CPEL_1564 vs: CPEL_1273 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 2733bp / 911aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1947.00 bits: 843.68 e-value: 0.000000
length: 1058 gaps: 184 id: 555 positives: 638 coverage: 0.61 query coverage 0.54

CPEL_1564 +1 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +100
MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHI GNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN
CPEL_1273 +1304168 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +1304465

CPEL_1564 +101 IAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKV +200
IAHGTNKSTIAG+LNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSN+DMNKFANMKTFEQGA+FSPVFKP K G V+NMGNINANDVLLIG KV
CPEL_1273 +1303868 IAHGTNKSTIAGVLNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANMKTFEQGATFSPVFKPQ-KAGSVVNMGNINANDVLLIGHKV +1304165

CPEL_1564 +201 LIQG--YLNTKDKTFNQIKAIDEGKKANIHLVGNEIY--ADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVK-NY---NGINHNNTNFS +300
IQG N KT HLVGN +Y AD A I + +TAK G + + + F + I K NY + HN
CPEL_1273 +1303568 DIQGGKLGNANSKT---------------HLVGNYVYIDADSANLNSI--INVTAKKDGYIQRKMINFANDGYRFGNNVNINKVNYTDNTNVTHNGISSN +1303865

CPEL_1564 +301 NMKYVGIG-------SDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMI-INGNYFTKTFDGQG +400
K + IG ++W + KGWNE D R+I +E++L+ +I+F DN+ I ING +F KT DGQG
CPEL_1273 +1303268 FKKALTIGNMENEKANAIEWRYLIKGWNEGLGDTRSI-DEFKLVGNINF----------------------------DNKLMDPIGINGAFFNKTLDGQG +1303565

CPEL_1564 +401 YTLKNINIDTTKLKYNPSHVGIFGAITST------IKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQDGIHS +500
YTL N+ ID G+FG I I +N DY G + Y+G + NI +S
CPEL_1273 +1302968 YTLSNLLIDG-------NEGGLFGVIQLANIGNLNINTINFDYTNGIPR-----YIGSMAYRTDNANFYNINIS-------------------------- +1303265

CPEL_1564 +501 NISLNNIGDI--SVNNVTFMGGFAGYLQDGIYSNISLNNIGDISVNNVDSTGGFAGYAGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDF +600
NIGD+ + N +GGFAGY+ + NIS+ NI I V+ K + IG + G +N VG+ + F
CPEL_1273 +1302668 -----NIGDLLAAGENAIGVGGFAGYITSSNFNNISIKNIKSIKVDS--------------KAEQLYTAWIG-----GFGGRVDNYPVGSNDPGGAPNVF +1302965

CPEL_1564 +601 SNIYLKNIGNIFNEAKKNDFL-HATAGGFIGYLMEGDTkfenififfnpnikiineTGLSGKFFGALNDKATY-TFNNIHIYHHEKDLANATADKNYW-- +700
NI + IG I+ N + + G F G L G+ + + I + G S +FG L N+HIYH+E DLANATAD+ Y
CPEL_1273 +1302368 KNITISGIGSIYASVGYNYWSNYVSIGSFAGTLYTGN--YLENVYIYFDKGYTIGQNGFSSFYFGKLSPIGRPNALKNVHIYHYENDLANATADQSYEND +1302665

CPEL_1564 +701 ----GSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTI---PNKPSDNDVILASDDLYKDIVDKIITDLYNSNTDKKIYNLYLVNLLDMLKDKANYSN +800
G +KI IHTY D+TQESVYKDFLSKA+TIEKPT PNKPSD DVILASDD+ I + N + + Y +++ D
CPEL_1273 +1302068 FNQNGYIQNKINIHTYTDETQESVYKDFLSKADTIEKPTTPDNPNKPSDSDVILASDDV-------ISANDLNKWLGEILSGKYWIDIKDF--------- +1302365

CPEL_1564 +801 MSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLA-YEKNGLSTASKDKFDAEalnlkntllantnkVIKNKNDLSNFLENDLKNLLINSNQALASLKLSQ +900
K++ +++ E+ QS+ FL A Y + G+ K+ + + KNT + I NK +L F+ + LK L+ SN ALA LK Q
CPEL_1273 +1301768 -----KIQGLSE-----------ELKQSISFLEALYGQKGM----KEILEGISQEYKNTYVKFNQFAI-NKANLLAFINDKLKPLVDSSNNALAQLKTIQ +1302065

CPEL_1564 +901 EQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIEND +1000
EQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIEND
CPEL_1273 +1301468 EQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIEND +1301765

CPEL_1564 +1001 DYQKLSRQIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCVVESY +1058
DYQKLSRQIASSQKQTPTFKYEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVV SY
CPEL_1273 +1301168 DYQKLSRQIASSQKQTPTFKYEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVVGSY +1301339

CPEL_1564 vs: CPEL_1384 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 4005bp / 1335aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1254.00 bits: 544.75 e-value: 0.000000
length: 664 gaps: 81 id: 355 positives: 408 coverage: 0.50 query coverage 0.65

CPEL_1564 +1 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +100
MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHI GNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN
CPEL_1384 +1428382 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +1428679

CPEL_1564 +101 IAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKV +200
IAHGTNKSTIAG+LNA NNVFLINPNGVIITKTGNINANRFVASTSSMS DDM KFAN+ EQ SFSPVFK N K GNV+NMGNINANDVLLIGNKV
CPEL_1384 +1428082 IAHGTNKSTIAGVLNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSSDDMWKFANLSQ-EQAGSFSPVFKAN-KLGNVVNMGNINANDVLLIGNKV +1428379

CPEL_1564 +201 LIQGYL-NTKDKTF-NQIKAIDEGKKANIHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDF-DFIVKNYNGINHNNTNFSNMKYV +300
L++ N K K + NQ+ + N HLVGNE+Y D+A KL ITAK+KGS+YL ATGYYYNP + F + Y G HN+ NF +V
CPEL_1384 +1427782 LLHASAGNDKGKLYLNQVNS------KNTHLVGNEVYVDVANINKNNKLNITAKNKGSIYLSATGYYYNPEALNIFLKYSTPSYGGYKHNDKNFKKAHFV +1428079

CPEL_1564 +301 GIGSDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMII---NGNYFTKTFDGQGYTLKNINIDT +400
I DWWHFAKGWNE N FRT ANEY+L+ +I+F +NYANY +D G +SMI+ N FTK FDGQG+ LK + IDT
CPEL_1384 +1427482 SIANTEDWWHFAKGWNENKNGFRTTANEYKLVSNINF---------ADKNYANYCIDGLG--------CSSMIVGNTKDNAFTKNFDGQGFVLKGMYIDT +1427779

