Analysis of poly-G tracts in 2463D


Strain name: 2463D
Filepath: ../polyG/campy.new\603451-971185943.gb
Species: C. iguaniorum

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


TractNoContigLocationTractOn lengthGene GroupOffset from geneGeneLengthFunctionNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0CP0109958652C8None236-124124bp upstream of CIG2463D_0008499No annotation dataCIG1485E_0008
CIG1485E_0473
CIG2463D_0008
CIG2463D_0474
CIG11343_0424
1CP01099528349G9None362-1212bp upstream of CIG2463D_0022348EpsG family proteinCHH_0019CIG1485E_0022CIG2463D_0022
2CP01099530419G993630CIG2463D_0023375glycosyltransferase, family 1CHL_0081CHH_0020CIG1485E_0023CIG2463D_0023
3CP01099532889G983640CIG2463D_0026195hypothetical proteinCHH_0023CIG2463D_0026
4CP01099533586G10113650CIG2463D_0028209No annotation dataCHH_0024CIG2463D_0028
5CP01099534183G11114130CIG2463D_0029285hypothetical proteinCIG2463D_0029
6CP01099539960G993660CIG2463D_0034435hypothetical proteinCHH_0029CIG2463D_0034
7CP01099541825G9103670CIG2463D_0036195transferase hexapeptide repeat containing protein, putativeCHH_0032CIG2463D_0036
8CP01099544192A10104140CIG2463D_0038503polysaccharide biosynthesis protein, putativeCHH_0035CIG2463D_0038
9CP01099547199G993690CIG2463D_0041283methyltransferase FkbM family protein, putativeCHH_0038CIG2463D_0041
10CP01099548159G983700CIG2463D_0042168transferase hexapeptide repeat containing protein, putativeCHH_0039CIG2463D_0042
11CP01099549095G10104150CIG2463D_0043391NAD dependent epimerase/dehydratase, putativeCHH_0040CIG2463D_0043
12CP01099550557G994160CIG2463D_0045325methyltransferase, putativeCIG2463D_0045
13CP01099551554G1094170CIG2463D_0046247No annotation dataCIG2463D_0046
14CP01099559437G994180CIG2463D_0055312epimerase/dehydratase, putativeCHH_0052CIG2463D_0055
15CP01099566964G994190CIG2463D_0063347hypothetical proteinCIG2463D_0063
16CP01099584046G994020CIG2463D_0077155hypothetical proteinCIG1485E_0074CIG2463D_0077CIG11343_0034
17CP010995111590G784200CIG2463D_0120502No annotation dataCFT03427_1598CFF04554_1648CFF8240_1646CSG_17800CFV97608_1773CFTSP3_1663CFVI03293_1670CR44_08120CHH_1691CIG1485E_0117CIG2463D_0120
18CP010995279604G994040CIG2463D_0294690TonB-dependent receptorCFT03427_0282CFF04554_0275CFF8240_0276CSG_3570CFV97608_0277CFTSP3_0280CFVI03293_0275CR44_01420CIG1485E_0289CIG2463D_0294CIG11343_0236
19CP010995386827G88150CIG2463D_0403423hypothetical proteinCj1295A911_06290PJ16_07255PJ17_06865N135_01383N564_01313N565_02300N755_01345PJ18_06675PJ19_07255JJD26997_0427BN867_12880M635_08875UC78_1247C8J_1238CJ8421_06450RC25_06170CJM1cam_1277CJH_06560CJSA_1233ICDCCJ07001_1243CJM1_1277MTVDSCj20_1301ERS445056_01406A0W68_06980H730_07425CJE1487CjjRM1285_1309AXW77_06385CjjRM3196_1311CjjRM3197_1311CJS3_1392A0W69_07665QZ67_01430N149_1256AB430_08160VC76_06500AR446_01680ATE51_00974YSQ_02385YSS_07030YSU_02410A6K30_02350CFT03427_1431CFF04554_1483CFF8240_1468CSG_16050CFV97608_1605CFTSP3_1495CFVI03293_1505CR44_07250CHL_1692CHH_1509CIG1485E_0398CIG2463D_0403CIG11343_0347CINS_1263UPTC4110_1286CONCH_1253UPTC3659_1523Cla_1300UPTC16701_1283UPTC16712_1302CD56_06695CPEL_1409CAQ16704_1312CSUB8521_1489CSUB8523_1585CVOL_1279
