Gene group 41

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
41PJ17_03155integral membrane protein6646Cj0651
CJ..6_0679
A911_03180
PJ16_03240
PJ17_03155
N135_00703
N564_00638
N565_00685
N755_00683
PJ18_03245
PJ19_03505
JJ..7_1348
BN.._06570
M635_07605
UC78_0632
C8J_0610
CJ.._03185
RC25_03130
CJ..m_0626
CJH_03295
CJSA_0618
IC..01_597
CJM1_0626
MT..0_0668
ER.._00636
A0.._03065
H730_04135
CJE0754
Cj..5_0622
AX.._03185
Cj..6_0628
Cj..7_0628
CJS3_0641
A0.._04110
QZ67_00667
N149_0621
AB.._04655
G157_05505
VC76_03270
AR.._04955
AT.._02290
YSQ_06050
YSS_02990
YSU_05700
A6.._05570
CVOL_0654

Annotated functions

Function#Occuringscore
putative integral membrane protein11.00
integral membrane protein11.00
membrane protein, putative10.86
membrane protein20.83
hypothetical protein10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
PJ17_03155
CJ.._03185
1
IC..01_597
CJE0754
AX.._03185
CJS3_0641

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
PJ17_03155
CJ.._03185
1
IC..01_597
CJE0754
AX.._03185
CJS3_0641

00-1597

00-1597 : PJ17_03155 [tract entry] [top]

Function: membrane protein
+0 MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFFCYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADW
+100 IKTNLKIGKFIPVVFVLCAYGIILFLDMILFYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI

[show detailed alignment]

CG8421

CG8421 : CJ8421_03185 [tract entry] [top]

Function: integral membrane protein
+0 MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFFCYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADW
+100 IKTNLKIGKFIPVVFVLCAYGIILFLDMILFYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI

[show detailed alignment]

ICDCCJ07001

ICDCCJ07001 : ICDCCJ07001_597 [tract entry] [top]

Function: putative integral membrane protein
+0 MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFFCYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADW
+100 IKTNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI

[show detailed alignment]

RM1221

RM1221 : CJE0754 [tract entry] [top]

Function: membrane protein, putative
+0 MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFFCYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADW
+100 IKTNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI

[show detailed alignment]

RM3194

RM3194 : AXW77_03185 [tract entry] [top]

Function: hypothetical protein
+0 MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFFCYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADW
+100 IKTNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI

[show detailed alignment]

S3

S3 : CJS3_0641 [tract entry] [top]

Function: membrane protein
+0 MRRNLSAYKAKFNGAYVFLGFFFLIYQILGSTFVYTPLLYGIFFCYMFCLLEERERTFSKLDFRWYFSLFFLFFTDITYNFFIFSSWLAFFIFYYLCADW
+100 IKTNLKIGKFIPVVFVLCAYGIILFLDMILSYIGDEKIKILGWAYIVSVFIECCLAYVFFKGKI

[show detailed alignment]