Gene group 476

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
476UPTC16712_0018autotransporter domain protein667
UP..2_0018
UP..2_0688
UP..2_0746
CD56_07755
CD56_05090
CS..1_0722
CS..3_0810

Annotated functions

Function#Occuringscore
autotransporter domain protein51.43
hypothetical protein10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
UP..2_0018
UP..2_0688
UP..2_0746
CD56_07755
1
CS..1_0722
CS..3_0810

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
UP..2_0018
UP..2_0688
UP..2_0746
CD56_07755
1
CS..1_0722
CS..3_0810

RM16712

RM16712 : UPTC16712_0018 [tract entry] [top]

Function: autotransporter domain protein
+0 MSYYSTGGGFENSQSNNTSLKSSHLNNNLSFTKKTFLSLATISFLATCANASVVTIGDQASNGSIEITKAKDSKILKEKQVKNSRSISGGGCGDTTCTIE
+100 GSQDGPVTIGNGGGTLTITEDGSINGNNSNAINVSQGATNVTINNAGNVNGGGSSGAAINIGDNRSGGATINNFTNSGTIGDGSNKFAITVWGKSDSKST
+200 IETFNNSGLIQSGSGEAIYLGNTTINDFTNSGTIKSTGGVGVNVASGTNISTLNNKGTISGSRGVSIASNSTIENLNNSNTGFISSIKIAKNGKINNINN
+300 QGTIGGVDLGDVNRDPQKAFIGTFNNNGTIINNKGYGTVFIVTSTIENFTNSGLIENSSGGDSGGIYTAGGKIGTFINENTGIIKSTKEGIKISYIDWTG
+400 TQADLIQNKGTIIAGNSGVHISNLSSLKTFENSGFIQATNGVEIKNYGQGKAGVIETLNNSGSIFGSANGIMLHGGASGSSINTITNKGTILGQSGAGIY
+500 VNGANQHIKDYIKLEGSNALIAGGTAGIINKGTIGVNNNTGSLVNNNTGNVIDLKNGATIAALSPNKDGSFNFNTQGNAILNEGTIKGNINLDDGSKIIG
+600 AINNKNIISGSISLNKKSYISSIINEKTIEKSIDLKDNSQIDKILNSGTIQDSINLKQSTIVNIDNSGTIEKGINLEKSTIGSIENSGIIGNGGIKLNDS
+700 TIGSITNNEGAKADLDLKNNSVVGTITNNGDMLITRDETSSIGKFANKGSLKNTFENKDILGTLENDKDAILEQGLFNDNGVIGTINNEGIIVGITNTFN
+800 SKTKDNKDKGYIGIISNSGTIGKEASPLDNFYGINNSGTINMLENTSLGVIFNGINNSGTINLINKGSLDTTKNNNDTKAKIYGGINNEGTMSIVNYGEI
+900 YDGITNSGTLTLSNGHVVGVNQDTKWEGGFIGKNTHGYHLENNNKGKISIDGWYFNAPEYTQSNEQRLENSIIIGGDNLGGISADKIYVDTSKLQLNTIY
+1000 DANTFFADKDGNIVGDKTNNNQGVDGNNIHSLSGIYDFMGLGNGKYIANVNLSELSGKTLAKSMVYSSRLRNINISNILRDVTSKNFQTDFSQVLDMELS
+1100 KKGEAYGNDADLLAELEDIFIPNKNVHANNYSFLIPYYSHSSIKIGKSIGQLSVNTTGLIGGSQRELPNDYGVIGFYLGYEDAFKEQATQRLKFDDKTYY
+1200 GGLTYYGILARDGINQYYISASTRLDYTKTDIEKSYKNIPTTIESDTKIYGYGVDIKLGANYYNTLDIARISPEFGLSYYGMSNKNFSLRHIDGLKEHYL
+1300 SEQFNFIDASAALKWYKPWSDKIRTNATIGAIVNLYDDAKGNLLLGQNHLSSDIKTSKYYGFGQFALSYTIANNADLSLNYAGTFTFDNTTSHTMFLKLG
+1400 LWW

[show detailed alignment]

RM16712 : UPTC16712_0688 [tract entry] [top]

