CCON33237_1104 vs: CFF04554_1119 in 04/554 (Campylobacter fetus subsp. fetus 04/554, complete genome.)
Gene length: 1572bp / 524aa PV: No
Function: terminase domain protein

Score: 1584.00 bits: 687.10 e-value: 0.000000
length: 524 gaps: 3 id: 330 positives: 410 coverage: 0.63 query coverage 0.63

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+EC+NLLKSGVS++ +++Q VSRPTL KWL+ E FS+D+ + KK++E LSK + P L++L+ AL K+E K K K
CF..4_1119 +1120210 VTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQ-TPQGVVMLSELVSALAKLENGVKKVKSIKDK +1120507

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ DALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CF..4_1119 +1120510 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSTDALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +1120807

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPN K+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CF..4_1119 +1120810 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNSKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +1121107

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CF..4_1119 +1121110 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +1121407

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CF..4_1119 +1121410 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +1121707

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA I V +K GGA+I+
CF..4_1119 +1121710 WALALALSHIGVVRAKKSGGAIII +1121779

CCON33237_1104 vs: CFF8240_0649 in 82-40 (Campylobacter fetus subsp. fetus 82-40, complete genome.)
Gene length: 1572bp / 524aa PV: No
Function: hypothetical protein

Score: 1595.00 bits: 691.85 e-value: 0.000000
length: 524 gaps: 3 id: 332 positives: 412 coverage: 0.63 query coverage 0.63

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+EC+NLLKSGVS++ +++Q VSRPTL KWL+ E FS+D+ + KK++E LSK + P L++L+ AL K+E K K K
CF..0_0649 +660394 VTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQ-TPQGVVMLSELVSALAKLENGVKKVKSIKDK +660691

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CF..0_0649 +660094 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +660391

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CF..0_0649 +659794 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +660091

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CF..0_0649 +659494 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +659791

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CF..0_0649 +659194 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +659491

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA I V +K GGA+I+
CF..0_0649 +658894 WALALALSHIGVVRAKKSGGAIII +658963

CCON33237_1104 vs: CSG_5840 in 84-112 (Campylobacter fetus subsp. venerealis str. 84-112, complete genome.)
Gene length: 1572bp / 524aa PV: No
Function: Mobile element protein

Score: 1598.00 bits: 693.14 e-value: 0.000000
length: 524 gaps: 3 id: 332 positives: 413 coverage: 0.63 query coverage 0.63

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+EC+NLLKSGVS++ +++Q VSRPTL KWL+ E FS+D+ + KK++E LSK + P L++L+ AL K+E K K K
CSG_5840 +585305 VTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQ-TPQGVVMLSELVSALAKLENGVKKVKSIKDK +585602

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CSG_5840 +585005 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +585302

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CSG_5840 +584705 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +585002

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CSG_5840 +584405 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +584702

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CSG_5840 +584105 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +584402

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA + V +KGGGA+I+
CSG_5840 +583805 WALALALSHVSVVKAKKGGGALII +583874

CCON33237_1104 vs: CSG_7270 in 84-112 (Campylobacter fetus subsp. venerealis str. 84-112, complete genome.)
Gene length: 1575bp / 525aa PV: No
Function: Mobile element protein

Score: 1607.00 bits: 697.02 e-value: 0.000000
length: 524 gaps: 2 id: 334 positives: 413 coverage: 0.64 query coverage 0.64

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+ECIN LKSGVS++ +SKQ VSRPTL KWL+ E FS+++ +K K+++E LSKK D+ L++LI AL K+E K K K
CSG_7270 +740276 VTYTKEFKEECINFLKSGVSALALSKQTGVSRPTLAKWLKTYEKENFSIENAIKFTKQKIEELSKKASPTSDDVVMLSELISALAKLENGVKKVKSIKDK +740573

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CSG_7270 +740576 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +740873

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CSG_7270 +740876 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +741173

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CSG_7270 +741176 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +741473

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CSG_7270 +741476 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +741773

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA + V +K GGA+I+
CSG_7270 +741776 WALALALSHVSVVKAKKSGGAIII +741845

CCON33237_1104 vs: CSG_13130 in 84-112 (Campylobacter fetus subsp. venerealis str. 84-112, complete genome.)
Gene length: 1575bp / 525aa PV: No
Function: Mobile element protein

