Gene group 444

[Back to Gene Group Index]

Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
444UPTC4110_0958autotransporter domain protein067
UP..0_0958
CONCH_0934
UP..9_1194
UP..2_0986
CA..4_0970
CS..1_1148
CS..3_1254

Annotated functions

Function#Occuringscore
autotransporter domain protein30.86
No annotation data30.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
UP..0_0958
CONCH_0934
1
UP..9_1194
UP..2_0986
CS..1_1148
CS..3_1254

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
UP..0_0958
CONCH_0934
1
UP..9_1194
UP..2_0986
CS..1_1148
CS..3_1254

CCUG 22395

CCUG 22395 : UPTC4110_0958 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYHTSKVLMGVSISALLSSAALAQEINSGNLHSSFNYKDGIWSLDSKENIELKTNPSMLQLYPIQEGINGTGKTIKEINIKTSGILTIGSDSDWVDL
+100 GETPTNEARYDLYSVNLEAKEVILNKDQTSLKANKAFNIKGNVTLNGSSPITGDNINDWELDRPSLDVWNGYGEKDGYMNIQGNLNVNNSFIGIYDANKK
+200 GGLISVDGDVNIKDSAIGISTNSVSNLGINNYVAIKTTGNFNQDIDKNIVTALYTKDITSMLETSNLLPKNVFFEDTDLAQFTDYKLSVSNDGKSLLISG
+300 GANENVRDLSKILKSEIDIRNEALDSFNNIKEDIKRNENLENSGFGTYQKPGYIGDDAMLEAIAQAEKELQEQIKKLEQQIKDIEANGGKPDGGDLVENM
+400 KDISLENKNLAVNMLNSILDSKLSNDAVAALTLDTTGKNLNTLTTNTKASAKAIVNNAQNSSVNSSIGVANDLAIGTRVAKLSNPYQDKALVEKFATTHI
+500 AALASDIYNYYGNSSFNNSFWGNVFGGANIIDGDSGALYGFTLGADRKINDNALLGFYFTYADSTIKDGVMEQKSDNYQFGIYSLINPNDQWEISLRAYG
+600 QISPTDQSVAMLSDSSNADFDSKFFGLSANAGRIFNPNSSSLFIKPFAGINYYYAYTPSYKESGMFAKEVQSITNNSLSLELGTELRKYMSETSYLFITP
+700 KIEQYVMNNGDDYVAGFIGSSSNFIIKGNDKKKTYGQIIIGGNVDINEQFSLNAGVGAKQILAGKTDGKNETYVSGQVGFKYKF

[show detailed alignment]

LMG 11760

LMG 11760 : CONCH_0934 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYHTSKVLMGVSISALLSSATLAQEINHGNFSDFFNYKDGIWSLDSKENIELKISPSMLQLYPIQEGINGAGKTIKEINIKTSDILAIGSDSDWVDL
+100 GETSTNEARYDLYSVNLEAKEVILNKDQTSLKANKAFNIKGNLTLNGSSPITNDNISNEELDRPSLDVWNGYGEKDGYMNIQGNLNINNSFIGIHDANKK
+200 GGLISVDGDVNIKDSAIGISTNSVSNLGIKNYVAIKTTGSFNQDIDKNIITALYTKDITSMLETSNLLPKNIFFEDTDLAQFTDYKLSVSNDGKSLLISG
+300 GANENVRDLSMILKSEIDIRKEALDSFNNIKEDIKRNENLENSGFGTYQKPGYIGDDAMLEAIAQAEKELQEQIKKLEQQIQDIQDNGGKFNGGDLVENM
+400 KDVSLENKNLAVNMLNSILDSKLNNDAIAALTLDTSGKNLNTLTTNTKASAKAIVNNAQNSSVNSSIGVANDLAIGTRIAKLSNPYQDKALVEKFATTHI
+500 AALASDVYNYYGNSSFNNSFWGNVFGGANIIDGDSGALYGFTLGADRKINDNALLGFYFTYADSTIKDGVMEQKSDNYQFGIYSLINPNDQWEINLRAYG
+600 QISPTDQSVMMLSDFSNANFDSKFFGLSANAGRIFNPNSSSLFIKPFAGINYYYAHTPSYKESGMFAKDVQSMTNNSISLELGAEFRKYMSEASYLFITP
+700 KIEQYVMNDGDDFVAGFVGSGSNFIIKGNDKKKTYGQIIIGGNVDISEQFSLNAGIGAKQILAGKTDGKNETYVSGQVGFKYKF