CPEL_1564 +401 TKLKYNPS---HVGIFGAI-TSTIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsL---------QDGIHSNIS +500
L N S +VGIFGA ++ N+NVDY GGGI AK Y+GGF G G + SL N+ + + +G+ NI+
CPEL_1384 +1427182 ANLTNNDSKKHYVGIFGATKEASFTNINVDYSGGGINAKNE-YVGGFAGY-LDGFVDRASLKNLTSLKNDVKVVVDSGYITTYGTGGFAGDANGMFRNIT +1427479

CPEL_1564 +501 LNNIGDISVNNVTF---------------MGGFAGYLQDGIYSNISLNNIGDISV--NNVDS-----------TGGFAGYAGIVKICNISLEKIGNINRI +600
L NI + V +GGFAG + G ISL N+ ++S+ N DS GGFAGY NISL I NIN
CPEL_1384 +1426882 LENIKNFDVKHSAIVDIPGGVYWKHYAYGVGGFAGSIF-GFVDGISLKNVENLSIRENGYDSLNGYASDYFIGLGGFAGYIANGNFSNISLNNIKNINFK +1427179

CPEL_1564 +601 AYNGYE---ENSHVGAFIARVSKVDFSNIYLKNIGNI--FNEAK-KNDFLHATAGGFIGYLMEG +664
+ S +G F R+ F +I LK I + F E N++ GGF G + G
CPEL_1384 +1426582 TIQNVDNIASSSNIGGFAGRIDGGSFEDINLKTIHGLTYFEEDDGNNNYKDLFLGGFAGAIFNG +1426771

Score: 110.00 bits: 51.27 e-value: 0.000000
length: 236 gaps: 57 id: 73 positives: 104 coverage: 0.50 query coverage 0.65

CPEL_1564 +405 GIFGAIT-STIKNVNVDY-----MGGGIKAKSVGY-LGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQDGIHSNISLNNIGDISVNNVTF-- +504
G+F IT IKN +V + + GG+ K Y +GGF G S G + ISL N+ N+S+ G S+N
CPEL_1384 +1426984 GMFRNITLENIKNFDVKHSAIVDIPGGVYWKHYAYGVGGFAG-SIFGFVDGISLKNV-----------------------ENLSIRENGYDSLNGYASDY +1427281

CPEL_1564 +505 ---MGGFAGYLQDGIYSNISLNNIGDI------SVNNVDSTGGFAGYAGIVKICNISLEKIG--NINRIAYNGYEENS--------HVGAFIARVSKVDF +604
+GGFAGY+ +G +SNISLNNI +I V+N+ S+ G+AG +I S E I I + Y +EE+ +G F + F
CPEL_1384 +1426684 FIGLGGFAGYIANGNFSNISLNNIKNINFKTIQNVDNIASSSNIGGFAG--RIDGGSFEDINLKTIHGLTY--FEEDDGNNNYKDLFLGGFAGAIFNGVF +1426981

CPEL_1564 +605 SNIYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGD +640
I L +I N+ N N + A+ GGF G + GD
CPEL_1384 +1426384 NKIALNDIKNL-NMTLHNSSIKASLGGFAGSIDLGD +1426489

Score: 471.00 bits: 206.99 e-value: 0.000000
length: 577 gaps: 70 id: 198 positives: 283 coverage: 0.50 query coverage 0.65

CPEL_1564 +494 TFMGGFAGYLQ-----DGIYSNISLNNIGDISVNNVDS-TGGFAGY------AGIVKICNISLEKIGNINRI-AYNGYEENSHVGAFIARV--------S +593
T +GGFAG + + +Y NI +NNIG+I+ N + GGF G K NI L+ I I G+ + + F+A
CPEL_1384 +1426045 TRIGGFAGTIDVSHGNENLYKNIYMNNIGNITTNSSRANIGGFVGRIGLGDGGVGGKFENIILKNIHSIKSSNGDRGFYDHVNIAGFVADFKSNYYDGYG +1426342

CPEL_1564 +594 KVDFSNIYLKNIGNIF--NEAKKNDFLHATAGGFIGYLMEGDTkfenififfnpnikiineTGLSGKFFGALNDKATYTFNNIHIYHHEKDLANATADKN +693
K++F +I++ I NI N +N ++ GF + D +F+ I T K + DK T NIHIYHHEKD + ++ N
CPEL_1384 +1425745 KIEFNDIFIDGINNISFKNPTTQNSAIY----GFAPSYYDSDRRFKFNNIHVYFHPNTTF-TNNNVKIY-KFSDKITDNMSNIHIYHHEKDFKDIMSNIN +1426042

CPEL_1564 +694 YWGSTNDKIQIHTYADKTQESVYKDFLSK----ANTIEKPTI--PNKPSD-NDVILASDDLY---KDIVDK---IITDLYNSNTDKKIYNL-YLVN--LL +793
+K H Y D ++ Y++F SK IEKP I P P + N IL DL K +DK I ++N K I + Y++N LL
CPEL_1384 +1425445 -----TNKFTTHIYGDDNKDKTYQEFKSKYKFVEPNIEKPNITNPELPQNSNQSILPNLDLILNEKPTLDKDDLISNAVWNDYIIKDIDKIKYVINIRLL +1425742

CPEL_1564 +794 D-MLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASKDKFDAEalnlkntllantnkVIKNKNDLSNFLENDLKNLLINS +893
D +LK+ +N +E+++V+F+ Y L + A ++QSL FL Y+ + A +F+ A + IK+ N N L L
CPEL_1384 +1425145 DKLLKEYKTLANKTEDEQVKFITAY-LGVKENDARALLQSLSFLNTYKDHDINKA---QFENNAKKDFEQSFKKADDKIKDFNKNKNLWHTKLDKL---- +1425442

CPEL_1564 +894 NQALASLKL--------SQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNI +993
N+ + SL L Q +LK I YND++ I++ +N+ ++K + L + L ++ + L+ + + N + +IGKF+
CPEL_1384 +1424845 NKEVVSLGLDIEKQLEQNQAKLKRFIKAYNDFLTLIDKGIKNENDPAFIAIKNNIKELDKEAKLLYAKLSIQENNLQIFKDK---NNNNKVIVIGKFNTS +1425142

CPEL_1564 +994 ALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCVVESY +1070
+ PN++K GIENDDYQKLSRQIASSQKQTPTFKYEEEETQEI+EAA+TQRARTCIVSDNFKTMNPCVV SY
CPEL_1384 +1424545 LINTPNVDKPTQGGGIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIEEAAITQRARTCIVSDNFKTMNPCVVGSY +1424773

Score: 114.00 bits: 52.99 e-value: 0.000000
length: 135 gaps: 18 id: 44 positives: 65 coverage: 0.50 query coverage 0.65