CVOL_1280
20CP010995463780C992360CIG2463D_0474645autotransporter domain proteinCIG1485E_0008
CIG1485E_0473
CIG2463D_0008
CIG2463D_0474
CIG11343_0424
21CP010995528222G10None405-276276bp upstream of CIG2463D_0543286hypothetical proteinCIG1485E_0543CIG2463D_0543
22CP010995599401G884060CIG2463D_06171129autotransporter domain proteinCIG1485E_0617CIG2463D_0617
23CP010995649565G10104070CIG2463D_0654946autotransporter domain proteinCIG1485E_0654CIG2463D_0654
24CP010995793410C10102360CIG2463D_0797639outer membrane autotransporter, putativeCIG1485E_0008
CIG1485E_0796
CIG1485E_0473
CIG2463D_0797
CIG2463D_0008
CIG2463D_0474
CIG11343_0424
25CP010995804205G994210CIG2463D_0809112No annotation data
26CP010995894113C992150CIG2463D_0899993type II restriction enzyme, putativeCIG2463D_0899CIG11343_0874
27CP010995942058G883480CIG2463D_0946484membrane bound O-acyl transferase, MBOAT familyBN867_11440C8J_1093CJM1cam_1130CJM1_1130MTVDSCj20_1154CCV52592_0864CFT03427_1695CFF04554_1747CFF8240_1751CSG_18810CFV97608_1874CFTSP3_1760CFVI03293_1771CR44_08610CHL_0862CHH_0868CIG1485E_0946CIG2463D_0946CIG11343_0927CINS_1186UPTC4110_1214CD56_06335CVOL_1205
28CP010995970269G984220CIG2463D_0979517regulator of chromosome condensation RCC1, putativeCIG2463D_1365
CIG2463D_0979
29CP010995972949G984230CIG2463D_0981208phage tail fiber protein, putativeCFTSP3_0685CIG2463D_0981
30CP0109951048958T12None381-6161bp upstream of CIG2463D_1068210putative outer membrane proteinCHH_0814CIG1485E_1015CIG2463D_1068
31CP0109951055894G10102360CIG2463D_1074714autotransporter domain proteinCIG1485E_0008
CIG1485E_1021
CIG1485E_0473
CIG2463D_0797
CIG2463D_1074
CIG2463D_0008
CIG2463D_0474
CIG11343_0424
CIG11343_0986
32CP0109951141082G9None409-3535bp upstream of CIG2463D_1166115hypothetical proteinCIG1485E_1074CIG2463D_1166
33CP0109951228337G874100CIG2463D_1258411hypothetical proteinCIG1485E_1167CIG2463D_1258CIG11343_1121
34CP0109951277426G993420CIG2463D_1314788autotransporter domain proteinCHH_1466CIG1485E_1223CIG2463D_1314
35CP0109951277581C9None342-5959bp upstream of CIG2463D_1314788autotransporter domain proteinCHH_1466CIG1485E_1223CIG2463D_1314
36CP0109951325919G984220CIG2463D_1365516hypothetical proteinCIG2463D_1365
CIG2463D_0979
37CP0109951429857G994240CIG2463D_1478148hypothetical proteinCHL_0383CIG2463D_1478
38CP0109951573266C10None412-164164bp upstream of CIG2463D_1644605hypothetical proteinCHH_0151CIG1485E_1451
CIG1485E_0159
CIG2463D_1644
CIG2463D_0162
39CP0109951618276G993320CIG2463D_1693389ATP-grasp domain-containing proteinCJH_06665CHL_0231CHH_1590CIG1485E_1499
CIG1485E_1500
CIG2463D_1693
CIG2463D_1692
CIG11343_1444
CIG11343_1443
40CP0109951625873G993340CIG2463D_1701340aminotransferase, DegT/DnrJ/EryC1/StrS familyCHL_0240CHH_1599CIG1485E_1504CIG2463D_1701CIG11343_1453
41CP0109951711512G10102360CIG2463D_1791816autotransporter domain proteinCIG1485E_1594CIG2463D_1791
CIG2463D_0008
CIG2463D_0474
CIG11343_0424
42CP0109951724355C883210CIG2463D_1804537sulfatase family proteinCHL_0019CHH_1700CIG1485E_1607CIG2463D_1804CIG11343_1542
43CP0109951750222G10104250CIG2463D_1832319family 2 glycosyl transferase, putativeCIG2463D_1832