Gene group 63

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
63JJD26997_0405methyltransferase8823
JJ..7_0405
JJ..7_0404
IC..1_1256
Cj..6_1326
Cj..6_1327
Cj..7_1326
Cj..7_1327
CINS_1273
CINS_1274
UP..0_1297
UP..0_1298
CONCH_1272
CONCH_1273
UP..9_1533
UP..9_1534
UP..1_1291
UP..1_1292
UP..2_1313
UP..2_1314
CS..1_1500
CS..1_1501
CS..3_1596
CS..3_1597

Annotated functions

Function#Occuringscore
methyltransferase40.67
hypothetical protein30.00
conserved hypothetical protein10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
JJ..7_0405
IC..1_1256
Cj..6_1326
Cj..7_1326
1
UP..1_1291
UP..2_1313
CS..1_1500
CS..3_1596

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
JJ..7_0405
IC..1_1256
Cj..6_1326
Cj..7_1326
1
UP..1_1291
UP..2_1313
CS..1_1500
CS..3_1596

269.97

269.97 : JJD26997_0405 [tract entry] [top]

Function: hypothetical protein
+0 MDLIRWFFKKNLDKLHNAKVLEFASHNGNNLSLFANYNYYCTGVELDQKNYENAIYNFKKIMKYNKFKFYNENMLDFATNFKNLNANVFLIPNVINYISK
+100 NDFKNMLSNVRTNHLYKYGGGGYESFLFLKARSIKDHRYGLGKSVGNGSFILENDEFSGEKNCLCTAYQEHELVEILQKYLNLYDFEVITSENINIKNKV
+200 YIKDSDIVIYGKIK

[show detailed alignment]

ICDCCJ07001

ICDCCJ07001 : ICDCCJ07001_1256 [tract entry] [top]

Function: conserved hypothetical protein
+0 MDLIRWFFKKNLDKLHNAKVLEFASHNGNNLSLFANYNYYCTGVELDQKNYENAIYNFKKIMKYNKFKFYNENMLDFATNFKNLNANVFLIPNVINYISK
+100 NDFKNMLSNVRTNHLYKYGGGYESFLFLKARSIKDHRYGLGKSVGNGSFILENDEFSGEKNCLCTAYQEHELVEILQKYLNLYDFEVITSENINIKNKVY
+200 IKDSDIVIYGKIK

[show detailed alignment]

RM3196

RM3196 : CjjRM3196_1326 [tract entry] [top]

Function: hypothetical protein
+0 MDLIRWFFKKNLDKLHNAKVLEFASHNGNNLSLFANYNYYCTGVELDQKNYENAIYNFKKIMKYNKFKFYNENMLDFATNFKNLNANVFLIPNVINYISK
+100 NDFKNMLSNVRTNHLYKYGGGYESFLFLKARSIKDHRYGLGKSVGNGSFILENDEFSGEKNCLCTAYQEHELVEILQKYLNLYDFEVITSENINIKNKVY
+200 IKDSDIVIYGKIK

[show detailed alignment]

RM3197

RM3197 : CjjRM3197_1326 [tract entry] [top]

Function: hypothetical protein
+0 MDLIRWFFKKNLDKLHNAKVLEFASHNGNNLSLFANYNYYCTGVELDQKNYENAIYNFKKIMKYNKFKFYNENMLDFATNFKNLNANVFLIPNVINYISK
+100 NDFKNMLSNVRTNHLYKYGGGYESFLFLKARSIKDHRYGLGKSVGNGSFILENDEFSGEKNCLCTAYQEHELVEILQKYLNLYDFEVITSENINIKNKVY
+200 IKDSDIVIYGKIK

[show detailed alignment]

RM16701

RM16701 : UPTC16701_1291 [tract entry] [top]

Function: methyltransferase
+0 MFINKIKGFKYPDMELVRWFFKNKLDTLKNAKVLEFASHNGNNLSLFANYDYECIGVELSKQNHKNATYNFKEIMHYQKASFFNENMLDFAKNHQNINAD
+100 VFLIPNVINYISKDEFKNLLQDAKQNNLYRVSGGGYAHFFLRARSTKDHRYGLGEKLENGSFILSGDEFSGEKNCLCTAYQEHELVEILKKYLNLYDFEV
+200 ITSENINIKNKVYIKDSDIIIYGKITKG

[show detailed alignment]

RM16712

RM16712 : UPTC16712_1313 [tract entry] [top]

Function: methyltransferase
+0 MFINKIKGFKYPDMELVRWFFKNKLDTLKNAKVLEFASHNGNNLSLFANYDYECIGVELNKQNHENAIYNFKEIMHYQNASFFNENMLDFAKNHQNINAD
+100 VFLIPNVINYISKDEFKTLLQNAKENNLYQSNGGGYAHFFLRARSTKDHRYGLGKKLKNGSFILTHDDFSGEKDCLCTAYQEYELVEILKEYLSLYDFEV
+200 ITSENINIKNKVYIKDSDIIIYGKITKD

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_1500 [tract entry] [top]

Function: methyltransferase
+0 MFINKIKGFKYPDMELVRWFFKNKLDTLKNAKVLEFASHNGNNLSLFANYDYECIGVELSKQNHENAIYNFKEIMQHQKASFFNKNMLDFAKNHQNINAD
+100 VFLIPNVINYITKDEFKNLLQDVKQNNLYQANGGGGYAHFFLRARSIKDHRYGLGEKLENGSFILSGDEFSGEKNCLCTAYQEYELVEILKENLNLYDFE
+200 VITSENINIKNKVYIKDSDIIIYGKITKE

[show detailed alignment]

LMG 24377

LMG 24377 : CSUB8523_1596 [tract entry] [top]

Function: methyltransferase
+0 MFINKIKGFKYPDMELVRWFFKNKLNTLKNAKVLEFASHNGNNLSLFANYDYECIGVELSKQNHENAIYNFKEIMQHQKASFFNKNMLDFAKNHQNINAD
+100 VFLIPNVINYITKDEFKNLLQDAKQNNLYQANGGGGYAHFFLRARSIKDHRYGLGEKLENGSFILSGDEFSGEKNCLCTAYQEYELVEILKENLNLYDFE
+200 VITSENINIKNKVYIKDSDIIIYGKITKE

[show detailed alignment]