CPEL_1564 +495 FMGGFAGYLQDGIYSNISLNNIGDISVNNVDST-----GGFAGYAGIVKICNISLEKIGNI----NRIAYNGYEENSHVGAFIARVSKV--------DFS +594
F+GGFAG + +G++ I+LN+I ++ + +S+ GGFAG + NI L IGNI + ++ E + G F + + F
CPEL_1384 +1426510 FLGGFAGAIFNGVFNKIALNDIKNLNMTLHNSSIKASLGGFAGSIDLGDYRNILLNDIGNIKIQADSLSTSSTSEGNYFGGFAGSIGQTYLSEFNPPKFN +1426807

CPEL_1564 +595 NIYLKNIGNI-FNEAKKNDFLHATAGGFIGYLMEG +629
NI LKNI NI + K GGF GY+ EG
CPEL_1384 +1426210 NISLKNINNINLIQTKYASGGDLRIGGFAGYINEG +1426312

CPEL_1564 vs: CPEL_1383 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3126bp / 1042aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1156.00 bits: 502.48 e-value: 0.000000
length: 671 gaps: 94 id: 335 positives: 397 coverage: 0.53 query coverage 0.54

CPEL_1564 +1 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +100
MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHI GNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN
CPEL_1383 +1424244 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +1424541

CPEL_1564 +101 IAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKF-----ANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLL +200
IAHGTNKSTIAG+LNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSN+DMNKF AN KT + A+FSPVFK N K GNV+NMGNINANDVLL
CPEL_1383 +1423944 IAHGTNKSTIAGVLNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANGQYANGKTIDY-ATFSPVFKAN-KLGNVVNMGNINANDVLL +1424241

CPEL_1564 +201 IGNKVLIQG----YLNTKDKTFNQIKAIDEGKKANIHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGI-NHNNTN +300
IG KV I G + + + + +K + +HLVGNE+ + K + +A KG+L T YY +F + Y+ I N N
CPEL_1383 +1423644 IGHKVSIDGGNIHGMHNANTSGDALKNPSNNTASKVHLVGNEVNIQVDGIKS-NSIIASAYSKGALQQSTTSYYNYGNNIGKLNFTTQEYDNIENKANKQ +1423941

CPEL_1564 +301 FSNM----KYVGIGSDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMII---NGNYFTKTFDGQ +400
K+ IGSDVDWWHFAKGWN N+ R Y+L DIDF N G+NYANY + + TSMII N F K FDGQ
CPEL_1383 +1423344 LVTKDKFEKHATIGSDVDWWHFAKGWNYDRNNMRDFFGTYKLTSDIDFGGN------QGKNYANYCM--------SQGQCTSMIIGNAGNNAFNKNFDGQ +1423641

CPEL_1564 +401 GYTLKNINIDTTKLKYNPSHVGIFGAIT-STIKNVNVDYMGGGIKAKSVGYLGGFVGLS-YAGALL-NISLSNMgyfsftggsfiggfagsLQDGIHSNI +500
G+TLKNIN+D + Y GIFG ++ S I+N+ VDYMGG I V Y+GGFVG S + G+ +IS+ N+ + SF G + G + I
CPEL_1383 +1423044 GFTLKNINMDVENIDY----AGIFGNVSYSDIRNIKVDYMGGRINGNNVRYMGGFVGNSLHNGSFFSDISIKNIDFINNNSNSFFIGGFAGIAGGNFTKI +1423341

CPEL_1564 +501 SLNNIGDI-----------------------------------SVNNVTFMGGFAGYLQDGIY-SNISLNNIGDISVNNVDSTGGFAGYAGIV----KIC +600
++NI +I VN GGFAG L G Y N+ + NI ++ V+ + G G + K
CPEL_1383 +1422744 YIDNINNILGKSSSGYGGIGGFAGNARGNFENIAINSINNITLKVNGPAHAGGFAGQLFTGEYVKNVYMENIKNVKVDAAGAFAAVGGMFGEIGNNTKFD +1423041

CPEL_1564 +601 NISLEKIGNI---NRIAYNGYEENSHVGAFIARVSKVD--FSNIYLKNIGNIFNEAKKNDFLHATAGGFIG +671
I ++ + NI N+ A G S+ G+F R KV F NI ++ NI A + A AGGF+G
CPEL_1383 +1422444 HIYIKGLENIYVDNKYAQAG----SYAGSFAGRSYKVTAVFQNIAIEGKININANATQS----AYAGGFLG +1422654

Score: 825.00 bits: 359.69 e-value: 0.000000
length: 380 gaps: 53 id: 222 positives: 253 coverage: 0.53 query coverage 0.54

CPEL_1564 +652 NIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTI--------PNKPSDNDVILASDDLYK-DIVDKIITDLYNSNTD +751
N IYH+ D +KN + DKI IHTY D+TQ YKDFLSKANTIEKPTI PN+PSD DVILASDD+ + ++K + +++ N
CPEL_1383 +1422129 NANIYHYINDF-----NKNDY--IQDKINIHTYTDETQANAYKDFLSKANTIEKPTITPPTTPDNPNQPSDSDVILASDDVISANDLNKWLGEIFGGNYW +1422426

CPEL_1564 +752 KKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASKDKFDAEalnlkntllantnkVIKNKNDLSNFL +851
I + + L + LK Q + F+ + + LE ++ D+ +AY K DKF K +L F+
CPEL_1383 +1421829 VDIKDFKIQGLSEELK-----------QSISFLEALYGQKGMKEILEKIHN-DYKMAYSK-------YDKFKTS------------------KANLLAFI +1422126

CPEL_1564 +852 ENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKF +951
+ LK L+ SN ALA LK QEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQ +A SN +F I GK
CPEL_1383 +1421529 NDKLKPLVDSSNNALAQLKTIQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQGKANVDSNGHFTIKGKL +1421826

CPEL_1564 +952 DNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCVVESY +1031
+NIALTIPNLEKLNNS GIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVV SY
CPEL_1383 +1421229 NNIALTIPNLEKLNNSGGIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVVGSY +1421466

CPEL_1564 vs: CPEL_1035 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3408bp / 1136aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1500.00 bits: 650.87 e-value: 0.000000
length: 680 gaps: 97 id: 385 positives: 439 coverage: 0.53 query coverage 0.59

CPEL_1564 +1 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +100
MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHI GNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN
CPEL_1035 +1062654 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +1062951

CPEL_1564 +101 IAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKV +200
IAHGTNKSTIAG+LNASGNNVFLINPNGVIITKTGNINANRFVASTSSM M +FANMKTF G +FSPVFKPNPKGGNVINMGNINANDV L GNKV
CPEL_1035 +1062954 IAHGTNKSTIAGVLNASGNNVFLINPNGVIITKTGNINANRFVASTSSMDSKAMQEFANMKTFNDGLAFSPVFKPNPKGGNVINMGNINANDVTLQGNKV +1063251

