Gene group 70

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
70fclGDP-fucose synthetase121248Cj1428c
CJ..6_1427
PJ16_07875
N135_01519
N564_01426
N565_01466
N755_01462
PJ18_07315
PJ19_07870
JJ..7_0705
JJ..7_0706
JJ..7_1765
JJ..7_0703
JJ..7_1764
BN.._14040
M635_02865
UC78_1369
CJ.._07180
RC25_06660
CJH_07520
IC..1_1359
IC..1_1358
ER.._01543
A0.._07475
A0.._07470
H730_08160
H730_08155
CJE1612
AX.._07090
Cj..6_1427
Cj..6_1426
Cj..7_1427
Cj..7_1426
CJS3_1520
A0.._08310
A0.._08305
QZ67_01568
AB.._08790
YSQ_01725
CC..7_0118
CI..D_1604
CINS_0289
UP..9_0323
CA..4_0312
CA..4_0313
CS..1_0323
CS..1_0324
CS..1_0325

Annotated functions

Function#Occuringscore
GDP-fucose synthetase51.71
GDP-L-fucose synthetase21.43
GDP-4-keto-6-deoxy-D-sugar-3, 5-epimerase-4-reduct ase21.00
GDP-4-keto-6-deoxy-D-sugar-3, 5-epimerase-4-reductase20.86
GDP-L-fucose synthase10.57

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
JJ..7_0705
JJ..7_0706
JJ..7_1765
IC..1_1359
A0.._07475
H730_08160
Cj..6_1427
Cj..7_1427
A0.._08310
CS..1_0323
CS..1_0324
1
CA..4_0312

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
JJ..7_0705
JJ..7_0706
JJ..7_1765
IC..1_1359
A0.._07475
H730_08160
Cj..6_1427
Cj..7_1427
A0.._08310
CS..1_0323
CS..1_0324
1
CA..4_0312

269.97

269.97 : JJD26997_0705 [tract entry] [top]

Function: GDP-fucose synthetase
+0 VLKDSLIYVAGHRGTAGSAILEGLLKQGFSNIITKTHAELDLTNQKAVAEFFASQKIEFVFLAAAKLAHLGQFEPASVLYENLMIQNNILNASFKNGVKK
+100 LLFFGSAWMYPKNATNPIKEDALLSDKLDSVATPYALAKITGVKLCEAYNDEFKTGFLSLALANLYGQTKDFNFKTAKVLPAMLRKFHLAKLLSQNDEKG
+200 VLEDILLRDSLKLSTMSEAKEYLAKFGVSEESVEIWGSGKVRREFIHSEDLADAAVYIMQNINFKQIKSENSHLNVGSGEVLSIKELAFLIRDIVGFEGE
+300 VVFNTSKPDSTMDRLLDNSKINALGWKAKINLEKGVQMMYQWYHTRGGGGVTLHKQNVALSHLGKVA

[show detailed alignment]

269.97 : JJD26997_0706 [tract entry] [top]

Function: GDP-fucose synthetase
+0 MDKNAKIYLAGHRGLVGSAILRHLQKEGFSNILYKTHAELDLTNQEAVEEFFTKEKPQFVILAAAKAGGIAANSTYRADFIYENLMIEANVIHAAYKNGV
+100 KKLIFIASTTIYPKNASLPTSENEMLKGDLEYTNKPYAIAKIAGLMLCESYNLQYGTNFIALSPTNLYGSNDKFDLEKAHVMPALLRKMHLAKLLNEGHF
+200 EELLKDLNVKNLNEAKIYLAKFGVSEESVEIWGDGTPTREFIHSEDLAKAVLFILKNVDFKDLYQKDEKEIQNTHINVAPGENISIKDLANLVKEVVGFK
+300 GTLFFNTARPNGAMQKHTSGKKLENLGFKAEISLKEGVRKMYQWYHTRGGGGGKSPVLSHFKQGLGGKLCLKIA

[show detailed alignment]

269.97 : JJD26997_1765 [tract entry] [top]

Function: GDP-fucose synthetase
+0 MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVNQQAVAKFFKEEKPEYVFLAAVLPCGAANVAQRADFIYENLMIQNNVIHNSYLNNVK
+100 KLVFFGSGYMYPENAKNPLKEEYLFQGNLEYGAYSFGTAKIAGTIMCESYNLQYGTNFITLVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLNEGNIT
+200 QILQDLKMNNFEEAKEYLHNFGISKKSVEIWGTGKVRREFIHSDDLADVAIYTMQNIDFKDLIKDRKSKNTHINIGIGIDYSIKEVALMVKNIVGFSGEL
+300 IFNTSRPDSTMDRLMDCSKIHSLGWKHKIDLEKGIQMMYEWYKNNNGGGGVLNFEYFIFTNIKSLFTNNVRSFANSTKRVCNV

[show detailed alignment]

ICDCCJ07001

ICDCCJ07001 : ICDCCJ07001_1359 [tract entry] [top]

Function: GDP-4-keto-6-deoxy-D-sugar-3, 5-epimerase-4-reduct ase
+0 MQQNSKIYIAGHSGLVGSAILNELKQQGYRNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKV
+100 KKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRY
+200 EDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFKG
+300 NLVFNLNRPDGAIQKFTDCSKIHCLGWKHKIDLEKGIQMMYEWYKNNNGSGGGVLNFEYSIFTNIKSLFANNIRSFANSTKRVCNA

[show detailed alignment]

OD267

OD267 : A0W68_07475 [tract entry] [top]

