Gene group 29

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
29lgrAformyl transferase domain protein212129
CJ..6_1325
PJ17_06920
JJ..7_0414
C8J_1241
RC25_06185
CJ..m_1280
IC..1_1253
CJM1_1280
MT..0_1304
ER.._01419
ER.._01420
CJE1498
Cj..6_1322
Cj..7_1322
CJS3_1403
N149_1269
G157_02280
VC76_06560
AR.._01620
YSQ_02320
YSU_02350
A6.._02295
CHL_1689
CI..E_0401
CI..3_0350
UP..0_1290
Cla_1312
UP..2_1306
CVOL_1294

Annotated functions

Function#Occuringscore
formyl transferase domain protein73.62
formyl transferase domain-containing protein13.50
formyl transferase33.14
formyltransferase domain-containing protein51.57
Linear gramicidin synthase subunit A10.50
No annotation data40.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CJ..6_1325
PJ17_06920
JJ..7_0414
IC..1_1253
CJE1498
Cj..6_1322
Cj..7_1322
CJS3_1403
N149_1269
G157_02280
VC76_06560
AR.._01620
YSQ_02320
YSU_02350
A6.._02295
CHL_1689
CI..E_0401
CI..3_0350
UP..0_1290
UP..2_1306
1
CVOL_1294

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CJ..6_1325
PJ17_06920
JJ..7_0414
IC..1_1253
CJE1498
Cj..6_1322
Cj..7_1322
CJS3_1403
N149_1269
G157_02280
VC76_06560
AR.._01620
YSQ_02320
YSU_02350
A6.._02295
CHL_1689
CI..E_0401
CI..3_0350
UP..0_1290
UP..2_1306
1
CVOL_1294

81-176

81-176 : CJJ81176_1325 [tract entry] [top]

Function: formyl transferase domain protein
+0 MVEESIDTGAILTQKEIKLDDNFTALSLLDTQHKLAIASFKEALKNLENKIFKIQTLGGGYHKKLALPNEGYLDLTWDKEKISRFLRAMDCGALIGVPKA
+100 RLKILGEEKEILFYEINELDLILNLSDNTILKITKE

[show detailed alignment]

00-1597

00-1597 : PJ17_06920 [tract entry] [top]

Function: formyl transferase
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKAFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

269.97

269.97 : JJD26997_0414 [tract entry] [top]

Function: No annotation data
+0 MKKFENIYIIGTGKVVKECQKIASDFFKQEVNFVKNIENLDNFFKNLKNCFIISANNSYIFKKECVQNNTIINYHNALLPFHRGCNARIWSIWENDKKTG
+100 ITWHMVEESIDTGEILIQKEIKLNDNFTALNLLDAQHKLAIASFKEAIENLKNKISKTQISAGGGYHKKLALPNKGYLDLTWDKEKISRFLRAMDCGALS
+200 EIPKARLKILGEEKEILLYEINEFDLILNLSDNTILKITKE

[show detailed alignment]

ICDCCJ07001

ICDCCJ07001 : ICDCCJ07001_1253 [tract entry] [top]

Function: formyl transferase domain protein
+0 MTYSHIYIIGTGKVTKKCQKIASDFFKQEVIFAKNIENLDDFCKNLKNCLIISANNSYIFKKECVQNNTIINYHNALLPFHKGCNARIWSIWENDKKTGI
+100 TWHMVEESIDTGAILTQKEIKLDDNFTALSLLDTQHKLAIASFKEALKNLENKIFKIQTLGGGYHKKLALPNEGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLKILGEEKEILFYEINELDLILNLSDNTILKITKE

[show detailed alignment]

RM1221

RM1221 : CJE1498 [tract entry] [top]

Function: formyl transferase domain protein
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKTFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

RM3196

RM3196 : CjjRM3196_1322 [tract entry] [top]

Function: formyl transferase domain protein
+0 MTYSHIYIIGTGKVTKKCQKIASDFFKQEVIFAKNIENLDDFCKNLKNCLIISANNSYIFKKECVQNNTIINYHNALLPFHKGCNARIWSIWENDKKTGI
+100 TWHMVEESIDTGAILTQKEIKLDDNFTALSLLDTQHKLAIASFKEALKNLENKIFKIQTLGGGYHKKLALPNEGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLKILGEEKEILFYEINELDLILNLSDNTILKITKE

[show detailed alignment]

RM3197

RM3197 : CjjRM3197_1322 [tract entry] [top]

Function: formyl transferase domain protein
+0 MTYSHIYIIGTGKVTKKCQKIASDFFKQEVIFAKNIENLDDFCKNLKNCLIISANNSYIFKKECVQNNTIINYHNALLPFHKGCNARIWSIWENDKKTGI
+100 TWHMVEESIDTGAILTQKEIKLDDNFTALSLLDTQHKLAIASFKEALKNLENKIFKIQTLGGGYHKKLALPNEGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLKILGEEKEILFYEINELDLILNLSDNTILKITKE

[show detailed alignment]

S3

S3 : CJS3_1403 [tract entry] [top]

Function: formyl transferase domain protein
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKTFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

15-537360

15-537360 : N149_1269 [tract entry] [top]

Function: formyl transferase domain protein
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKAFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

CVM N29710

CVM N29710 : G157_02280 [tract entry] [top]

