CjjRM3196_1335 vs: Cj1318 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 2172.00 bits: 940.74 e-value: 0.000000
length: 653 gaps: 8 id: 506 positives: 552 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSEN-LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI
Cj1318 +1246678 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGI +1246975

Cj..6_1335 +101 LFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKY +200
LFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
Cj1318 +1246978 LFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKN +1247275

Cj..6_1335 +201 SIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLET +300
I+ GNDP DALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T
Cj1318 +1247278 IILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELT +1247575

Cj..6_1335 +301 SeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDE +400
+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD+
Cj1318 +1247578 AEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDD +1247875

Cj..6_1335 +401 HIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ A E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
Cj1318 +1247878 YQNSA----NYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1248175

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
Cj1318 +1248178 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1248475

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
Cj1318 +1248478 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1248634

CjjRM3196_1335 vs: Cj1333 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: PseD protein

Score: 2219.00 bits: 961.02 e-value: 0.000000
length: 667 gaps: 20 id: 511 positives: 562 coverage: 0.78 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSN+ LKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
Cj1333 +1259689 MTFTPTQKELFNKNIEALSNLFLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1259986

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+LQTSSLDIE FSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL ++FK S
Cj1333 +1259989 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILQTSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDS +1260286

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ TS
Cj1333 +1260289 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +1260586

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYAK+G SH +
Cj1333 +1260589 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKD- +1260886

Cj..6_1335 +401 IFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPL +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPL
Cj1333 +1260889 -YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1261186

Cj..6_1335 +501 SLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNL---AIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLN +600
SLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +E+ L I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLN
Cj1333 +1261189 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLN +1261486

Cj..6_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +667
PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
Cj1333 +1261489 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1261687

CjjRM3196_1335 vs: Cj1335 in NCTC 11168 (Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome.)
Gene length: 1948bp / 649aa PV: Yes
Function: motility accessory factor (function unknown)

Score: 173.00 bits: 78.44 e-value: 0.000000
length: 59 gaps: 0 id: 57 positives: 57 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj1335 +1263507 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1263681

Score: 2077.00 bits: 899.76 e-value: 0.000000
length: 596 gaps: 7 id: 455 positives: 501 coverage: 0.79 query coverage 0.77

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++
Cj1335 +1263676 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTE +1263973

Cj..6_1335 +157 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +256
CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK I+ GNDP DALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTK
Cj1335 +1263976 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNIILRNGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTK +1264273

Cj..6_1335 +257 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +356
QLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF
Cj1335 +1264276 QLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTAEFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFS +1264573

Cj..6_1335 +357 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +456
Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++ A E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + +
Cj1335 +1264576 YAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDYQNSA----NYESQMYEHILTEAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGIT +1264873

Cj..6_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +556
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KID
Cj1335 +1264876 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKID +1265173

Cj..6_1335 +557 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
EFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
Cj1335 +1265176 EFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1265461

CjjRM3196_1335 vs: CJJ81176_1336 in 81-176 (Campylobacter jejuni subsp. jejuni 81-176, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD

Score: 1652.00 bits: 716.43 e-value: 0.000000
length: 678 gaps: 27 id: 414 positives: 496 coverage: 0.63 query coverage 0.62

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKDNLDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
CJ..6_1336 +1249415 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDNLDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1249712

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +200
FKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
CJ..6_1336 +1249715 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1250012

Cj..6_1335 +201 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
CJ..6_1336 +1250015 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1250312

Cj..6_1335 +301 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
CJ..6_1336 +1250315 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1250612

Cj..6_1335 +401 PDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
+ I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF KL
CJ..6_1336 +1250615 AKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKL +1250912

Cj..6_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +600
PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARI
CJ..6_1336 +1250915 NPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARI +1251212

Cj..6_1335 +601 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +678
YVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
CJ..6_1336 +1251215 YVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1251446

