Strain name: LMG 11760
Filepath: ../polyG/campy.new\241781-744810511.gb
Species: C. lari
Created: 2018-09-09 12:25:37 (W. Europe Summer Time)
TractNo | Contig | Location | Tract | On length | Gene Group | Offset from gene | Gene | Length | Function | NCTC 11168 | 81-176 | PT14 | 00-0949 | 00-1597 | 00-2425 | 00-2426 | 00-2538 | 00-2544 | 00-6200 | 01-1512 | 269.97 | 4031 | 32488 | 35925B2 | 81116; NCTC 11828 | CG8421 | CJ677CC519 | CJM1cam | F38011 | IA3902 | ICDCCJ07001 | M1 | MTVDSCj20 | NCTC11351 | OD267 | R14 | RM1221 | RM1285 | RM3194 | RM3196 | RM3197 | S3 | WP2202 | YH001 | 15-537360 | BFR-CA-9557 | CVM N29710 | FB1 | HC2-48 | OR12 | RM1875 | RM4661 | RM5611 | YH501 | 13826 | ATCC 33237 | 525.92 | 03-427 | 04/554 | 82-40 | 84-112 | 97/608 | SP3 | cfvi03/293 | pet-3 | ATCC 33236 | ATCC BAA-381 | CCUG 27631 | LMG 9260 | 1485E | 2463D | RM11343 | NCTC 12927 | CCUG 22395 | LMG 11760 | NCTC 11845 | RM2100; ATCC BAA-1060D | RM16701 | RM16712 | Slaughter Beach | LMG 23910 | RM16704 | LMG 24374 | LMG 24377 | RIGS 9880 | LMG 24379 |
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0 | CP007771 | 31364 | A10 | 11 | 448 | 0 | CONCH_0029 | 614 | No annotation data | CONCH_0029 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 | CP007771 | 112042 | G9 | 9 | 449 | 0 | CONCH_0134 | 67 | hypothetical protein | CONCH_0134 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 | CP007771 | 144963 | G9 | 9 | 17 | 0 | CONCH_0163 | 636 | motility accessory factor | Cj1318 Cj1335 | A911_06490 A911_06480 | PJ16_07340 PJ16_07410 PJ16_07420 | PJ17_06980 PJ17_07060 | N135_01421 N135_01423 | N564_02285 N564_02295 | N565_02385 N565_02375 | N755_02445 N755_02435 | PJ18_06860 PJ18_06850 | PJ19_07340 PJ19_07420 PJ19_07410 | JJD26997_0374 JJD26997_0376 JJD26997_0396 | BN867_13180 BN867_13200 | M635_02285 M635_02370 | UC78_1278 UC78_1267 UC78_1276 | CJ8421_06665 | CJSA_1271 CJSA_1256 CJSA_1269 | ICDCCJ07001_1265 | ERS445056_01446 ERS445056_01430 ERS445056_01444 | H730_07620 H730_07630 | CJE1524 | AXW77_06575 AXW77_06490 AXW77_06565 | CjjRM3196_1335 | CJS3_1430 CJS3_1427 | A0W69_07845 | QZ67_01471 | N149_1281 N149_1298 N149_1296 | AB430_08255 AB430_08325 AB430_08340 | ATE51_00894 ATE51_00898 ATE51_00928 | YSQ_02185 YSQ_02175 YSQ_02255 | YSS_07245 YSS_07160 YSS_07240 | YSU_02270 YSU_02210 | A6K30_02235 A6K30_02165 A6K30_02155 | CINS_0156 CINS_1188 | CONCH_0163 | Cla_0168 | CSUB8521_0178 CSUB8521_0235 | CSUB8523_1511 CSUB8523_0172 | CVOL_0220 CVOL_1306 CVOL_1208 | |||||||||||||||||||||||||||||||||||||||
3 | CP007771 | 276292 | G9 | 9 | 450 | 0 | CONCH_0312 | 223 | hypothetical protein, putative serine acetyltransferase | CONCH_0312 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | CP007771 | 278412 | G10 | 10 | 451 | 0 | CONCH_0314 | 561 | glycosyltransferase, family 2 | CONCH_0314 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | CP007771 | 432297 | G9 | 9 | 4 | 0 | CONCH_0464 | 228 | SAM-dependent methyltransferase | Cj0170 Cj1325 | CJJ81176_0206 | A911_06440 | PJ16_07375 PJ16_00860 | PJ17_07015 PJ17_00860 | N135_02220 N135_00227 | N564_01845 N564_02250 | N565_00159 N565_02340 | N755_01910 N755_02400 | PJ18_06815 PJ18_01130 | PJ19_00860 PJ19_07375 | JJD26997_0185 JJD26997_0387 | M635_08930 M635_02325 | CJH_00885 | CJSA_1262 CJSA_0160 | ERS445056_01437 ERS445056_00175 | A0W68_07125 | H730_07585 | AXW77_06530 | A0W69_07805 A0W69_01730 | QZ67_01462 QZ67_00236 | N149_1289 | AB430_08290 | G157_02190 | VC76_06655 | ATE51_00914 | YSQ_02220 | CINS_1497 CINS_1195 | CONCH_0464 | Cla_1564 | CSUB8521_1418 CSUB8521_0553 | CSUB8523_1518 CSUB8523_0539 | CVOL_0451 | ||||||||||||||||||||||||||||||||||||||||||||
