CjjRM3197_1335 vs: Cj1318 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 2181.00 bits: 944.62 e-value: 0.000000
length: 653 gaps: 7 id: 510 positives: 556 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
Cj1318 +1246678 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1246975

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
Cj1318 +1246978 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1247275

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDP DALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
Cj1318 +1247278 IILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1247575

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
Cj1318 +1247578 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1247875

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
Cj1318 +1247878 YQNSA----NYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1248175

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
Cj1318 +1248178 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1248475

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
Cj1318 +1248478 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1248634

CjjRM3197_1335 vs: Cj1333 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: PseD protein

Score: 2217.00 bits: 960.15 e-value: 0.000000
length: 668 gaps: 21 id: 511 positives: 562 coverage: 0.78 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSN+ LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
Cj1333 +1259689 MTFTPTQKELFNKNIEALSNLFLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1259986

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+LQTSSLDIE FSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL ++FK
Cj1333 +1259989 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILQTSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKD +1260286

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ T
Cj1333 +1260289 SILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLT +1260586

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYAK+G SH +
Cj1333 +1260589 SEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKD +1260886

Cj..7_1335 +401 HIFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEP +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEP
Cj1333 +1260889 --YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEP +1261186

Cj..7_1335 +501 LSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNL---AIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVL +600
LSLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +E+ L I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVL
Cj1333 +1261189 LSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVL +1261486

Cj..7_1335 +601 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +668
NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
Cj1333 +1261489 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1261690

CjjRM3197_1335 vs: Cj1335 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1948bp / 649aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 173.00 bits: 78.44 e-value: 0.000000
length: 59 gaps: 0 id: 57 positives: 57 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj1335 +1263507 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1263681

Score: 2077.00 bits: 899.76 e-value: 0.000000
length: 596 gaps: 7 id: 455 positives: 501 coverage: 0.79 query coverage 0.77

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++
Cj1335 +1263676 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTE +1263973

Cj..7_1335 +158 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +257
CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK I+ GNDP DALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTK
Cj1335 +1263976 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTK +1264273

Cj..7_1335 +258 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +357
QLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF
Cj1335 +1264276 QLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFS +1264573

Cj..7_1335 +358 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +457
Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++ A E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + +
Cj1335 +1264576 YAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA----NYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGIT +1264873

Cj..7_1335 +458 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +557
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KID
Cj1335 +1264876 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKID +1265173

Cj..7_1335 +558 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
EFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
Cj1335 +1265176 EFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1265461

CjjRM3197_1335 vs: CJJ81176_1336 in 81-176 (Campylobacter jejuni subsp. jejuni 81-176, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD

Score: 1651.00 bits: 716.00 e-value: 0.000000
length: 679 gaps: 28 id: 414 positives: 496 coverage: 0.63 query coverage 0.62

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKDNLDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
CJ..6_1336 +1249415 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDNLDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1249712

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAEN +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
CJ..6_1336 +1249715 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILST +1250012

Cj..7_1335 +201 FKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERV +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
CJ..6_1336 +1250015 IKISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERD +1250312

Cj..7_1335 +301 LETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNS +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ S
CJ..6_1336 +1250315 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +1250612

Cj..7_1335 +401 HPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEK +500
H + I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF K
CJ..6_1336 +1250615 HAKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPK +1250912

Cj..7_1335 +501 LEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLAR +600
L PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLAR
CJ..6_1336 +1250915 LNPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLAR +1251212

Cj..7_1335 +601 IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +679
IYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
CJ..6_1336 +1251215 IYVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1251449

CjjRM3197_1335 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 2266.00 bits: 981.29 e-value: 0.000000
length: 653 gaps: 8 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
A911_06490 +1262965 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1263262

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
A911_06490 +1263265 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1263562

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
A911_06490 +1263565 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1263862

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
A911_06490 +1263865 AEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1264162

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
A911_06490 +1264165 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1264462

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
A911_06490 +1264465 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1264762

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A911_06490 +1264765 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1264921

CjjRM3197_1335 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2231.00 bits: 966.19 e-value: 0.000000
length: 665 gaps: 18 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
A911_06480 +1259156 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1259453

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
A911_06480 +1259456 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1259753

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
A911_06480 +1259756 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAIT +1260053

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
A911_06480 +1260056 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1260353

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
A911_06480 +1260356 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1260653

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
A911_06480 +1260656 NKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPK +1260953

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
A911_06480 +1260956 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1261148

CjjRM3197_1335 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2225.00 bits: 963.61 e-value: 0.000000
length: 653 gaps: 10 id: 514 positives: 561 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ16_07340 +1354370 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1354667

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RL+VL T L+I+ + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
PJ16_07340 +1354670 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1354967

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ16_07340 +1354970 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1355267

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD+
PJ16_07340 +1355270 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDD +1355567

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+E W F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
PJ16_07340 +1355570 YQNSA----NYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1355867

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKID FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
PJ16_07340 +1355870 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1356167

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ16_07340 +1356170 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1356326

CjjRM3197_1335 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2218.00 bits: 960.59 e-value: 0.000000
length: 667 gaps: 18 id: 510 positives: 559 coverage: 0.79 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
PJ16_07410 +1367385 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1367682

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
PJ16_07410 +1367685 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1367982

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ16_07410 +1367985 SIISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1368282

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
PJ16_07410 +1368285 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1368582

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
PJ16_07410 +1368585 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1368882

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
PJ16_07410 +1368885 NKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +1369182

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFFKK +667
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF K
PJ16_07410 +1369185 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFFLK +1369383

CjjRM3197_1335 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2303.00 bits: 997.25 e-value: 0.000000
length: 672 gaps: 18 id: 537 positives: 576 coverage: 0.82 query coverage 0.80

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ16_07420 +1371194 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1371491

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
PJ16_07420 +1371494 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1371791

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ T
PJ16_07420 +1371794 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1372091

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-- +400
SEFFNNDF EFDKDV FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
PJ16_07420 +1372094 SEFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1372391

Cj..7_1335 +401 ----DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKL
PJ16_07420 +1372394 YKNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQNT---ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKL +1372691

Cj..7_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
EPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNP
PJ16_07420 +1372694 EPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNP +1372991

Cj..7_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +672
KTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
PJ16_07420 +1372994 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1373207

CjjRM3197_1335 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2266.00 bits: 981.29 e-value: 0.000000
length: 653 gaps: 8 id: 516 positives: 561 coverage: 0.80 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ17_06980 +1346475 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1346772

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
PJ17_06980 +1346775 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1347072

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ17_06980 +1347075 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1347372

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ FV HP +YL+ + F++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
PJ17_06980 +1347375 AEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLK--GKTFIITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1347672

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
PJ17_06980 +1347675 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1347972

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
PJ17_06980 +1347975 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1348272

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWME+V
PJ17_06980 +1348275 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMEKV +1348431

CjjRM3197_1335 vs: PJ17_07050 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2168.00 bits: 939.02 e-value: 0.000000
length: 668 gaps: 21 id: 504 positives: 554 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F PTQKELFNKNIE+LSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
PJ17_07050 +1359494 MIFTPTQKELFNKNIESLSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1359791

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T +I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL ++FK
PJ17_07050 +1359794 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKD +1360091

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ T
PJ17_07050 +1360094 SILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLT +1360391

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYAK+G SH +
PJ17_07050 +1360394 SEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKD +1360691

Cj..7_1335 +401 HIFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEP +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEP
PJ17_07050 +1360694 --YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEP +1360991

Cj..7_1335 +501 LSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNL---AIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVL +600
LSLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +E+ L I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVL
PJ17_07050 +1360994 LSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVL +1361291

Cj..7_1335 +601 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +668
NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
PJ17_07050 +1361294 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1361495

CjjRM3197_1335 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2258.00 bits: 977.84 e-value: 0.000000
length: 653 gaps: 10 id: 519 positives: 563 coverage: 0.80 query coverage 0.78

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ17_07060 +1363312 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1363609

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHIL+FS ELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
PJ17_07060 +1363612 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILNFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1363909

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ17_07060 +1363912 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1364209

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
PJ17_07060 +1364212 AEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSHPDD +1364509

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
PJ17_07060 +1364512 YQNSA----NYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1364809

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
PJ17_07060 +1364812 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1365109

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ17_07060 +1365112 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1365268

CjjRM3197_1335 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2231.00 bits: 966.19 e-value: 0.000000
length: 665 gaps: 18 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N135_01421 +1337388 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1337685

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N135_01421 +1337688 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1337985

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N135_01421 +1337988 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAIT +1338285

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
N135_01421 +1338288 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1338585

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N135_01421 +1338588 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1338885

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
N135_01421 +1338888 NKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPK +1339185

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N135_01421 +1339188 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1339380

CjjRM3197_1335 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2266.00 bits: 981.29 e-value: 0.000000
length: 653 gaps: 8 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N135_01423 +1341197 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1341494

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N135_01423 +1341497 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1341794

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N135_01423 +1341797 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1342094

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
N135_01423 +1342097 AEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1342394

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N135_01423 +1342397 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1342694

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
N135_01423 +1342697 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1342994

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N135_01423 +1342997 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1343153

CjjRM3197_1335 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2231.00 bits: 966.19 e-value: 0.000000
length: 665 gaps: 18 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N564_02285 +1299219 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1299516

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N564_02285 +1299519 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1299816

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N564_02285 +1299819 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAIT +1300116

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
N564_02285 +1300119 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1300416

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N564_02285 +1300419 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1300716

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
N564_02285 +1300719 NKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPK +1301016

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N564_02285 +1301019 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1301211

CjjRM3197_1335 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2266.00 bits: 981.29 e-value: 0.000000
length: 653 gaps: 8 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N564_02295 +1303028 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1303325

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N564_02295 +1303328 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1303625

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N564_02295 +1303628 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1303925

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
N564_02295 +1303928 AEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1304225

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N564_02295 +1304228 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1304525

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
N564_02295 +1304528 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1304825

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N564_02295 +1304828 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1304984

CjjRM3197_1335 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2266.00 bits: 981.29 e-value: 0.000000
length: 653 gaps: 8 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N565_02385 +1341584 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1341881

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N565_02385 +1341884 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1342181

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N565_02385 +1342184 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1342481

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
N565_02385 +1342484 AEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1342781

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N565_02385 +1342784 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1343081

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
N565_02385 +1343084 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1343381

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N565_02385 +1343384 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1343540

CjjRM3197_1335 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2231.00 bits: 966.19 e-value: 0.000000
length: 665 gaps: 18 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N565_02375 +1337775 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1338072

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N565_02375 +1338075 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1338372

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N565_02375 +1338375 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAIT +1338672

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
N565_02375 +1338675 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1338972

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N565_02375 +1338975 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1339272

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
N565_02375 +1339275 NKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPK +1339572

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N565_02375 +1339575 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1339767

CjjRM3197_1335 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2266.00 bits: 981.29 e-value: 0.000000
length: 653 gaps: 8 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
N755_02445 +1341567 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1341864

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N755_02445 +1341867 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1342164

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N755_02445 +1342167 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1342464

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
N755_02445 +1342467 AEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1342764

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N755_02445 +1342767 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1343064

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
N755_02445 +1343067 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1343364

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N755_02445 +1343367 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1343523

CjjRM3197_1335 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2231.00 bits: 966.19 e-value: 0.000000
length: 665 gaps: 18 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
N755_02435 +1337758 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1338055

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N755_02435 +1338058 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1338355

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N755_02435 +1338358 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAIT +1338655

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
N755_02435 +1338658 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1338955

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
N755_02435 +1338958 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1339255

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
N755_02435 +1339258 NKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPK +1339555

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N755_02435 +1339558 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1339750

CjjRM3197_1335 vs: PJ18_06860 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2215.00 bits: 959.29 e-value: 0.000000
length: 667 gaps: 10 id: 511 positives: 558 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ18_06860 +1302529 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1302826

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
PJ18_06860 +1302829 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1303126

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ18_06860 +1303129 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1303426

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF+EFD+D+ F+ HP +YL+ RN ++ Y+ L DF Y +GFSVAHM YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
PJ18_06860 +1303429 AEFFNHDFREFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDD +1303726

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYG + V T+ +W LF+N FE ++ + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
PJ18_06860 +1303729 YQNSA----NYESQMYEHILTKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1304026

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
PJ18_06860 +1304029 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1304326

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +667
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
PJ18_06860 +1304329 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1304527

CjjRM3197_1335 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2263.00 bits: 980.00 e-value: 0.000000
length: 664 gaps: 16 id: 520 positives: 565 coverage: 0.80 query coverage 0.78

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
PJ18_06850 +1298720 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1299017

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
PJ18_06850 +1299020 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1299317

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ18_06850 +1299320 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1299617

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF+EFDKD+ F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD+
PJ18_06850 +1299620 AEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDD +1299917

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLN
PJ18_06850 +1299920 YQNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLN +1300217

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
PJ18_06850 +1300220 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1300517

Cj..7_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
PJ18_06850 +1300520 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1300709

CjjRM3197_1335 vs: PJ18_06785 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2249.00 bits: 973.96 e-value: 0.000000
length: 654 gaps: 8 id: 515 positives: 558 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ18_06785 +1284798 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1285095

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
PJ18_06785 +1285098 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1285395

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ T
PJ18_06785 +1285398 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1285695

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
PJ18_06785 +1285698 SEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1285995

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
PJ18_06785 +1285998 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1286295

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKE
PJ18_06785 +1286298 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKE +1286595

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ18_06785 +1286598 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1286757

CjjRM3197_1335 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2225.00 bits: 963.61 e-value: 0.000000
length: 653 gaps: 10 id: 514 positives: 561 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
PJ19_07340 +1352981 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1353278

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RL+VL T L+I+ + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
PJ19_07340 +1353281 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1353578

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ19_07340 +1353581 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1353878

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD+
PJ19_07340 +1353881 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDD +1354178

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+E W F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
PJ19_07340 +1354181 YQNSA----NYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1354478

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKID FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
PJ19_07340 +1354481 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1354778

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ19_07340 +1354781 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1354937

CjjRM3197_1335 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2303.00 bits: 997.25 e-value: 0.000000
length: 672 gaps: 18 id: 537 positives: 576 coverage: 0.82 query coverage 0.80