[show detailed alignment]

NCTC 11845

NCTC 11845 : UPTC3659_1194 [tract entry] [top]

Function: No annotation data
+0 MKLSYHTSKVLMGVSISALLSSAALAQEIKLGNFTDYFNYKDGIWSLDSKENIELKMDPSDIQSYQITINL

No BLAST hits


RM16712

RM16712 : UPTC16712_0986 [tract entry] [top]

Function: autotransporter domain protein
+0 MKLSYYTSKIVIGVSISALLSSAALAQEINHGNFSSYFSYKDGIWSLDSKENIELKIQPGSIQAYYGKENHDKPIKEFNIKTSGILTIGSDLDWIDVGET
+100 STNEAKYDLYSVNLEAKEIVLNKDQTSLKANKAFNIKGNLALNGSSPITNDNISNEELDRPGLDVWNGYGEKDGYMSIQGNLNVNNSFIGIYDANKKGGL
+200 ISVDGDVNIKGSAIGISTNSVSNLGINNYVAIKTTGSFNQDIDKNLVTALYTKDITSMLETSNLLPKNVFFEDTDLAQFTDYKLSVSNDGKSLLISGGAN
+300 ENVRDLSKILKSEIDIRKEALDTFENIKSSIEYDENYNQNSYQKPGYIGDEAMLDAIAQAEKELQEQIKKLEQQIQDIQDNGGKFDGSDLVENMKDISLE
+400 NKNLAVNMLNSILDSKLSNDAIAALTLDTTGKNLNTLTTNTKASAKTIVNNAQNSSVNSSIGVANDLAIGTRIAKLSNPYQDKALVEKFATTHIAALASD
+500 VYNYYGNSSFNNSFWGNVFGGANIIDGDSGALYGFTLGADRKINDNALLGFYFTYADSTIKDGVMEQKSDNYQFGIYSLINPNDQWEINLRAYGQISPTD
+600 QSVVMLNDSNKADFDSKFFGLSANAGRIFNPNSSSLFIKPFAGINYYYAHTPSYKESGMFAKDVQSMTNNSISLELGAEFRKYMSETSYLFITPKIEQYV
+700 MNNGDDYVAGFVGSNSNFIIKGNDKKKAYGQIIIGGNVDINEQFSLNAGVGAKQILAGKTDGKNETYVSGQVGFKYKF

[show detailed alignment]

LMG 24374

LMG 24374 : CSUB8521_1148 [tract entry] [top]

Function: No annotation data
+0 MKLSYYTSKVLMGVSISALLSGAALAQEINYINLSDFFKYKDGIWSLDSKENIELKITPSDIQSYYGGENHDKPIKEFNIKTSGILTIGDEDNWIDVGST
+100 STNEAKYDLYSVNLEAKEIILNKDQASLKANKAFNIKGNLTLNGSSPITNDNIHNEELDRPGLYVWNGYGEKDGYMSIQGNLNVNNSFIGIFDANKKGGL
+200 ISVDGDVNIKDSAIGISTNSVSNLGINNYVAIKTTGNFNQDIDKNIVTALYTKDITSMLETSNLLPKNVFFEDTDLAQFTDYKLSVSNDGKSLLISGGAN
+300 ENVRDLSKILKSEIDIRKEALDTFEGIKKDIEYNKNSYQKPGYIGDDAMLEAIAQAEKELQEQIQKLEQQIQDIKDNGGKFDGGDLVENMKDVSLENKNL
+400 AVNMLNSILDSKLSNDAVAALTLDTTGKNLNTLTTNTKASAKAIVNNAQKFFC

[show detailed alignment]

LMG 24377

LMG 24377 : CSUB8523_1254 [tract entry] [top]

Function: No annotation data
+0 MKLSYYTSKVLMGVSISALLSSAALAKEIVYGNFSDFFNYKDGIWSLDSKENIELKIQPGSIQAYYGGENHDKPIKEFNIKTSGILTIGDKDNWIDVGST
+100 STNEAKYDLYSVNLEAKEIILNSDRATLEANKAFNIKGNVTLNGSSPITNDNIHNEELDRPLLEV

No BLAST hits