CjjRM3196_1335 vs: A911_06490 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 2276.00 bits: 985.61 e-value: 0.000000
length: 652 gaps: 7 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
A911_06490 +1262965 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1263262

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
A911_06490 +1263265 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1263562

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
A911_06490 +1263565 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1263862

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
A911_06490 +1263865 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1264162

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
A911_06490 +1264165 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1264462

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
A911_06490 +1264465 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1264762

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A911_06490 +1264765 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1264918

CjjRM3196_1335 vs: A911_06480 in PT14 (Campylobacter jejuni subsp. jejuni PT14, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2234.00 bits: 967.49 e-value: 0.000000
length: 664 gaps: 17 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
A911_06480 +1259156 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1259453

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
A911_06480 +1259456 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1259753

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
A911_06480 +1259756 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1260053

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
A911_06480 +1260056 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1260353

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
A911_06480 +1260356 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1260653

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
A911_06480 +1260656 KQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1260953

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
A911_06480 +1260956 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1261145

CjjRM3196_1335 vs: PJ16_07340 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2235.00 bits: 967.92 e-value: 0.000000
length: 652 gaps: 9 id: 514 positives: 561 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ16_07340 +1354370 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1354667

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RL+VL T L+I+ + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
PJ16_07340 +1354670 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1354967

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ16_07340 +1354970 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1355267

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD++
PJ16_07340 +1355270 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +1355567

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+E W F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
PJ16_07340 +1355570 QNSA----NYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1355867

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKID FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
PJ16_07340 +1355870 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1356167

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ16_07340 +1356170 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1356323

CjjRM3196_1335 vs: PJ16_07410 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2219.00 bits: 961.02 e-value: 0.000000
length: 666 gaps: 17 id: 510 positives: 559 coverage: 0.79 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
PJ16_07410 +1367385 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1367682

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
PJ16_07410 +1367685 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1367982

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ16_07410 +1367985 IISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1368282

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
PJ16_07410 +1368285 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1368582

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
PJ16_07410 +1368585 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1368882

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
PJ16_07410 +1368885 KQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1369182

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFFKK +666
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF K
PJ16_07410 +1369185 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFFLK +1369380

CjjRM3196_1335 vs: PJ16_07420 in 00-0949 (Campylobacter jejuni subsp. jejuni strain 00-0949, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2314.00 bits: 1002.00 e-value: 0.000000
length: 671 gaps: 17 id: 537 positives: 576 coverage: 0.82 query coverage 0.81

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFIPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ16_07420 +1371194 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1371491

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
PJ16_07420 +1371494 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1371791

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ TS
PJ16_07420 +1371794 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1372091

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP--- +400
EFFNNDF EFDKDV FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
PJ16_07420 +1372094 EFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1372391

Cj..6_1335 +401 ---DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLE +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLE
PJ16_07420 +1372394 KNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQNT---ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLE +1372691

Cj..6_1335 +501 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPK +600
PLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPK
PJ16_07420 +1372694 PLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPK +1372991

Cj..6_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +671
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
PJ16_07420 +1372994 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1373204

CjjRM3196_1335 vs: PJ17_06980 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2276.00 bits: 985.61 e-value: 0.000000
length: 652 gaps: 7 id: 516 positives: 561 coverage: 0.80 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ17_06980 +1346475 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1346772

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
PJ17_06980 +1346775 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1347072

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ17_06980 +1347075 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1347372

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ FV HP +YL+ + F++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
PJ17_06980 +1347375 EFFNHDFGEFDKDIVFVCAGVVHPKAIEYLK--GKTFIITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1347672

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
PJ17_06980 +1347675 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1347972

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
PJ17_06980 +1347975 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1348272

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWME+V
PJ17_06980 +1348275 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMEKV +1348428

