Strain name: RM16701
Filepath: ../polyG/campy.new\241851-744820081.gb
Species: C. lari
Created: 2018-09-09 12:25:37 (W. Europe Summer Time)
TractNo | Contig | Location | Tract | On length | Gene Group | Offset from gene | Gene | Length | Function | NCTC 11168 | 81-176 | PT14 | 00-0949 | 00-1597 | 00-2425 | 00-2426 | 00-2538 | 00-2544 | 00-6200 | 01-1512 | 269.97 | 4031 | 32488 | 35925B2 | 81116; NCTC 11828 | CG8421 | CJ677CC519 | CJM1cam | F38011 | IA3902 | ICDCCJ07001 | M1 | MTVDSCj20 | NCTC11351 | OD267 | R14 | RM1221 | RM1285 | RM3194 | RM3196 | RM3197 | S3 | WP2202 | YH001 | 15-537360 | BFR-CA-9557 | CVM N29710 | FB1 | HC2-48 | OR12 | RM1875 | RM4661 | RM5611 | YH501 | 13826 | ATCC 33237 | 525.92 | 03-427 | 04/554 | 82-40 | 84-112 | 97/608 | SP3 | cfvi03/293 | pet-3 | ATCC 33236 | ATCC BAA-381 | CCUG 27631 | LMG 9260 | 1485E | 2463D | RM11343 | NCTC 12927 | CCUG 22395 | LMG 11760 | NCTC 11845 | RM2100; ATCC BAA-1060D | RM16701 | RM16712 | Slaughter Beach | LMG 23910 | RM16704 | LMG 24374 | LMG 24377 | RIGS 9880 | LMG 24379 |
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0 | CP007777 | 39997 | G10 | None | 472 | -113 | 113bp upstream of UPTC16701_0039 | 78 | hypothetical protein | UPTC16701_0039 | CSUB8523_0034 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | CP007777 | 396187 | A10 | None | 441 | -54 | 54bp upstream of UPTC16701_0426 | 799 | molybdopterin-containing oxidoreductase I, DMSO/TMAO/BSO reductase family, catalytic subunit | CFT03427_0794 CFT03427_0438 | CFF04554_0427 | CFF8240_0429 | CSG_5080 | CFV97608_0429 | CFTSP3_0438 CFTSP3_0849 | CFVI03293_0426 | CR44_04040 CR44_02205 | CHH_0419 CHH_0761 | CIG1485E_0536 | CIG2463D_0536 | CINS_0409 | UPTC4110_0426 | CONCH_0433 | UPTC3659_0450 | Cla_0430 | UPTC16701_0426 | UPTC16712_0432 | CD56_02130 | CPEL_0439 | CAQ16704_0446 | CSUB8521_0462 | CSUB8523_0448 | CVOL_0420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | CP007777 | 429821 | C9 | None | -1 | -306 | 306bp upstream of UPTC16701_0457 | 2 | 16S ribosomal RNA | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | CP007777 | 429830 | T10 | None | -1 | -297 | 297bp upstream of UPTC16701_0457 | 2 | 16S ribosomal RNA | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | CP007777 | 483062 | C10 | None | -1 | -305 | 305bp upstream of UPTC16701_0513 | 2 | 16S ribosomal RNA | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | CP007777 | 655673 | G9 | 9 | 443 | 0 | UPTC16701_0685 | 870 | hypothetical protein | CJJ81176_0759 | A911_04670 | PJ16_05080 | PJ17_03570 | PJ19_05345 | M635_08855 | C8J_0908 C8J_0463 | A0W68_05070 | H730_04590 | A0W69_05740 | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1182 CAQ16704_1467 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
6 | CP007777 | 680189 | G10 | 10 | 443 | 0 | UPTC16701_0706 | 870 | hypothetical protein | CJJ81176_0759 | A911_04670 | PJ16_05080 | PJ17_03570 | PJ19_05345 | M635_08855 | C8J_0908 C8J_0463 | A0W68_05070 | H730_04590 | A0W69_05740 | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1182 CAQ16704_1467 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
