Gene group 100

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
100BN867_14120glycosyl transferase family 25556Cj1136
Cj1138
CJ..6_1153
A911_05505
A911_05515
PJ16_05920
PJ16_05930
PJ17_05820
PJ17_07545
N135_01173
N135_01175
N564_02160
N564_02170
N565_02240
N565_02250
N755_02295
N755_02305
PJ18_05635
PJ19_06185
PJ19_06195
BN.._14120
M635_01385
C8J_1347
CJH_07560
CJSA_1078
CJSA_1080
IC..1_1374
IC..1_1094
ER.._01245
A0.._05915
Cj..5_1153
AX.._05590
Cj..6_1442
Cj..6_1153
Cj..7_1442
Cj..7_1153
A0.._06870
A0.._06880
QZ67_01214
G157_01675
CINS_1209
UP..0_0303
UP..0_1227
UP..0_1229
UP..9_1462
Cla_1242
UP..1_0305
CD56_01490
CD56_06415
CPEL_1348
CPEL_1350
CA..4_1253
CA..4_1255
CS..1_1431
CS..3_1526
CVOL_0293

Annotated functions

Function#Occuringscore
glycosyl transferase family 211.00
glycosyl transferase, group 2 family protein10.80
putative sugar transferase20.71
Beta-1,3-galactosyltransferase / Beta-1,4-galactosyltransferase10.38

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
BN.._14120
1
CJH_07560
IC..1_1374
Cj..6_1442
Cj..7_1442

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
BN.._14120
1
CJH_07560
IC..1_1374
Cj..6_1442
Cj..7_1442

4031

4031 : BN867_14120 [tract entry] [top]

Function: Beta-1,3-galactosyltransferase / Beta-1,4-galactosyltransferase
+0 MNKTVGVVIPIYNVEKYLKECLDSVVNQTYKNLQVVLVNDGSTDENSFNIAKEYTLKDERFILFDKKNGGHSSAKNVGIEYFSGEYILKNKTQILEKNSL
+100 IEFNIEGNNPHEIYTVYKSYEAFHTTKDFYPSIDYIIFLDSDDYWELDCIEECVKRMNDVDVLWFDYKFLNKNKATQMEIYNYTKEQIITPLQWLKRTRE
+200 IGNYLFWYAWQGMIDFTFLQKINIKFINQIIHEDHHFGIALFSMTDNIYIYPEKKYIYRFRESSVSNQKQYSINTNSYLYTLYIEFDKNTYELKRYQMSM
+300 NWIFTCLELIKVLKYNSNNAISILVEQTFLPTLLDRTLIIFFIDKDPLLLKNKLQELKDYFKKFHLSGAECLKYQLSYRLGQFVLSNYRSLRGLIKIVLN
+400 AKKMILNIQKEQELFQATIKNYPFIVFSSSSEDLESRKIKKHYSYRLGRFLKIILI

[show detailed alignment]

F38011

F38011 : CJH_07560 [tract entry] [top]

Function: glycosyl transferase family 2
+0 MNKTVGVVIPIYNVEKYLKECLDSVVNQTYKNLQVVLVNDGSTDENSFNIAKEYTLKDERFILFDKKNGGLSSARNVGIEYFSGEYILKNKTQILETNSL
+100 IEFNIEGNNPYEIYTVYKSYKAFHTTKDLADFIYPSIDYIIFLDSDDFWELDCIEECVKRMNRVDVLWFDYKFLNKNKTTQMEIYNYTKEQIITPLQWLK
+200 RTREIGNYLFWYAWQGMIDFTFLQKINIKFINQIIHEDHHFGIALFSMTDNIYIYPEKKYIYRFRESSISNQKQYSINTNSYLYALYIEFNKNTYELKRY
+300 QMSMNWIFTCLELIKVLKYNSNNEISILVEQTFLPTLLDRTLIIFFIDKDPLLLKNKLQELKDYFKKFHLSGAECLKYQLSYRLGQFVLSNYRSLRGLIK
+400 IVLNAKKVILNIQKEQELFQTTIKNYPFIVFSSSSEDLESRKIKKHYSYRLGQFLKIILI