CjjRM3196_1335 vs: PJ17_07050 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2167.00 bits: 938.59 e-value: 0.000000
length: 667 gaps: 20 id: 504 positives: 554 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F PTQKELFNKNIE+LSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
PJ17_07050 +1359494 MIFTPTQKELFNKNIESLSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1359791

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T +I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL ++FK S
PJ17_07050 +1359794 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDS +1360091

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ TS
PJ17_07050 +1360094 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +1360391

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYAK+G SH +
PJ17_07050 +1360394 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKD- +1360691

Cj..6_1335 +401 IFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPL +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPL
PJ17_07050 +1360694 -YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPL +1360991

Cj..6_1335 +501 SLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNL---AIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLN +600
SLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +E+ L I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLN
PJ17_07050 +1360994 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENETLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLN +1361291

Cj..6_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +667
PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
PJ17_07050 +1361294 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1361492

CjjRM3196_1335 vs: PJ17_07060 in 00-1597 (Campylobacter jejuni subsp. jejuni strain 00-1597, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2270.00 bits: 983.02 e-value: 0.000000
length: 652 gaps: 9 id: 519 positives: 563 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ17_07060 +1363312 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1363609

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHIL+FS ELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
PJ17_07060 +1363612 FKALLQNKNHQHIVVFEKDIEIIWIMFHILNFSSELQSARLMVLENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1363909

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ17_07060 +1363912 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1364209

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
PJ17_07060 +1364212 EFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLSHKNIIFIGQDLAYAENGNSHPDDY +1364509

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
PJ17_07060 +1364512 QNSA----NYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1364809

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
PJ17_07060 +1364812 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1365109

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ17_07060 +1365112 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1365265

CjjRM3196_1335 vs: N135_01421 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2234.00 bits: 967.49 e-value: 0.000000
length: 664 gaps: 17 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N135_01421 +1337388 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1337685

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N135_01421 +1337688 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1337985

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N135_01421 +1337988 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1338285

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
N135_01421 +1338288 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1338585

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N135_01421 +1338588 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1338885

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
N135_01421 +1338888 KQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1339185

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N135_01421 +1339188 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1339377

CjjRM3196_1335 vs: N135_01423 in 00-2425 (Campylobacter jejuni subsp. jejuni 00-2425, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2276.00 bits: 985.61 e-value: 0.000000
length: 652 gaps: 7 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N135_01423 +1341197 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1341494

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N135_01423 +1341497 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1341794

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N135_01423 +1341797 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1342094

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
N135_01423 +1342097 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1342394

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N135_01423 +1342397 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1342694

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
N135_01423 +1342697 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1342994

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N135_01423 +1342997 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1343150

CjjRM3196_1335 vs: N564_02285 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2234.00 bits: 967.49 e-value: 0.000000
length: 664 gaps: 17 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N564_02285 +1299219 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1299516

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N564_02285 +1299519 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1299816

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N564_02285 +1299819 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1300116

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
N564_02285 +1300119 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1300416

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N564_02285 +1300419 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1300716

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
N564_02285 +1300719 KQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1301016

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N564_02285 +1301019 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1301208

CjjRM3196_1335 vs: N564_02295 in 00-2426 (Campylobacter jejuni subsp. jejuni 00-2426, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2276.00 bits: 985.61 e-value: 0.000000
length: 652 gaps: 7 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N564_02295 +1303028 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1303325

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N564_02295 +1303328 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1303625

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N564_02295 +1303628 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1303925

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
N564_02295 +1303928 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1304225

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N564_02295 +1304228 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1304525

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
N564_02295 +1304528 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1304825

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N564_02295 +1304828 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1304981

CjjRM3196_1335 vs: N565_02385 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2276.00 bits: 985.61 e-value: 0.000000
length: 652 gaps: 7 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N565_02385 +1341584 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1341881

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N565_02385 +1341884 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1342181

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N565_02385 +1342184 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1342481

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
N565_02385 +1342484 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1342781

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N565_02385 +1342784 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1343081