6 | CP007771 | 455747 | C7 | None | 452 | -89 | 89bp upstream of CONCH_0486 | 448 | malate:quinone-oxidoreductase | Cj0393c | CJJ81176_0416 | A911_01910 | PJ16_01910 | PJ17_01910 | N135_00437 | N564_00376 | N565_00426 | N755_00426 | PJ18_01910 | PJ19_02175 | JJD26997_1565 | BN867_03660 | M635_06275 | UC78_0379 | C8J_0368 | CJ8421_01970 | RC25_01950 | CJM1cam_0371 | CJH_01955 | CJSA_0366 | ICDCCJ07001_360 | CJM1_0371 | MTVDSCj20_0363 | ERS445056_00387 | A0W68_01900 | H730_02530 | CJE0442 | CjjRM1285_0369 | AXW77_01875 | CjjRM3196_0375 | CjjRM3197_0375 | CJS3_0383 | A0W69_02790 | QZ67_00395 | N149_0390 | AB430_03500 | G157_06675 | VC76_02060 | AR446_06150 | ATE51_03428 | YSQ_07920 | YSS_01740 | YSU_06920 | A6K30_06775 | CCC13826_0434 | CCON33237_1481 | CCV52592_1243 | CFT03427_0631 | CFF04554_0621 | CFF8240_0628 | CSG_6560 | CFV97608_0674 | CFTSP3_0629 | CFVI03293_0624 | CR44_03210 | CGRAC_0946 | CHAB381_1634 | CHL_1266 | CHH_1140 | CIG1485E_0721 | CIG2463D_0722 | CIG11343_0679 | CINS_0546 | UPTC4110_0483 | CONCH_0486 | UPTC3659_0508 | Cla_0480 | UPTC16701_0478 | UPTC16712_0486 | CD56_02390 | CPEL_0582 | CAQ16704_0501 | CSUB8521_0515 | CSUB8523_0501 | CVOL_0565 | |
7 | CP007771 | 545182 | G9 | 9 | 442 | 0 | CONCH_0577 | 707 | autotransporter domain protein | UPTC4110_0579 | CONCH_0577 | UPTC3659_0606 | CSUB8521_0608 | CSUB8523_0595 | CVOL_0507 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
8 | CP007771 | 652025 | G10 | 10 | 443 | 0 | CONCH_0686 | 869 | hypothetical protein | CJJ81176_0759 | A911_04670 | PJ16_05080 | PJ17_03570 | PJ19_05345 | A0W68_05070 | H730_04590 | A0W69_05740 | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1182 CAQ16704_1467 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
9 | CP007771 | 810496 | G7 | 7 | 453 | 0 | CONCH_0844 | 188 | DJ-1/PfpI family protein | Cj0899c | CJJ81176_0908 | A911_04345 | PJ16_04710 | PJ17_04340 | N135_00937 | N564_00868 | N565_00911 | N755_00908 | PJ18_04415 | PJ19_04975 | JJD26997_0914 | BN867_08850 | M635_08750 | UC78_0854 | C8J_0836 | CJ8421_04450 | RC25_04140 | CJM1cam_0865 | CJH_04485 | CJSA_0845 | ICDCCJ07001_855 | CJM1_0865 | MTVDSCj20_0896 | ERS445056_00872 | A0W68_04705 | H730_05375 | CJE0978 | CjjRM1285_0857 | AXW77_04355 | CjjRM3196_0909 | CjjRM3197_0909 | CJS3_0940 | A0W69_05375 | QZ67_00964 | N149_0874 | AB430_05965 | G157_04290 | VC76_04540 | AR446_03625 | ATE51_01748 | YSQ_04725 | YSS_04765 | YSU_04370 | A6K30_04285 | CINS_0861 | UPTC4110_0868 | CONCH_0844 | UPTC3659_1101 | Cla_0894 | UPTC16701_0859 | UPTC16712_0889 | CD56_04615 | CPEL_0994 | CAQ16704_0874 | CSUB8521_1053 | CSUB8523_1159 | CVOL_0865 | |||||||||||||||||||
10 | CP007771 | 896769 | G9 | None | 444 | -50 | 50bp upstream of CONCH_0934 | 784 | autotransporter domain protein | UPTC4110_0958 | CONCH_0934 | UPTC3659_1194 | UPTC16712_0986 | CPEL_1082 | CAQ16704_0970 | CSUB8521_1148 | CSUB8523_1254 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