Score: 1607.00 bits: 697.02 e-value: 0.000000
length: 524 gaps: 2 id: 334 positives: 413 coverage: 0.64 query coverage 0.64

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+ECIN LKSGVS++ +SKQ VSRPTL KWL+ E FS+++ +K K+++E LSKK D+ L++LI AL K+E K K K
CSG_13130 +1277813 VTYTKEFKEECINFLKSGVSALALSKQTGVSRPTLAKWLKTYEKENFSIENAIKFTKQKIEELSKKASPTSDDVVMLSELISALAKLENGVKKVKSIKDK +1278110

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CSG_13130 +1277513 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +1277810

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CSG_13130 +1277213 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +1277510

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CSG_13130 +1276913 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +1277210

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CSG_13130 +1276613 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +1276910

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA + V +K GGA+I+
CSG_13130 +1276313 WALALALSHVSVVKAKKSGGAIII +1276382

CCON33237_1104 vs: CFV97608_1317 in 97/608 (Campylobacter fetus subsp. venerealis 97/608.)
Gene length: 1572bp / 524aa PV: No
Function: terminase domain protein

Score: 1595.00 bits: 691.85 e-value: 0.000000
length: 524 gaps: 3 id: 332 positives: 412 coverage: 0.63 query coverage 0.63

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+EC+NLLKSGVS++ +++Q VSRPTL KWL+ E FS+D+ + KK++E LSK + P L++L+ AL K+E K K K
CF..8_1317 +1283862 VTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQ-TPQGVVMLSELVSALAKLENGVKKVKSIKDK +1284159

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CF..8_1317 +1283562 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +1283859

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CF..8_1317 +1283262 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +1283559

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CF..8_1317 +1282962 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +1283259

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CF..8_1317 +1282662 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +1282959

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA I V +K GGA+I+
CF..8_1317 +1282362 WALALALSHIGVVRAKKSGGAIII +1282431

CCON33237_1104 vs: CFV97608_0749 in 97/608 (Campylobacter fetus subsp. venerealis 97/608.)
Gene length: 1572bp / 524aa PV: No
Function: terminase domain protein

Score: 1595.00 bits: 691.85 e-value: 0.000000
length: 524 gaps: 3 id: 332 positives: 412 coverage: 0.63 query coverage 0.63

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+EC+NLLKSGVS++ +++Q VSRPTL KWL+ E FS+D+ + KK++E LSK + P L++L+ AL K+E K K K
CF..8_0749 +744451 VTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQ-TPQGVVMLSELVSALAKLENGVKKVKSIKDK +744748

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CF..8_0749 +744751 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +745048

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CF..8_0749 +745051 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +745348

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CF..8_0749 +745351 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +745648

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH KFKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CF..8_0749 +745651 TSFLKTYPISVLKIDKTGIGMNLAENMHDKFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +745948

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA I V +K GGA+I+
CF..8_0749 +745951 WALALALSHIGVVRAKKSGGAIII +746020

CCON33237_1104 vs: CFV97608_0486 in 97/608 (Campylobacter fetus subsp. venerealis 97/608.)
Gene length: 1572bp / 524aa PV: No
Function: terminase domain protein

Score: 1595.00 bits: 691.85 e-value: 0.000000
length: 524 gaps: 3 id: 331 positives: 413 coverage: 0.63 query coverage 0.63

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaY +100
+ Y +EFK+EC+NLLKSGVS++ +++Q VSRPTL KWL+ E FS+D+ + KK++E LSK + P L++L+ AL K+E K K K
CF..8_0486 +465453 VTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEKENFSIDNAINFTKKKIEELSKNDQ-TPQGVVMLSELVSALAKLENGVKKVKSIKDK +465750

CC..7_1104 +101 VLPPVSLDK-SAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDS +200
P + +D +A L+ I++ G L+AYQKEFLQS+ FRIVLKSRQIGFSYV++ADALIGAV GR+QLFLSASEEQALILMRY++ W+ +G++ KDS
CF..8_0486 +465753 SRPIINMDSPTANELKKRILEHGNLYAYQKEFLQSNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEYGISFKKDS +466050

CC..7_1104 +201 ETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLE +300
E E+ LENGA IK+ A NFRTVQGF GDIWMDEFAWYPNPK+IWHAFVPSIGA+KGRLTILSTPFEE+SLFH++Y D+ K+ MFKRF V IY+A+ DGL+
CF..8_0486 +466053 EHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPSIGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLD +466350