Function: formyl transferase domain-containing protein
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKAFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

FB1

FB1 : VC76_06560 [tract entry] [top]

Function: Linear gramicidin synthase subunit A
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKAFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

HC2-48

HC2-48 : AR446_01620 [tract entry] [top]

Function: No annotation data
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKNRY
+100 YLAYG

No BLAST hits


RM1875

RM1875 : YSQ_02320 [tract entry] [top]

Function: formyl transferase
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKAFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

RM5611

RM5611 : YSU_02350 [tract entry] [top]

Function: No annotation data
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKNRY
+100 YLAYG

No BLAST hits


YH501

YH501 : A6K30_02295 [tract entry] [top]

Function: formyl transferase
+0 MTYSYIYIIGTGKVAKECQKIANDFFRQEVNFVKNIENLDDFFKNLKNCLIISANNFYIFKKECIQKNTIINYHNALLPFHRGCNAHIWSIWENDKKTGI
+100 TWHMVKESIDTGDILVQKEIKLDNNCTALSLLNAQHKLALTLFREALEILKNKAFKMQISGGGYHKKLSLPNNGYLDLTWNKEKISRFLRAMDCGALSGV
+200 PKARLEILGEEREILFYEINELDLILNLSDNVILKITKE

[show detailed alignment]

CCUG 27631

CCUG 27631 : CHL_1689 [tract entry] [top]

Function: formyltransferase domain-containing protein
+0 MRFKNVFVVGKGRVALECAKIARSKFKNVELLNLDNIQDKDMFFNKLKNAFIISANNFYIFKKVCVENNYIINYHNSLLPSHRGLNAHIWSIWSGDTISG
+100 ISWHEVQSTIDTGRVLIQKEIAIKDMSANELLLAQHKAAIFAFDELLNSGFKTKVAYTSAAGGGELHKRYELPNAGVLEVSWEFKKLVRFLKAFDVGVFR
+200 EIPYPKVSVLGDFMDILYYEIGDGLINLSLENGRKLNIIKEQK

[show detailed alignment]

1485E

1485E : CIG1485E_0401 [tract entry] [top]

Function: formyltransferase domain-containing protein
+0 MEFKNVFVVGKGRVALECAKIARSKFKNVELLNLDDMQDKDAFFNELKNTFIISANNFYIFKSQCVLNNFIINYHNSLLPSHRGMNAHIWSIWSGDTKSG
+100 ISWHEVENTIDTGRILIQKEIAIEDMSAKELLLAQHKAAIFAFDELLNSGFDAKFKVIHTSWGGGELHKRCELPNAGVLDLSWEFQKLVRFLKAFDVGVF
+200 RKIPYPKVSVLGGFVDILYYEIGDGFVNLSLENGQKLNIIKEQK

[show detailed alignment]

RM11343

RM11343 : CIG11343_0350 [tract entry] [top]

Function: formyltransferase domain-containing protein
+0 MEFKNVFVVGKGRVALECAKIARSKFKNVEVLNLDNIQDKDIFFNELKNTFIVSANNFYIFKKVCVENNYIINYHNSLLPSHRGVNAHIWSIWSGDTKSG
+100 ISWHEVESTIDTGRILIQKEIAIKDMSAKELLLAQHKAAIFAFDELLNSGFDAKFKVIHTSAGGGELHKRCELPNAGVLDLSWEFQKLVRFLKAFDVGVF
+200 REIPYPKVSVLGGFVDILYYEIGDGFVNLSLGNDQKLNIIKEQK

[show detailed alignment]

CCUG 22395

CCUG 22395 : UPTC4110_1290 [tract entry] [top]

Function: formyltransferase domain-containing protein
+0 MNFNQIIIIGKGKVAINCHKIICDTFLSKKIFFYNCDFKDDEFFNRISNSLIISANNAYIFKKKCIQNNIIINYHNSLLPKYKGRNAHIWTIWNQESITG
+100 ITWHKVDCAIDTGDIILQKEIKINNSLTAIKLLQIQQNLAINSFRECLANIKKSYPQPKINSISIGGGIYKMKELPNNGLLDITWDIQTIERFLRAMDNG
+200 NLTPKAKIKINDIVYDISFYEINHLEIILFLSNNMKIIFQKKEHNATNTRIF

[show detailed alignment]

RM16712

RM16712 : UPTC16712_1306 [tract entry] [top]

Function: formyltransferase domain-containing protein
+0 MNFNQIIIIGKGKVAINCHKIICDTFSSKKIFFYNCDFKDDEFFNRISNSLIISANNAYIFKKKCIQNNIIINYHNSLLPKYKGRNAHIWTIWNQENITG
+100 ITWHKVDCAIDTGDIILQKEIKINNSLTAIKLLQIQQNLAINSFRECLANIKKSYPQPKINSVSMGGGIYKMKELPNNGLLNITWDIQTIERFLKAMDNG
+200 NLTPKAKIKINDIVYDISFYEINHLEIILFLSNNMKIVFHKKEHNATNTRIF

[show detailed alignment]

LMG 24379

LMG 24379 : CVOL_1294 [tract entry] [top]

Function: No annotation data
+0 MNFKEIYLLGDGKVAKECLKITECFF

No BLAST hits