[show detailed alignment]

ICDCCJ07001

ICDCCJ07001 : ICDCCJ07001_1374 [tract entry] [top]

Function: glycosyl transferase, group 2 family protein
+0 MNKTVGVVIPIYNVEKYLKECLDSVINQTYKNLQVILVNDGSTDENSFNIAKEYTLKDERFILFDKKNGGLSSARNVGIEYFSGEYILKNKTQILETNPL
+100 IEFNIEGNNPYEIYTVYKSYKAFHTTKDFYPSIDYIIFLDSDDFWELDCIEECAKRMNGVDVLWFDYKFLNKNKTTQMEIYNYTKEQIITPLQWLKRTRE
+200 IGNYLFWYAWQGMIDFTFLQKINIKFINQIIHEDHHFGIALFSITDNIYIYPEKKYIYRFRESSISNQKQYSINTNSYLYALYIEFDKNTYELKRYQMSM
+300 NWIFTCLELIKVLKYNSNNEISILVEQTFLPTLLDRTLIIFFIDKDPLLLKNKLQELKDYFEKFHLSGAECLKYQLSYRLGQFVLSNYRSLRGLIKIVLN
+400 AKKMILNIQKEQELFQETIKNYPFIVFSSSSEDLESRKIKKHYSYRLGKFLKIILI

[show detailed alignment]

RM3196

RM3196 : CjjRM3196_1442 [tract entry] [top]

Function: putative sugar transferase
+0 MNKTVGVVIPIYNVEKYLKECLDSVINQTYKNLQVILVNDGSTDENSFNIAKEYTLKDERFILFDKKNGGLSSARNVGIEYFSGEYILKNKTQILETNPL
+100 IEFNIEGNNPYEIYTVYKSYKAFHTTKDFYPSIDYIIFLDSDDFWELDCIEECAKRMNGVDVLWFDYKFLNKNKTTQMEIYNYTKEQIITPLQWLKRTRE
+200 IGNYLFWYAWQGMIDFTFLQKINIKFINQIIHEDHHFGIALFSITDNIYIYPEKKYIYRFRESSISNQKQYSINTNSYLYALYIEFDKNTYELKRYQMSM
+300 NWIFTCLELIKVLKYNSNNEISILVEQTFLPTLLDRTLIIFFIDKDPLLLKNKLQELKDYFEKFHLSGAECLKYQLSYRLGQFVLSNYRSLRGLIKIVLN
+400 AKKMILNIQKEQELFQETIKNYPFIVFSSSSEDLESRKIKKHYSYRLGKFLKIILI

[show detailed alignment]

RM3197

RM3197 : CjjRM3197_1442 [tract entry] [top]

Function: putative sugar transferase
+0 MNKTVGVVIPIYNVEKYLKECLDSVINQTYKNLQVILVNDGSTDENSFNIAKEYTLKDERFILFDKKNGGLSSARNVGIEYFSGEYILKNKTQILETNPL
+100 IEFNIEGNNPYEIYTVYKSYKAFHTTKDFYPSIDYIIFLDSDDFWELDCIEECAKRMNGVDVLWFDYKFLNKNKTTQMEIYNYTKEQIITPLQWLKRTRE
+200 IGNYLFWYAWQGMIDFTFLQKINIKFINQIIHEDHHFGIALFSITDNIYIYPEKKYIYRFRESSISNQKQYSINTNSYLYALYIEFDKNTYELKRYQMSM
+300 NWIFTCLELIKVLKYNSNNEISILVEQTFLPTLLDRTLIIFFIDKDPLLLKNKLQELKDYFEKFHLSGAECLKYQLSYRLGQFVLSNYRSLRGLIKIVLN
+400 AKKMILNIQKEQELFQETIKNYPFIVFSSSSEDLESRKIKKHYSYRLGKFLKIILI

[show detailed alignment]