Analysis of poly-G tracts in ATCC 33237


Strain name: ATCC 33237
Filepath: ../polyG/campy.new\488621-930358546.gb
Species: C. concisus

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


TractNoContigLocationTractOn lengthGene GroupOffset from geneGeneLengthFunctionNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0CP012541147813G892100CCON33237_0131248No annotation dataCCON33237_0131
1CP012541475251C9None211-9999bp upstream of CCON33237_0472304acetyl-CoA carboxylase, carboxyltransferase, beta subunitCj0127cCJJ81176_0162A911_00610PJ16_00645PJ17_00645N135_00127N564_00120N565_00119N755_00119PJ18_00645PJ19_00645JJD26997_0140BN867_01180M635_04980UC78_0129C8J_0120CJ8421_00650RC25_00455CJM1cam_0126CJH_00650CJSA_0118ICDCCJ07001_120CJM1_0126MTVDSCj20_0124ERS445056_00132A0W68_00650H730_00660CJE0122CjjRM1285_0128AXW77_00640CjjRM3196_0128CjjRM3197_0128CJS3_0126A0W69_01510QZ67_00133N149_1583AB430_02165G157_08050VC76_08100AR446_07480ATE51_04208YSQ_09265YSS_09295YSU_08260A6K30_08095CCC13826_0941CCON33237_0472CCV52592_1756CFT03427_0258CFF04554_0251CFF8240_0251CSG_3330CFV97608_0253CFTSP3_0256CFVI03293_0251CR44_01300CGRAC_0637CHAB381_0537CHL_0345CHH_0221CIG1485E_0265CIG2463D_0270CIG11343_0213CINS_0204UPTC4110_0212CONCH_0211UPTC3659_0231Cla_0214UPTC16701_0220UPTC16712_0218CD56_01075CPEL_0216CAQ16704_0217CSUB8521_0221CSUB8523_0215CUREO_0555CVOL_0207
2CP012541536844G772120CCON33237_053599No annotation data
3CP0125411097950G8None21355bp downstream of CCON33237_1104522terminase domain proteinCCON33237_1104CFF04554_1119CFF8240_0649CSG_5840
CSG_7270
CSG_13130
CFV97608_1317
CFV97608_0749
CFV97608_0486
CFVI03293_1066CGRAC_0605
4CP0125411169547C9None214192192bp downstream of CCON33237_1186206metallophosphataseCCON33237_1186
5CP0125411344173G89430CCON33237_13581277No annotation dataICDCCJ07001_1013CCON33237_1358
6CP0125411744728G982150CCON33237_17571012type II restriction endonucleaseCCON33237_1757CIG11343_0874
7CP0125411764053A10None-1-6767bp upstream of CCON33237_177917No annotation data