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
PJ19_07420 +1369805 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1370102

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
PJ19_07420 +1370105 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1370402

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ T
PJ19_07420 +1370405 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1370702

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-- +400
SEFFNNDF EFDKDV FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
PJ19_07420 +1370705 SEFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1371002

Cj..7_1335 +401 ----DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKL
PJ19_07420 +1371005 YKNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQNT---ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKL +1371302

Cj..7_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
EPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNP
PJ19_07420 +1371305 EPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNP +1371602

Cj..7_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +672
KTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
PJ19_07420 +1371605 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1371818

CjjRM3197_1335 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2218.00 bits: 960.59 e-value: 0.000000
length: 667 gaps: 18 id: 510 positives: 559 coverage: 0.79 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
PJ19_07410 +1365996 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1366293

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
PJ19_07410 +1366296 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1366593

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
PJ19_07410 +1366596 SIISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1366893

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
PJ19_07410 +1366896 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1367193

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y L T AYGG+ + T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
PJ19_07410 +1367196 Y----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1367493

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
PJ19_07410 +1367496 NKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +1367793

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFFKK +667
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF K
PJ19_07410 +1367796 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFFLK +1367994

CjjRM3197_1335 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor

Score: 2583.00 bits: 1118.03 e-value: 0.000000
length: 666 gaps: 7 id: 573 positives: 607 coverage: 0.88 query coverage 0.86

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKELFNKNIEALSN+ LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGI
JJ..7_0374 +331842 MTFIPTQKELFNKNIEALSNVFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGI +332139

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+L+ L + + CSSKPFFQFSRIYFLEL+SHYYERFHED+L +N KLAE FK
JJ..7_0374 +331542 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETFKK +331839

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ HGND DALQGIEQFVYNLPSMITHPSY+ELLAKRK LSDTAIIVSTGPSLTKQLPLLKKYASKAT+FCADSAYPILAK+G++PDYVLSLERVLET
JJ..7_0374 +331242 VILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVLET +331539

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDFKEFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYA FINYLKLDDFGYF MGFSVA MAY+L+L L++KNII IGQDLAY+K+G SHPDE
JJ..7_0374 +330942 SEFFNNDFKEFDKDILFVLKSYAHPHTTKYLQKNNRNFMLVSTYANFINYLKLDDFGYFTMGFSVANMAYHLALLLQYKNIILIGQDLAYSKDGSSHPDE +331239

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
HIFG LDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFR IFEQD+ + YNCTEGGARIEG IEKPFLWACENLL KDL+KPFEKLEPLSL
JJ..7_0374 +330642 HIFGTLDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRSIFEQDITNYH----IPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEPLSLK +330939

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKVC+SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAI KIDEFKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED
JJ..7_0374 +330342 KQNEFLLKAYYKVCQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDV +330639

Cj..7_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +666
FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+K MERV +R KK S
JJ..7_0374 +330042 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR*EKRKLILKKIS +330237

CjjRM3197_1335 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factor

Score: 2174.00 bits: 941.61 e-value: 0.000000
length: 670 gaps: 30 id: 504 positives: 547 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF TQKELFNKNIEAL NI LKESLK+IKSSKFELILGKD LDINLK+TS L+++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+
JJ..7_0376 +335639 MTF--TQKELFNKNIEALGNIFLKESLKQIKSSKFELILGKDKLDINLKNTS---------DNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGV +335936

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
JJ..7_0376 +335339 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +335636

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRK LSDTAIIVSTGPSL KQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER T
JJ..7_0376 +335039 SILSHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSEFT +335336

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F++KS HP YL K +F LVSTYASFINY+KLDDFGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD+
JJ..7_0376 +334739 AEFFNHDFGEFDKDICFIIKSVVHPNAIHYLNKKTDDFTLVSTYASFINYVKLDDFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDD +335036

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ A K + T AYGG+G V T+ +W +F+ EQDVEKIQKYLDTKVYNCTEGGARIEG IEKPFLWACENLL KDL+KPFEKLEPLSL
JJ..7_0376 +334439 YQNSATYESKAHE---PILTKAYGGKGEVKTHHIWLMFKQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPLSLK +334736

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLA----------IEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIY +600
KQNEFLLKAYYKVCKSI+HCRDF ++ I+ ++SL +E+ L +IDE N +DL +ILGPLLTQFELNLARIY
JJ..7_0376 +334139 KQNEFLLKAYYKVCKSIEHCRDFNDKFIKSYKKIKNSFMSLQNSQENEILVKKIIKNIDKIKTQIDELYN------TQKDLIQILGPLLTQFELNLARIY +334436

Cj..7_1335 +601 VLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +670
VLNPKTKED FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKLNKWMERV FF
JJ..7_0376 +333839 VLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLNKWMERVRR*ERNFF +334046

CjjRM3197_1335 vs: JJD26997_0396 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1933bp / 644aa PV: Yes
Function: No annotation data

Score: 172.00 bits: 78.01 e-value: 0.000000
length: 59 gaps: 0 id: 55 positives: 56 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTF PTQKELFNKNIEALSNI LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGG
JJ..7_0396 +352487 MTFTPTQKELFNKNIEALSNIFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGG +352661

Score: 2082.00 bits: 901.92 e-value: 0.000000
length: 596 gaps: 11 id: 457 positives: 508 coverage: 0.79 query coverage 0.77

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGYSENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+L+ L + +
JJ..7_0396 +352318 GGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNE +352615

Cj..7_1335 +158 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +257
CSSKPFFQFSRIYFLEL+SHYYERFHED+L +N KLAENFK I+ HGND DALQGIEQFVYNLPSMITHPSY+ELLAKRK LSDTAIIVSTGPSLTK
JJ..7_0396 +352018 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAENFKKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTK +352315

Cj..7_1335 +258 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +357
QLPLLKKYASKAT+FCADSAYPILAK+G++PDYV LER T+EFFN DF EFD+D+ F+ HP +YL+ RN ++ +F Y+ L DF
JJ..7_0396 +351718 QLPLLKKYASKATLFCADSAYPILAKQGIRPDYVCMLERTDFTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLTFPYYINLKDFS +352015

Cj..7_1335 +358 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +457
Y +GFSVAHM+Y+LS+ L HKNII IGQDLAYAKNGNSHPD++ + E+ +Y+ + T AYGG+G V T+EVW F+ + E + I+ + T
JJ..7_0396 +351418 YAAVGFSVAHMSYFLSVLLNHKNIILIGQDLAYAKNGNSHPDDY----QNSATYESQTYEPILTKAYGGKGEVKTHEVWIFFKQMLETMI--IEYSIPT- +351715

Cj..7_1335 +458 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +557
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL KQNEFLLKAYYKVCKSI+HC+DFSKILS+DFENIQSIYLSLNEKEE LNLAI KID
JJ..7_0396 +351118 -YNCTEGGARIEGTIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKSIEHCKDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKID +351415

Cj..7_1335 +558 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
EFKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+K MERV
JJ..7_0396 +350818 EFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERV +351103

CjjRM3197_1335 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factor

Score: 2321.00 bits: 1005.02 e-value: 0.000000
length: 668 gaps: 13 id: 530 positives: 578 coverage: 0.81 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
BN.._13180 +1295983 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1296280

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFH+DILGLNKKLAENFK
BN.._13180 +1296283 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKN +1296580

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK++SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ T
BN.._13180 +1296583 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1296880

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAY K+G SH +
BN.._13180 +1296883 SEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSHTKD +1297180

Cj..7_1335 +401 HIFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEP +500
+ LD +++ Y T AYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEP
BN.._13180 +1297183 --YSNLDKHEGHFQRDKNKY--TTQAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEP +1297480

Cj..7_1335 +501 LSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVL +600
LSLNKQNEFLLKAYYKV +SIKHCRDF + I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVL
BN.._13180 +1297483 LSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYNKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVL +1297780

Cj..7_1335 +601 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +668
NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEK+KERKL+KWMERV FF
BN.._13180 +1297783 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR*ERNFF +1297984

CjjRM3197_1335 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 2317.00 bits: 1003.29 e-value: 0.000000
length: 664 gaps: 9 id: 529 positives: 572 coverage: 0.82 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
BN.._13200 +1299825 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1300122

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFH+DILGLNKKLAENFK
BN.._13200 +1300125 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKN +1300422

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK++SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
BN.._13200 +1300425 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1300722

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ FV HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
BN.._13200 +1300725 AEFFNHDFGEFDKDIIFVCAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSHPDD +1301022

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + +D YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
BN.._13200 +1301025 YQNSA----TYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1301322

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
BN.._13200 +1301325 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1301622

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG-ERGTFFKK +664
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEK+KERKL+KWMERV ER K
BN.._13200 +1301625 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR*ERKIILTK +1301814

CjjRM3197_1335 vs: M635_02360 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2156.00 bits: 933.84 e-value: 0.000000
length: 668 gaps: 21 id: 500 positives: 556 coverage: 0.77 query coverage 0.75

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
M635_02360 +444737 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +445034

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+L T +I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL ++FK
M635_02360 +445037 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKD +445334

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ T
M635_02360 +445337 SILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLT +445634

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYAK+G SH +
M635_02360 +445637 SEFFNNDFGEFDKDIVFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKD +445934

Cj..7_1335 +401 HIFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEP +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEP
M635_02360 +445937 --YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEP +446234

Cj..7_1335 +501 LSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVL +600
LSLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVL
M635_02360 +446237 LSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVL +446534

Cj..7_1335 +601 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +668
NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV + +FF
M635_02360 +446537 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*KKSFF +446738

CjjRM3197_1335 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD protein

Score: 2108.00 bits: 913.13 e-value: 0.000000
length: 596 gaps: 9 id: 467 positives: 510 coverage: 0.79 query coverage 0.70

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ +
M635_02285 +431889 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNE +432186

Cj..7_1335 +158 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +257
CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTK
M635_02285 +432189 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTK +432486

Cj..7_1335 +258 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +357
QLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKDV FV HP +YL+ NR +++ Y F Y+KL F
M635_02285 +432489 QLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFD +432786

Cj..7_1335 +358 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +457
+ SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD++ + E Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T
M635_02285 +432789 FLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY----QNSANYENQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT- +433086

Cj..7_1335 +458 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +557
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAIEKID
M635_02285 +433089 -YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKID +433386

Cj..7_1335 +558 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
M635_02285 +433389 KFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +433674

CjjRM3197_1335 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2176.00 bits: 942.47 e-value: 0.000000
length: 654 gaps: 18 id: 506 positives: 552 coverage: 0.79 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
M635_02370 +448555 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +448852

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ +RLM+L TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
M635_02370 +448855 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSSELQSARLMILNTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +449152

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ T
M635_02370 +449155 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLT +449452

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL +KNIIFIGQDLAYA++G SH +
M635_02370 +449455 SEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAIGFSVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSHTKD +449752

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
M635_02370 +449755 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +450052

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL LL QFELNLARIYVLNPKTKE
M635_02370 +450055 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKE +450352

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
M635_02370 +450355 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +450514

CjjRM3197_1335 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2319.00 bits: 1004.15 e-value: 0.000000
length: 654 gaps: 8 id: 531 positives: 569 coverage: 0.82 query coverage 0.80

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
UC78_1278 +1249144 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1249441

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+S YYERFHEDILGLNKKLAE FK
UC78_1278 +1249444 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKN +1249741

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH +KPDYVLSLER+ T
UC78_1278 +1249744 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLT +1250041

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDK+V FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY S HL KNIIFIGQDLAYAK+G SH +
UC78_1278 +1250044 SEFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKD +1250341

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
UC78_1278 +1250344 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1250641

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKE
UC78_1278 +1250644 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +1250941

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
D FNK ILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
UC78_1278 +1250944 DVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1251103

CjjRM3197_1335 vs: UC78_1267 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2450.00 bits: 1060.66 e-value: 0.000000
length: 653 gaps: 6 id: 550 positives: 584 coverage: 0.84 query coverage 0.82

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
UC78_1267 +1234947 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1235244

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+S YYERFHEDILGLNKKLAE FK
UC78_1267 +1235247 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKN +1235544

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH +KPDYV LER T
UC78_1267 +1235547 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVCMLERKAIT +1235844

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
UC78_1267 +1235847 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1236144

Cj..7_1335 +401 HIFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLD K+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
UC78_1267 +1236147 YQNSA----SYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDAKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1236444

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED
UC78_1267 +1236447 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +1236744

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
FNK ILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
UC78_1267 +1236747 VFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1236903

CjjRM3197_1335 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical protein

Score: 2158.00 bits: 934.70 e-value: 0.000000
length: 666 gaps: 12 id: 502 positives: 554 coverage: 0.77 query coverage 0.75

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
UC78_1276 +1245311 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1245608

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+S YYERFHEDILGLNKKLAENFK
UC78_1276 +1245611 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENFKN +1245908

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH +KPDYVLSLER+ T
UC78_1276 +1245911 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLT +1246208

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDK+V FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY S HL KNIIFIGQDLAYAK+G SH +
UC78_1276 +1246211 SEFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKD +1246508

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
UC78_1276 +1246511 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1246808

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNP +600
LNKQNEFLLKAYYKVCKSI+HCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNP
UC78_1276 +1246811 LNKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNP +1247108

Cj..7_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +666
KTKED FNK ILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
UC78_1276 +1247111 KTKEDVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1247306

CjjRM3197_1335 vs: C8J_1253 in 81116; NCTC 11828 (Campylobacter jejuni subsp. jejuni 81116, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1644.00 bits: 712.98 e-value: 0.000000
length: 679 gaps: 28 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
C8J_1253 +1261837 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1262134

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAEN +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
C8J_1253 +1262137 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILST +1262434

Cj..7_1335 +201 FKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERV +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
C8J_1253 +1262437 IKISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERD +1262734

Cj..7_1335 +301 LETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNS +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ S
C8J_1253 +1262737 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +1263034

Cj..7_1335 +401 HPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEK +500
H + I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF K
C8J_1253 +1263037 HAKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPK +1263334

Cj..7_1335 +501 LEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLAR +600
L PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLAR
C8J_1253 +1263337 LNPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLAR +1263634