CPEL_1564 +201 LIQGYLNTKDKTFNQIKAIDEGKKANIHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGIN--HNNTNFSNMKYVG +300
L+Q + DK N IK +++ N+ + NE Y D+AT K K+ ITA +KG YL ATGYYYNP + YN N N N + +++
CPEL_1035 +1063254 LLQAET-SLDKDTNNIK-LNQITTDNLTIKANEAYVDVATTK-TNKINITA-NKGNAYLSATGYYYNPK---------RQYNEFNSINNKINKTYNQFIS +1063551

CPEL_1564 +301 IGSDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMIINGNY---FTKTFDGQGYTLKNINIDTT +400
IGSDVDWWHFAKGWNE NDFRTIA EYRLINDI+F ANCKNG+CTGQNYANYWVDLN DGIKQDNEFTSMI+ +Y F+K FDGQGYTLKNINIDTT
CPEL_1035 +1063554 IGSDVDWWHFAKGWNE-SNDFRTIASEYRLINDINFNANCKNGICTGQNYANYWVDLNADGIKQDNEFTSMIVGEDYNSEFSKNFDGQGYTLKNINIDTT +1063851

CPEL_1564 +401 KLKYNPSHVGIFG-AITSTIKNVNVDYMGGGIKAKSVGYL-GGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQDGIHSNISLNNIGDISVNNV +500
KL N + GIFG A +T KN+NVDYMGG + +GY GF+ S N+ +SN+G S G + NI +NNI +IS
CPEL_1035 +1063854 KLD-NTYYAGIFGDARNATFKNINVDYMGGSV----IGYYAAGFIASSSDSKFYNMKISNIGLIQARHRSGGFIADAY--RGAYYNIHINNIKEISGKAA +1064151

CPEL_1564 +501 TFMGGFAGY-------LQDGIY-SNISLNNI-----------------------------------------GDISV----NNVDSTGGFAGYAGI---- +600
+ GGF G+ +D +Y +I ++NI GD + +N GGF G G+
CPEL_1035 +1064154 S--GGFVGFYSQPDSNYKDNVYFQDIYIDNINTIRDEDGHAGGFAGDLYSIYAGRTILKNIYINNINSIFASGDYGIYGGKDNTAKAGGFVGSIGLYGGG +1064451

CPEL_1564 +601 -VKICNISLEKIGNINRIAYNGYEENSHVGAFIARV--SKVDFSNIYLKNIGNIFNEAKKNDFL--HATAGGFIGYLMEG +680
I N+S+ IG I + + + G F + F NI L NI NI E D L A++GGF GY+ G
CPEL_1035 +1064454 AYDIFNVSINNIGTIKSLG-----KITATGGFAGELLGGGAKFENISLNNIKNIISENNNKDSLGRSASSGGFAGYITGG +1064691

Score: 569.00 bits: 249.26 e-value: 0.000000
length: 607 gaps: 117 id: 221 positives: 295 coverage: 0.53 query coverage 0.59

CPEL_1564 +479 NISLNNIGDI-SVNNVTFMGGFAGYLQDG--IYSNISLNNIGDI--------SVNNVDSTGGFAGYAGIVKICNISLEKIGNINRIAYNGY--EENSHVG +578
N+S+NNIG I S+ +T GGFAG L G + NISLNNI +I S+ S+GGFAGY NISL IG I I + E + G
CPEL_1035 +1064400 NVSINNIGTIKSLGKITATGGFAGELLGGGAKFENISLNNIKNIISENNNKDSLGRSASSGGFAGYITGGYFNNISLNNIGTIKSIKTDTSHKEVGIYSG +1064697

CPEL_1564 +579 AFIARVSKVDFSNIYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGDTkfenififfnpnikiineTGLSGKFFGALNDKATY--TFNNIHIYHHEKDLA +678
F+ ++ Y NI NIF + + A+ G LSGKFFG + + + + F NI IYHHE DL
CPEL_1035 +1064700 GFVGFLT-------YRANINNIFMFMDQGASILASGG----------------------------SESLSGKFFGMIKEVSDFGINFSNINIYHHENDLT +1064997

CPEL_1564 +679 NATADKNYW--------GSTNDKIQIHTYADKTQESVYKDFLSKANTI-----------------------EKPTIPNKPSDNDVILAS------DDLYK +778
NATAD+ YW N +I IHTY DKTQ Y DF +A TI EKPTI + D IL DDL
CPEL_1035 +1065000 NATADQAYWKNNLINFNANINGEINIHTYTDKTQG--YTDFKKQALTIDGLKEIDCDNGKKCLIFTTDFDIEKPTITSPIPNLDSILNEKPTLNKDDLIS +1065297

CPEL_1564 +779 DIV--DKIITDLYNSNTDKKIYNLYLVNLLD-MLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASKDKFDAEalnlknt +878
+ V D II D+ KI + + LLD +LK+ +N +E+++V+F+ Y L + A ++QSL FL AY+ + A +F+ A
CPEL_1035 +1065300 NAVWNDYIIKDI------DKIKYVINIRLLDKLLKEYKTLANKTEDEQVKFITAY-LGVKENDARALLQSLSFLNAYKDHDINKA---QFENNAKKDFEQ +1065597

CPEL_1564 +879 llantnkVIKNKNDLSNFLENDLKNLLINSNQALASLKL--------SQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIA +978
+ IK+ N N L L N+ + SL L Q +LK I YN+++ I++ +N+ ++K + L + L ++
CPEL_1035 +1065600 SFKKADDKIKDFNKNKNLWHTKLDKL----NKEVVSLGLDIEKQLEQNQAKLKRFIKAYNEFLTLIDKGIKNENDPAFIAIKNNIKELDKEAKLLYAKLS +1065897

CPEL_1564 +979 NNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMN +1078
+ L+ + + N + +IGKF+ + PN++K GIENDDYQKLSRQIASSQKQTPTFKYEEEETQEI+EAA+TQRARTCIVSDNFKTMN
CPEL_1035 +1065900 IQENNLQIFKDK---NNNNKVIVIGKFNTSLINTPNVDKPTQGGGIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIEEAAITQRARTCIVSDNFKTMN +1066197

CPEL_1564 +1079 PCVVESY +1085
PCVV SY
CPEL_1035 +1066200 PCVVGSY +1066218

CPEL_1564 vs: CAQ16704_0538 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2913bp / 971aa PV: No
Function: hemagglutination domain protein

Score: 1775.00 bits: 769.49 e-value: 0.000000
length: 1043 gaps: 114 id: 507 positives: 617 coverage: 0.52 query coverage 0.50

CPEL_1564 +19 SKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGILNASG +118
+ KLT HI+LS I SLLFSP ALPSGGKFTHGT+GTIN+ GN M I G KV SVIQWGGGF IN+GESVNFGG KNYLNIAHGT KSTIAG+LNA G
CA..4_0538 +508742 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSNKNYLNIAHGTSKSTIAGLLNANG +509039