Function: autotransporter domain protein
+0 MSYYSTGGGFENSQSNNTSLKSSHLNNNLSFTKKTFLSLATISFLATCANASVVTIGDQASNGSIEITKAKDSKILKEKQVKNSRSISGGGCGDTTCTIE
+100 GSQDGPVTIGNGGGTLTITEDGSINGNNSNAINVSQGATNVTINNAGNVNGGGSSGAAINIGDNRSGGATINNFTNSGTIGDGSNKFAITVWGKSDSKST
+200 IETFNNSGLIQSGSGEAIYLGNTTINDFTNSGTIKSTGGVGVNVASGTNISTLNNKGTISGSRGVSIASNSTIENLNNSNTGFISSINIAGNGTVNNINN
+300 QGTINYIRLDSNSKLGTLNNNGIISSDATGIHVNSGNVDLINNKNIIKGDANGILVQRYNNDSANVKTIENTGTILGVNEVGLLVITHNGKIDLIDNKQT
+400 GLIQGGIDAIRLFASFGKIGKIEQVNNEGSIIGGQNGINIQEFSNNKGLVNYINTITNKGTILGQSGAGIYVNGANQHIKDYIKLEGSNALIAGGTAGIY
+500 NKGTIGVNNNTGSLVNNNTGNVIDLKNGATIAALSPNKDGSFNFNTQGNAILNEGTIKGNINLDDGSKIIGAINNKNIISGNIALNDKSYITSIINEKTI
+600 EKSIDLKDNSQIDKILNSGTIQDSINLKQSTIVNIDNSGTIEKGINLEKSTIGSIENSGIIGNGGIKLNDSTIGSITNNEGAKADLDLKNNSVVGTITNN
+700 GDMLITRDETSSIGKFANKGSLKNTFENKDILGTLENDKDAILEQGLFNDNGVIGTINNEGIIVGITNTFNSKTKDNKDKGYIGIISNSGTIGKEASPLD
+800 NFYGINNSGTINMLENTSLGVIFNGINNSGTINLINKGSLDTTKNNNDTKAKIYGGINNEGTMSIVNYGEIYDGITNSGTLTLSNGHVVGVNQDTKWEGG
+900 FIGKNTHGYHLENNNKGKISIDGWYFNAPEYTQSNEQRLENSIIIGGDNLGGISADKIYVDTSKLQLNTIYDANTFFADKDGNIVGDKTNNNQGVDGNNI
+1000 HSLSGIYDFMGLGNGKYIANVNLSELSGKTLAKSMVYSSRLRNINISNILRDVTSKNFQTDFSQVLDMELSKKGEAYGNDADLLAELEDIFIPNKNVHAN
+1100 NYSFLIPYYSHSSIKIGKSIGQLSVNTTGLIGGSQRELPNDYGVIGFYLGYEDAFKEQATQRLKFDDKTYYGGLTYYGILARDGINQYYISASTRLDYTK
+1200 TDIEKSYKNIPTTIESDTKIYGYGVDIKLGANYYNTLDIARISPEFGLSYYGMSNKNFSLRHIDGLKEHYLSEQFNFIDASAALKWYKPWSDKIRTNATI
+1300 GAIVNLYDDAKGNLLLGQNHLSSDIKTSKYYGFGQFALSYTIANNADLSLNYAGTFTFDNTTSHTMFLKLGLWW

[show detailed alignment]

RM16712 : UPTC16712_0746 [tract entry] [top]