11 | CP007771 | 1070284 | G8 | 8 | 169 | 0 | CONCH_1111 | 656 | phosphoglycerol transferase | N149_0993 | AB430_06575 | VC76_05155 | AR446_03010 | ATE51_01498 | YSQ_03705 | YSS_05720 | YSU_03750 | A6K30_03670 | CINS_1119 | CONCH_1111 | UPTC3659_1373 | UPTC16701_1131 | CPEL_1266 | CAQ16704_1150 | CSUB8521_1330 | CSUB8523_1431 | CVOL_1130 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
12 | CP007771 | 1085718 | G10 | 10 | 443 | 0 | CONCH_1120 | 869 | hypothetical protein | CJJ81176_0759 | A911_04670 | PJ16_05080 | PJ17_03570 | PJ19_05345 | A0W68_05070 | H730_04590 | A0W69_05740 | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1182 CAQ16704_1467 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
13 | CP007771 | 1107997 | C9 | 9 | 11 | 0 | CONCH_1141 | 73 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
14 | CP007771 | 1142627 | G9 | 9 | 17 | 0 | CONCH_1171 | 253 | No annotation data | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
15 | CP007771 | 1223452 | G9 | 9 | 15 | 0 | CONCH_1253 | 425 | hypothetical protein (DUF2172 domain), putative M28 family zinc peptidase | Cj1295 | CJJ81176_1312 | A911_06290 | PJ16_07255 | PJ17_06865 | N135_01383 | N564_01313 | N565_02300 | N755_01345 | PJ18_06675 | PJ19_07255 | JJD26997_0427 | BN867_12880 | M635_08875 | UC78_1247 | C8J_1238 | CJ8421_06450 | RC25_06170 | CJM1cam_1277 | CJH_06560 | CJSA_1233 | ICDCCJ07001_1243 | CJM1_1277 | MTVDSCj20_1301 | ERS445056_01406 | A0W68_06980 | H730_07425 | CJE1487 | CjjRM1285_1309 | AXW77_06385 | CjjRM3196_1311 | CjjRM3197_1311 | CJS3_1392 | A0W69_07665 | QZ67_01430 | N149_1256 | AB430_08160 | VC76_06500 | AR446_01680 | ATE51_00974 | YSQ_02385 | YSS_07030 | YSU_02410 | A6K30_02350 | CFT03427_1431 | CFF04554_1483 | CFF8240_1468 | CSG_16050 | CFV97608_1605 | CFTSP3_1495 | CFVI03293_1505 | CR44_07250 | CHL_1692 | CHH_1509 | CIG1485E_0398 | CIG2463D_0403 | CIG11343_0347 | CINS_1263 | UPTC4110_1286 | CONCH_1253 | UPTC3659_1523 | Cla_1300 | UPTC16701_1283 | UPTC16712_1302 | CD56_06695 | CPEL_1409 | CAQ16704_1312 | CSUB8521_1489 | CSUB8523_1585 | CVOL_1279 CVOL_1280 | |||||||
16 | CP007771 | 1237038 | G9 | 9 | 19 | 0 | CONCH_1266 | 255 | SAM-dependent methyltransferase | Cj1420c | CJJ81176_1419 | A911_06906 | PJ16_07835 | N135_02250 | N564_02340 | N565_02420 | N755_02475 | PJ18_07255 | PJ19_07830 | JJD26997_1753 | BN867_06890 | M635_08895 | UC78_1362 | C8J_0641 | CJ8421_07145 | RC25_06635 | CJM1cam_0659 | CJH_07485 | CJSA_1351 | CJM1_0659 | MTVDSCj20_0698 | ERS445056_01536 | A0W68_03575 | H730_08055 | CjjRM1285_1416 | AXW77_06990 | A0W69_08260 | QZ67_01555 | AR446_04835 | YSQ_05930 | YSS_03110 | YSU_05580 | CFT03427_1580 | CFF04554_1630 | CFF8240_1628 | CSG_17620 | CFV97608_1755 | CFTSP3_1645 | CFVI03293_1652 | CR44_08030 | CINS_0302 | CONCH_1266 | UPTC3659_1405 | Cla_0312 | CD56_06730 | CSUB8521_0343 | CSUB8523_0326 | |||||||||||||||||||||||||||||
17 | CP007771 | 1440685 | G10 | 10 | 443 | 0 | CONCH_1473 | 869 | hypothetical protein | CJJ81176_0759 | A911_04670 | PJ16_05080 | PJ17_03570 | PJ19_05345 | A0W68_05070 | H730_04590 | A0W69_05740 | UPTC4110_0710 UPTC4110_1148 | CONCH_0686 CONCH_1120 CONCH_1473 | UPTC3659_1740 UPTC3659_0546 UPTC3659_0799 UPTC3659_0778 UPTC3659_1382 | Cla_1529 | UPTC16701_0706 UPTC16701_0685 UPTC16701_1140 | UPTC16712_0708 UPTC16712_1172 | CD56_06005 Slaughter Beach [0] CD56_03810 | CPEL_0265 | CAQ16704_0853 CAQ16704_1159 CAQ16704_0537 CAQ16704_1182 CAQ16704_1467 CAQ16704_1533 | CSUB8521_0659 CSUB8521_1739 CSUB8521_1339 | CSUB8523_1841 CSUB8523_0747 CSUB8523_1440 | CVOL_1139 |