Analysis of poly-G tracts in 525.92


Strain name: 525.92
Filepath: ../polyG/campy.new\38568-153792987.gb
Species: C. curvus

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


TractNoContigLocationTractOn lengthGene GroupOffset from geneGeneLengthFunctionNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0CP00076765037G10102160CCV52592_1110716TonB-dependent heme/hemoglobin receptor family proteinCCV52592_1110
1CP000767217312G7None217-199199bp upstream of CCV52592_0842100hypothetical proteinCCV52592_0842
2CP000767253132G11112180CCV52592_0871101No annotation data
3CP000767402428G7None219-5656bp upstream of CCV52592_1239646TonB-dependent receptorCCC13826_0435CCON33237_1482CCV52592_1239CGRAC_0782
4CP000767576157G7None1251010bp downstream of CCV52592_0522467argininosuccinate lyaseCj0931cCJJ81176_0938A911_04500PJ16_04865PJ17_04495N135_00968N564_00898N565_00941N755_00938PJ18_04570PJ19_05130JJD26997_0883BN867_09170M635_00115UC78_0885C8J_0868CJ8421_04605RC25_04300CJM1cam_0895CJH_04645CJSA_0876ICDCCJ07001_883CJM1_0895MTVDSCj20_0927ERS445056_00903A0W68_04860H730_05530CJE1009CjjRM1285_0888AXW77_04510CjjRM3196_0940CjjRM3197_0940CJS3_0973A0W69_05530QZ67_00997N149_0904AB430_06120G157_04135VC76_04690AR446_03470ATE51_01688YSQ_04570YSS_04920YSU_04220A6K30_04130CCC13826_1520CCON33237_0504CCV52592_0522CFT03427_1269CFF04554_1321CFF8240_1295CSG_14430CFV97608_1445CFTSP3_1332CFVI03293_1345CR44_06415CGRAC_0095CHAB381_1484CHL_1345CHH_1311CIG1485E_1319CIG2463D_1452CIG11343_1267CUREO_0349
5CP000767801938G14None220-3535bp upstream of CCV52592_1369170putative outer membrane proteinCCV52592_1369
CCV52592_1443
6CP000767835868G8None2213434bp downstream of CCV52592_1407130competence protein ComEA helix-hairpin-helix repeat protein
7CP000767897341C9None2228080bp downstream of CCV52592_130973hypothetical proteinCCV52592_1309CIG2463D_1373
8CP0007671341624G8None223-209209bp upstream of CCV52592_218530No annotation dataAL111168:[878690:878766](-)
AL111168:[878399:878475](-)
CJJ81176_1737
CJJ81176_1740
A911_t08374PJ16_04930
PJ16_04945
PJ17_04560
PJ17_04575
N135_00980N564_00910
N564_02105
N565_00957
N565_00953
N755_02240
N755_02225
PJ18_04650
PJ18_04635
PJ19_05210
PJ19_05195
JJD26997_1159
JJD26997_1162
M635_00180
M635_00195
UC78_0899
UC78_0902
C8J_t0025
C8J_t0022
CJ8421_t08749
CJ8421_t08755
RC25_04395
RC25_04410
CJM1cam_0915
CJM1cam_0918
CJH_04725
CJH_04710
CJSA_t0022
CJSA_t0025
ICDCCJ07001_902
ICDCCJ07001_905
CJM1_0915
CJM1_0918
MTVDSCj20_0948
MTVDSCj20_0945
ERS445056_00920
ERS445056_00923
A0W68_04940
A0W68_04925
H730_t10040
H730_t10034
CJE_tRNA-Lys-2
CJE_tRNA-Lys-1
CjjRM1285_0963
CjjRM1285_0966
AXW77_04575
AXW77_04590
CjjRM3196_0965
CjjRM3196_0962
CjjRM3197_0962
CjjRM3197_0965
CJS3_1841
CJS3_1838
A0W69_05595
A0W69_05610
QZ67_02044
QZ67_02029
N149_0831
N149_0834
AB430_05775
AB430_05760
G157_t08550
G157_t08556
VC76_04335
VC76_04350
AR446_03820
AR446_03835
ATE51_01824
ATE51_01830
YSQ_04930
YSQ_04915
YSS_04515YSU_04565
YSU_04580
A6K30_04495
A6K30_04480
CCC13826_2216
CCC13826_2220
CCC13826_2262
CCON33237_0196
CCON33237_1334
CCV52592_2185
CCV52592_2177
CCV52592_2181
CFF04554_0590CFF8240_0597CFV97608_0643CFVI03293_0593CGRAC_1747CHAB381_1588CHL_0568
CHL_0572
CHL_0575
CHH_0534
CHH_0537
CHH_0530
CIG1485E_0691
CIG1485E_0694
CIG2463D_0695
CIG2463D_0692
CIG11343_0649
CIG11343_0652
CINS_0574
CINS_0577
UPTC4110_0513
UPTC4110_0516
UPTC4110_0519
CONCH_0516
CONCH_0519
UPTC3659_0538
UPTC3659_0541
UPTC3659_0544
Cla_0512
Cla_0509
Cla_0515
UPTC16701_0511
UPTC16701_0508
UPTC16712_0519
UPTC16712_0516
CD56_02555
CD56_02540
CD56_02570
CPEL_0614
CPEL_0617
CPEL_0611
CAQ16704_0535
CAQ16704_0532
CAQ16704_0529
CSUB8521_0548
CSUB8521_0551
CSUB8521_0545
CSUB8523_0537
CSUB8523_0534
CSUB8523_0531
CUREO_1340CVOL_0597
CVOL_0594
9CP0007671466902G992240CCV52592_2212862TonB-dependent receptorCCV52592_2212
CCV52592_0932
CGRAC_2093
10CP0007671476607G992240CCV52592_0932859TonB-dependent receptorCCV52592_0932
CCV52592_2212
11CP0007671783054G13None225-9393bp upstream of CCV52592_0623365nicotinate phosphoribosyltransferase, subgroup BCCC13826_2100CCON33237_1657CCV52592_0623