Function: autotransporter domain protein
+0 MSYYSTGGGFENSQSNNTSLKSSHLNNNLSFTKKTFLSLATISFLATCANASVVTIGDQASNGSIEITKAKDSKILKEKQVKNSRSISGGGCSSGTTCTI
+100 DGSQDGSVTIGNGGGTLTIESGGTINTSNNNNAIFVNNGASNVTIVNEGTIDGNMNGQGVHGIKTDGGSTIVDSIVNTGSILGKWNGVSVENSSIVKTIN
+200 NNGSISGNVGILVTGNKSKIETLNNQGTISGSRGVSIASNSTIENLNNSNTGFISSINIAGNGTVNNINNQGTINYIRLDSNSKLGTLNNNGIISSDATG
+300 IHVNSGNVDLINNKNIIKGDANGILVQRYNNDSANVKTIENTGTILGVNEVGLLVITHNGKIDLIDNKQTGLIQGGIDAIRLFASFGKIGKIEQVNNEGS
+400 IIGGQNGINIQEFSNNKGLVNYINTITNKGTILGQSGAGIYVNGANQHIKDYIKLEGSNALIAGGTAGIYNKGTIGVNNNTGSLVNNNTGNVIDLKNGAT
+500 IAALSPNKDGSFNFNTQGNAILNEGTIKGNINLDDGSKIIGAINNKNIISGNIALNDKSYITSIINEKTIEKSIDLKDNSQIDKILNSGTIQDSINLKQS
+600 TIVNIDNSGTIEKGINLEKSTIGSIENSGIIGNGGIKLNDSTIGSITNNEGAKADLDLKNNSVVGTITNNGDMLITRDETSSIGKFANKGSLKNTFENKD
+700 ILGTLENDKDAILEQGLFNDNGVIGTINNEGIIVGITNTFNSKTKDNKDKGYIGIISNSGTIGKEASPLDNFYGINNSGTINMLENTSLGVIFNGINNSG
+800 TINLINKGSLDTTKNNNDTKAKIYGGINNEGTMSIVNYGEIYDGITNSGTLTLSNGHVVGVNQDTKWEGGFIGKNTHGYHLENNNKGKISIDGWYFNAPE
+900 YTQSNEQRLENSIIIGGDNLGGISADKIYVDTSKLQLNTIYDANTFFADKDGNIVGDKTNNNQGVDGNNIHSLSGIYDFMGLGNGKYIANVNLSELSGKT
+1000 LAKSMVYSSRLRNINISNILRDVTSKNFQTDFSQVLDMELSKKGEAYGNDADLLAELEDIFIPNKNVHANNYSFLIPYYSHSSIKIGKSIGQLSVNTTGL
+1100 IGGSQRELPNDYGVIGFYLGYEDAFKEQATQRLKFDDKTYYGGLTYYGILARDGINQYYISASTRLDYTKTDIEKSYKNIPTTIESDTKIYGYGVDIKLG
+1200 ANYYNTLDIARISPEFGLSYYGMSNKNFSLRHIDGLKEHYLSEQFNFIDASAALKWYKPWSDKIRTNATIGAIVNLYDDAKGNLLLGQNHLSSDIKTSKY
+1300 YGFGQFALSYTIANNADLSLNYAGTFTFDNTTSHTMFLKLGLWW

[show detailed alignment]

Slaughter Beach

Slaughter Beach : CD56_07755 [tract entry] [top]