Cj..7_1335 +601 IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +679
IYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
C8J_1253 +1263637 IYVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1263871

CjjRM3197_1335 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factor

Score: 2259.00 bits: 978.27 e-value: 0.000000
length: 654 gaps: 13 id: 525 positives: 569 coverage: 0.81 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKELFNKNIEAL NILLKESLK+IKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLY YGFGNGI
CJ.._06665 +1261511 MTFIPTQKELFNKNIEALGNILLKESLKKIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGI +1261808

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
CJ.._06665 +1261811 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1262108

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ T
CJ.._06665 +1262111 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1262408

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MG SVA M+Y L+ +L +KNII IGQDLAYAK+G SH +
CJ.._06665 +1262411 SEFFNNDFGEFDKDIMFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKD +1262708

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + E+W +FR IFE D+ QK + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLS
CJ.._06665 +1262711 --YKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLS +1263008

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKVCKSI+HCRDFSKILS+DF+ IQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKE
CJ.._06665 +1263011 LNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFKKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKE +1263308

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJ.._06665 +1263311 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1263470

CjjRM3197_1335 vs: RC25_06245 in CJ677CC519 (Campylobacter jejuni strain CJ677CC519, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1653.00 bits: 716.86 e-value: 0.000000
length: 678 gaps: 26 id: 415 positives: 497 coverage: 0.63 query coverage 0.62

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLK+T LY + I EL +MLNTYNDKYLLYPVLYFYGFGNGI
RC25_06245 +1195347 MKFNLNQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKNTN---------DNTFLYGNVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1195644

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +200
LFKALLQNKNHQHIVVFEKDIEIIW+MFHILDFSNELQK L+++ T L SNF + F QFSRIYFLELIS YYER+ E+IL LN +
RC25_06245 +1195647 LFKALLQNKNHQHIVVFEKDIEIIWVMFHILDFSNELQKNNLIIINTNILSEFDLSNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNNTILSTI +1195944

Cj..7_1335 +201 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
RC25_06245 +1195947 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPYSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1196244

Cj..7_1335 +301 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
RC25_06245 +1196247 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1196544

Cj..7_1335 +401 PDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
+ I L +G +K E + +TAYGG+ V + WNLFR +FE + + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL
RC25_06245 +1196547 AKDFIHEKLHEGHFQKDENL---FTSTAYGGKDKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKL +1196844

Cj..7_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +600
PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARI
RC25_06245 +1196847 NPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLVQFELNLARI +1197144

Cj..7_1335 +601 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +678
YVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KL+ERK+ K++ER++ F KK+ S+
RC25_06245 +1197147 YVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLEERKMQKYLERIKNANK*NF*KKFRSY +1197378

CjjRM3197_1335 vs: CJM1cam_1292 in CJM1cam (Campylobacter jejuni strain CJM1cam, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor Maf-3/PseD

Score: 1644.00 bits: 712.98 e-value: 0.000000
length: 679 gaps: 28 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
CJ..m_1292 +1256137 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1256434

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAEN +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
CJ..m_1292 +1256437 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILST +1256734

Cj..7_1335 +201 FKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERV +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
CJ..m_1292 +1256737 IKISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERD +1257034

Cj..7_1335 +301 LETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNS +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ S
CJ..m_1292 +1257037 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +1257334

Cj..7_1335 +401 HPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEK +500
H + I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF K
CJ..m_1292 +1257337 HAKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPK +1257634

Cj..7_1335 +501 LEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLAR +600
L PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLAR
CJ..m_1292 +1257637 LNPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLAR +1257934

Cj..7_1335 +601 IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +679
IYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
CJ..m_1292 +1257937 IYVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1258171

CjjRM3197_1335 vs: CJH_06700 in F38011 (Campylobacter jejuni subsp. jejuni F38011, complete genome.)
Gene length: 1962bp / 654aa PV: Yes
Function: PseD protein

Score: 1735.00 bits: 752.24 e-value: 0.000000
length: 663 gaps: 17 id: 396 positives: 496 coverage: 0.61 query coverage 0.59

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q LFNKN+++L N LKE LKE+ + +ELILGKDNLDINLKDT LYQD IKEL ML TYN+KYLLYPVLYFYGFGNGI
CJH_06700 +1267863 MKFNKNQTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLDINLKDTK---------NHTFLYQDSIKELDIMLKTYNEKYLLYPVLYFYGFGNGI +1268160

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALL+NK H+H+V+FEK++EII IMFH+LDFS EL++ RL++L SL+ + + + CS+ PFF+FSR YFLEL S YYE+ +E+IL LN L + FK
CJH_06700 +1268163 LFKALLKNKHHKHLVIFEKELEIIKIMFHLLDFSQELEENRLLILDVNSLEFQDYYDLCSTSPFFEFSRTYFLELSSDYYEKDQEEILNLNNNLMDRFKN +1268460

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
+I+ GNDP DALQGIEQ +YNLP ++TH Y+ LL +R+NLSDTAIIVSTGPSL KQL LK+YA KATI AD++YPILAKHG+KPDYVLSLER+L T
CJH_06700 +1268463 TILLKGNDPKDALQGIEQLIYNLPVLLTHAPYQNLLKQRENLSDTAIIVSTGPSLAKQLDTLKQYANKATIIAADASYPILAKHGIKPDYVLSLERILST +1268760

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
S+FF+N+F +FDKD+ F+ THP+T K L+ NNRNF+L + FI YLKL FG F G SVA +AY L++ LKHKNIIFIGQDLAYA++G SHP E
CJH_06700 +1268763 SKFFDNNFGDFDKDILFITTHLTHPQTIKKLKNNNRNFLLSYKGSEFIYYLKLKQFGEFVEGHSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSHPSE +1269060

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
HI+G D K I+Y L+T AYGG+ +VYT+E WN+FR I E+ + + ++ YNCTEGGARIEG IEKPF CE LL +DL KPF K+E L +
CJH_06700 +1269063 HIYGNYDAVDKNKITYHLKTLAYGGKNMVYTKEAWNVFRGILEKHISQTKRLKLCTTYNCTEGGARIEGAIEKPFKELCETLLKEDLKKPFPKVEALNKD +1269360

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFS-KILS------DDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLN +600
KQ+E LLK+YYK+ KSIKHC+DFS K+L + F N+ I LNE ++ LN I++ID+ K KLED + M DLYEILGPLLTQFELNLARIYVLN
CJH_06700 +1269363 KQDELLLKSYYKIYKSIKHCKDFSDKLLKSYNHILESFSNLNLIS-NLNEGKKILNYLIQEIDKIKFKLEDGKNMLDLYEILGPLLTQFELNLARIYVLN +1269660

Cj..7_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGER +663
PKT ED++NKS+LW+KEH+EF ++VY +IKAQE ALI+NI PLE +L +R L K+ +++ +
CJH_06700 +1269663 PKTPEDSYNKSLLWVKEHIEFFDMVYEYIKAQEKALIENITPLENELTQRNLEKYKRKIKNAK +1269849

CjjRM3197_1335 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2238.00 bits: 969.21 e-value: 0.000000
length: 668 gaps: 10 id: 517 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
CJSA_1271 +1268710 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1269007

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
CJSA_1271 +1269010 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1269307

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ T
CJSA_1271 +1269310 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLT +1269607

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
CJSA_1271 +1269610 SEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1269907

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
CJSA_1271 +1269910 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1270207

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKE
CJSA_1271 +1270210 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKE +1270507

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +668
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
CJSA_1271 +1270510 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1270711

CjjRM3197_1335 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2236.00 bits: 968.35 e-value: 0.000000
length: 654 gaps: 8 id: 513 positives: 555 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
CJSA_1256 +1250980 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1251277

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
CJSA_1256 +1251280 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1251577

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ T
CJSA_1256 +1251580 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLT +1251877

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
CJSA_1256 +1251880 SEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1252177

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
CJSA_1256 +1252180 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1252477

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKE
CJSA_1256 +1252480 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKE +1252777

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJSA_1256 +1252780 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1252939

CjjRM3197_1335 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2263.00 bits: 980.00 e-value: 0.000000
length: 664 gaps: 16 id: 520 positives: 565 coverage: 0.80 query coverage 0.78

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
CJSA_1269 +1264901 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1265198

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
CJSA_1269 +1265201 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1265498

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
CJSA_1269 +1265501 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1265798

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF+EFDKD+ F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD+
CJSA_1269 +1265801 AEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDD +1266098

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLN
CJSA_1269 +1266101 YQNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLN +1266398

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
CJSA_1269 +1266401 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1266698

Cj..7_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
CJSA_1269 +1266701 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1266890

CjjRM3197_1335 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function family

Score: 2411.00 bits: 1043.84 e-value: 0.000000
length: 514 gaps: 0 id: 514 positives: 514 coverage: 1.07 query coverage 0.77

Cj..7_1335 +154 FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP +253
FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP
IC..1_1265 +1288417 FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP +1288714

Cj..7_1335 +254 SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL +353
SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL
IC..1_1265 +1288717 SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL +1289014

Cj..7_1335 +354 DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +453
DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL
IC..1_1265 +1289017 DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +1289314

Cj..7_1335 +454 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +553
DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE
IC..1_1265 +1289317 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +1289614

Cj..7_1335 +554 KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVE +653
KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE
IC..1_1265 +1289617 KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE +1289914

Cj..7_1335 +654 GERGTFFKKYSSFI +667
GERGTFFKKYSSFI
IC..1_1265 +1289917 GERGTFFKKYSSFI +1289956

CjjRM3197_1335 vs: ICDCCJ07001_1268 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 864bp / 288aa PV: No
Function: hypothetical protein

Score: 1187.00 bits: 515.85 e-value: 0.000000
length: 513 gaps: 17 id: 295 positives: 368 coverage: 1.02 query coverage 0.44

Cj..7_1335 +164 FFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLK +263
F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSLTKQLPLLK
IC..1_1268 +1292278 FLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLK +1292575

Cj..7_1335 +264 KYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMG +363
KYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D
IC..1_1268 +1292578 KYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGI +1292875

Cj..7_1335 +364 FSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYN +463
SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L +G +K E + +TAYGG+G V + WNLFR +FE + + +++ +YN
IC..1_1268 +1292878 VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENL---FTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYN +1293175

Cj..7_1335 +464 CTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEK +563
CTEGGARIEGTIEKPFLWACENLL KDL+KPF KL L N + +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+K
IC..1_1268 +1293178 CTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLN-LEYNSK-*IMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQK +1293475

Cj..7_1335 +564 IDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG +663
ID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
IC..1_1268 +1293478 IDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKN +1293775

Cj..7_1335 +664 ERG-TFFKKYSSF +676
F KK+ S+
IC..1_1268 +1293778 ANK*NF*KKFRSY +1293814

CjjRM3197_1335 vs: CJM1_1292 in M1 (Campylobacter jejuni subsp. jejuni M1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor

Score: 1644.00 bits: 712.98 e-value: 0.000000
length: 679 gaps: 28 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
CJM1_1292 +1256127 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1256424

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAEN +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
CJM1_1292 +1256427 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILST +1256724

Cj..7_1335 +201 FKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERV +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
CJM1_1292 +1256727 IKISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERD +1257024

Cj..7_1335 +301 LETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNS +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ S
CJM1_1292 +1257027 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +1257324

Cj..7_1335 +401 HPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEK +500
H + I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF K
CJM1_1292 +1257327 HAKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPK +1257624

Cj..7_1335 +501 LEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLAR +600
L PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLAR
CJM1_1292 +1257627 LNPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLAR +1257924

Cj..7_1335 +601 IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +679
IYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
CJM1_1292 +1257927 IYVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1258161

CjjRM3197_1335 vs: MTVDSCj20_1315 in MTVDSCj20 (Campylobacter jejuni subsp. jejuni strain MTVDSCj20, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1644.00 bits: 712.98 e-value: 0.000000
length: 679 gaps: 28 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
MT..0_1315 +1291224 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1291521

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAEN +200
LFKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
MT..0_1315 +1291524 LFKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILST +1291821

Cj..7_1335 +201 FKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERV +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
MT..0_1315 +1291824 IKISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERD +1292121

Cj..7_1335 +301 LETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNS +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ S
MT..0_1315 +1292124 DIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSS +1292421

Cj..7_1335 +401 HPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEK +500
H + I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF K
MT..0_1315 +1292424 HAKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPK +1292721

Cj..7_1335 +501 LEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLAR +600
L PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLAR
MT..0_1315 +1292724 LNPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLAR +1293021

Cj..7_1335 +601 IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +679
IYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
MT..0_1315 +1293024 IYVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1293258

CjjRM3197_1335 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD protein

Score: 2242.00 bits: 970.94 e-value: 0.000000
length: 664 gaps: 16 id: 514 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
ER.._01444 +1370964 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1371261

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAE FKY
ER.._01444 +1371264 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKY +1371561

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER T
ER.._01444 +1371564 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFT +1371861

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD++V F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD+
ER.._01444 +1371864 AEFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDD +1372161

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLN
ER.._01444 +1372164 YQNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1372461

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
ER.._01444 +1372464 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1372761

Cj..7_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
ER.._01444 +1372764 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1372953

CjjRM3197_1335 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2230.00 bits: 965.76 e-value: 0.000000
length: 668 gaps: 10 id: 516 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+
ER.._01446 +1374773 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGV +1375070

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
ER.._01446 +1375073 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1375370

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH +KPDYVLSLER+ T
ER.._01446 +1375373 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIPLT +1375670

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
ER.._01446 +1375673 SEFFNNDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1375970

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
ER.._01446 +1375973 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1376270

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKE
ER.._01446 +1376273 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKE +1376570

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +668
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
ER.._01446 +1376573 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1376774

CjjRM3197_1335 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 2182.00 bits: 945.06 e-value: 0.000000
length: 653 gaps: 8 id: 501 positives: 547 coverage: 0.77 query coverage 0.75

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+
ER.._01430 +1357049 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGV +1357346

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
ER.._01430 +1357349 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1357646

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH +KPDYV LER T
ER.._01430 +1357649 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSEFT +1357946

