Gene group 256

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
256CFT03427_1684hypothetical protein888
CF..7_1684
CF..4_1736
CF..0_1739
CSG_18690
CF..8_1863
CF..3_1749
CF..3_1760
CR44_08555

Annotated functions

Function#Occuringscore
No annotation data20.00
hypothetical protein60.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1684
CF..4_1736
CF..0_1739
CSG_18690
CF..3_1749
CF..3_1760
CR44_08555
1
CF..8_1863

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1684
CF..4_1736
CF..0_1739
CSG_18690
CF..3_1749
CF..3_1760
CR44_08555
1
CF..8_1863

03-427

03-427 : CFT03427_1684 [tract entry] [top]

Function: hypothetical protein
+0 MHYFIYPNGGHSLMLAHNLELLGHTYEFLDDFKVGLKIEENSDKINTTGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKVE
+100 PHKTAALLHSGMSDGKHLGDIIKYLENSKTCFVEIFTDYFNYQIRKSTQSNSDKILLIPFEYLKFINFKVVSATGSFEKFNKKLMVHPKSIKIMIPHAYT
+200 TPLALLSYYARRDIHIKEEIKEYQDMAIDYFIVPSRTNYKLFLDMGIDKNRLVPLGYPSLDLNLKHHKDRKAKKSVLIALYSTKSVDSIVPALKELLKNG
+300 YKVIFRPKPGQEEFECNQNILKEFNANKLFKFDTNTRKTSHAKIDDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPQHVFGKNFGKHRINGVDYSLA
+400 NSNLHIIAKNSNDILKAIKNLNLNEFKTKIKSYRDNEVYNLRNSSEAIANFIREKLNS

[show detailed alignment]

04/554

04/554 : CFF04554_1736 [tract entry] [top]

Function: hypothetical protein
+0 MHYFIYPNGGHSLMLAHNLEILGHTYEFLDDFKAGLKIEENLDKINTIGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKIE
+100 PHKTAALLHSGMSDGKHLGDIIKYLQNSETCFVEIFTDYFNYQIRKSSQSSDDKILLIPFEYLKFLNFKVVAATGNFEKFNKKLMVHPKSIKIMIPHGYT
+200 TPLALLSYYARKDIHIEEEIKEYQNMAIDYFIVPSRTNYKLFLDMGIDKNKLIPLGYPSLDLNLKNHKDLKAQKSILIALYSTKSVDSIVPALRDLLKNG
+300 YKVIFRPKPGQEELDCNQNILKEFSTNELFKFDTNTRKTSHAKIDDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPEHVFGKNFGKHRINKVDYSLA
+400 NSDLHIVAKNSNGIIKAIKNLNLDEFKTKIKSYRDNEVYNLRSSSEAIANFISEKLNS

[show detailed alignment]

82-40

82-40 : CFF8240_1739 [tract entry] [top]

Function: hypothetical protein
+0 MHYFIYPNGGHSLMLAHNLEILGHTYEFLDDFKAGLKIEENSDKINTIGGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKI
+100 EPHKTAALLHSGMSDGKHLGDIIKYLQNSKTCFVEIFTDYFNYQIRKSSQSSDDKILLIPFEYLKFLNFKVVAATGNFEKFNKKLMVHPKSIKIMIPHGY
+200 TTPLALLSYYARKDIHIEEEIKEYQNMAIDYFIVPSRTNYKLFLDMGIDKNKLVPLGYPSLDLNLKNHKDLKAQKSILIALYSTKSVDSIVPALRDLLKN
+300 GYKVIFRPKPGQEELDCNQNILKEFSTNELFKFDTNTRKTSHAKIDDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPEHVFGKNFGKHRINKVDYSL
+400 ANSDLHIVAKNSNDIIKAIKNLNLDEFKTKIKSYRDNEVYNLRSSSEAIANFISEKLNS

[show detailed alignment]

84-112

84-112 : CSG_18690 [tract entry] [top]

Function: hypothetical protein
+0 MHYFIYPNGGHSLMLAHNLEILGHTYEFLDDFKAGLKIEENSDKINTIGGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKI
+100 EPHKTAALLHSGMSDGKHLGDIIKYLQNSKTCFVEIFTDYFNYQIRKSSQSSDDKILLIPFEYLKFLNFKVVAATGNFEKFNKKLMVHPKSIKIMIPHGY
+200 TTPLALLSYYARKDIHIEEEIKEYQNMAIDYFIVPSRTNYKLFLDMGIDKNKLVPLGYPSLDLNLKNHKDLKAQKSILIALYSTKSVDSIVPALRDLLKN
+300 GYKVIFRPKPGQEELDCNQNILKEFSTNELFKFDTNTRKTSHAKIDDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPEHVFGKNFGKHRINKVDYSL
+400 ANSDLHIVAKNSNDIIKAIKNLNLDEFKTKIKSYRDNEVYNLRSSSEAIANFISEKLNS

[show detailed alignment]

97/608

97/608 : CFV97608_1863 [tract entry] [top]

Function: No annotation data
+0 MREDFEELDEELDDDMEEQDLDKNFEDEFNDDKKDSYNYDENDYSYDDEDEEESYEY

No BLAST hits


SP3

SP3 : CFTSP3_1749 [tract entry] [top]

Function: hypothetical protein
+0 MHYFIYPNGGHSLMLAHNLELLGHTYEFLDDFKVGLKIEENSDKINTTGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKIE
+100 PHKTAALLHSGMSDGKHLGDIIKYLENSKTCFVEIFTDYFNYQIRKSTQSNSDKILLIPFEYLKFINFKVVSATGSFEKFNKKLMVHPKSIKIMIPHGYT
+200 TPLALLSYYARRDIHIKEEIKEYQDMAIDYFIVPSRTNYKLFLDMGIDKNRLIPLGYPSLDLNLKHHKDRKAKKSVLIALYSTKSVDSIVPALRELLKNG
+300 YKVIFRPKPGQEEFECNQNILKEFNANKLFKFDTNTRKTSHAKIDDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPQHVFGKNFGKHRINGVDYSLA
+400 NSNLHIIAKNSNDILKAIKNLNLNEFKTKIKSYRDNEVYNLRNSSEAIANFIREKLNS

[show detailed alignment]

cfvi03/293

cfvi03/293 : CFVI03293_1760 [tract entry] [top]

Function: No annotation data
+0 MREDFEELDEELDDDMEEQDLDKNFEDEFNDDKKDSYNYDENDYSYDDEDEEESYEY

No BLAST hits


pet-3

pet-3 : CR44_08555 [tract entry] [top]

Function: hypothetical protein
+0 INTTGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKIEPHKTAALLHSGMSDGKHLGDIIKYLENSKTCFVEIFTDYFNYQI
+100 RKSTQSNSDKILLIPFEYLKFINFKVVSATGSFEKFNKKLMVHPKSIKIMIPHGYTTPLALLSYYARRDIHIKEEIKEYQDMAIDYFIVPSRTNYKLFLD
+200 MGIDKNRLIPLGYPSLDLNLKHHKDRKAKKSVLIALYSTKSVDSIVPALKELLKNGYKVIFRPKPGQEEFECNQNILKEFNANKLFKFDTNTRKTSHAKI
+300 DDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPQHVFGKNFGKHRINGVDYSLANSNLHIIAKNSNDILKAIKNLNLNEFKTKIKSYRDNEVYNLRNS
+400 SEAIANFIREKLNS

[show detailed alignment]