQDKIFIDDENSNTKNLIKIIPYQTKGVLGRWTWSREKMKNE
+400 RHKLRVKIVNNEYVLHKKLYSHEDKGKLPNSIITSDIARTELGSLEIKEIFNDKVFSYPKSEKLLQYILEISTNENDLVLDFFAGSGTTLAVAHKMKRRY
+500 IGIEQMEYIKSITKERLKKVIEGEQGGISKAVNWQGGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDMEFSNLDFIE
+600 KKRILKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGNDE

[show detailed alignment]