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD+D+ F+ HP +YL+ RN ++ Y+ L DF Y +GFSVAHM YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
ER.._01430 +1357949 AEFFNHDFGEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDD +1358246

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYG + V T+ +W LF+N FE ++ + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
ER.._01430 +1358249 YQNSA----NYESQMYEHILTKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1358546

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
ER.._01430 +1358549 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1358846

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
ER.._01430 +1358849 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1359005

CjjRM3197_1335 vs: A0W68_07165 in OD267 (Campylobacter jejuni strain OD267, complete genome.)
Gene length: 1229bp / 409aa PV: No
Function: hypothetical protein

Score: 474.00 bits: 208.28 e-value: 0.000000
length: 146 gaps: 9 id: 119 positives: 128 coverage: 0.82 query coverage 0.50

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
A0.._07165 +1337687 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1337984

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQ +146
LFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+
A0.._07165 +1337987 LFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILE +1338122

Score: 307.00 bits: 136.25 e-value: 0.000000
length: 69 gaps: 0 id: 62 positives: 64 coverage: 0.82 query coverage 0.50

Cj..7_1335 +167 FSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKEL +235
FSRIYFLEL+SHYYERFHEDILGLNKKLAENFK I+ GNDPLDALQGIEQFVYNLP MITHPSYKEL
A0.._07165 +1338103 FSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1338307

Score: 682.00 bits: 298.01 e-value: 0.000000
length: 208 gaps: 4 id: 154 positives: 176 coverage: 0.82 query coverage 0.50

Cj..7_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIE +556
+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLNKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+
A0.._07165 +1338307 LYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQ +1338604

Cj..7_1335 +557 KIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +656
ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A0.._07165 +1338607 DIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1338904

Cj..7_1335 +657 EGERGTFF +664
+FF
A0.._07165 +1338907 RR*EKSFF +1338928

CjjRM3197_1335 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factor

Score: 2311.00 bits: 1000.70 e-value: 0.000000
length: 666 gaps: 20 id: 529 positives: 574 coverage: 0.82 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLK+I+SSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
H730_07620 +1368465 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKD-----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1368762

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+L+TSSLDIE FSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
H730_07620 +1368765 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILETSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1369062

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER+ T
H730_07620 +1369065 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERIPLT +1369362

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-- +400
+EFFNNDF EFDKD+ FV+KS+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
H730_07620 +1369365 AEFFNNDFGEFDKDILFVIKSWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1369662

Cj..7_1335 +401 ----DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKL
H730_07620 +1369665 YKNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQN---TISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKL +1369962

Cj..7_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
EPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLY+IL L QFELNLARIYVLNP
H730_07620 +1369965 EPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNP +1370262

Cj..7_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +666
KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+KWMERV + FF
H730_07620 +1370265 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR*KRNFF +1370460

CjjRM3197_1335 vs: H730_07630 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: motility accessory factor

Score: 2204.00 bits: 954.55 e-value: 0.000000
length: 653 gaps: 12 id: 504 positives: 553 coverage: 0.78 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLK+I+SSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
H730_07630 +1372274 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKD-----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1372571

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
H730_07630 +1372574 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1372871

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGND D LQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER
H730_07630 +1372874 SIVSHGNDSADTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIV +1373171

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFNNDF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
H730_07630 +1373174 AEFFNNDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1373471

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ V T+ +W LF+ FE ++ + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
H730_07630 +1373474 YQNSA----NYESQMYEHILTKAYGGKEEVKTHAIWILFKKYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1373771

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
H730_07630 +1373774 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1374071

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+KWMERV
H730_07630 +1374074 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERV +1374230

CjjRM3197_1335 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factor

Score: 2221.00 bits: 961.88 e-value: 0.000000
length: 653 gaps: 18 id: 515 positives: 559 coverage: 0.81 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJE1524 +1416258 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1416555

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
CJE1524 +1416558 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1416855

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
CJE1524 +1416858 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1417155

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFNNDF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNII IGQDLAYA+NGNSHPD+
CJE1524 +1417158 AEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSHPDD +1417455

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
CJE1524 +1417458 YQNSA----NYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1417755

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
CJE1524 +1417758 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1418055

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJE1524 +1418058 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1418214

CjjRM3197_1335 vs: CJE1522 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: motility accessory factor

Score: 2194.00 bits: 950.23 e-value: 0.000000
length: 664 gaps: 13 id: 504 positives: 554 coverage: 0.77 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJE1522 +1412440 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1412737

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
CJE1522 +1412740 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1413037

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
CJE1522 +1413040 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1413337

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFNNDF EFDKD+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H
CJE1522 +1413340 AEFFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQG +1413637

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
I L E TTAYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
CJE1522 +1413640 FIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1413937

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
CJE1522 +1413940 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1414237

Cj..7_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
CJE1522 +1414240 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1414429

CjjRM3197_1335 vs: CjjRM1285_1333 in RM1285 (Campylobacter jejuni subsp. jejuni strain RM1285, complete genome.)
Gene length: 1968bp / 656aa PV: No
Function: motility accessory factor (function unknown)

Score: 1623.00 bits: 703.92 e-value: 0.000000
length: 662 gaps: 17 id: 390 positives: 478 coverage: 0.59 query coverage 0.58

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q +LFN+NI AL N +LKESLK+IKSSKFELILGKDNLDINLK+TS LY++ I EL +MLN YNDKYLLYPVLYFYGFGNGI
Cj..5_1333 +1294836 MKFNQNQIKLFNRNINALNNTVLKESLKQIKSSKFELILGKDNLDINLKNTS---------DNTFLYKNAIDELNSMLNIYNDKYLLYPVLYFYGFGNGI +1295133

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEK++EII IM H++DFS EL++ +L++L SL+ + + + CSS PFFQFSR YFLEL S YYE+ + IL LNK L E FK
Cj..5_1333 +1295136 LFKALLQNKNHQHIVVFEKELEIIKIMLHLMDFSQELKENKLIILDINSLEFQDYYDLCSSNPFFQFSRTYFLELSSDYYEKDKKYILKLNKDLIEKFKN +1295433

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+ +GND D LQGIEQ +YNLP MITH +Y++ L KR+NLSDTAIIVSTGPSLTKQLP+LKKYA KATI ADS+YPILAKH +KPDYV+SLER+L T
Cj..5_1333 +1295436 SILLYGNDSKDNLQGIEQLIYNLPKMITHTAYQDFLKKRENLSDTAIIVSTGPSLTKQLPILKKYANKATIISADSSYPILAKHDIKPDYVVSLERILLT +1295733

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-D +400
SEFFNN+F +FDKD+ F+ THP+T K L+KNNRNFMLV + F YLKL FG G SVA +AY L++ L+HKNIIFIGQDLAY+ +G SH D
Cj..5_1333 +1295736 SEFFNNNFGDFDKDILFITTHLTHPQTIKNLEKNNRNFMLVHRSSEFTTYLKLKKFGELCEGHSVANVAYGLAVFLRHKNIIFIGQDLAYSNDGFSHTKD +1296033

Cj..7_1335 +401 EHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+G + + +T AYGG G V + W LFR E+ + + + YNCTEGGARIEG IEKPF CE LL +L+K F K++PLS
Cj..5_1333 +1296036 YRNLNKHEGHYERDFGH-FRTIAYGGVGFVESSFYWSLFRFFLEKRIHEANQLELCNTYNCTEGGARIEGAIEKPFKKTCEALLKNNLNKNFPKIDPLSS +1296333

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLN------EKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLN +600
KQNE LLK YYK+ KSI HC++F K L + IQ + LN E +E LN I++ID+ K KLED + M DL EIL LL QFELNLARI+VLN
Cj..5_1333 +1296336 HKQNELLLKCYYKIIKSINHCKNFKKELLKSYNHIQESFSNLNLISNLDEGKEILNYLIQEIDKIKFKLEDRKNMLDLCEILKTLLVQFELNLARIFVLN +1296633

Cj..7_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGE +662
PKT ED++ KS+LW+KEH+EF +++Y HI+AQE ALIKNI+PLE +L +R L K+ ++ +
Cj..5_1333 +1296636 PKTSEDSYKKSLLWVKEHIEFFKMIYTHIEAQEKALIKNIIPLENELTQRNLEKYKRKINAK +1296819

CjjRM3197_1335 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD protein

Score: 2282.00 bits: 988.19 e-value: 0.000000
length: 653 gaps: 14 id: 525 positives: 566 coverage: 0.82 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
AX.._06575 +1262441 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKD-----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1262738

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AX.._06575 +1262741 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1263038

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
AX.._06575 +1263041 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1263338

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ FV HP +YL+ NR +++ Y F Y+KL F + SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD+
AX.._06575 +1263341 AEFFNHDFGEFDKDILFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDD +1263638

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
AX.._06575 +1263641 Y----QNSANYESQMYKHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1263938

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYL LN+KE DLNLAI KIDEFKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
AX.._06575 +1263941 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1264238

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AX.._06575 +1264241 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1264397

CjjRM3197_1335 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2215.00 bits: 959.29 e-value: 0.000000
length: 654 gaps: 18 id: 515 positives: 557 coverage: 0.80 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNI+ALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
AX.._06490 +1245620 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1245917

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AX.._06490 +1245920 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1246217

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ T
AX.._06490 +1246220 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1246517

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYA++G SH +
AX.._06490 +1246520 SEFFNNDFGEFDKDILFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKD +1246817

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
AX.._06490 +1246820 --YSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1247117

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYL LN+KE DLNLAI KIDEFKNKLED++QMQDLYEIL LL QFELNLARIYVLNPKTKE
AX.._06490 +1247120 LNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKE +1247417

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AX.._06490 +1247420 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1247579

CjjRM3197_1335 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2226.00 bits: 964.04 e-value: 0.000000
length: 668 gaps: 21 id: 517 positives: 563 coverage: 0.80 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNI+ALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
AX.._06565 +1258623 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1258920

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AX.._06565 +1258923 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1259220

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ T
AX.._06565 +1259223 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1259520

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYA++G SH +
AX.._06565 +1259523 SEFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSHTKD +1259820

Cj..7_1335 +401 HIFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEP +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEG IEKPFLWACENLL KDL+KPFEKLEP
AX.._06565 +1259823 --YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEP +1260120

Cj..7_1335 +501 LSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNL---AIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVL +600
LSLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +E+ L I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVL
AX.._06565 +1260123 LSLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVL +1260420

Cj..7_1335 +601 NPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +668
NPKTKEDAFNKSILWIKEHLEFMELVY HIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
AX.._06565 +1260423 NPKTKEDAFNKSILWIKEHLEFMELVYEHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +1260624

CjjRM3197_1335 vs: CjjRM3196_1337 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 131.00 bits: 60.33 e-value: 0.000000
length: 59 gaps: 0 id: 48 positives: 51 coverage: 0.65 query coverage 0.65

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..6_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1292082

Score: 1656.00 bits: 718.16 e-value: 0.000000
length: 618 gaps: 11 id: 385 positives: 461 coverage: 0.65 query coverage 0.65

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS L+++ T L+ SN
Cj..6_1337 +1292077 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSN +1292374

Cj..7_1335 +158 FC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSL +257
+ F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSL
Cj..6_1337 +1292377 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +1292674

Cj..7_1335 +258 TKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD +357
TKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L
Cj..6_1337 +1292677 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +1292974

Cj..7_1335 +358 -FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLD +457
F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L + +TAYGG+G V + WNLFR +FE + + +++
Cj..6_1337 +1292977 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +1293274

Cj..7_1335 +458 TKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLN +557
+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN
Cj..6_1337 +1293277 --IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +1293574

Cj..7_1335 +558 LAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWM +657
I+KID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++
Cj..6_1337 +1293577 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +1293874

Cj..7_1335 +658 ERVEGERG-TFFKKYSSF +675
ER++ F KK+ S+
Cj..6_1337 +1293877 ERIKNANK*NF*KKFRSY +1293928

CjjRM3197_1335 vs: CjjRM3196_1335 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 2001bp / 667aa PV: Yes
Function: hypothetical protein

Score: 3043.00 bits: 1316.46 e-value: 0.000000
length: 667 gaps: 1 id: 666 positives: 666 coverage: 1.00 query coverage 1.00

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
Cj..6_1335 +1288082 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1288379

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY
Cj..6_1335 +1288382 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +1288679

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET
Cj..6_1335 +1288682 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +1288979

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE
Cj..6_1335 +1288982 SEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +1289279

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN
Cj..6_1335 +1289282 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +1289579

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA
Cj..6_1335 +1289582 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +1289879

Cj..7_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFFKKYSSFI +667
FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVEGERGTFFKKYSSFI
Cj..6_1335 +1289882 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVEGERGTFFKKYSSFI +1290080

CjjRM3197_1335 vs: CjjRM3197_1337 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 131.00 bits: 60.33 e-value: 0.000000
length: 59 gaps: 0 id: 48 positives: 51 coverage: 0.65 query coverage 0.65

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..7_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1292082

Score: 1656.00 bits: 718.16 e-value: 0.000000
length: 618 gaps: 11 id: 385 positives: 461 coverage: 0.65 query coverage 0.65

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS L+++ T L+ SN
Cj..7_1337 +1292077 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSN +1292374

Cj..7_1335 +158 FC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSL +257
+ F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSL
Cj..7_1337 +1292377 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +1292674

Cj..7_1335 +258 TKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD +357
TKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L
Cj..7_1337 +1292677 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +1292974

Cj..7_1335 +358 -FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLD +457
F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L + +TAYGG+G V + WNLFR +FE + + +++
Cj..7_1337 +1292977 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +1293274

Cj..7_1335 +458 TKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLN +557
+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN
Cj..7_1337 +1293277 --IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +1293574

Cj..7_1335 +558 LAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWM +657
I+KID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++
Cj..7_1337 +1293577 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +1293874

Cj..7_1335 +658 ERVEGERG-TFFKKYSSF +675
ER++ F KK+ S+
Cj..7_1337 +1293877 ERIKNANK*NF*KKFRSY +1293928

CjjRM3197_1335 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation data

Score: 1106.00 bits: 480.91 e-value: 0.000000
length: 291 gaps: 9 id: 247 positives: 260 coverage: 0.80 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJS3_1430 +1321539 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1321836