Function: hypothetical protein
+0 MSYFTGGGIENSQSNNTSLNSSHSNNNFSFTKKTFLSLATISFLATCANASIVTISDQASNGSIKITKAKDSKTLKEKQTKNSRDISGGSCSGTTCTISD
+100 SQTGQINISNGGGTLTITDKGSVSGGGQGIMVNNKVSNVTIVNQGSINGKVSGIKSQGTIDSILNSGTISGGSHYGVYVNGGSVESIENQKDGVIQGNKS
+200 GIHLDNQAKISSVVNKGTIVTTSASGVGLYEAGAGINVITWGTSIKTIDNQGLILTSNAGIGVLSSATNGDSNVETLKNSGTIEYTGSLDMINEKNEGFG
+300 QGAGIYISNMDGIPKINTIENSGLINTYNGMYFSLGSQVENINNLGTIHAIKDGIVLGNDVGSNEKRQTEIKHINNTGSIIAGRHGIFIDKSSNQEVPFY
+400 INTIENKGTILGQSGAGIFISAPKEHIKDYVKLDGSNSLIAGGTAGIHNKGTIGTNNNGASVNNGNVIDLQNGATIAALSPNKDGSFNYNLAGDAILNEG
+500 TIKGNINLDKEANIYGAINNKNTITGNISLNNNSYASSIKNEKEIQGSINLKNDSHIDSIINSGTISQGISLDKSTIGSIENSGTIGNGGIKLYNESQVS
+600 SITNNEGAKADLDLKNNSVVDLVINNGQMEITKDDTSHINAFGNNGNLQSKFKNEGEMKLLENSKDAILEQGLENTGSIEIINNAGTITSITNTFNNKTK
+700 DTKENSTIGTIINTGIIGNEATPLATQDITYGINNSGTIEKLINSSGDLSDPNAGKNIHIYGGINNSGYMDIFNTGNIHGGITNSGTLIVSNGHIHPATA
+800 NEEATWHAGFIGKNNNGYQLENNGQGKISIDGWYFKDLEYTQSNEQRLENSIIIGGDNIGGISADKIYVNTSKLQLNTIYDANTFFADKDGNIAGDKTNN
+900 GAGVDGNNIYSLSGIYDFVGLGNGKYVANVNLSELSGKTLAKSMVYSSRLRNINISNILRDLNTKNFQTEFSQTLDMQLSKAGEAYGNDADLLAELEDIF
+1000 IPNKNPNAKNHSFLLPYYNHSSIKIGRSIGQLDVDTVGMIGGSFRELPNDYGIIGFYAGYEDASKEQNTQRIKFDDKTYYGGLTYYGILARDGINQYYIS
+1100 ASTRLDYTKSDIEKSYKNIPTTIDSEAKTYGYGVDVKLGANYYNTLDIARISPEIGLSYYGMSNKNFSLRHIDGLREHYLAEQFNFIDASAALKWYKPWS
+1200 DKIRSNVTIGAIVNLYEDAKGNLKLGQNTLSSDIETSKYYGFGQLGFSYAIADNADLSLNYAGAFTFDNTTSHTMFLKLGMWW

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_0722 [tract entry] [top]

Function: autotransporter domain protein
+0 MIIRLISSLDVLQKTGSLAGGGIHKMSSQSNNLLATNDIKSLNCRKILLSLSVISFLQTCVDASIATASDKISNGSVKIVKATDVCDAKQTDCTISTTIN
+100 NSTTIENIRKNITITSDGVIKVESSNIGLPNPAIVVRNVTIENIKNEGLISSKSAGIRIQSSSIDNVTNTGTIEGDRGIYFAGGTIGSIYNSGTIIANSN
+200 ELDFSGQRLGAIVVQSKAHISDINNGGFISFNSGSGIVISQGSPIEKEEFEIETIVNSGTIKWDGTKENLSSDKIGNGIYTENMYTTTIGKIDNSGLIDV
+300 YNGMFFASDTIIETINNTGTILAKQDGIVLGDERKVEQVSKTDSNEYNINIKTINNTGTILADRYGVFIENSESKNHIETIQVSGIIIGNKAGIYNQSGS
+400 IENIILNSNAIISGNTGIINEGTLGKSNDDIKSDNNAISLNEATISASIEQKGKIIHDSNGNAIDNKGTILGNIVLSNKSKIIGVVNNEKLIQGSIKLND
+500 SFINAIDNKGTIENSIDLTKSHIDSISNTGMIKEGLKLNNSSINAIDNKGTIENSIDLTKSHIDSISNTGMIKEGLKLDNSSVDYIENFKTLSIELEQSS
+600 SVGKIVNFNDTKIEIHNNSKVGILENKQGSITIDKDETSSIDNIINSGTIENYFQNKDKMENIINDEDATVTGIHNHGVIQGGIFNNGNIDKSLVNQGNV
+700 DTISNNGSITSIVNCHSNKCNKNMDDVAYIDNIQNNELTTFDLKNISSINHIYNQERANISIIYNDSNIDNIYNIGTIGDEKTSLFDDKVYGIVNNGNIN
+800 QLKNDGVIFNGIYNNGTVKIDNTGTIYGGIVNSGTIFLDNAQDKYGEKASIGKSSQGYHLENNNNGIIKINGWYFNAPEYESEKDRLENSIAIGGDNLED
+900 IHLNKIYINTANVVQGAIYDGNTFFTDSNGDIKGHEINDGKGVNADSIEDPTGLFDFVNLGGGKYSTQLDLNELSGETLAKSIIYSARLRNINISNILRE
+1000 TNFKNFQTEFDQVSSMDLSTETEEYGNDADLLAELEDIFIFNKNPKATNYSFLIPYYSNFSITTGGNSKRLKGNTFGLVGGTQKELPNDNGVIGFYLGHE
+1100 KSSKEQAYQRLKFDDKSYYGGLTYYGVLARKGIDQYYISIDTILDYTDTILDKTYKNNSAHVGSDIKTYGYGIDIKTGANYYNTLDIARISPEIGLSYYG
+1200 ISNESFFLKHFNNAKETYNGEHFNFVDLSAVLKVHKPWSDKLKTSIVAGSIINLYNDAKGSMKLGKNKITADIETSKYYGFGQLGLSYAIAKNAELSLNY
+1300 SGVFTFSNTASHSMFFKLGLWW

