Gene group 239

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Created: 2018-09-09 12:25:37 (W. Europe Summer Time)


#GroupNameLikely Function#PV in gene#Total PV#Total GenesC. jejuni
NCTC 11168
C. jejuni
81-176
C. jejuni
PT14
C. jejuni
00-0949
C. jejuni
00-1597
C. jejuni
00-2425
C. jejuni
00-2426
C. jejuni
00-2538
C. jejuni
00-2544
C. jejuni
00-6200
C. jejuni
01-1512
C. jejuni
269.97
C. jejuni
4031
C. jejuni
32488
C. jejuni
35925B2
C. jejuni
81116; NCTC 11828
C. jejuni
CG8421
C. jejuni
CJ677CC519
C. jejuni
CJM1cam
C. jejuni
F38011
C. jejuni
IA3902
C. jejuni
ICDCCJ07001
C. jejuni
M1
C. jejuni
MTVDSCj20
C. jejuni
NCTC11351
C. jejuni
OD267
C. jejuni
R14
C. jejuni
RM1221
C. jejuni
RM1285
C. jejuni
RM3194
C. jejuni
RM3196
C. jejuni
RM3197
C. jejuni
S3
C. jejuni
WP2202
C. jejuni
YH001
C. coli
15-537360
C. coli
BFR-CA-9557
C. coli
CVM N29710
C. coli
FB1
C. coli
HC2-48
C. coli
OR12
C. coli
RM1875
C. coli
RM4661
C. coli
RM5611
C. coli
YH501
C. concisus
13826
C. concisus
ATCC 33237
C. curvus
525.92
C. fetus
03-427
C. fetus
04/554
C. fetus
82-40
C. fetus
84-112
C. fetus
97/608
C. fetus
SP3
C. fetus
cfvi03/293
C. fetus
pet-3
C. gracilis
ATCC 33236
C. hominis
ATCC BAA-381
C. hyointestinalis
CCUG 27631
C. hyointestinalis
LMG 9260
C. iguaniorum
1485E
C. iguaniorum
2463D
C. iguaniorum
RM11343
C. insulaenigrae
NCTC 12927
C. lari
CCUG 22395
C. lari
LMG 11760
C. lari
NCTC 11845
C. lari
RM2100; ATCC BAA-1060D
C. lari
RM16701
C. lari
RM16712
C. lari
Slaughter Beach
C. peloridis
LMG 23910
C. sp.
RM16704
C. subantarcticus
LMG 24374
C. subantarcticus
LMG 24377
C. ureolyticus
RIGS 9880
C. volucris
LMG 24379
239CFT03427_1510ATP-grasp domain protein121212
CF..7_1510
CF..4_1562
CF..0_1551
CF..0_1552
CSG_16870
CSG_16880
CF..8_1684
CF..3_1574
CF..3_1574
CR44_07655
CR44_07655
CHL_0243

Annotated functions

Function#Occuringscore
ATP-grasp domain-containing protein10.43
ATP-grasp domain protein10.43
phosphoribosylglycinamide formyltransferase 210.38
No annotation data40.00
hypothetical protein50.00

Subgroups

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1510
CF..4_1562
CF..0_1551
CF..0_1552
CSG_16870
CSG_16880
CF..8_1684
CF..3_1574
CF..3_1574
CR44_07655
CR44_07655
1
CHL_0243

Predicted On/Off state

SubgroupNCTC 1116881-176PT1400-094900-159700-242500-242600-253800-254400-620001-1512269.9740313248835925B281116; NCTC 11828CG8421CJ677CC519CJM1camF38011IA3902ICDCCJ07001M1MTVDSCj20NCTC11351OD267R14RM1221RM1285RM3194RM3196RM3197S3WP2202YH00115-537360BFR-CA-9557CVM N29710FB1HC2-48OR12RM1875RM4661RM5611YH50113826ATCC 33237525.9203-42704/55482-4084-11297/608SP3cfvi03/293pet-3ATCC 33236ATCC BAA-381CCUG 27631LMG 92601485E2463DRM11343NCTC 12927CCUG 22395LMG 11760NCTC 11845RM2100; ATCC BAA-1060DRM16701RM16712Slaughter BeachLMG 23910RM16704LMG 24374LMG 24377RIGS 9880LMG 24379
0
CF..7_1510
CF..4_1562
CF..0_1551
CF..0_1552
CSG_16870
CSG_16880
CF..8_1684
CF..3_1574
CF..3_1574
CR44_07655
CR44_07655
1
CHL_0243

03-427

03-427 : CFT03427_1510 [tract entry] [top]

Function: ATP-grasp domain protein
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLKLADISYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTDETIGGGGLSLDKGEDLRPIECHLITPNLDSSILKFPLIIKPRFGSGSRDVIAVKNQDEFKNTLSKIDLSKEDFLAETLVEG
+200 TEYGLSGAVINGVYIHILIREKLLTPLPYRQSIGNLSASEISEVSRYMQRVATRLNLKNCLINADLIVTPEGEPFIIELAPRPSGHYLSSTFVEIATGVN
+300 MTKEWINMILSKPFSFEPKFTKHAIIRYFDFEGRVIPPNFEILKEELGIVKYECNINGVLGIVTDGASIMNRGYAIIVANNKQECLANTDALIKKFKKEI
+400 K

[show detailed alignment]

04/554

04/554 : CFF04554_1562 [tract entry] [top]