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
CJS3_1430 +1321839 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1322136

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYV +291
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV
CJS3_1430 +1322139 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1322409

Score: 1073.00 bits: 466.67 e-value: 0.000000
length: 363 gaps: 9 id: 261 positives: 293 coverage: 0.80 query coverage 0.76

Cj..7_1335 +291 VLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAY +390
L LER T+EFFNNDF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNII IGQDLAY
CJS3_1430 +1322381 CLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAY +1322678

Cj..7_1335 +391 AKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDK +490
A+NGNSHPD++ A E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+K
CJS3_1430 +1322681 AENGNSHPDDYQNSA----NYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNK +1322978

Cj..7_1335 +491 PFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +590
PFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PL TQFELNLARI
CJS3_1430 +1322981 PFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARI +1323278

Cj..7_1335 +591 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJS3_1430 +1323281 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1323467

CjjRM3197_1335 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation data

Score: 1150.00 bits: 499.89 e-value: 0.000000
length: 291 gaps: 9 id: 255 positives: 267 coverage: 0.75 query coverage 0.73

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGI
CJS3_1427 +1317722 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGI +1318019

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
L+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
CJS3_1427 +1318022 LYKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1318319

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYV +291
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV
CJS3_1427 +1318322 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1318592

Score: 1045.00 bits: 454.59 e-value: 0.000000
length: 350 gaps: 4 id: 233 positives: 270 coverage: 0.75 query coverage 0.73

Cj..7_1335 +315 VWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETI +414
+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H I L E
CJS3_1427 +1318636 IVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERD +1318933

Cj..7_1335 +415 SYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVC +514
TTAYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV
CJS3_1427 +1318936 LDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1319233

Cj..7_1335 +515 KSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +614
+SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE
CJS3_1427 +1319236 QSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1319533

Cj..7_1335 +615 HLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
HLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
CJS3_1427 +1319536 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1319683

CjjRM3197_1335 vs: A0W69_07845 in WP2202 (Campylobacter jejuni strain WP2202, complete genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 2243.00 bits: 971.37 e-value: 0.000000
length: 661 gaps: 42 id: 487 positives: 537 coverage: 0.82 query coverage 0.73

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDIN--------LKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLY +100
MTF PTQKELFN + NL++ + + GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLY
A0.._07845 +1463497 MTFTPTQKELFNNQV---------------------------NLNLS*VKII*ISI*KIQV*KIMGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLY +1463794

Cj..7_1335 +101 FYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNK +200
FYGFGNGILFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNK
A0.._07845 +1463797 FYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNK +1464094

Cj..7_1335 +201 KLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVL +300
KLAENFK I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV
A0.._07845 +1464097 KLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVC +1464394

Cj..7_1335 +301 SLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAK +400
LER T+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+
A0.._07845 +1464397 MLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAE +1464694

Cj..7_1335 +401 NGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPF +500
NGNSHPD++ + E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPF
A0.._07845 +1464697 NGNSHPDDY----QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPF +1464994

Cj..7_1335 +501 EKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYV +600
EKLEPLSLNKQNEFLLKAYYKVCKSI+HCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYV
A0.._07845 +1464997 EKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYV +1465294

Cj..7_1335 +601 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +661
LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A0.._07845 +1465297 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1465477

CjjRM3197_1335 vs: QZ67_01453 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1512bp / 504aa PV: Yes
Function: hypothetical protein

Score: 1979.00 bits: 857.49 e-value: 0.000000
length: 663 gaps: 21 id: 481 positives: 531 coverage: 0.95 query coverage 0.72

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
QZ67_01453 +1322595 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1322892

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
QZ67_01453 +1322895 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1323192

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ T
QZ67_01453 +1323195 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLT +1323492

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
QZ67_01453 +1323495 SEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1323792

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
QZ67_01453 +1323795 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1324092

Cj..7_1335 +501 LNKQNEFLL-KAYYKVCKSI-KHCRDF---SK--ILSDDFENIQSIYLSLNEKEEDLNL-AIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIY +600
LNKQNEFLL AYYKV +S +F SK IL I +Y+ + K++ + + ++K K KLED++QMQDLY+IL L QFELNLARIY
QZ67_01453 +1324095 LNKQNEFLL*MAYYKVYQSY*AIVENF**NSK*MIL-----KIYKVYI*V*MKKKRISI*LLKK*MSLKTKLEDIKQMQDLYDILQSLFIQFELNLARIY +1324392

Cj..7_1335 +601 VLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVE +663
VLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
QZ67_01453 +1324395 VLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1324581

CjjRM3197_1335 vs: QZ67_01469 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 2151.00 bits: 931.68 e-value: 0.000000
length: 664 gaps: 16 id: 497 positives: 547 coverage: 0.77 query coverage 0.74

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+
QZ67_01469 +1336523 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGV +1336820

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
QZ67_01469 +1336823 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1337120

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKHG+KPDYV LER T
QZ67_01469 +1337123 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHGIKPDYVCMLERTEIT +1337420

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF+EFDKD+ F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD+
QZ67_01469 +1337423 AEFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDD +1337720

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLN
QZ67_01469 +1337723 YQNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLN +1338020

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
QZ67_01469 +1338023 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1338320

Cj..7_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
QZ67_01469 +1338323 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1338512

CjjRM3197_1335 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2238.00 bits: 969.21 e-value: 0.000000
length: 668 gaps: 10 id: 517 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+
QZ67_01471 +1340332 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGV +1340629

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK
QZ67_01471 +1340632 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKD +1340929

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SIISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ T
QZ67_01471 +1340932 SIISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLT +1341229

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
QZ67_01471 +1341232 SEFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1341529

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
QZ67_01471 +1341532 --YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1341829

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKE
QZ67_01471 +1341832 LNKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKE +1342129

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +668
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
QZ67_01471 +1342132 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1342333

CjjRM3197_1335 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 2281.00 bits: 987.76 e-value: 0.000000
length: 653 gaps: 8 id: 521 positives: 564 coverage: 0.80 query coverage 0.78

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKE FNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNGI
N149_1281 +1278070 MTFIPTQKEFFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGI +1278367

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N149_1281 +1278370 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLSTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1278667

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDP DALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N149_1281 +1278670 SIVSHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1278967

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
N149_1281 +1278970 AEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1279267

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
N149_1281 +1279270 YQNSA----NYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1279567

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVC+SI+HCRDFSKILS+DFE IQS+YLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
N149_1281 +1279570 NKQNEFLLKAYYKVCQSIEHCRDFSKILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1279867

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N149_1281 +1279870 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1280026

CjjRM3197_1335 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factor

Score: 2220.00 bits: 961.45 e-value: 0.000000
length: 654 gaps: 18 id: 512 positives: 556 coverage: 0.80 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F PTQKELFNKNIEALSNILLKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
N149_1298 +1294864 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +1295161

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N149_1298 +1295164 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1295461

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ T
N149_1298 +1295464 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1295761

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYA++G SH +
N149_1298 +1295764 SEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKD +1296061

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL+KDL+KPFEKLEPLS
N149_1298 +1296064 --YSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLS +1296361

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQS+YL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL LL QFELNLARIYVLNPKTKE
N149_1298 +1296364 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKE +1296661

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N149_1298 +1296664 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1296823

CjjRM3197_1335 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factor

Score: 2234.00 bits: 967.49 e-value: 0.000000
length: 665 gaps: 18 id: 513 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDK+LLYPVLYFYGFGNGI
N149_1296 +1291055 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGI +1291352

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N149_1296 +1291355 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1291652

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
N149_1296 +1291655 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1291952

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
N149_1296 +1291955 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1292252

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
N149_1296 +1292255 YQNSA----NYESQMYKHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1292552

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
N149_1296 +1292555 NKQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +1292852

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N149_1296 +1292855 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1293047

CjjRM3197_1335 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2207.00 bits: 955.84 e-value: 0.000000
length: 658 gaps: 26 id: 513 positives: 559 coverage: 0.80 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIE+LSNILLKESLKEI+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AB.._08255 +1558359 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1558656

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AB.._08255 +1558659 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1558956

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITH SYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ T
AB.._08255 +1558959 SIVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLT +1559256

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-- +400
SEFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYAK+G SH
AB.._08255 +1559259 SEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSHTKD +1559556

Cj..7_1335 +401 ----DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
D+H G +K + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKL
AB.._08255 +1559559 YKNLDKHE-GHFQRDKGK-----FQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKL +1559856

Cj..7_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
EPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YLSLNEKEED+NLAI+KIDEFKNKLE+++QMQDLYEIL PLL QFELNLA+IYVLNP
AB.._08255 +1559859 EPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNP +1560156

Cj..7_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +658
KTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AB.._08255 +1560159 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1560330

CjjRM3197_1335 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2226.00 bits: 964.04 e-value: 0.000000
length: 665 gaps: 18 id: 510 positives: 560 coverage: 0.79 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIE+LSNILLKESLKEI+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AB.._08325 +1571356 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1571653

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AB.._08325 +1571656 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +1571953

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITH SYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
AB.._08325 +1571956 SIVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1572253

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
AB.._08325 +1572256 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1572553

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
AB.._08325 +1572556 YQNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1572853

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
AB.._08325 +1572856 NKQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +1573153

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
AB.._08325 +1573156 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +1573348

CjjRM3197_1335 vs: AB430_08340 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 2116.00 bits: 916.59 e-value: 0.000000
length: 596 gaps: 7 id: 461 positives: 510 coverage: 0.78 query coverage 0.69

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+ L + ++
AB.._08340 +1575334 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +1575631

Cj..7_1335 +158 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +257
CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK SI+S+GNDPLDALQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSL K
AB.._08340 +1575634 LCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLIK +1575931

Cj..7_1335 +258 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +357
QLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F
AB.._08340 +1575934 QLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFC +1576231

Cj..7_1335 +358 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +457
Y +GFSVAH YL+ HL HKNIIFIGQDLAYA+NGNSHPD++ + E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + +
AB.._08340 +1576234 YAAVGFSVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDY----QNSANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGIT +1576531

Cj..7_1335 +458 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +557
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQS+YLSLNEKEED+NLAI+KID
AB.._08340 +1576534 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSVYLSLNEKEEDINLAIKKID +1576831

Cj..7_1335 +558 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
EFKNKLE+++QMQDLYEIL PLL QFELNLA+IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AB.._08340 +1576834 EFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1577119

CjjRM3197_1335 vs: VC76_06695 in FB1 (Campylobacter coli strain FB1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1608.00 bits: 697.45 e-value: 0.000000
length: 665 gaps: 21 id: 387 positives: 482 coverage: 0.59 query coverage 0.58

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F Q+E+F +NI AL N +L++ L++IK +KFEL+LG DNLDINL++T K+N LLY + I EL +ML YNDKYLLYPVLYFYGFGNGI
VC76_06695 +1299942 MNFTSNQQEIFKQNINALVNEILRKKLQKIKNTKFELLLGNDNLDINLRNT--KDN-------TLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGI +1300239

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNK HQHIV+FE DIEI+WIMFH+LDFS E++K ++++ T ++I+ + +KPF F RIYFLEL S YYE+ +DI +NK L E FK
VC76_06695 +1300242 LFKALLQNKHHQHIVIFENDIEILWIMFHLLDFSCEIKKNKIIIFDTNEINIKDYEMLTLTKPFISFLRIYFLELSSSYYEKMNKDIQKVNKNLMEYFKK +1300539

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
++I +GNDPLDALQGIEQFV+NLP M+TH SYKEL+ KRKNLS TAIIVSTGPSL KQLPLLKKY KATIFCADSAYPILAKH +KPDYV LER T
VC76_06695 +1300542 AMIGYGNDPLDALQGIEQFVHNLPKMLTHSSYKELIKKRKNLSKTAIIVSTGPSLIKQLPLLKKYQNKATIFCADSAYPILAKHNIKPDYVCMLERASLT +1300839

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DFK+FDKD+ F+ S HP YL+KNNR ++L+S + SF ++ D+GYFD SVAHM+Y ++ L HKNIIFIGQDLAYA+NG+SHP E
VC76_06695 +1300842 AEFFNHDFKDFDKDIVFICASLIHPNAITYLEKNNREYILISRFLSFALFIACHDYGYFDQSPSVAHMSYIIAAKLCHKNIIFIGQDLAYAENGDSHPQE +1301139

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ + I ++ YGG+ V T+ +W LF+ I EQ I Y YNCTEGGA IEGTIE+ F C+ LL DL+KPF KL+ +
VC76_06695 +1301142 Y---QNSSTFESNIYQKIECLGYGGKNSVKTHSIWLLFKQIIEQ---LILDYPYINTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIKLKKPNIQ +1301439

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSI-----YLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPK +600
KQNE +LK+Y K+ KSIKHC +F K E+I+S YLSL E +E L++ I+ ID FK KLE++ M D YEILGPLL QFELNLARIYVLNPK
VC76_06695 +1301442 KQNELMLKSYAKIYKSIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKEILDILIQIIDNFKTKLENV-NMVDFYEILGPLLMQFELNLARIYVLNPK +1301739

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
T ED+FNKS+LWIKEHLEF+ +VYGHI+AQE AL KNI+PLEE+LK+R K+++R++ +F
VC76_06695 +1301742 TLEDSFNKSVLWIKEHLEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIKNANK*YF +1301934

CjjRM3197_1335 vs: AR446_01555 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1908bp / 636aa PV: No
Function: PseE protein

Score: 1085.00 bits: 471.85 e-value: 0.000000
length: 712 gaps: 88 id: 324 positives: 411 coverage: 0.51 query coverage 0.49

Cj..7_1335 +11 FNKNIEALS----NillkeslkeiksskfelILGKDNLDINL-KDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKAL +110
FNKN++ALS N L K+ + +F GKDNLDIN+ K + +K +YQDPIKEL+ L + D + YPVL+FYGFGNGIL+K L
AR.._01555 +309557 FNKNLKALSGFEYNNLRKKLKDLKELREFTFTQGKDNLDINIIKKSNLKK----------MYQDPIKELEKDLEYFKD-FTRYPVLFFYGFGNGILYKIL +309854