[show detailed alignment]

LMG 24377

LMG 24377 : CSUB8523_0810 [tract entry] [top]

Function: autotransporter domain protein
+0 MIVRLISSLDVLQKTGSLAGGGIHKMSSQSNNLLATNDIKSLNCRKILLSLSVISFLQTCADASIVTASDKISNGSVRIVKATNVCDAKQADCTISTTIN
+100 NGISIGSKEKNITITSDGVVKVESNTDLPKPAITVSGTIGNIKNEGLISSKSAGIRIQGASSSIDNITNTGTIEGDRGIYFAGGTIGSIYNTGAIIANSN
+200 ELDFDSQRLGAIVVQRRAHISDINNGGFISFNSGSGIVINQGQVIQENFEIKTIANSGTIKWDGTKENLSSDKIGNGIYTENIHTTTIGNIDNSGLIDVY
+300 NGMFFASNTIIETINNTGTILAKQDGIVLGDERKVEQDSNEYNINIKTINNTGIILADRYGVFIENSESKNHIGTIQVSGIIIGNKAGIYNQSGSIENVI
+400 LDSNAIISGKTGIINEGTLGKSSDDTKSDNNAISLNEATISASIEHKGEMIHDSNGNAIDNKGTILGNIVLSNKSKIIGVVNNEKLIQGSIKLNDSFINA
+500 IDNKGTIENSIELTKSHIDSISNTGMIKEGLKLDNSSVDYIENFKTLSIELEQSSSVGKIINFNDAKIEIHNNSKVGILENKQGSITIDKDETSSIDNII
+600 NSGTIENYFQNKDKMENIINDEDATVTGIHNHGVIQGGIFNNGNIDKSLVNQGNVDTISNNGSITSIVNCHSNKCNKNMDDVAYIDNIQNNELTTFDLKN
+700 ISSINHIYNQERANISIIYNDSNIDNIYNIGTIGDEKTSLFDDKVYGIVNNGNINQLKNDGVIFNGIANKGTIKIDNTGVIYGGIVNSGTIFLDNAQDKY
+800 GEKASIGKSSQGYHLENNNNGIIEINGWYFNAPEYESEKDRLENSIAIGGDNLEGIHLNKIYINTANVVQGAIYDGNTFFTDSNGDIKGHEINDGKGVNA
+900 DSIEDPTGLFDFVNLGGGKYSTQLDLNELSGETLAKSIIYSARLRNINISNILRETNFKNFQTEFDQVSSMDLSTETEEYGNDADLLAELEDIFIFNKNP
+1000 KATNYSFLIPYYSNFSITTGGNSKRLKGNTFGLVGGTQKELPNDNGVIGFYLGHEKSSKEQAYQRLKFDDKSYYGGLTYYGVLARKGIDQYYISIDTILD
+1100 YTDTILDKTYKNNSAHVGSDIKTYGYGIDIKTGANYYNTLDIARISPEIGLSYYGISNESFFLKHFNNAKETYNGEHFNFVDLSAVLKVHKPWSDKLKTS
+1200 IVAGSIINLYNDAKGSMKLGKNKITADIETSKYYGFGQLGLSYAIAKNAELSLNYSGVFTFSNTASHSMFFKLGLWW

[show detailed alignment]