Function: ATP-grasp domain-containing protein
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLRLADVSYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTNETMGGVFPPSEEGDLRPIECHLITPNLDLRVLKFPLIIKPRFGSGSRDVIAVKDQHEFKNALAKIDLSKEDFLAETLVEGT
+200 EYGLSGAVINGKYIHILIREKLLTPLPYRQSIGNLSAPEILEVTRYMQRVATRLNLKNCLINADLIITPEGEPFIIELAPRPSGHYLSSTFVEISTGVNM
+300 TKEWINMILGKPFSFEPKFTKHAIIRYFDFEGRVVPPNFEILKNELGIVKYECNINVILGKVINGASIMNRGYAIIVASNKQECLTNTDALIKKFKKEIK

[show detailed alignment]

82-40

82-40 : CFF8240_1551 [tract entry] [top]

Function: phosphoribosylglycinamide formyltransferase 2
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLRLADVSYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTNETMGGGIPSK

[show detailed alignment]

82-40 : CFF8240_1552 [tract entry] [top]

Function: hypothetical protein
+0 LITTGSINDYYKLGGVSYKAADLCTDKLLFHKKLRNLTNETMGGGVFPPSEEGDLRPIECHLITPNLDLRVLKFPLIIKPRFGSGSRDVIAVKDQHEFKN
+100 ALAKIDLSKEDFLAETLVEGTEYGLSGAVINGKYIHILIREKLLTPLPYRQSIGNLSAPEILEVTRYMQRVATRLNLKNCLINADLIITPEGEPFIIELA
+200 PRPSGHYLSSTFVEISTGVNMTKEWINMILGKPFSFEPKFTKHAIIRYFDFEGRVVPPNFEILKNELGIVKYECNINGILGKVINGASIMNRGYAIIVAS
+300 NKQECLTNTDALIKKFKKEIK

[show detailed alignment]

84-112

84-112 : CSG_16870 [tract entry] [top]

Function: hypothetical protein
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLRLADVSYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTNETMGGGIPSK

[show detailed alignment]

84-112 : CSG_16880 [tract entry] [top]

Function: hypothetical protein
+0 LITTGSINDYYKLGGVSYKAADLCTDKLLFHKKLRNLTNETMGGGVFPPSEEGDLRPIECHLITPNLDLRVLKFPLIIKPRFGSGSRDVIAVKDQHEFKN
+100 ALAKIDLSKEDFLAETLVEGTEYGLSGAVINGKYIHILIREKLLTPLPYRQSIGNLSAPEILEVTRYMQRVATRLNLKNCLINADLIITPEGEPFIIELA
+200 PRPSGHYLSSTFVEISTGVNMTKEWINMILGKPFSFEPKFTKHAIIRYFDFEGRVVPPNFEILKNELGIVKYECNINGILGKVINGASIMNRGYAIIVAS
+300 NKQECLTNTDALIKKFKKEIK

[show detailed alignment]

97/608

97/608 : CFV97608_1684 [tract entry] [top]

Function: No annotation data
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLRLADVSYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTNETMGGGYSLQVRKGI

No BLAST hits


SP3

SP3 : CFTSP3_1574 [tract entry] [top]

Function: No annotation data
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLKLADISYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTDETMGGGTLS

No BLAST hits


cfvi03/293

cfvi03/293 : CFVI03293_1574 [tract entry] [top]

Function: No annotation data
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLRLADVSYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTNETMGGGVFPPSEEGDLRPIECHLITPNLDLRVLKFPLIIKPRFGSGSRDVIAVKDQHEFKNALAKIDLSKEDFLAETLVEG
+200 TEYGLSGAVINGKYIHILIREKLLTPLPYRQSIGNLSAPEILEVTRYMQRVATRLNLKNCLINADLIITPEGEPFIIELAPRPSGHYLSSTFVEISTGVN
+300 MTKEWINMILGKPFSFEPKFTKHAIIRYFDFEGRVVPPNFEILKNELGIVKYECNINGILGKVINGASIMNRGYAIIVASNKQECLTNTDALIKKFKKEI
+400 K

[show detailed alignment]

pet-3

pet-3 : CR44_07655 [tract entry] [top]

Function: hypothetical protein
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLKLADISYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTDETMGGGTLS

[show detailed alignment]

pet-3 : CR44_07655 [tract entry] [top]

Function: hypothetical protein
+0 MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLKLADISYVVDIRDPKNIIEKLTGGGYEPITILPVPIGRYLITTGSINDYYKLGGVSYKA
+100 ADLCTDKLLFHKKLRNLTDETMGGGGLSLDKGEDLRPIECHLITPNLDSSILKFPLIIKPRFGSGSRDVIAVKNQDEFKNTLSKIDLNKEDFLAETLVEG
+200 TEYGLSGAVINGVYIHILIREKLLTPLPYRQSIGNLSASEISEVSRYMQRVATRLNLKNCLINADLIVTPEGEPFIIELAPRPSGHYLSSTFVEIATGVN
+300 MTKEWINMILSKPFSFEPKFTKHAIIRYFDFEGRVIPPNFEILKEELGIVKYECNINGVLGIVTDGASIMNRGYAIIVANNKQECLANTDALIKKFKKEI
+400 K

No BLAST hits


CCUG 27631

CCUG 27631 : CHL_0243 [tract entry] [top]

Function: No annotation data
+0 MSQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLKFADVSYVVDIRDPKNIIEKLMGGGYEPITILPVPIGRYLITTGSINDYYKLDGVSYKA
+100 ADLCTDKLLFHKKLRNLTDEKTIKTMGGGNSLLKKERI

No BLAST hits