CPEL_1564 +119 NNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKVLIQGYLNTKDKTFNQIKA +218
NNVFLINPNGVIITKTG INANRFVASTSSM M FANM F G SFSPVFKP K GNV+NMGNINA+ VLLIGNKV IQG
CA..4_0538 +509042 NNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKP-SKAGNVVNMGNINADKVLLIGNKVDIQG-------------- +509339

CPEL_1564 +219 IDEGKKAN--IHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIV-KNY---NGINH-NNTNFSNMKYVG-----IGSDVDWW +318
GK N HLVGN +Y D + + +TA G + + + F + I NY NG H NF +G +W
CA..4_0538 +509342 ---GKLGNSTTHLVGNNVYIDADSANLNSTINVTAIQGGYIQRQMNKFANDGYNFGNNTNIQNTNYTETNGQTHIGSNNFKKALTIGNMENEKANATEWF +509639

CPEL_1564 +319 HFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGV--CTGQNYANYWVDLNGDGIKQDNEFTSMII--NGNY----FTKTFDGQGYTLKNINIDTTKLK +418
+FAKGWNE R + +E+RL+ ++DF N GV QNYANY + T MI+ N N+ F KTFDGQGYTLKNINIDTT L
CA..4_0538 +509642 YFAKGWNEDKGYTRNV-DEFRLVGNVDFSGNKGQGVEGRDWQNYANYCLSAG--------NCTNMIVGHNENFYYGGFNKTFDGQGYTLKNINIDTTSLS +509939

CPEL_1564 +419 YNPSHVGIFGAIT-STIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALL-NISLSN---MgyfsftggsfiggfagsLQDGIHSNISLNNIGDISVNNV +518
P +VGIFG + +T KN+NVDYMGGGIK G++GGFVG + +G+ NISL N + + G +GGF G + SNISLNNIGDIS
CA..4_0538 +509942 NKPRYVGIFGGVLGATFKNINVDYMGGGIKTNNYGHVGGFVGYAISGSTFSNISLNNIGDISSSGGSNGGNVGGFTGYAESATFSNISLNNIGDIS--SS +510239

CPEL_1564 +519 TFMGGFAGYLQDGIYSNISLNNIGDISVNNVDST--GGFAGYAGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLKNIGNIFNEA +618
+F+GGF GY+ + +NISLNNIGDIS N V + GGF GYA NISL IGNI G S+ G F FSNI L NIGNI
CA..4_0538 +510242 SFVGGFIGYVYESTLTNISLNNIGDISSNSVGGSYAGGFTGYAVAATFSNISLNNIGNISSSNSVG---GSYAGGFTGHAESATFSNISLNNIGNISSVN +510539

CPEL_1564 +619 KKNDFLHATAGGFIGYLMEGDTkfenififfnpnikiineTG-----LSGKFFGALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYAD +718
F AGGF GY+ T + + + +GKFFG T T +NIHIYHH DLANAT D+NYWGS+NDKIQIHTY +
CA..4_0538 +510542 DSGSF----AGGFAGYIYTFGTSSLTFKNIYIFFNPNMSISASGNYIYAGKFFGK--GDFTGTLDNIHIYHHTNDLANATYDQNYWGSSNDKIQIHTYNN +510839

CPEL_1564 +719 KTQESVYKDFLSKANTIEK------PTIPNKPSDNDVILASDDLYKDIVDKIITDLYNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFL +818
QES Y+DFLSK NTI + P+ P P++ DVIL SDD+ I + N+ + + Y +++ D L
CA..4_0538 +510842 SNQESFYQDFLSKVNTISRPTPPTNPSTPSNPTNPDVILGSDDV-------ISANDLNTWLREILAGNYWIDIND------------------------L +511139

CPEL_1564 +819 SGDKTKALEVVQSLDFLLA-YEKNGLSTASKDKFDAEalnlkntllantnkVIKNKNDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVK +918
S K + E+ QS+ FL A Y + G+ K+ + N T N + NK +L F+ + LK L+ SN+A LK +QEQLK AI KYNDYVK
CA..4_0538 +511142 SSIKGISEELKQSISFLEALYGQEGM----KEILEG-FGNDYKTNYRNYQRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVK +511439

CPEL_1564 +919 KINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQ +1018
K+NENPS+KN+ATL SLKAEVDRL NLS EL +I NNQ+ L+TWQ + S+ SN +F IIG+F N+AL PNL+++ G EN+DY+K+SRQ+A +QKQ
CA..4_0538 +511442 KVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKIIGEFKNLALLTPNLDEV-IVNGNENEDYKKVSRQVANAQKQ +511739

CPEL_1564 +1019 TPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCVVESY +1061
TPTF+YEE E +E++E AL Q+ + CIVSDNFKTMNPCV S+
CA..4_0538 +511742 TPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +511868

CPEL_1564 vs: CAQ16704_1535 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3009bp / 1003aa PV: No
Function: hemagglutination domain protein

Score: 2133.00 bits: 923.92 e-value: 0.000000
length: 1087 gaps: 170 id: 567 positives: 667 coverage: 0.57 query coverage 0.55

CPEL_1564 +19 SKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGILNASG +118
+ KLT HI+LS I SLLFSP ALPSGGKFTHGT+GTIN+ GN M I G KV SVIQWGGGF IN+GESVNFGG KNYLNIAHGT KSTIAG+LNA G
CA..4_1535 +1511353 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSNKNYLNIAHGTSKSTIAGLLNANG +1511650

CPEL_1564 +119 NNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKVLIQGYLNTKDKTFNQIKA +218
NNVFLINPNGVIITKTG INANRFVASTSSM N M FANM F G SFSPVFKPN K GNV+NMGNINAN VLLIGNKVL+Q NTK+KTFNQIKA
CA..4_1535 +1511653 NNVFLINPNGVIITKTGTINANRFVASTSSMDNTTMQNFANMNNFNDGLSFSPVFKPN-KLGNVVNMGNINANKVLLIGNKVLLQSSFNTKNKTFNQIKA +1511950

CPEL_1564 +219 IDEGKKANIHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDF-DFIVKNYNGINHNNTNFSNMKYVGIGSDVDWWHFAKGWNEYNN +318
+NIHLVGNEI+ADIAT KDI KLYITAKDKGSLYLNATGYYYNPSSF F ++ K YNGINHNNTNFSNM+YVGIGSDVDWWHFAKGWNE
CA..4_1535 +1511953 ------SNIHLVGNEIHADIATLKDINKLYITAKDKGSLYLNATGYYYNPSSFSHFNNYESKAYNGINHNNTNFSNMRYVGIGSDVDWWHFAKGWNENKA +1512250