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
N565_02385 +1343084 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1343381

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N565_02385 +1343384 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1343537

CjjRM3196_1335 vs: N565_02375 in 00-2538 (Campylobacter jejuni subsp. jejuni 00-2538, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2234.00 bits: 967.49 e-value: 0.000000
length: 664 gaps: 17 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N565_02375 +1337775 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1338072

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N565_02375 +1338075 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1338372

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N565_02375 +1338375 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1338672

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
N565_02375 +1338675 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1338972

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N565_02375 +1338975 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1339272

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
N565_02375 +1339275 KQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1339572

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N565_02375 +1339575 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1339764

CjjRM3196_1335 vs: N755_02445 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2276.00 bits: 985.61 e-value: 0.000000
length: 652 gaps: 7 id: 515 positives: 563 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
N755_02445 +1341567 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1341864

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N755_02445 +1341867 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1342164

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N755_02445 +1342167 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1342464

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
N755_02445 +1342467 EFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1342764

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N755_02445 +1342767 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1343064

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
N755_02445 +1343067 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1343364

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N755_02445 +1343367 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1343520

CjjRM3196_1335 vs: N755_02435 in 00-2544 (Campylobacter jejuni subsp. jejuni 00-2544, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2234.00 bits: 967.49 e-value: 0.000000
length: 664 gaps: 17 id: 507 positives: 560 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
N755_02435 +1337758 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1338055

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK
N755_02435 +1338058 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNI +1338355

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N755_02435 +1338358 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERKAITA +1338655

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
N755_02435 +1338658 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1338955

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
N755_02435 +1338958 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +1339255

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
N755_02435 +1339258 KQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1339555

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N755_02435 +1339558 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1339747

CjjRM3196_1335 vs: PJ18_06860 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2226.00 bits: 964.04 e-value: 0.000000
length: 666 gaps: 9 id: 511 positives: 558 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ18_06860 +1302529 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1302826

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
PJ18_06860 +1302829 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1303126

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ18_06860 +1303129 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1303426

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF+EFD+D+ F+ HP +YL+ RN ++ Y+ L DF Y +GFSVAHM YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
PJ18_06860 +1303429 EFFNHDFREFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDY +1303726

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYG + V T+ +W LF+N FE ++ + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
PJ18_06860 +1303729 QNSA----NYESQMYEHILTKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1304026

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKEDA
PJ18_06860 +1304029 KQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDA +1304326

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +666
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
PJ18_06860 +1304329 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1304524

CjjRM3196_1335 vs: PJ18_06850 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2264.00 bits: 980.43 e-value: 0.000000
length: 663 gaps: 15 id: 520 positives: 565 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
PJ18_06850 +1298720 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1299017

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
PJ18_06850 +1299020 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1299317

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ18_06850 +1299320 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1299617

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF+EFDKD+ F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD++
PJ18_06850 +1299620 EFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1299917

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLNK
PJ18_06850 +1299920 QNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNK +1300217

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTK
PJ18_06850 +1300220 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1300517

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
PJ18_06850 +1300520 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1300706

CjjRM3196_1335 vs: PJ18_06785 in 00-6200 (Campylobacter jejuni subsp. jejuni strain 00-6200, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2260.00 bits: 978.70 e-value: 0.000000
length: 653 gaps: 7 id: 515 positives: 558 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ18_06785 +1284798 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1285095

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
PJ18_06785 +1285098 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1285395

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ TS
PJ18_06785 +1285398 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1285695

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
PJ18_06785 +1285698 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1285995

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
PJ18_06785 +1285998 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1286295

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
PJ18_06785 +1286298 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1286595

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ18_06785 +1286598 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1286754

CjjRM3196_1335 vs: PJ19_07340 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: PseD protein

Score: 2235.00 bits: 967.92 e-value: 0.000000
length: 652 gaps: 9 id: 514 positives: 561 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF QKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
PJ19_07340 +1352981 MTFTHAQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1353278

