Analysis of poly-G tracts in 13826


Strain name: 13826
Filepath: ../polyG/campy.new\38828-157101370.gb
Species: C. concisus

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


TractNoContigLocationTractOn lengthGene GroupOffset from geneGeneLengthFunctionNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0CP00079295960C9None1942424bp downstream of CCC13826_113589hypothetical proteinCCC13826_1135
1CP000792115659G9None1953535bp downstream of CCC13826_1161291tRNA(i6A37) synthaseCCC13826_1161CCON33237_0243CCV52592_0816CFT03427_0224CFF04554_0217CFF8240_0216CSG_2990CFV97608_0219CFTSP3_0222CFVI03293_0217CR44_01130CGRAC_0325CHL_0272CHH_0203CIG1485E_0229CIG2463D_0234CIG11343_0180CUREO_1600CVOL_1418
2CP000792231556G771960CCC13826_1936927hypothetical proteinCCC13826_1936
3CP000792392731G14None197108108bp downstream of CCC13826_0964483pyruvate kinase ICj0392cCJJ81176_0415A911_01905PJ16_01905PJ17_01905N135_00436N564_00375N565_00425N755_00425PJ18_01905PJ19_02170JJD26997_1566BN867_03650M635_06270UC78_0378C8J_0367CJ8421_01965RC25_01945CJM1cam_0370CJH_01950CJSA_0365ICDCCJ07001_359CJM1_0370MTVDSCj20_0362ERS445056_00386A0W68_01895H730_02525CJE0441CjjRM1285_0368AXW77_01870CjjRM3196_0374CjjRM3197_0374CJS3_0382A0W69_02785QZ67_00394N149_0389AB430_03495G157_06680VC76_02055AR446_06155ATE51_03430YSQ_07925YSS_01735YSU_06925A6K30_06780CCC13826_0964CCON33237_1542CCV52592_1356CFT03427_0633CFF04554_0623CFF8240_0630CSG_6580CFV97608_0676CFTSP3_0631CFVI03293_0626CR44_03220CGRAC_0945CHAB381_1635CHL_1264CHH_1138CIG1485E_0723CIG2463D_0724CIG11343_0681CINS_0545UPTC4110_0482CONCH_0485UPTC3659_0507Cla_0479UPTC16701_0477UPTC16712_0485CD56_02385CPEL_0581CAQ16704_0500CSUB8521_0514CSUB8523_0500CUREO_0321CVOL_0564
4CP000792588986G9None198-88bp upstream of CCC13826_1603101hypothetical proteinCCC13826_1603
5CP000792638908C991990CCC13826_087897hypothetical proteinCCC13826_0878
6CP000792773302G7None200-234234bp upstream of CCC13826_1611457Na+-dependent transporter, SNF familyCj0601cCJJ81176_0629A911_02935PJ16_03000PJ17_02915N135_00652N564_00589N565_00635N755_00634PJ18_03005PJ19_03265JJD26997_1069BN867_06100M635_07370UC78_0585C8J_0563CJ8421_02935RC25_02900CJM1cam_0578CJH_03050CJSA_0569ICDCCJ07001_548CJM1_0578MTVDSCj20_0621ERS445056_00588A0W68_02830H730_03880CJE0704CjjRM1285_0574AXW77_02945CjjRM3196_0580CjjRM3197_0580CJS3_0591A0W69_03875QZ67_00617N149_0574AB430_04420G157_05750VC76_03035AR446_05190ATE51_02386YSQ_06295YSS_02750YSU_05935A6K30_05805CCC13826_1611CCON33237_0739CCV52592_1818CFT03427_0545CFF04554_0534CFF8240_0541CSG_1870CFV97608_0585CFTSP3_0546CFVI03293_0537CR44_02775CGRAC_1765CHAB381_0775CHL_1281CHH_1156CIG1485E_0685CIG2463D_0686CIG11343_0629CINS_0875UPTC4110_0884CONCH_0859UPTC3659_1118Cla_0909UPTC16701_0875UPTC16712_0905CD56_04695CPEL_1009CAQ16704_0893CSUB8521_1069CSUB8523_1174CUREO_0264CVOL_0879
7CP0007921045516AT662010CCC13826_1097216hypothetical protein (GDYXXLXY domain)CCC13826_1097
8CP0007921080347C9None202-8181bp upstream of CCC13826_0127366hypothetical proteinCCC13826_0127CCON33237_0039
9CP0007921172645T13None203-5252bp upstream of CCC13826_0604156hypothetical proteinCCC13826_0604CCON33237_0871
10CP0007921296266TA7None204-2929bp upstream of CCC13826_2027213hypothetical proteinCCC13826_2027
11CP0007921412854G7None2051313bp downstream of CCC13826_0410912zinc-dependent peptidase, M16 familyCCC13826_0410CCON33237_1375CCV52592_2215
12CP0007921532698TA882060CCC13826_0523359glycosyltransferase, family 1CCC13826_0523
13CP0007921547169G772070CCC13826_0536662asparagine synthase (glutamine-hydrolyzing)CCC13826_0536CHL_0066
14CP0007921550342G10102080CCC13826_0538302hypothetical proteinCCC13826_0538CHL_0064
15CP0007922042611A10102090CCC13826_186496hypothetical proteinCCC13826_1864