Cj..7_1335 +111 LQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQ-----FSRIYFLELISHYYERFHEDILGLNKKLAENFKY +210
LQN+ + I++FEK++E+I + +DFS +L RL++L+ + N F+ F R Y L + +YE + EDIL LNK + K
AR.._01555 +309257 LQNQVLKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDI------NLPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKN +309554

Cj..7_1335 +211 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +310
+ HGNDP DALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER
AR.._01555 +308957 HNLMHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERDEIV +309254

Cj..7_1335 +311 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +410
+E FNNDF EFDKD+ F++ S H T YL+KN R ++L+ F YL+LD++GY + G SV+HMAY L+ L HKNII IGQDLAYAK+G +H
AR.._01555 +308657 AECFNNDFGEFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARYLELDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQG +308954

Cj..7_1335 +411 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +510
I L E TTAYGG G V + E+W LFR IFE + + +K YNCT+GGARIE IEKPF CE+LL DK F+KL+ L
AR.._01555 +308357 FIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIA----FSKSKTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTK +308654

Cj..7_1335 +511 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAI--EKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +610
+Q + LK Y K+ K + +F K + + +Q L + L L + ID+ K KL + + + L EILGP L + + L +Y+ + K
AR.._01555 +308057 EQVKLGLKIYQKIKKNMNLSLNFKK----ECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYL-FLQEILGPTLHHEQSILTPLYLKDIKDDS +308354

Cj..7_1335 +611 DAFNKSILWIKEH-------LEFMELVYGHIK-------------------------------------------AQESALIKNILPleeklkerklNKW +710
D NK WI H +E +E +K AQE ALIKNILPLEEKLKERKL+KW
AR.._01555 +307757 DKQNKLFAWIYAHESLMENIIELLEAQDKRLKIAILPLQDFLEKKKAL*KLRCIKASKKLLKKF*NILLNRISLCAQENALIKNILPLEEKLKERKLDKW +308054

Cj..7_1335 +711 MERVEGERGTFF +722
MERV +FF
AR.._01555 +307457 MERVRK*EKSFF +307490

CjjRM3197_1335 vs: AR446_01560 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1832bp / 610aa PV: No
Function: No annotation data

Score: 1809.00 bits: 784.16 e-value: 0.000000
length: 620 gaps: 59 id: 420 positives: 466 coverage: 0.69 query coverage 0.63

Cj..7_1335 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILD
AR.._01560 +311272 VLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILD----- +311569

Cj..7_1335 +138 QKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLA +237
FSN + DILGLNKKLAENFK SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+
AR.._01560 +310972 -----------------FSN------------------------ELQSDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLS +311269

Cj..7_1335 +238 KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRN +337
KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYV LER +E FNNDF EFDKD+ F++KS THPHT KYLQKNNR
AR.._01560 +310672 KRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRA +310969

Cj..7_1335 +338 FMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNL +437
F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H I L E TTAYGG G V + E+W L
AR.._01560 +310372 FILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTL +310669

Cj..7_1335 +438 FRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSI +537
FR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDF ++ I+
AR.._01560 +310072 FRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNS +310369

Cj..7_1335 +538 YLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNI +637
+ SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNI
AR.._01560 +309772 FTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNI +310069

Cj..7_1335 +638 LPleeklkerklNKWMERVE +657
LPLEEKLKERKL+KWMERV
AR.._01560 +309472 LPLEEKLKERKLDKWMERVR +309529

CjjRM3197_1335 vs: AR446_01545 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1228bp / 409aa PV: No
Function: No annotation data

Score: 859.00 bits: 374.36 e-value: 0.000000
length: 296 gaps: 55 id: 213 positives: 223 coverage: 0.85 query coverage 0.52

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
AR.._01545 +305646 MIFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +305943

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILD FSN + DILGLNKKLAENFK
AR.._01545 +305346 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILD----------------------FSN------------------------ELQSDILGLNKKLAENFKN +305643

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLER +296
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYV LER
AR.._01545 +305046 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLER +305331

Score: 321.00 bits: 142.28 e-value: 0.000000
length: 70 gaps: 0 id: 63 positives: 65 coverage: 0.85 query coverage 0.52

Cj..7_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKI +526
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDF I
AR.._01545 +304848 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNSI +305055

Score: 297.00 bits: 131.93 e-value: 0.000000
length: 75 gaps: 0 id: 72 positives: 74 coverage: 0.85 query coverage 0.52

Cj..7_1335 +578 LLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
+LTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AR.._01545 +304652 ILTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +304874

CjjRM3197_1335 vs: ATE51_00894 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1945bp / 648aa PV: Yes
Function: hypothetical protein

Score: 177.00 bits: 80.17 e-value: 0.000000
length: 59 gaps: 0 id: 58 positives: 58 coverage: 0.80 query coverage 0.78

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
AT.._00894 +455222 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +455396

Score: 2122.00 bits: 919.17 e-value: 0.000000
length: 596 gaps: 7 id: 462 positives: 508 coverage: 0.80 query coverage 0.78

Cj..7_1335 +58 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +157
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+ L + ++
AT.._00894 +455053 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +455350

Cj..7_1335 +158 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +257
CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAE FK SI+S+GNDPLDALQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSLTK
AT.._00894 +454753 LCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTK +455050

Cj..7_1335 +258 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +357
QLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F
AT.._00894 +454453 QLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFC +454750

Cj..7_1335 +358 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +457
Y +GFSVAH YL+ HL HKNIIFIGQDLAYA+NGNSHPD++ + E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + +
AT.._00894 +454153 YAAVGFSVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDY----QNSANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGIT +454450

Cj..7_1335 +458 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +557
YNCTEGGARIEGTIEKPFLWACENLL+KDL+KPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KID
AT.._00894 +453853 TYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKID +454150

Cj..7_1335 +558 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
EFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AT.._00894 +453553 EFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +453838

CjjRM3197_1335 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 2231.00 bits: 966.19 e-value: 0.000000
length: 665 gaps: 18 id: 513 positives: 561 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AT.._00898 +459031 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +459328

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AT.._00898 +458731 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +459028

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+ HGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
AT.._00898 +458431 SIVFHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +458728

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
AT.._00898 +458131 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +458428

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARI+GTIEKPFLWACENLL KDL+KPFEKLEPLSL
AT.._00898 +457831 YQNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +458128

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
AT.._00898 +457531 NKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +457828

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
AT.._00898 +457231 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +457423

CjjRM3197_1335 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical protein

Score: 2215.00 bits: 959.29 e-value: 0.000000
length: 654 gaps: 18 id: 510 positives: 557 coverage: 0.80 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F PTQKELFNKNIE+LSNILLKESLK+I+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
AT.._00928 +472027 MIFTPTQKELFNKNIESLSNILLKESLKQIQSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +472324

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
AT.._00928 +471727 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +472024

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ T
AT.._00928 +471427 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLT +471724

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYA++G SH +
AT.._00928 +471127 SEFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKD +471424

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
AT.._00928 +470827 --YSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +471124

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQS+YL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PLL QFELNLA+IYVLNPKTKE
AT.._00928 +470527 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKE +470824

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AT.._00928 +470227 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +470386

CjjRM3197_1335 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2249.00 bits: 973.96 e-value: 0.000000
length: 664 gaps: 16 id: 517 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
YSQ_02185 +448770 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +449067

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAE FKY
YSQ_02185 +448470 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKY +448767

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER T
YSQ_02185 +448170 SILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFT +448467

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD++V F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD+
YSQ_02185 +447870 AEFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDD +448167

Cj..7_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLN
YSQ_02185 +447570 YQNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLN +447867

Cj..7_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLA+IYVLNPKT
YSQ_02185 +447270 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYVLNPKT +447567

Cj..7_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
YSQ_02185 +446970 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +447159

CjjRM3197_1335 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD protein

Score: 2261.00 bits: 979.13 e-value: 0.000000
length: 653 gaps: 12 id: 520 positives: 564 coverage: 0.81 query coverage 0.78

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSQ_02175 +444961 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +445258

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
YSQ_02175 +444661 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +444958

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GND D LQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
YSQ_02175 +444361 SIVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +444658

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y + FSVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD+
YSQ_02175 +444061 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDD +444358

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
YSQ_02175 +443761 YQNSA----NYESQMYKHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +444058

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSIKHCRDFSKILS++FE IQS+YLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PLL QFELNLARIYVLNPKTKED
YSQ_02175 +443461 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKED +443758

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSQ_02175 +443161 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +443317

CjjRM3197_1335 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2296.00 bits: 994.23 e-value: 0.000000
length: 658 gaps: 16 id: 529 positives: 568 coverage: 0.81 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSQ_02255 +462692 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +462989

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
YSQ_02255 +462392 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +462689

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GND D LQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ T
YSQ_02255 +462092 SIVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +462389

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-- +400
SEFFNNDF EFD+DV FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
YSQ_02255 +461792 SEFFNNDFGEFDQDVLFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +462089

Cj..7_1335 +401 ----DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKL
YSQ_02255 +461492 YKNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQNT---ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKL +461789

Cj..7_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILS++FE IQS+YLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PLL QFELNLARIYVLNP
YSQ_02255 +461192 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNP +461489

Cj..7_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +658
KTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSQ_02255 +460892 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +461063

CjjRM3197_1335 vs: YSS_07230 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2232.00 bits: 966.62 e-value: 0.000000
length: 665 gaps: 18 id: 512 positives: 561 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
YSS_07230 +1351597 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +1351894

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
YSS_07230 +1351897 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1352194

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
YSS_07230 +1352197 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +1352494

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
YSS_07230 +1352497 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +1352794

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARI+GTIEKPFLWACENLL KDL+KPFEKLEPLSL
YSS_07230 +1352797 YQNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1353094

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
YSS_07230 +1353097 NKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +1353394

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
YSS_07230 +1353397 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1353589

CjjRM3197_1335 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical protein

Score: 1062.00 bits: 461.93 e-value: 0.000000
length: 637 gaps: 38 id: 296 positives: 382 coverage: 0.58 query coverage 0.44

Cj..7_1335 +11 FNKNIEALS----NillkeslkeiksskfelILGKDNLDINL-KDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKAL +110
FNKN++ALS N L K+ + +F GKDNLDIN+ K +K +YQDPIKEL+ L + D + YPVL+FYGFGNGIL+K L
YSS_07245 +1357367 FNKNLKALSGFEYNDLRKKLEDLKELREFTFTQGKDNLDINIIKKRNLKK----------MYQDPIKELEKNLEYFKD-FTRYPVLFFYGFGNGILYKIL +1357664

Cj..7_1335 +111 LQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQ-----FSRIYFLELISHYYERFHEDILGLNKKLAENFKY +210
LQN+ + I++FEK++E+I + +DFS +L RL++L+ + N F+ F R Y L + +YE + EDIL LNK + K
YSS_07245 +1357667 LQNQALKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDI------NLPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKN +1357964

Cj..7_1335 +211 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +310
+ GNDP DA+QGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER
YSS_07245 +1357967 HNLMRGNDPKDAMQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIV +1358264

Cj..7_1335 +311 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +410
+E FNNDFK+FDKD+ F++ S H T YL+KN R ++L+ F L LD++GY + G SV+HMAY L+ L HKNII IGQDLAYAK+G +H
YSS_07245 +1358267 AECFNNDFKDFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARCLGLDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQG +1358564

Cj..7_1335 +411 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +510
I L E TTAYGG G V + E+W LFR IFE + + +K YNCT+GGARIE IEKPF CE+LL DK F+KL+ L
YSS_07245 +1358567 FIHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIA----FSKSKTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTK +1358864

Cj..7_1335 +511 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAI--EKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +610
+Q + LK Y K+ K + +F K + + +Q L + L L + ID+ K KL + + + L EILGP L + + L +Y+ + K
YSS_07245 +1358867 EQVKLGLKIYQKIKKNMNLSLNFKK----ECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLF-LQEILGPTLHHEQSILTPLYLKDIKDDS +1359164

Cj..7_1335 +611 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILP +647
D NK WI H ME + ++AQ+ L ILP
YSS_07245 +1359167 DKQNKLFAWIYAHESLMENIIELLEAQDKRLKIAILP +1359275

CjjRM3197_1335 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2289.00 bits: 991.21 e-value: 0.000000
length: 654 gaps: 8 id: 526 positives: 566 coverage: 0.81 query coverage 0.79

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSS_07160 +1339246 MIFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1339543

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL+ L + + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
YSS_07160 +1339546 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNARLMVLENDKLQAQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1339843

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ T
YSS_07160 +1339846 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLT +1340143

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
SEFFNNDF EFDKD+ FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
YSS_07160 +1340146 SEFFNNDFGEFDKDILFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD +1340443

Cj..7_1335 +401 HIFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +500
+ LD + + Q AYGG G V + +W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLS
YSS_07160 +1340446 --YKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLS +1340743

Cj..7_1335 +501 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKE +600
LNKQNEFLLKAYYKVCKSIKHCRDF KILS+DFE IQSIYLSLNEKEED+NLAIEKIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKE
YSS_07160 +1340746 LNKQNEFLLKAYYKVCKSIKHCRDFNKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKE +1341043

Cj..7_1335 +601 DAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +654
DAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSS_07160 +1341046 DAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1341205

CjjRM3197_1335 vs: YSS_07240 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2252.00 bits: 975.25 e-value: 0.000000
length: 653 gaps: 8 id: 513 positives: 560 coverage: 0.79 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSS_07240 +1355406 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1355703

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
YSS_07240 +1355706 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1356003

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
YSS_07240 +1356006 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1356303

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
YSS_07240 +1356306 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1356603

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
YSS_07240 +1356606 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1356903

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIEKIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
YSS_07240 +1356906 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1357203

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSS_07240 +1357206 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1357362

CjjRM3197_1335 vs: YSU_02220 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1958bp / 652aa PV: No
Function: No annotation data

Score: 1160.00 bits: 504.20 e-value: 0.000000
length: 291 gaps: 9 id: 258 positives: 268 coverage: 0.75 query coverage 0.74

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
YSU_02220 +454840 MTFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +455137

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
YSU_02220 +454540 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +454837

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYV +291
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDY
YSU_02220 +454240 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYA +454510

