Gene group 255

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
255CFT03427_1581SAM-dependent methyltransferase8848Cj1419c
CJ..6_1418
A911_06905
PJ16_07830
N135_01508
N564_01416
N565_01456
N755_01453
PJ18_07250
PJ19_07825
JJ..7_1752
BN.._06870
M635_02770
UC78_1361
C8J_0640
CJ.._07140
RC25_06630
CJ..m_0658
CJH_07480
CJSA_1350
CJM1_0658
MT..0_0697
ER.._01535
A0.._03580
H730_08050
Cj..5_1415
AX.._06985
A0.._08255
QZ67_01554
AR.._04840
YSQ_05935
YSS_03105
YSU_05585
CF..7_1581
CF..4_1631
CF..0_1629
CSG_17630
CF..8_1756
CF..3_1646
CF..3_1653
CR44_08035
CINS_0303
CONCH_1265
UP..9_1406
Cla_0313
CD56_06725
CS..1_0344
CS..3_0327

Annotated functions

Function#Occuringscore
SAM-dependent methyltransferase31.00
methyltransferase10.67
Methyltransferase, possibly involved in O-methyl phosphoramidate capsule modification10.62
No annotation data20.00
conserved hypothetical protein10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1581
CF..3_1646
CR44_08035
1
CF..4_1631
CF..0_1629
CSG_17630
CF..8_1756
CF..3_1653

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1581
CF..3_1646
CR44_08035
1
CF..4_1631
CF..0_1629
CSG_17630
CF..8_1756
CF..3_1653

03-427

03-427 : CFT03427_1581 [tract entry] [top]

Function: methyltransferase
+0 MQKDLIEQDWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYEDMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEKRLQNVTWVRANGTNT
+100 TLMKDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSNLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFGHICSKLRKELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

04/554

04/554 : CFF04554_1631 [tract entry] [top]

Function: SAM-dependent methyltransferase
+0 MQKDLIEQNWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYGNMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEQRLPNVTWVRANGTDT
+100 TLMEDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSKLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFERICSKLRSELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

82-40

82-40 : CFF8240_1629 [tract entry] [top]

Function: conserved hypothetical protein
+0 MQKDLIEQNWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYGNMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEQRLPNVTWVRANGTDT
+100 TLMEDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSKLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFERICSKLRSELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

84-112

84-112 : CSG_17630 [tract entry] [top]

Function: Methyltransferase, possibly involved in O-methyl phosphoramidate capsule modification
+0 MQKDLIEQNWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYGNMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEQRLPNVTWVRANGTDT
+100 TLMEDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSKLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFERICSKLRSELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

97/608

97/608 : CFV97608_1756 [tract entry] [top]

Function: SAM-dependent methyltransferase
+0 MQKDLIEQNWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYGNMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEQRLPNVTWVRANGTDT
+100 TLMEDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSKLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFERICSKLRSELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

SP3

SP3 : CFTSP3_1646 [tract entry] [top]

Function: SAM-dependent methyltransferase
+0 MQKDLIEQDWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYEDMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEKRLQNVTWVRANGTNT
+100 TLMKDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSNLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFGHICSKLRKELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

cfvi03/293

cfvi03/293 : CFVI03293_1653 [tract entry] [top]

Function: No annotation data
+0 MQKDLIEQNWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGGYGNMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEQRLPNVTWVRANGTD
+100 TTLMEDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSKLFKDIFYIEQDFYFH
+200 QSIENYILAWKSVKNNFWDLETKEGSELFERICSKLRSELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]

pet-3

pet-3 : CR44_08035 [tract entry] [top]

Function: No annotation data
+0 MQKDLIEQDWDYTKHAEFYSYRPNYAKQAIDILAFYACRNGGGYEDMSVADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEKRLQNVTWVRANGTNT
+100 TLMKDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDPIQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSNLFKDIFYIEQDFYFHQ
+200 SIENYILAWKSVKNSFWDLETKEGSELFGHICSKLRKELPKEFDIRYTTRAWSVTKVR

[show detailed alignment]