CPEL_1564 +319 DFRTIANEYRLINDIDFQANCKNGV--CTGQNYANYWVDLNGDGIKQDNEFTSMIIN-GNYFTKTFDGQGYTLKNINIDTTKLKYNPSHVGIFGAI-TST +418
FRT A EY+L NDIDF+ N GV QNYANY + TSMI+ N F KTFDGQGYTLKNINID T L P +VGIFG+I +T
CA..4_1535 +1512253 GFRTSASEYKLTNDIDFKGNKGQGVEGRDWQNYANYCL--------STYNCTSMIVGFSNAFNKTFDGQGYTLKNINIDITSLSNKPEYVGIFGSIYGAT +1512550

CPEL_1564 +419 IKNVNVDYMGGGIKAKSVG---YLGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQDGIHSNISLNNIGDISVN----NVTFMGGFAGYLQ-- +518
KN+NVDYMGGGIKA VG +GGFVG +Y G HSNISLNNIG+IS ++GGFAGY++
CA..4_1535 +1512553 FKNINVDYMGGGIKANDVGDYFRVGGFVGWAYGGT-------------------------------HSNISLNNIGNISTSGGGYGRIYVGGFAGYVERE +1512850

CPEL_1564 +519 ---------------------------------DGIYSNISLNNIGDI-----------------------SVNN---VDSTGGF-----AGYAGIV--K +618
G +SNISLNNIG+I S+NN + ++GG+ G+AG+V
CA..4_1535 +1512853 TFSNISLNNIGDISSSGISSSSASAGGFAGGAIRGTFSNISLNNIGNISSSGSSASAGGFAGSAGGTYSNISLNNIGNISASGGYNDSQAGGFAGVVLGT +1513150

CPEL_1564 +619 ICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGDTkfenif--iffnpnikiineTGLSG +718
NISL IGNI Y S+ G F FSNI L NIGNI + N+F+ +A GF G + T N G
CA..4_1535 +1513153 FSNISLNNIGNISSSGGSRYTR-SQAGGFAGNAGYGTFSNISLNNIGNI-SASVDNNFV--SAAGFAGIITVNSTFKNIYIFFNPNMSISASGNWQNYIG +1513450

CPEL_1564 +719 KFFGALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTIPNKPSDNDVILASDDLYKDIVDKIITDL +818
KFFG +N TF+N+HIYHH DLANAT D+NYWGS+NDKIQIHTY + QE VY+DFLSKANTI +PT P PS+ DVIL SDD+ I +
CA..4_1535 +1513453 KFFGYINGSPNLTFDNVHIYHHTNDLANATYDQNYWGSSNDKIQIHTYNNSNQENVYQDFLSKANTISRPTPPTNPSNPDVILGSDDV-------ISAND +1513750

CPEL_1564 +819 YNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLA-YEKNGLSTASKDKFDAEalnlkntllantnkVIKNK +918
N+ + + Y +++ D LS K + E+ QS+ FL A Y + G+ K+ + N N + NK
CA..4_1535 +1513753 LNTWLGEILAGNYWIDIND------------------------LSSIKGISEELKQSISFLEALYGQEGM----KEILEG-FSNDYKINYRNYQRFATNK +1514050

CPEL_1564 +919 NDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQ +1018
+L F+ + LK L+ SN+A LK +QEQLK AI KYNDYVKK+NENPS+KN+ATL SLKAEVDRL NLS EL +I +NQ L+TWQ + S SN +
CA..4_1535 +1514053 ANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNH +1514350

CPEL_1564 +1019 FNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCVVESY +1105
F I G+F N+AL PNL+++ G EN+DY+K+SRQ+A +QKQTPTF+YEE E +E++E AL Q+ + CIVSDNFKTMNPCV S+
CA..4_1535 +1514353 FKIKGEFKNLALLTPNLDEV-IVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +1514611

CPEL_1564 vs: CAQ16704_0923 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2625bp / 875aa PV: Yes
Function: hemagglutination domain protein

Score: 1004.00 bits: 436.91 e-value: 0.000000
length: 563 gaps: 104 id: 286 positives: 333 coverage: 0.60 query coverage 0.51

CPEL_1564 +1 MAVFSPRGG---GSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSK +100
M S RGG GSNN DLT S KKL+ +ILLS IVASLLFS FALPSGGKFTHGT+GTIN+ GN M I G KV SVIQWGGGF IN+GESVNF G K
CA..4_0923 +894680 MLKLSSRGGVCWGSNNLDLTSSYKKLSKQILLSNIVASLLFSSTFALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFNGSNK +894977

CPEL_1564 +101 NYLNIAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLI +200
NYLNIAHGT KSTIAG+LNA GNNVFLINPNGVIITKTG INANRFVASTSS+ N D F N+ T+E +FSPVFKPN K GNV+NMGNI AN+VLLI
CA..4_0923 +894980 NYLNIAHGTSKSTIAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNNADYTTFKNL-TYENAHTFSPVFKPN-KLGNVVNMGNIKANNVLLI +895277

CPEL_1564 +201 GNKVLIQGYLNTKDKTFNQIKAIDEGKKAN----IHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGINHNNTNFS +300
GNKV IQG GK N HLVGN +Y D + + +TA G + + + F + N N +N+ T+ +
CA..4_0923 +895280 GNKVDIQG-----------------GKLGNANSTTHLVGNNVYIDADSANLNSTINVTAIQNGYIQRQMNKFANDNYNFTN----NVNINKVNY--TDSA +895577

CPEL_1564 +301 NMKYVGIGSD-----------------VDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMIIN-GN +400
N + GI S+ +W +FAKGWNE + +E+RL+ ++DF N GQNYANY +D G G TSMI+ N
CA..4_0923 +895580 NTTHNGISSNFKKVLTIGNMENEKANATEWFYFAKGWNE-SIGYTQSVDEFRLVGNVDFSGN------QGQNYANYCID--GLGC------TSMIVGFSN +895877

CPEL_1564 +401 YFTKTFDGQGYTLKNINIDTTKLKYNPSHVGIFGAI-TSTIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQ +500
F KTFDGQGYTLKNINIDT+ L P VGIFG+ +T KN+NVDYMGGGIK +GGF G YA
CA..4_0923 +895880 TFDKTFDGQGYTLKNINIDTSSLNNKPYFVGIFGSTNNATFKNINVDYMGGGIKTTDGARVGGFAG--YA------------------------------ +896177

CPEL_1564 +501 DGIHSNISLNNIGDISVNNV--TFMGGFAGYLQDGIYSNISLNNIGDISVNNV--DSTGGFAG +563
G SNISLNNIG+IS ++ GGFAG+ GI+SNISLNNIG+IS N GGFAG
CA..4_0923 +896180 SGTFSNISLNNIGNISNSGKYDSYTGGFAGFAY-GIFSNISLNNIGNISSSNSYDARAGGFAG +896366

Score: 696.00 bits: 304.05 e-value: 0.000000
length: 551 gaps: 65 id: 237 positives: 308 coverage: 0.60 query coverage 0.51