Score: 1043.00 bits: 453.73 e-value: 0.000000
length: 350 gaps: 4 id: 233 positives: 269 coverage: 0.75 query coverage 0.74

Cj..7_1335 +315 VWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETI +414
+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H I L E
YSU_02220 +453929 IVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERD +454226

Cj..7_1335 +415 SYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVC +514
TTAYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV
YSU_02220 +453629 LDKFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +453926

Cj..7_1335 +515 KSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +614
+SIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE
YSU_02220 +453329 QSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +453626

Cj..7_1335 +615 HLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
HLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
YSU_02220 +453029 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +453176

CjjRM3197_1335 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2258.00 bits: 977.84 e-value: 0.000000
length: 653 gaps: 8 id: 517 positives: 561 coverage: 0.80 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
YSU_02270 +464985 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +465282

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAE FK
YSU_02270 +464685 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKN +464982

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSL KQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T
YSU_02270 +464385 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +464682

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFNNDF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
YSU_02270 +464085 AEFFNNDFGEFDKDIIFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +464382

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
YSU_02270 +463785 YQNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +464082

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
YSU_02270 +463485 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +463782

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHL+FMELVYGHIKAQESALIKNILPLEEKLKERKL+KWMERV
YSU_02270 +463185 AFNKSILWIKEHLKFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERV +463341

CjjRM3197_1335 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD protein

Score: 2235.00 bits: 967.92 e-value: 0.000000
length: 653 gaps: 18 id: 515 positives: 558 coverage: 0.81 query coverage 0.77

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
M F PTQKELFNKNIEALSNILLKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGI
YSU_02210 +451026 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS---------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGI +451323

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
YSU_02210 +450726 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKN +451023

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
YSU_02210 +450426 SIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +450723

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
YSU_02210 +450126 AEFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +450423

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ + E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
YSU_02210 +449826 Y----QNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +450123

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
YSU_02210 +449526 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +449823

Cj..7_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSU_02210 +449226 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +449382

CjjRM3197_1335 vs: A6K30_02235 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1766bp / 588aa PV: Yes
Function: PseD protein

Score: 1153.00 bits: 501.18 e-value: 0.000000
length: 264 gaps: 1 id: 235 positives: 247 coverage: 0.77 query coverage 0.68

Cj..7_1335 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
ILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS EL
A6.._02235 +453001 ILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSEL +453298

Cj..7_1335 +138 QKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLA +237
Q +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+
A6.._02235 +452701 QSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLS +452998

Cj..7_1335 +238 KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +301
KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ TS
A6.._02235 +452401 KRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +452590

Score: 904.00 bits: 393.77 e-value: 0.000000
length: 346 gaps: 24 id: 220 positives: 251 coverage: 0.77 query coverage 0.68

Cj..7_1335 +323 THPHTTKYLQKNNRNFML--VSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSL-----HLKHKNIIFI--------GQDLAYAKNGNSHPDEHIF-GAL +422
+P+T KYLQKN +L S +SFI + + F + M A Y ++ HL +KN F+ D Y K+ +HPD++ G
A6.._02235 +452144 VYPQTIKYLQKNKIEHILYYTSRPSSFIETISI--FAHMAM*VKWAKCCYNMAYEFDIRHLNYKNYSFL*DRI*LMQKMDFPYTKDYKTHPDDYQHEGHF +452441

Cj..7_1335 +423 DGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFL +522
+K E I Q AYGG G V + + + ++ Q+ I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFL
A6.._02235 +451844 QRDKGEHI----QCLAYGGNGKVESSGILDYVLDLSLQNT--ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +452141

Cj..7_1335 +523 LKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSIL +622
LKAYYKVCKSIKHCRDF KILS+DFE IQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSIL
A6.._02235 +451544 LKAYYKVCKSIKHCRDFNKILSNDFEKIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +451841

Cj..7_1335 +623 WIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +668
WIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A6.._02235 +451244 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +451379

CjjRM3197_1335 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2214.00 bits: 958.86 e-value: 0.000000
length: 665 gaps: 18 id: 509 positives: 558 coverage: 0.79 query coverage 0.76

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGI
A6.._02165 +440734 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS---------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGI +441031

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
A6.._02165 +440434 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +440731

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
A6.._02165 +440134 SIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEIT +440431

Cj..7_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD+
A6.._02165 +439834 AEFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDD +440131

Cj..7_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
A6.._02165 +439534 YQNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +439831

Cj..7_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKV +SIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
A6.._02165 +439234 NKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +439531

Cj..7_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KW ERV +FF
A6.._02165 +438934 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWTERVRR*EKSFF +439126

CjjRM3197_1335 vs: A6K30_02155 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1977bp / 659aa PV: Yes
Function: PseD protein

Score: 1181.00 bits: 513.26 e-value: 0.000000
length: 292 gaps: 1 id: 260 positives: 273 coverage: 0.74 query coverage 0.73

Cj..7_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG Y ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
A6.._02155 +436925 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG-YNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +437222

Cj..7_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
A6.._02155 +436625 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +436922

Cj..7_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVL +292
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVL
A6.._02155 +436325 IILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVL +436598

Score: 141.00 bits: 64.64 e-value: 0.000000
length: 123 gaps: 13 id: 46 positives: 68 coverage: 0.74 query coverage 0.73

Cj..7_1335 +315 VWFVLKSYTHPHTTKYLQ-----KNNRNFMLVSTYASFIN--YLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALD +414
+ F+ HP +YL+ N + ML+S + + +L + G + ++++A YLS HKNIIFIGQDLAYA+NGNSHPD++ A +
A6.._02155 +435985 IVFICAGVVHPKAIEYLKG*KFSHNSKSSMLLSILYTILKI*FLCML*HGLKCCTYDLSYLATYLS----HKNIIFIGQDLAYAENGNSHPDDYQNSA-N +436282

Cj..7_1335 +415 GEKKETISYDLQ-TTAYGGEGLV +437
E+ I ++ TAYGG G V
A6.._02155 +435685 YERHFQIDMNIF*RTAYGGNGKV +435751

Score: 536.00 bits: 235.03 e-value: 0.000000
length: 127 gaps: 0 id: 110 positives: 118 coverage: 0.74 query coverage 0.73

Cj..7_1335 +454 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +553
D YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIE
A6.._02155 +435555 DITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIE +435852

Cj..7_1335 +554 KIDEFKNKLEDMEQMQDLYEILGPLLT +580
KIDEFKNKLE+++QMQDLYEIL PL T
A6.._02155 +435255 KIDEFKNKLENIKQMQDLYEILQPLRT +435333

Score: 287.00 bits: 127.62 e-value: 0.000000
length: 72 gaps: 0 id: 70 positives: 71 coverage: 0.74 query coverage 0.73

Cj..7_1335 +581 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A6.._02155 +435173 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +435386

CjjRM3197_1335 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factor

Score: 1551.00 bits: 672.86 e-value: 0.000000
length: 628 gaps: 20 id: 357 positives: 448 coverage: 0.56 query coverage 0.53

Cj..7_1335 +10 LFNKNIEALSNillkeslkeiksskfelIL-GKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQN +109
+F KNI+AL N LK+ L +I+ I+ GKDNLDINL +T L+Y++ ++EL MLN Y +KY LYPVLYFYGFGNGIL+KALLQN
CINS_1188 +1147940 MFAKNIQALLNPHLKQKLLQIQKQNKFQIIQGKDNLDINLLNTQ---------DNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALLQN +1148237

Cj..7_1335 +110 KNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGND +209
+NH+HI+VFE D+E+I+ MF+ILDFS EL+++RL+++ T L + CS P F FSR YFLEL S YYE++++D+L +N L FK SI SHGN
CINS_1188 +1147640 QNHKHIIVFENDLELIYAMFQILDFSKELEEARLVIIDTNDLKRRDYDYLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSIFSHGNS +1147937

Cj..7_1335 +210 PLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndf +309
P+D LQGIEQFVYN+PSMI+ PSYKELL KRKNLSDTAIIVSTGPSL KQLPLLK+Y+SKATIFCADSAYPILAK+ +KPDYV LER+ T+EFFNNDF
CINS_1188 +1147340 PIDVLQGIEQFVYNIPSMISNPSYKELLNKRKNLSDTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAEFFNNDF +1147637

Cj..7_1335 +310 kefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDG +409
EFDKD+ FVLKS HP KYL+K +++S + FIN++ L + GY G SVA MAY L+ L HKNIIFIGQDLAYA+NG+SHP ++ A
CINS_1188 +1147040 GEFDKDIVFVLKSVVHPNAFKYLEKKQTKIVVISENSHFINFIDLQNLGYAYSGPSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDYQNSA--- +1147337

Cj..7_1335 +410 EKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLL +509
E+ +Y+ + T AYGG +V T+ +W LF+N E+ + + + + YNCTEGGARIEG IEKPF CE LL K+L KPF KL+ L +NKQNE LL
CINS_1188 +1146740 -TFESDTYEHIDTLAYGGGYMVKTHFIWLLFKNEMEKLISRNE---NCATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQNELLL +1147037

Cj..7_1335 +510 KAYYKVCKSIKHCRDFSKILSDDFENIQSIY--LSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSI +609
KAY K+ +SIK C D K + + + + L E LN I +D+ K K+E+ + M DLYEILGP + QFELNLARIYVLNPKTKED+FNKS+
CINS_1188 +1146440 KAYCKINQSIKKCVDLKKDFQKELDSLNKMMNDFLLSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTKEDSFNKSV +1146737

Cj..7_1335 +610 LWIKEHLEFMELVYGHIKAQESALIKNI +637
LWIKEHLE ++L+ HI AQ+ LIKNI
CINS_1188 +1146140 LWIKEHLEWIQLIIAHINAQKLGLIKNI +1146221

CjjRM3197_1335 vs: CONCH_0163 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 1911bp / 637aa PV: Yes
Function: motility accessory factor

Score: 1393.00 bits: 604.71 e-value: 0.000000
length: 641 gaps: 40 id: 354 positives: 432 coverage: 0.56 query coverage 0.53

Cj..7_1335 +4 IPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFK +103
I QK +FNKN++AL NI LKE+LK+IK F+ I GKD LDIN I N GGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+K
CONCH_0163 +145116 ITMQKHIFNKNLKALNNIKLKETLKKIKILNFKTIQGKDPLDINF----IHN--GGGYT---LYNNTLNELDEKLKLYNDKYLLYPVLYFYGFGNGILYK +145413

Cj..7_1335 +104 ALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +203
ALLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E
CONCH_0163 +144816 ALLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHI +145113

Cj..7_1335 +204 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +303
K I+S GN DALQGIE FVYNLP +I+ S+ ELL KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADSAYPILAK+ +KPDYVLSLERV+
CONCH_0163 +144516 KQIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVV +144813

Cj..7_1335 +304 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP +403
ETSEFFNNDF EF+KD+ F+L H T +L NN + + + F YL L FG SVA MAY+L+L L KNIIFIGQDLAYA +G SHP
CONCH_0163 +144216 ETSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHP +144513

Cj..7_1335 +404 DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLS +503
+E+ +G D + I Y L T AY G V T E W LF+ + E + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L
CONCH_0163 +143916 EEYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAKLEKLN +144213

Cj..7_1335 +504 LNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLS-----LNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLN +603
NKQ E +LK++YK+ + IK C K + IYLS L E++ I+++D FKNK E++ L E+L PL TQFELNLARIYVLN
CONCH_0163 +143616 ENKQKELMLKSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKF---EKINFLNELLNPLNTQFELNLARIYVLN +143913

Cj..7_1335 +604 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNIL +644
PKTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
CONCH_0163 +143316 PKTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +143436

CjjRM3197_1335 vs: CSUB8521_0178 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1394.00 bits: 605.14 e-value: 0.000000
length: 631 gaps: 16 id: 338 positives: 420 coverage: 0.53 query coverage 0.51

Cj..7_1335 +4 IPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFK +103
I K +F KN +AL N LKE L K F+++ G D LDIN I N GGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+K
CS..1_0178 +160071 IKMNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINF----IHN--GGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYK +160368

Cj..7_1335 +104 ALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSII +203
ALLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+
CS..1_0178 +159771 ALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTIL +160068

Cj..7_1335 +204 SHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSef +303
+ GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV ETSEF
CS..1_0178 +159471 TKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEF +159768

Cj..7_1335 +304 fnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIF +403
FNNDF +FDKD+ FVL S HP T YL+KN R FM V S Y L F Y SVA MAY++++ L +K+IIFIGQDLAYA +G SHP E+ +
CS..1_0178 +159171 FNNDFGKFDKDIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHY +159468

Cj..7_1335 +404 GALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQN +503
G D + I Y L+ +YGG + T W +F+ E+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
CS..1_0178 +158871 GKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQI +159168

Cj..7_1335 +504 EFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNK +603
E +LK++YK K+IK C + L + I L E + IE++D FK K+ + E + L ++ L TQFELNLARIYVLNPK KEDAFNK
CS..1_0178 +158571 ELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINN-ELI--LRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +158868

Cj..7_1335 +604 SILWIKEHLEFMELVYGHIKAQESALIKNIL +634
++LWIKEHLE + ++ H KA + L KNI+
CS..1_0178 +158271 TLLWIKEHLEWILMLNDHSKALKITLEKNII +158361

CjjRM3197_1335 vs: CSUB8521_0235 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1926bp / 642aa PV: Yes
Function: putative motility accessory factor

Score: 1463.00 bits: 634.90 e-value: 0.000000
length: 650 gaps: 19 id: 361 positives: 445 coverage: 0.56 query coverage 0.54

Cj..7_1335 +5 PTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKA +104
P QK LF KN +AL N LKE L K F+++ G D LDIN I N GGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KA
CS..1_0235 +207307 PMQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF----IHN--GGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKA +207604

Cj..7_1335 +105 LLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIIS +204
LLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S
CS..1_0235 +207007 LLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILS +207304

Cj..7_1335 +205 HGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeff +304
GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV TSEFF
CS..1_0235 +206707 KGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEFF +207004