CC..7_1104 +301 FDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYTLAMLNVLAKASFKEQEDVL +400
FDLETM+ LFD DTWASAYEC F+DDESSLLSI+LIKSC+D K YF+P S + GYD+GRVSDRSTLA V+ + Y A++++LAKA F+EQ++ L
CF..8_0486 +466353 FDLETMRDLFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSDRSTLAGVVLENGVYKTALMDILAKARFEEQKEHL +466650

CC..7_1104 +401 SSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRF +500
+S L++YP++ L +DKTGIG+NL E MH +FKSRV GV+F+ KE+MALNLKK FEDK I IPNDPLLI+D+HAIKRT G KSFKYDAKRNEYGHADRF
CF..8_0486 +466653 TSFLKTYPISVLKIDKTGIGMNLAENMHDQFKSRVSGVWFSNTRKEEMALNLKKAFEDKLIKIPNDPLLIADIHAIKRTIGAKSFKYDAKRNEYGHADRF +466950

CC..7_1104 +501 WALALACRKIEAVVKRKGGGAVIL +524
WALALA + V +KGGGA+I+
CF..8_0486 +466953 WALALALSHVSVVKAKKGGGALII +467022

CCON33237_1104 vs: CFVI03293_1066 in cfvi03/293 (Campylobacter fetus subsp. venerealis cfvi03/293, complete genome.)
Gene length: 1668bp / 556aa PV: No
Function: terminase domain protein

Score: 1450.00 bits: 629.30 e-value: 0.000000
length: 521 gaps: 38 id: 324 positives: 384 coverage: 0.58 query coverage 0.62

CC..7_1104 +1 MAYNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDE-FSLDDGVKALKKQVECLSKKKKLV----------------------PDETAQLA +100
+ Y +EFK+EC+NLLKSGVS++ ++KQ VSRPTL KW + E S+++ +K K+++E LSKK + D+ L+
CF..3_1066 +1089395 VTYTKEFKEECVNLLKSGVSALALAKQTGVSRPTLAKWQKDHQKESLSIENAIKFTKQKIEELSKKININQGHPTSGALIERGASGLASSDNSDDVVMLS +1089692

CC..7_1104 +101 DLIVALNkieskskaakeqkaYVLPPVSLDKS-AKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQA +200
+LI AL K+E K K K P + L A L+ I++ G L+ YQKEFLQSD FRIVLKSRQIGFSYV++ADALIGAV GRNQLFLSASEEQA
CF..3_1066 +1089695 ELISALAKLENGVKKIKSIKDKPRPMLNLSSPVASELKKRILEKGNLYGYQKEFLQSDDSFRIVLKSRQIGFSYVSSADALIGAVAGRNQLFLSASEEQA +1089992

CC..7_1104 +201 LILMRYLKLWSDRFGVALAKDSETEIKLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDE +300
LILMRYL+ W+ FGV AKDSE EI L NGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGA+KGRLTILSTPFEE+SLFHELY DE
CF..3_1066 +1089995 LILMRYLRKWASEFGVEFAKDSEHEITLPNGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAIKGRLTILSTPFEERSLFHELYSDE +1090292

CC..7_1104 +301 QKYKMFKRFHVDIYRAMGDGLEFDLETMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDD +400
KY MFKRF V IY A+ DGL+FDLETM+ LFDADTWASAYEC F+DDESSLLSI LIKSC+ +K SY++P SN + GYDIGRVSDRSTLA V+ D
CF..3_1066 +1090295 SKYYMFKRFCVSIYSAIEDGLDFDLETMRNLFDADTWASAYECQFVDDESSLLSIALIKSCVYDKASYYTPKSNQVIYAGYDIGRVSDRSTLAGVVLEDV +1090592

CC..7_1104 +401 T--------------YTLAMLNVLAKASFKEQEDVLSSHLRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIP +500
T Y +AM++VLAKA F EQ++ L+S L++YPL+ L +DKTGIG+NL E +H KF+SRV GV+F+ KE+MALNLKK FEDK ISIP
CF..3_1066 +1090595 TNRARGQRSLSQGGRYIVAMMDVLAKAKFDEQKEHLTSFLKTYPLSVLKIDKTGIGMNLAENIHDKFRSRVSGVWFSNTRKEEMALNLKKAFEDKLISIP +1090892