Function: GDP-fucose synthetase
+0 MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAAADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKV
+100 KKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRY
+200 EDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFKG
+300 NLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIDLEKGIQMMYEWYKNNQETQNNNNSSIRWGGGGLNFEYFIFSNIQSFYTNNIYDFANSTKRVCNA

[show detailed alignment]

R14

R14 : H730_08160 [tract entry] [top]

Function: GDP-4-keto-6-deoxy-D-sugar-3, 5-epimerase-4-reduct ase
+0 MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKV
+100 KKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRY
+200 EDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFKG
+300 NLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIDLEKGIQMMYEWYKNNQETQNNNNSSIRWGGGGLNFEYFIFSNIQSFYTNNIYDFANSTKRVCNA

[show detailed alignment]

RM3196

RM3196 : CjjRM3196_1427 [tract entry] [top]

Function: GDP-4-keto-6-deoxy-D-sugar-3, 5-epimerase-4-reductase
+0 MMQQNSKIYIAGHSGLVGSAILNELKQQGYRNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHK
+100 VKKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKR
+200 YEDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFK
+300 GNLVFNLNRPDGAIQKFTDCSKIHCLGWKHKIDLEKGIQMMYEWYKNNNGSGGGVLNFEYSIFTNIKSLFANNIRSFANSTKRVCNA

[show detailed alignment]

RM3197

RM3197 : CjjRM3197_1427 [tract entry] [top]

Function: GDP-4-keto-6-deoxy-D-sugar-3, 5-epimerase-4-reductase
+0 MMQQNSKIYIAGHSGLVGSAILNELKQQGYRNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHK
+100 VKKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKR
+200 YEDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFK
+300 GNLVFNLNRPDGAIQKFTDCSKIHCLGWKHKIDLEKGIQMMYEWYKNNNGSGGGGVLNFEYSIFTNIKSLFANNIRSFANSTKRVCNA

[show detailed alignment]

WP2202

WP2202 : A0W69_08310 [tract entry] [top]

Function: GDP-fucose synthetase
+0 MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAAADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKV
+100 KKLLFIASTTVYPKNATLPTSEDQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRY
+200 EDLLNDLKFDSIEEAKNYLKKFGVDENNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKGGNTEIINTHLNIGPHKNITIKELAELIKNIVGFKG
+300 NLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIDLEKGIQMMYEWYKNNQETQNNNNSSIRWGGGGLNFEYFIFSNIQSFYTNNIYDFANSTKRVCNA

[show detailed alignment]

RM16704

RM16704 : CAQ16704_0312 [tract entry] [top]

Function: GDP-L-fucose synthase
+0 MNKDSKIYIAGHTGLVGSALLKELTKQGYYNILTRTHKELDLLNQHDVDGFFREEKPEFVFFAAAKMGGMMEQIQRRADFLYLNLMMQTNIIQSSYMHNV
+100 KKMLYLGSICVYPEKASLPIHEDSMLTGELQYINEPYALAKITGSKMCEFYNQQYGTNFISLMLTSIYGPNDNFNLETAHVFPAIFRKIYLGKLLKEKQY
+200 DSLLNELQVEQLEYAKEYLSKMGISEEFVILFGTGNPKREFIYIDDVVSAAIFSMYNINYKDIKKDKNVHINIGTGVEFSIKEVAFEIAKVMGYNGDILF
+300 DSSKPDGTMRKIIDCSKIHSLGWKHKIELNEGIKMMYDWYLNSRNKEVKTHIRGGGYRIICIYSPYSDTYKEVA

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_0323 [tract entry] [top]

Function: GDP-L-fucose synthetase
+0 MEKNSKIYIVGHRGSAGSAIMEKLQKLGYNNLIYATREELNLLDFSAVKNFFDNNQPEYVFFAAAKMSALGVKAPADILYENLTIQNNIFFNSYSSNVKK
+100 LIFFGSSWMYPQRADNPIKEESLLTSELEYNAEPYALAKIAGVRMCEFYNLQYNTNFISVALTNLYGKTADYNLKTARVLPAMLRKFHLAKLLNEKRYDE
+200 ILLDLNLQDQDEAISYLNTNGIYEEHIELWGAGKTRREFIHSDDLADVCIYIMNNINFSDLSKNNIKNTHINVGTGSDLSIAELAYLIKQITQYQGGIKF
+300 DISKPDSSMNRLLDCSKIYSLGWKHKIELKDGIKMMYEWYLNNYWGGGYSKKINYNYLPCDRMFKEVA

[show detailed alignment]

LMG 24374 : CSUB8521_0324 [tract entry] [top]

Function: GDP-L-fucose synthetase
+0 MKNTSKIYIAGHRGLVGSAIVQELRLQGYTNLIFKSHEELDLTNQHDVDEFFKKEKPEYVFLAAAKAGGIMANNTYRADFMYENLQIQCNVIHSAYKYNV
+100 KKLIFIASTVIYPKNVSLPTNEEQMLTGELEYTNMPYSIAKIAGIRMCESYNLQHKTNFISVAPINLYGSNDKFDLEKSHVLPALVKKMHLAKLLSENKH
+200 KELLEDLNCNDINEAFKYLDRYNISERSVEIWGSGLQTREFLHSDDLAQACVYIMRYIDFEDLYKKDDKEVKNTHINIGVNKNISIKELAYLVKKIVGFK
+300 GELFFDTSKLDGFKEKLTDCSKIHSLGWKHKIELEDGIKMMYDWYLKNITIEKKKKIHGGGDSKKINYNYLPCNRMFKEVA

[show detailed alignment]