Cj..7_1335 +305 nndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIF +404
NNDF +FDKD+ FVLKS HP T KYL+K + + +S F YL L DFGY +MG SVA MAY L+L L+HKNIIFIGQDLAYAK+G SHP E+ +
CS..1_0235 +206407 NNDFGDFDKDIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHY +206704

Cj..7_1335 +405 GALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQN +504
G D + I Y L YGG V T E W LF+ E + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ
CS..1_0235 +206107 GKYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEELLTKKLKKPFVKLEKLNQNKQK +206404

Cj..7_1335 +505 EFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNK +604
E +LKA+YKV K IK C IL + I L E + IE++D FK K +E++ L E++ PL TQFELNLARIYVLNPKTKEDAFNK
CS..1_0235 +205807 ELMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSK---IEKILILKELIDPLNTQFELNLARIYVLNPKTKEDAFNK +206104

Cj..7_1335 +605 SILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVE +654
++LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L +++++++
CS..1_0235 +205507 TLLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +205654

CjjRM3197_1335 vs: CSUB8523_1511 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1923bp / 641aa PV: Yes
Function: putative motility accessory factor

Score: 1402.00 bits: 608.59 e-value: 0.000000
length: 604 gaps: 28 id: 331 positives: 419 coverage: 0.52 query coverage 0.50

Cj..7_1335 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
+ G DNLDIN+ D GGGY LY P++EL LN YNDKYLLYPVL+FYGFGNGIL+KALLQN NH+ I+VFE D+ II+ MF ++DFS EL
CS..3_1511 +1479944 VQGDDNLDINIID-------GGGYR---LYDKPLEELNKTLNLYNDKYLLYPVLFFYGFGNGILYKALLQNLNHKIILVFEPDVNIIYTMFKMIDFSKEL +1480241

Cj..7_1335 +138 QKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYE-RFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELL +237
++ RL++L +I N F F R YFLE+ YY+ +++E+IL LN + + K IIS G+DPLD LQGI++F+ N+P MI PSYKELL
CS..3_1511 +1479644 KENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDDKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIANPSYKELL +1479941

Cj..7_1335 +238 AKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNR +337
KRKNLS+TAIIVSTGPSLTKQL LLK+Y KA+IFCADSAYPILAK +KPDYV SLER TSEFFN DF EFDKD+ FV+KS THP T KYL+KN R
CS..3_1511 +1479344 NKRKNLSETAIIVSTGPSLTKQLSLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNHDFGEFDKDILFVIKSVTHPNTIKYLEKNKR +1479641

Cj..7_1335 +338 NFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVW +437
+M+VST F Y L+DFGYF+MG SVAHMA YLS+HLKH NIIFIGQDLAY G SHP ++ + ET +Y+ + YGG G V T++ W
CS..3_1511 +1479044 KYMIVSTPEYFFKYCSLNDFGYFNMGWSVAHMACYLSVHLKHSNIIFIGQDLAYNDIGESHPKDY----QNSSTFETDTYEHIDVLGYGGIGYVKTHKTW +1479341

Cj..7_1335 +438 NLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQ +537
F+ I E D+ K ++ K+YNCTEGGARI GTIE+PF CE LL KDL+KPF KLE L LNKQNE LLKAY+K+ KSI++ + K L + I
CS..3_1511 +1478744 IFFKKILENDILTFNK-MNIKIYNCTEGGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSIRQYENLKKELCERNISIN +1479041

Cj..7_1335 +538 SIYLSLNEKEEDLNLAIEK-IDEFKNKLEDMEQMQ-DLYE---ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALI +637
L ++ NL I+ I F+ L+ ++ ++ +Y + GPL+ QFELNLARIYVLNPKT+ED++NKS+LWIKEHL+ ++L+ HI +Q+ L
CS..3_1511 +1478444 KNLLHID------NLDIQNSIHMFEFILKQIDAIKTSIYRCGLLNGPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQ +1478741

Cj..7_1335 +638 KNIL +641
+ ++
CS..3_1511 +1478144 RSVV +1478153

CjjRM3197_1335 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1399.00 bits: 607.30 e-value: 0.000000
length: 631 gaps: 16 id: 339 positives: 421 coverage: 0.53 query coverage 0.51

Cj..7_1335 +4 IPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFK +103
I K +F KNI+AL N LKE L K F+++ G D LDIN I N GGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+K
CS..3_0172 +155459 IKMNKNIFEKNIQALQNTKLKEKLLHFKQRNFQILQGNDPLDINF----IHN--GGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYK +155756

Cj..7_1335 +104 ALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSII +203
ALLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+
CS..3_0172 +155159 ALLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTIL +155456

Cj..7_1335 +204 SHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSef +303
+ GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV ETSEF
CS..3_0172 +154859 TKGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEF +155156

Cj..7_1335 +304 fnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIF +403
FNNDF +FDKD+ FVL S HP T YL+KN R FM V S Y L F Y SVA MAY++++ L +K+IIFIGQDLAYA +G SHP E+ +
CS..3_0172 +154559 FNNDFGDFDKDIVFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHY +154856

Cj..7_1335 +404 GALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQN +503
G D + I Y L+ +YGG + T W +F+ E+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ
CS..3_0172 +154259 GKYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQI +154556

Cj..7_1335 +504 EFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNK +603
E +LK++YK K+IK C + L + I L E + IE++D FK K+ + E + L ++ L TQFELNLARIYVLNPK KEDAFNK
CS..3_0172 +153959 ELMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINN-ELI--LRSVIDSLNTQFELNLARIYVLNPKAKEDAFNK +154256

Cj..7_1335 +604 SILWIKEHLEFMELVYGHIKAQESALIKNIL +634
++LWIKEHLE + ++ H KA + L KNI+
CS..3_0172 +153659 TLLWIKEHLEWILMLNDHSKALKITLEKNII +153749

CjjRM3197_1335 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factor

Score: 1550.00 bits: 672.43 e-value: 0.000000
length: 630 gaps: 16 id: 366 positives: 447 coverage: 0.57 query coverage 0.55

Cj..7_1335 +5 PTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKA +104
P QK LF KNI+AL N+ LKE L+ K F++I+G D LDIN I N GGGY LY+D + +L LN YNDKYLLYPVLYFYGFGNGIL+KA
CVOL_0220 +187971 PMQKALFEKNIQALQNVKLKEKLQNFKKNNFKVIVGNDALDINF----IHN--GGGYR---LYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYKA +188268

Cj..7_1335 +105 LLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIIS +204
LLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL T ++I + CS PFF F R+YFL++ YYE+++EDIL N + K SI
CVOL_0220 +187671 LLQNKNRQKIVVFEKELEFIYLSFHYIDFSEELKNGALIVLDTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLHIKRSIYR +187968

Cj..7_1335 +205 HGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeff +304
+GND D+L GIE F+YNLP +I+ S+K+L KRK LSD AIIVSTGPSL KQLPLLK+Y A+IFCADSAYPILAK G+KPDYVLSLERV ETSEFF
CVOL_0220 +187371 YGNDSQDSLMGIENFIYNLPKIISNYSFKQLCLKRKKLSDMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERVKETSEFF +187668

Cj..7_1335 +305 nndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFG +404
NNDFKE DKDV FVLKS THP T +YL NNR + + Y F ++ L DFGY +MG SVA MAY+L+LHL+HKNIIFIGQDLAYAK+G SHP E+ +G
CVOL_0220 +187071 NNDFKELDKDVLFVLKSLTHPNTFQYLNANNRKIIPATYYTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGSSHPKEYYYG +187368

Cj..7_1335 +405 ALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNE +504
D + ISY L T AYGG+ V+T E+W LF+ E+ V + YL+T YNCTEGGARI+GTIEKPF CE LL K L+KPF KLE L NKQ E
CVOL_0220 +186771 QYDTYDPKDISYHLTTIAYGGQDKVFTNEIWMLFKTQIEEAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKLEKLNQNKQKE +187068

Cj..7_1335 +505 FLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKS +604
+LKA+YKV K+IK C K + + I+LS +EK + IE++D FK K+ E++ L E++ PL TQFELNLARIYVLNPKTKEDAFNK+
CVOL_0220 +186471 LMLKAFYKVYKAIKICNTLEKECLHLYNTL--IFLSNDEK--NFKNVIEQLDYFKSKI---EKILILKELINPLNTQFELNLARIYVLNPKTKEDAFNKT +186768

Cj..7_1335 +605 ILWIKEHLEFMELVYGHIKAQESALIKNIL +634
+LWIKEHLE + ++ HIKA + L KNI+
CVOL_0220 +186171 LLWIKEHLEWILMLKDHIKALKITLEKNII +186258

CjjRM3197_1335 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factor

Score: 1519.00 bits: 659.06 e-value: 0.000000
length: 608 gaps: 27 id: 349 positives: 428 coverage: 0.55 query coverage 0.52

Cj..7_1335 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
I G DNLDINL +T L+Y++P++EL ML YN+KY LYPVLYFYGFGNGIL+KALLQNK H+ I+VFEKD+EII MF I+DFS EL
CVOL_1306 +1273458 IQGNDNLDINLLNTQ---------DNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIVFEKDLEIIHTMFSIIDFSKEL +1273755

Cj..7_1335 +138 QKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLA +237
Q+ RL++ T L+I + C +P F+R YFLEL S YYER+H+DIL +N +AE K +++ +GN PLDALQGIEQF +NLP MI+ P+YKELL
CVOL_1306 +1273758 QEFRLVIADTNCLNILDYEIMCRQQPMLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGIEQFTHNLPKMISCPTYKELLR +1274055

Cj..7_1335 +238 KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRN +337
KRKN DTAIIVSTGPSL+KQL LLK+YA KATIFCADSAYPILAK+ +KPDYVLSLERV TSEFFNNDF +FDKD+ F+LKSY + T KYL+KNNR
CVOL_1306 +1274058 KRKNSNDTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDIIFILKSYIYKNTIKYLEKNNRK +1274355

Cj..7_1335 +338 FMLV-STYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISY-----DLQTTAYGGEGLVYT +437
+ML+ ST A FI + +L ++GY G SVA M L+ L HKNII IGQDLAY+ +G SH +E+ + L K+ Y + AYGGEG V +
CVOL_1306 +1274358 YMLISSTDAKFIFFTQLHNYGYLATGCSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTY--LTDAYKDNKIYKRDYGKYECIAYGGEGKVQS +1274655

Cj..7_1335 +438 QEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKI----L +537
VW LFR FE D+ + Y DT VYNCTEGGARI G IEKPF CE LL K +K F LE LSLNKQNE +LKAY K+ KSI HC++ +K L
CVOL_1306 +1274658 SFVWTLFRQTFESDIALFKHY-DTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLKAYTKIKKSIVHCQELTKTFQEYL +1274955

Cj..7_1335 +538 SDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQES +637
S+ EN Q I ++DLN I IDE K ++ED + + +LYE+L PLL QFELNLARIYVLNP ++D +NKS+LWIKEH+ +EL+ HIKAQE
CVOL_1306 +1274958 SNLNENCQNIC-----SQKDLNYIINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNKSLLWIKEHISWLELIIAHIKAQEK +1275255

Cj..7_1335 +638 ALIKNILP +645
AL NI+P
CVOL_1306 +1275258 ALNDNIIP +1275279

CjjRM3197_1335 vs: CVOL_1208 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation data

Score: 873.00 bits: 380.40 e-value: 0.000000
length: 337 gaps: 11 id: 203 positives: 245 coverage: 0.52 query coverage 0.50

Cj..7_1335 +38 ILGKDNLDINLKDTSIKNNGGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNEL +137
I G DNLDIN+ D GGGY LY P++EL LN YNDKYLLYP L+FYGFGNGIL+KALLQN NH+ I+VFE D+ II+ MF ++DFS EL
CVOL_1208 +1175752 IQGNDNLDINIID-------GGGYK---LYDKPLEELNKTLNLYNDKYLLYPALFFYGFGNGILYKALLQNPNHKIILVFEPDVNIIYTMFKVIDFSQEL +1176049

Cj..7_1335 +138 QKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYE-RFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELL +237
++ RL++L +I N F F R YFLE+ YY+ +++E+IL LN + + K IIS G+DPLD LQGI++F+ N+P MI HPSYKELL
CVOL_1208 +1175452 KENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDGKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIAHPSYKELL +1175749

Cj..7_1335 +238 AKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNR +337
KRKNLSDTAIIVSTGPSLTKQLPLLK+Y KA+IFCADSAYPILAK +KPDYV SLER TSEFFNNDF EFDKD+ FV+KS THP T KYL+KN R
CVOL_1208 +1175152 NKRKNLSDTAIIVSTGPSLTKQLPLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNNDFGEFDKDILFVIKSVTHPNTIKYLEKNKR +1175449

Cj..7_1335 +338 NFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLS +374
+M+VST F Y L+DFGYF+MG SVAH+ ++
CVOL_1208 +1174852 KYMIVSTPEYFFKYCSLNDFGYFNMGWSVAHILLFIG +1174960

Score: 542.00 bits: 237.62 e-value: 0.000000
length: 277 gaps: 17 id: 129 positives: 175 coverage: 0.52 query coverage 0.50

Cj..7_1335 +364 SVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTE +463
V ++ YLS+HLKH NIIFIGQDLAY G SHP ++ + ET +Y+ + YGG G V T++ W F+ I E D+ K ++ K+YNCTE
CVOL_1208 +1174803 GVLPISCYLSVHLKHGNIIFIGQDLAYNDIGESHPKDY----QNSSTFETDTYEHIDVLGYGGIGHVKTHKTWIFFKKILENDILTFNK-MNIKIYNCTE +1175100

Cj..7_1335 +464 GGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED-----LNLAIEKIDE +563
GGARI GTIE+PF CE LL KDL+KPF KLE L LNKQNE LLKAY+K+ KS+++ + K L + I L ++ + L +++IDE
CVOL_1208 +1174503 GGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSVRQYENLKKELCERNISINKNLLHIDNLDIQNSIHIFELILKQIDE +1174800

Cj..7_1335 +564 FKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNIL +640
K + + GPL+ QFELNLARIYVLNPKT+ED++NKS+LWIKEHL+ ++L+ HI +Q+ L + I+
CVOL_1208 +1174203 IKTSIYRCGLLN------GPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSIV +1174431