7 | CP007777 | 814108 | G10 | None | 473 | -2 | 2bp upstream of UPTC16701_0833 | 1587 | putative adhesin/invasin (DUF3442 domain) | UPTC16701_0833 | CPEL_0141 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8 | CP007777 | 1033299 | G10 | 10 | 445 | 0 | UPTC16701_1056 | 397 | hypothetical protein (DUF2920 domain) | UPTC4110_1065 | UPTC3659_1299 | UPTC16701_1056 | UPTC16712_1086 | CD56_05580 | CAQ16704_1077 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9 | CP007777 | 1104690 | G8 | 8 | 169 | 0 | UPTC16701_1131 | 583 | No annotation data | N149_0993 | AB430_06575 | VC76_05155 | AR446_03010 | ATE51_01498 | YSQ_03705 | YSS_05720 | YSU_03750 | A6K30_03670 | CONCH_1111 | UPTC3659_1373 | UPTC16701_1131 | CPEL_1266 | CAQ16704_1150 | CSUB8521_1330 | CSUB8523_1431 | CVOL_1130 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
10 | CP007777 | 1120625 | G10 | 10 | 443 | 0 | UPTC16701_1140 | 870 | hypothetical protein | CJJ81176_0759 | A911_04670 | PJ16_05080 | PJ17_03570 | PJ19_05345 | M635_08855 | C8J_0908 C8J_0463 | A0W68_05070 | H730_04590 | A0W69_05740 | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1182 CAQ16704_1467 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
11 | CP007777 | 1191213 | G9 | 8 | 474 | 0 | UPTC16701_1207 | 286 | glucose-1-phosphate cytidylyltransferase | PJ17_07535 | CJM1cam_1380 | ICDCCJ07001_1367 | CJM1_1380 | MTVDSCj20_1400 | CjjRM3196_1435 | CjjRM3197_1435 | N149_1084 | G157_03220 | VC76_05610 | A6K30_03230 | CCON33237_0119 | CGRAC_1925 | CHH_0049 | CIG2463D_0052 | CONCH_0315 | UPTC16701_1207 | CVOL_0299 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12 | CP007777 | 1206445 | G9 | 8 | 96 | 0 | UPTC16701_1225 | 145 | dTDP-6-deoxy-3,4-keto-hexulose isomerase | BN867_11290 | C8J_1078 | CJ8421_05655 | RC25_05370 | CJM1cam_1116 | CJM1_1116 | MTVDSCj20_1141 | AR446_02560 | YSU_03280 | UPTC4110_1222 | UPTC16701_1225 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13 | CP007777 | 1270405 | G9 | 9 | 63 | 0 | UPTC16701_1291 | 228 | methyltransferase | JJD26997_0404 JJD26997_0405 | ICDCCJ07001_1256 | CjjRM3196_1326 CjjRM3196_1327 | CjjRM3197_1327 CjjRM3197_1326 | CINS_1273 CINS_1274 | UPTC4110_1297 UPTC4110_1298 | CONCH_1273 CONCH_1272 | UPTC3659_1533 UPTC3659_1534 | UPTC16701_1292 UPTC16701_1291 | UPTC16712_1313 UPTC16712_1314 | CSUB8521_1501 CSUB8521_1500 | CSUB8523_1596 CSUB8523_1597 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14 | CP007777 | 1405146 | C9 | None | 475 | 78 | 78bp downstream of UPTC16701_1426 | 926 | putative DNA helicase (AAA domain) | AB430_01475 | G157_00145 | YSQ_00180 | UPTC16701_1426 | CPEL_1558 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15 | CP007777 | 1442559 | C10 | None | 446 | -130 | 130bp upstream of UPTC16701_1466 | 695 | MCP-domain signal transduction protein | UPTC4110_1471 | CONCH_1442 | UPTC3659_1708 | Cla_1499 | UPTC16701_1466 | UPTC16712_1501 | CD56_07595 | CPEL_1598 | CAQ16704_1501 | CSUB8521_1703 | CSUB8523_1804 |