CPEL_1564 +484 NIGDISVNNVTFMGGFAGYLQDGIYSNISLNNIGD-ISVNNVDSTGGFAGYAGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLK +583
NI S+NN + G G + + NI ++ +G I + GGFAGYA NISL IGNI N + +S+ G F + FSNI L
CA..4_0923 +895808 NIDTSSLNNKPYFVGIFGSTNNATFKNINVDYMGGGIKTTDGARVGGFAGYAS-GTFSNISLNNIGNIS----NSGKYDSYTGGFAGFAYGI-FSNISLN +896105

CPEL_1564 +584 NIGNIFNEAKKNDFLHATAGGFIGYLMEGDTkfenififfnpnikiineTGLSGKFFGALNDKATYTFNNIHIYHHEKDLANATADKNYW------GSTN +683
NIGNI + N + A AGGF G + + F I G GKFFG A TF+N+HIYHH DL NA D YW G
CA..4_0923 +896108 NIGNI---SSSNSY-DARAGGFAGSINSFLSITFKNIYIFFNPNMSISIDG--GKFFGDKYGSANPTFDNVHIYHHVSDLTNANNDNSYWNDFNTNGYVS +896405

CPEL_1564 +684 DKIQIHTYADKTQESVYKDFLSKANTIEKPTIPNKPSDN---DVILASDDLYK-DIVDKIITDLYNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKV +783
+KI IHTY + QESVY+DFLSKANTI +PT P PS+ DVIL SDD+ + +D + ++ N Y +++ D+ K +SE
CA..4_0923 +896408 NKINIHTYNNSNQESVYQDFLSKANTISRPTPPTNPSNPTNPDVILGSDDVISANDLDTWLGEILAGN--------YWIDINDLNSIKG----ISE---- +896705

CPEL_1564 +784 EFVAKYFLSGDKTKALEVVQSLDFLLA-YEKNGLSTASKDKFDAEalnlkntllantnkVIKNKNDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAI +883
E+ QS+ FL A Y + G+ K+ + N T N + NK +L F+ + LK L+ SN+A LK +QEQLK AI
CA..4_0923 +896708 ----------------ELKQSISFLEALYGQEGM----KEILEG-FGNDYKTNYRNYQRFATNKANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAI +897005

CPEL_1564 +884 TKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSR +983
KYNDYVKK+NENPS+KN+ATL SLKAEVDRL NLS EL +I NNQ+ L+TWQ + S+ SN +F IIG+F N+AL PNL+++ G EN+DY+K+SR
CA..4_0923 +897008 AKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKIIGEFKNLALLTPNLDEV-IVNGNENEDYKKVSR +897305

CPEL_1564 +984 QIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCVVESY +1034
Q+A +QKQTPTF+YEE E +E++E AL CIVSDNFKTMNPCVV S+
CA..4_0923 +897308 QVANAQKQTPTFEYEENEKEEVEETALM---LICIVSDNFKTMNPCVVRSF +897458

CPEL_1564 vs: CAQ16704_0012 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2751bp / 917aa PV: Yes
Function: hemagglutination domain protein

Score: 2024.00 bits: 876.90 e-value: 0.000000
length: 1026 gaps: 146 id: 548 positives: 640 coverage: 0.60 query coverage 0.54

CPEL_1564 +20 KKLTNHILLSSIVASLLFSPAFA-----LPSGGKFTHGTSGTINVSGNNMHIHGNKVN--SVIQWGGGFNINKGESVNFG--GNSKNYLNIAHGTNKSTI +119
KKLTNHI LS I SLLFSP A LPSGGKFTHGT+G+IN+ GN M I G N VIQWGGGFNI K V FG N NYLNIAHGT KSTI
CA..4_0012 +11530 KKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFTHGTTGSININGNTMNINGTTPNKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTI +11827

CPEL_1564 +120 AGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKVLIQGYLNTKD +219
AG+LNA GNNVFLINPNGVIITKTG INANRFVASTSSM M FANM F G SFSPVFKPN K GNV+NMGNI A+++ L GNKV++
CA..4_0012 +11830 AGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPN-KLGNVVNMGNIKADNITLQGNKVVL------GS +12127

CPEL_1564 +220 KTFNQIKAIDEGKKANIHLVGNEIYADIATF--KDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGINHNNTNFSNMKYVGIGSDVDWWHF +319
+ +N I + NI L GNE+Y D+A+ + L + AK KG YLNA GYYYNP SF F I N NF YVGIGSDVDWWHF
CA..4_0012 +12130 ENYNNINKV---MAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKGNAYLNANGYYYNPYSFSVFSKI--------SGNNNFKKDAYVGIGSDVDWWHF +12427

CPEL_1564 +320 AKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMIIN---GNYFTKTFDGQGYTLKNINIDTTKLKYNPSHVG +419
AKGWNE FRT A EYRL DIDF N +NYANY +D G TSMI+ N FTKTFDGQGYTLKNINIDT+ L +VG
CA..4_0012 +12430 AKGWNENKAGFRTSASEYRLTKDIDFGGN------NNKNYANYCIDGLG--------CTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVG +12727

CPEL_1564 +420 IFGAIT-STIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQDGIHSNISLNNIGDISVNNVTFMGGFAGYLQ +519
IFG I +TIKN+NVDYMGGGI+ + Y GGF G S +G NISL N+ NIS N GD S F+ GFAG+
CA..4_0012 +12730 IFGYINDATIKNINVDYMGGGIRTNT--YAGGFAG-SASGTFSNISLNNI-----------------------GNISGNSNGDQS-----FVAGFAGF-A +13027

CPEL_1564 +520 DGIYSNISLNNIGDISVNNVDSTGGFAGY-AGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSK-VDFSNIYLKNIGNIFNEAKKNDFLHATAG +619
G +SNISLNNIGDIS GGFAG+ AGI NISL IGNI G + G F F NIY+ FN K + A
CA..4_0012 +13030 GGTFSNISLNNIGDISGYHA---GGFAGWLAGI--FTNISLHDIGNI-----SGNKSHGIAGGFAGSYENDSTFKNIYI-----FFNPNAK---ISGRAP +13327

CPEL_1564 +620 GFIGYLMEGDTkfenififfnpnikiineTGLSGKFFGALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANT +719
G KFFG T NNIHIYH DL NA D+NYWG TNDKIQIHTY + Q+S Y+DFLSKANT
CA..4_0012 +13330 G---------------------------------KFFGQ--PFWTAHLNNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKANT +13627

CPEL_1564 +720 IEKPTIPNKP------SDNDVILASDDLYKDIVDKIITDLYNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDF +819
I +PT P P +D +V L +DL+++IV++II D+ N Y + + NLL+MLK+K NY+NM E QK F+AKYFL G+ TKALEVVQSLDF
CA..4_0012 +13630 ISRPTPPSNPTTPPNLTDTNVKLDENDLHQNIVNEIINDITNNH-----YEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDF +13927

