Gene group 28

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
28CJJ81176_1160beta-1,4-N-acetylgalactosaminyltransferase111139Cj1143
CJ..6_1160
CJ..6_1154
A911_05540
PJ16_05955
PJ17_05850
PJ17_05825
N135_01180
N564_01109
N565_01152
N755_01147
PJ18_05640
PJ19_06220
BN.._11380
M635_01390
C8J_1086
RC25_05405
CJ..m_1124
CJSA_1085
IC..1_1095
CJM1_1124
MT..0_1148
ER.._01246
ER.._01253
A0.._05945
Cj..5_1154
AX.._05620
AX.._05595
Cj..6_1154
Cj..7_1154
A0.._06905
QZ67_01221
QZ67_01215
YSS_06175
CINS_1207
UP..1_1215
UP..1_1216
UP..2_1241
CS..1_1425

Annotated functions

Function#Occuringscore
beta-1,4-N-acetylgalactosaminyltransferase71.33
Beta-1,4-N-acetylgalactosaminyltransferase (CgtA)11.29
beta-1%2C4-N-acetylgalactosaminyltransferase20.33
No annotation data10.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CJ..6_1160
PJ17_05850
ER.._01253
AX.._05620
QZ67_01221
YSS_06175
CS..1_1425
1
PJ18_05640
M635_01390
ER.._01246
CINS_1207

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CJ..6_1160
PJ17_05850
ER.._01253
AX.._05620
QZ67_01221
YSS_06175
CS..1_1425
1
PJ18_05640
M635_01390
ER.._01246
CINS_1207

81-176

81-176 : CJJ81176_1160 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 MLKKIISLYKRYSISKKLVLDNEHFIKENKNIYGKKHKGFFDFDEKAKDVKSPLNPWGFIRVKNEALTLRVSLESILPALQRGIIAYNDCDDGSEELILE
+100 FCKQYPNFIAKKYPYKVDLENPKNEENKLYSYYNWAASFIPLDEWFIKIDVDHYYDAKKLYKSFYRIDQENKALCYPRINFIILNGNIYVQNSGNYGFIG
+200 GGDQLLIKRRNSSFIERRVSKKSQWIDPKGLIEELYSEQQVLSQGVKILQAPLLQWHFPALKYRRNDYQQYLDILSLEEFQAFHRKSKEAKKIDFAMLKR
+300 PVIEQILKKFQGEIK

[show detailed alignment]

00-1597

00-1597 : PJ17_05850 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 MLKKIISLYKRYSISKKLVLDNEHFIKENKNIYGKKHKGFFDLDEKAKDVKSPLNPWGFIRVKNEALTLRVSLESILPALQRGIIAYNDCDDGSEELILE
+100 FCKQYPNFIAKKYPYKVDLENPKNEENKLYSYYNWAASFIPLDEWFIKIDVDHYYDAKKLYKSFYRIDQENKALCYPRINFIILNGNIYVQNSGNYGFIG
+200 GGDQLLIKRRNSSFIEKRVSKKSQWIDPKGLIKELYSEQQVLSQGVKILQAPLLQWHFPALKYRRNDYQQYLDILSLEEFQAFHRKSKEAKKIDFAMLKR
+300 PVIEQILKKFQGEIK

[show detailed alignment]

00-6200

00-6200 : PJ18_05640 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 MLFQSYFVKIICLFIPFRKIRHKIKKTFLLKNIQRDKIDSYLPKKTLIQINKYNNEDLIKLNKAIIGGGHKGYFNYDEKSKDPKSPLNPWAFIRVKNEAI
+100 TLKASLESILPAIQRGVIGYNDCTDGSEEIILEFCKQYPSFIPIKYPYEIQIQNPKSEENKLYSYYNYVASFIPKDEWLIKIDVDHYYDAKKLYKSFYIP
+200 RKNYHVISYSRIDFIFNEEKFYVYRNKEGEILKAPGDCLAIQNTNLFWKEILIEDDTFKWNTAKNNIENAKSYEILKVRNRIYFTTELNNYHFPFIKNYR
+300 KNDYKQLNWVSLDDFIKNYKEKLKNQIDFKMLEYKTLKKVYKKLTSSASDKI

[show detailed alignment]

32488

32488 : M635_01390 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 VKIICLFIPFRKIRHKIKKTFLLKNIQRDKIDSYLPKKTLVQINKYNNEDLIKLNKAITGGGHKGYFNYDEKSKDPKSPLNPWAFIRVKNEAITLKASLE
+100 SILPAIQRGVIGYNDCTDGSEEIILEFCKQYPSFIPIKYPYEIQIQNPKSEENKLYSYYNYVASFIPKDEWLIKIDVDHYYDAKKLYKSFYIPRKNYHVI
+200 SYSRIDFIFNEEKFYVYQNKEGEILKAPGDCLAIQNTNLFWKEILIEDDTFKWNTAKNNIENAKSYEILKVRNRIYFTTELNNYHFPFIKNYRKNDYKQL
+300 NWVSLDDFIKNYKEKLKNQIDFKMLEYKTLKKVYKKLTSSTSDKI

[show detailed alignment]

NCTC11351

NCTC11351 : ERS445056_01246 [tract entry] [top]