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RL+VL T L+I+ + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
PJ19_07340 +1353281 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNARLIVLNTNKLEIQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1353578

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ19_07340 +1353581 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1353878

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD++
PJ19_07340 +1353881 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +1354178

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+E W F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
PJ19_07340 +1354181 QNSA----NYESQMYEHILTEAYGGKKEIKTHEFWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1354478

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKID FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
PJ19_07340 +1354481 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDGFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1354778

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
PJ19_07340 +1354781 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1354934

CjjRM3196_1335 vs: PJ19_07420 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2314.00 bits: 1002.00 e-value: 0.000000
length: 671 gaps: 17 id: 537 positives: 576 coverage: 0.82 query coverage 0.81

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFIPTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
PJ19_07420 +1369805 MTFIPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1370102

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
PJ19_07420 +1370105 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1370402

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ TS
PJ19_07420 +1370405 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1370702

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP--- +400
EFFNNDF EFDKDV FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
PJ19_07420 +1370705 EFFNNDFGEFDKDVLFVCISWIYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1371002

Cj..6_1335 +401 ---DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLE +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLE
PJ19_07420 +1371005 KNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQNT---ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLE +1371302

Cj..6_1335 +501 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPK +600
PLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPK
PJ19_07420 +1371305 PLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPK +1371602

Cj..6_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +671
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
PJ19_07420 +1371605 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1371815

CjjRM3196_1335 vs: PJ19_07410 in 01-1512 (Campylobacter jejuni subsp. jejuni strain 01-1512, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2219.00 bits: 961.02 e-value: 0.000000
length: 666 gaps: 17 id: 510 positives: 559 coverage: 0.79 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
PJ19_07410 +1365996 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1366293

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
PJ19_07410 +1366296 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1366593

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
PJ19_07410 +1366596 IISHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1366893

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
PJ19_07410 +1366896 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1367193

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y L T AYGG+ + T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
PJ19_07410 +1367196 ----QNSASYESRRYPHLYTLAYGGKEKIKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1367493

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
PJ19_07410 +1367496 KQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1367793

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFFKK +666
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF K
PJ19_07410 +1367796 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFFLK +1367991

CjjRM3196_1335 vs: JJD26997_0374 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1950bp / 650aa PV: Yes
Function: motility accessory factor

Score: 2595.00 bits: 1123.21 e-value: 0.000000
length: 665 gaps: 6 id: 573 positives: 607 coverage: 0.88 query coverage 0.86

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFIPTQKELFNKNIEALSN+ LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGIL
JJ..7_0374 +331842 MTFIPTQKELFNKNIEALSNVFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGIL +332139

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+L+ L + + CSSKPFFQFSRIYFLEL+SHYYERFHED+L +N KLAE FK
JJ..7_0374 +331542 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAETFKKV +331839

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ HGND DALQGIEQFVYNLPSMITHPSY+ELLAKRK LSDTAIIVSTGPSLTKQLPLLKKYASKAT+FCADSAYPILAK+G++PDYVLSLERVLETS
JJ..7_0374 +331242 ILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTKQLPLLKKYASKATLFCADSAYPILAKQGIRPDYVLSLERVLETS +331539

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDFKEFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYA FINYLKLDDFGYF MGFSVA MAY+L+L L++KNII IGQDLAY+K+G SHPDEH
JJ..7_0374 +330942 EFFNNDFKEFDKDILFVLKSYAHPHTTKYLQKNNRNFMLVSTYANFINYLKLDDFGYFTMGFSVANMAYHLALLLQYKNIILIGQDLAYSKDGSSHPDEH +331239

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
IFG LDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFR IFEQD+ + YNCTEGGARIEG IEKPFLWACENLL KDL+KPFEKLEPLSL K
JJ..7_0374 +330642 IFGTLDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRSIFEQDITNYH----IPTYNCTEGGARIEGAIEKPFLWACENLLAKDLNKPFEKLEPLSLKK +330939