CC..7_1104 +501 NDPLLISDLHAIKRTAGTKSF +521
NDPLLI+D+HAIKRT G KS
CF..3_1066 +1090895 NDPLLIADIHAIKRTIGAKSL +1090955

CCON33237_1104 vs: CGRAC_0605 in ATCC 33236 (Campylobacter gracilis strain ATCC 33236, complete genome.)
Gene length: 1557bp / 519aa PV: No
Function: terminase ATPase subunit

Score: 1328.00 bits: 576.67 e-value: 0.000000
length: 520 gaps: 4 id: 290 positives: 368 coverage: 0.56 query coverage 0.55

CC..7_1104 +3 YNEEFKKECINllksgvssvlvskQMNVSRPTLQKWLEQANDEFSLDDGVKALKKQVECLSKKKKLVPDETAQLADLIVALNkieskskaakeqkaYVLP +102
Y ++ K+ +NLL SG ++ ++K V T+ +W ++ +E ++ LK Q+ LSK K + Q+A L +L +++ ++ K P
CGRAC_0605 +575025 YSKKTKELILNLLHSGYAASELAKSYGVNAATIARWRKKGAEEGGAMT-IQNLKAQIATLSKGKS-SDSKAKQIAMLTASLSRLQGAKAKEQKVKNKKKP +575322

CC..7_1104 +103 PVSLDKSAKILRDEIVKDGELFAYQKEFLQSDAQFRIVLKSRQIGFSYVAAADALIGAVGGRNQLFLSASEEQALILMRYLKLWSDRFGVALAKDSETEI +202
++ + + L++ +K GELF YQK+FL +QFRIVLKSRQIGFSYV++ DAL+GAV GRNQLFLSASEEQA ILM Y ++W+ + GV+ AKDSE E
CGRAC_0605 +574725 IALMNGAYESLKEIALKSGELFDYQKDFLNDASQFRIVLKSRQIGFSYVSSLDALLGAVAGRNQLFLSASEEQARILMNYSQMWAKKLGVSFAKDSEYEK +575022

CC..7_1104 +203 KLENGAIIKALAHNFRTVQGFTGDIWMDEFAWYPNPKKIWHAFVPSIGAVKGRLTILSTPFEEKSLFHELYFDEQKYKMFKRFHVDIYRAMGDGLEFDLE +302
L+NGA I+ +AHNFRTVQGFTGDIWMDEFAWYPN K+IWHAFVPSIGAV GRLTILSTPFEE S F EL+ DE K+ MF R VDIYRAM GL+FDLE
CGRAC_0605 +574425 SLDNGATIRVMAHNFRTVQGFTGDIWMDEFAWYPNQKRIWHAFVPSIGAVAGRLTILSTPFEENSFFAELFGDELKFYMFSRHRVDIYRAMAGGLKFDLE +574722

CC..7_1104 +303 TMKALFDADTWASAYECVFIDDESSLLSITLIKSCIDEKLSYFSPNSNTPLLCGYDIGRVSDRSTLASVINSDDTYT-LAMLNVLAKASFKEQEDVLSSH +402
TM+ALFDADTWASAYEC F+DDES+LL I LIKSC+ + P N P+ GYD+GR DRS V ++ + L + +V+AKASF+ QE++L+
CGRAC_0605 +574125 TMRALFDADTWASAYECQFVDDESALLGIDLIKSCVSDFTPTLPPK-NIPVFSGYDVGRTKDRSVHMGVYDAGEGIKRLCLYDVIAKASFEAQENLLTDF +574422

CC..7_1104 +403 LRSYPLATLDMDKTGIGLNLTETMHAKFKSRVNGVYFTAGTKEQMALNLKKLFEDKKISIPNDPLLISDLHAIKRTAGTKSFKYDAKRNEYGHADRFWAL +502
LR LA L +DKTGIG+ + E + ++F SRV GVYFTA KE +ALNLKK FEDK ISIPNDPLLI+DLHAIKR AG KSF YD+ RNE+GHADRFWAL
CGRAC_0605 +573825 LRLNLLAYLKIDKTGIGMPVAERLKSRFTSRVSGVYFTASVKEALALNLKKHFEDKSISIPNDPLLIADLHAIKRKAGQKSFLYDSDRNEHGHADRFWAL +574122

CC..7_1104 +503 ALACRKIEAVVKRKGGGAVI +522
ALA E V +R+ +I
CGRAC_0605 +573525 ALALSYFEKVRERRNKAYII +573582