Function: beta-1%2C4-N-acetylgalactosaminyltransferase
+0 MLFQSYFVKIICLFIPFRKIRHKIKKTFLLKNIQRDKIDSYLPKKILIQINKYNNEDLIKLNKAITGGGGHKGYFNYDEKSKDPKSPLNPWAFIRVKNEA
+100 ITLKASLESILPAIQRGVIGYNDCTDGSEEIILEFCKQYPSFIPIKYPYEIQIQNPKSEENKLYSYYNYVASFIPKDEWLIKIDVDHYYDAKKLYKSFYI
+200 PRKNYHVISYSRIDFIFNEEKFYVYRNKEGEILKAPGDCLAIQNTNLFWKEILIEDDTFKWNTAKNNIENAKSYEILKVRNRIYFTTELNNYHFPFIKNY
+300 RKNDYKQLNWVSLDDFIKNYKEKLKNQIDFKMLEYKTLKKVYEKLTSSASDKI

[show detailed alignment]

NCTC11351 : ERS445056_01253 [tract entry] [top]

Function: beta-1%2C4-N-acetylgalactosaminyltransferase
+0 MLKKIISLYKRYSISKKLVLDNEHFIKENKNIYGKKHKGFFDFDEKAKDVKSPLNPWGFIRVKNEALTLRVSLESILPALQRGIIAYNDCDDGSEELILE
+100 FCKQYPNFIAKKYPYKVDLENPKNEENKLYSYYNWAASFIPLDEWFIKIDVDHYYDAKKLYKSFYRIDQENKALCYPRINFIILNGNIYVQNSGNYGFIG
+200 GGDQLLIKRRNSSFIERRVSKKSQWIDPKGLIEELYSEQQVLSQGVKILQAPLLQWHFPALKYRRNDYQQYLDILSLEEFQTFHRKSKEAKKIDFAMLKR
+300 PVIEQILKKFQGEIK

[show detailed alignment]

RM3194

RM3194 : AXW77_05620 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 MLKKIISLYKRYSISKKLVLDNEHFIKENKNIYGKKHKGFFDLDEKAKDVKSPLNPWGFIRVKNEALTLRISLESILPALQRGIIAYNDCDDGSEELILE
+100 FCKQYPNFIAKKYPYKVDLENPKNEENKLYSYYNWAASFIPLDEWFIKIDVDHYYDAKKLYKSFYRIDQENKALCYPRINF

[show detailed alignment]

YH001

YH001 : QZ67_01221 [tract entry] [top]

Function: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA)
+0 MLKKIISLYKRYSISKKLVLDNEHFIKENKNIYEKKHKGFFDLDEKAKDVKSPLNPWGFIRVKNEALTLRVSLESILPALQRGIIAYNDCDDGSEELILE
+100 FCKQYPNFIAKKYPYKVDLENPKNEENKLYSYYNWAASFIPLDEWFIKIDVDHYYDAKKLYKSFYRIDQENKALCYPRINFIILNGNIYVQNSGNYGFIG
+200 GGDQLLIKRRNSSFIERRVSKKSQWIDPKGLIEELYSEQQVLSQGVKILQAPLLQWHFPALKYRRNDYQQYLDILSLEEFQAFHRKSKEAKKIDFAMLKR
+300 PVIEQILKKFQGEIK

[show detailed alignment]

RM4661

RM4661 : YSS_06175 [tract entry] [top]

Function: No annotation data
+0 MLKKIISLYKRYSISKKLVLDNEHFIKENKNIYGKKHKGFFDFDEKAKDVKSPLNPWGFIRVKNEALTLRVSLESILPALQRGIIAYNDCDDGSEELILE
+100 FCKQYPNFIAKKYPYKVDLENPKNEENKLYSYYNWAASFIPLDEWFIKIDVDHYYDAKKLYKSFYKIDQENKALCYPRINFIILNGNIYVQNSGNYGFIG
+200 GGDQLLIKRRNSSFIERRVSKKSQWIDPKGLIEELYSEQQVLSQGVKILQAPLLQWHFPALKYRRNDYQQYLDILSLEEFQAFHRKSKEAKKIDFAMLKR
+300 PVIEQILKKFQGEIK

[show detailed alignment]

NCTC 12927

NCTC 12927 : CINS_1207 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 MQFNFLRNIERKLRTYFKHKSIPLNKIDLLIETNIVSSINNHSNEYFIQKNKDIYGGGHKGYFDFDIKSKDHKSPLNPWAFIRVKNEAITLRASLESMLP
+100 AIQRGIIAYNDCTDGSEEIILEFCKQYPSFIPKKYPYEVQMENPQSEDNKLHSYYNFALSFIPKGEWLIKIDTDHIYDAKKLYKSFYIPKKDYHIVCYSR
+200 IDFVFRDDKFYVCQDKDDNVLKAPSDHWLLKNKKIYFKEILRSWGYSYHHSNVIDKKQMRFYEELVAKHKIKYFTELNNYHFPYIKKYRNIPSNLKLILL
+300 DEFVEKNKIKLKDKIDFTMLEKDILYRIYENFILKE

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_1425 [tract entry] [top]

Function: beta-1,4-N-acetylgalactosaminyltransferase
+0 MTLFYKIIAFLRLLKIDKKLKFDNEYFLKLNKKIYNEKHKGFFDFDPNSKNLKSPLNPWAFIRVKNEAITLRASLESMLPAIQRGVIGYNDCTDGSEEII
+100 LEFCKQYPSFIPVKYPHEVQIENPQSEENKLHSYYNYVASFIPQDEWFIKIDVDHYYDAKKLYKSFYMASKNTAVRFPRINFLILDNKIVIQDIGGGGCG
+200 FIDGGDQLLIQKCNSVFIERMVSKQSQWIDPEKTVKELYSEQQIIPKYLKILQAELLQWHFPALKYRRNDYQKHLDALTLEDFKKIHYRHRKIKKIDYTM
+300 LDEKVIREILGKFKLSGKK

[show detailed alignment]