CPEL_1564 +820 LLAYEKNGLSTASKDKFDAEalnlkntllantnkVIKNKNDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASL +919
LLAYE NGLSTAS DKF+A L +KNTL+ NT KVIKNKNDL +FL DLKNL+++ NQ + LK +QEQLK AI KYNDYVKK+NENPS+KN+ATL SL
CA..4_0012 +13930 LLAYENNGLSTASNDKFEANGLSVKNTLVTNTKKVIKNKNDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSL +14227

CPEL_1564 +920 KAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYeeeetqeideA +1019
KAEVDRL NLS EL +I +NQ L+TWQ + S SN +F I G+F N+AL PNL+++ G EN+DY+K+SRQ+A +QKQTPTF+YEE E +E++E
CA..4_0012 +14230 KAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKGEFKNLALLTPNLDEV-IVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEET +14527

CPEL_1564 +1020 ALTQRARTCIVSDNFKTMNPCVVESY +1045
AL Q+ + CIVSDNFKTMNPC+V S+
CA..4_0012 +14530 ALMQKGKICIVSDNFKTMNPCIVRSF +14605

CPEL_1564 vs: CAQ16704_1287 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3186bp / 1062aa PV: Yes
Function: hemagglutination domain protein

Score: 2052.00 bits: 888.98 e-value: 0.000000
length: 1101 gaps: 125 id: 573 positives: 678 coverage: 0.54 query coverage 0.56

CPEL_1564 +1 MAVFSPRGG---GSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSK +100
M S RGG GSNN DLT S KKL+ +ILLS IVASLLFS FALPSGGKFTHGT+GTIN+ GN M I G KV SVIQWGGGF IN+GESVNF G K
CA..4_1287 +1266138 MLKLSSRGGVCWGSNNLDLTSSYKKLSKQILLSNIVASLLFSSTFALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFNGSNK +1266435

CPEL_1564 +101 NYLNIAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLI +200
NYLNIAHGT KSTIAG+LNA GNNVFLINPNGVIITKTG INANRFVASTSS+ N D F N+ T+E +FSPVFKPN K GNV+NMGNI A+ VLLI
CA..4_1287 +1265838 NYLNIAHGTSKSTIAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNNADYTTFKNL-TYENAHTFSPVFKPN-KLGNVVNMGNIKADKVLLI +1266135

CPEL_1564 +201 GNKVLIQGYLNTKDKTFNQIKAIDEGKKAN----IHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIV-KNY---NGINHNN +300
GNKV IQG GK N HLVGN +Y D + + +TA G + + + F ++ I NY NG HN
CA..4_1287 +1265538 GNKVDIQG-----------------GKLGNANSTTHLVGNNVYIDADSANLNSTINVTATQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNG +1265835

CPEL_1564 +301 TN-FSNMKYVG-----IGSDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGV--CTGQNYANYWVDLNGDGIKQDNEFTSMIINGNYFTKTF +400
+N F + +G +W +FAKGWNEY D +++ +E+RL+ ++DF N GV QNYANY LNG G TSMI+ F KTF
CA..4_1287 +1265238 SNNFKKVLTIGNMENEKANATEWFYFAKGWNEYIGDTQSV-DEFRLVGNVDFSGNKGQGVEGRDWQNYANYC--LNGLGC------TSMIVTS--FAKTF +1265535

CPEL_1564 +401 DGQGYTLKNINIDTTKLKYNPSHVGIFGAIT-STIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMgyfsftggsfiggfagsLQ----DG +500
DGQGYTLKNINIDT+ L P VGIFG+ +TIKN+NVDYMGGGIKA +GGFVG + G NISL N+G S + S + G D
CA..4_1287 +1264938 DGQGYTLKNINIDTSSLSNKPYFVGIFGSTNNATIKNINVDYMGGGIKATDGARVGGFVGFASNGTFSNISLNNIGDISSSSSSVGFSYIGGFAGNAGDV +1265235

CPEL_1564 +501 IHSNISLNNIGDIS---------------------VNNVTFM------------------GGFAGYLQDGIYSNISLNNIGDISVNNVDS----TGGFAG +600
SNISLNNI IS N++ GGFAGY +G +SNISLNNIG+IS D GGFAG
CA..4_1287 +1264638 SFSNISLNNISSISGSGYRDIRAGGFVGGYAYRGTFSNISLNNIGNISSSISSTTSVSYTGGFAGYASNGTFSNISLNNIGNISGSSDDYSDSYAGGFAG +1264935

CPEL_1564 +601 YAGIVKICNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGDTkfenififfnpnikiineT +700
+A NISL IGNI G S+ G F FSNI L NIGNI + AGGFIGY+ DT F
CA..4_1287 +1264338 FAS-GTFSNISLNNIGNISG---SGLTSVSYAGGFAGYAIDGTFSNISLNNIGNISSSNSNYGGSESYAGGFIGYIYNDDTSSIITFENIYIFFNPNMSI +1264635

CPEL_1564 +701 GLSG-------KFFG-ALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTIPNKP------SDNDVI +800
SG KFFG A TF N+HIYHH DL NA D+NYWG TNDKIQIHTY + Q+S Y+DFLSKANTI +PT P P +D +V
CA..4_1287 +1264038 SASGGRQNYIGKFFGRGYFTGANPTFTNVHIYHHTNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKANTISRPTPPSNPTTPPNLTDTNVK +1264335

CPEL_1564 +801 LASDDLYKDIVDKIITDLYNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASKDKFDAEal +900
L +DL+++IV++II D+ N Y + + NLL+MLK+K NY+NM E QK F+AKYFL G+ TKALEVVQSLDFLLAYE NGLSTAS DKF+A L
CA..4_1287 +1263738 LDENDLHQNIVNEIINDITNNH-----YEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGL +1264035

CPEL_1564 +901 nlkntllantnkVIKNKNDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQ +1000
+KNTL+ NT KVIKNKNDL +FL DLKNL+++ NQ + LK +QEQLK AI KYNDYVKK+NENPS+KN+ATL SLKAEVDRL NLS EL +I NNQ
CA..4_1287 +1263438 SVKNTLVTNTKKVIKNKNDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLDNLSKELFASINNNQ +1263735

CPEL_1564 +1001 IKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYeeeetqeideAALTQRARTCIVSDNFKTMNPCV +1100
L+TWQ + S SN +F I G+F N+AL PNL+++ G EN+DY+K+SRQ+A +QKQTPTF+YEE E +E++E AL Q CIVSDNFKTMNPCV
CA..4_1287 +1263138 ELLQTWQSKTSTDSNNHFKIKGEFKNLALLTPNLDEV-IVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQ---ICIVSDNFKTMNPCV +1263435

CPEL_1564 +1101 V +1101
V
CA..4_1287 +1262838 V +1262838