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAF +600
QNEFLLKAYYKVC+SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAI KIDEFKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED F
JJ..7_0374 +330342 QNEFLLKAYYKVCQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKIDEFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVF +330639

Cj..6_1335 +601 NKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +665
NKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+K MERV +R KK S
JJ..7_0374 +330042 NKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERVRR*EKRKLILKKIS +330234

CjjRM3196_1335 vs: JJD26997_0376 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: motility accessory factor

Score: 2175.00 bits: 942.04 e-value: 0.000000
length: 669 gaps: 29 id: 504 positives: 547 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF TQKELFNKNIEAL NI LKESLK+IKSSKFELILGKD LDINLK+TS L+++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+L
JJ..7_0376 +335639 MTF--TQKELFNKNIEALGNIFLKESLKQIKSSKFELILGKDKLDINLKNTS--------DNTFLHENVINELNSMLNTYNDKYLLYPVLYFYGFGNGVL +335936

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
JJ..7_0376 +335339 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +335636

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRK LSDTAIIVSTGPSL KQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER T+
JJ..7_0376 +335039 ILSHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKHLSDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSAYPILAKHNIKPDYVCMLERSEFTA +335336

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F++KS HP YL K +F LVSTYASFINY+KLDDFGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD++
JJ..7_0376 +334739 EFFNHDFGEFDKDICFIIKSVVHPNAIHYLNKKTDDFTLVSTYASFINYVKLDDFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +335036

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A K + T AYGG+G V T+ +W +F+ EQDVEKIQKYLDTKVYNCTEGGARIEG IEKPFLWACENLL KDL+KPFEKLEPLSL K
JJ..7_0376 +334439 QNSATYESKAHE---PILTKAYGGKGEVKTHHIWLMFKQNLEQDVEKIQKYLDTKVYNCTEGGARIEGAIEKPFLWACENLLGKDLNKPFEKLEPLSLKK +334736

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLA----------IEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYV +600
QNEFLLKAYYKVCKSI+HCRDF ++ I+ ++SL +E+ L +IDE N +DL +ILGPLLTQFELNLARIYV
JJ..7_0376 +334139 QNEFLLKAYYKVCKSIEHCRDFNDKFIKSYKKIKNSFMSLQNSQENEILVKKIIKNIDKIKTQIDELYN------TQKDLIQILGPLLTQFELNLARIYV +334436

Cj..6_1335 +601 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +669
LNPKTKED FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKLNKWMERV FF
JJ..7_0376 +333839 LNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLNKWMERVRR*ERNFF +334043

CjjRM3196_1335 vs: JJD26997_0396 in 269.97 (Campylobacter jejuni subsp. doylei 269.97, complete genome.)
Gene length: 1933bp / 644aa PV: Yes
Function: No annotation data

Score: 172.00 bits: 78.01 e-value: 0.000000
length: 59 gaps: 0 id: 55 positives: 56 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTF PTQKELFNKNIEALSNI LKESLK+IKSSKFELILGKD LDINLKDTSIKNNGGG
JJ..7_0396 +352487 MTFTPTQKELFNKNIEALSNIFLKESLKQIKSSKFELILGKDKLDINLKDTSIKNNGGG +352661

Score: 2083.00 bits: 902.35 e-value: 0.000000
length: 596 gaps: 11 id: 457 positives: 508 coverage: 0.79 query coverage 0.77

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGYSENLLYQDPIKELQTMLNTY DKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+L+ L + +
JJ..7_0396 +352318 GGGYSENLLYQDPIKELQTMLNTYSDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMILENDKLQTQDYNE +352615

Cj..6_1335 +157 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +256
CSSKPFFQFSRIYFLEL+SHYYERFHED+L +N KLAENFK I+ HGND DALQGIEQFVYNLPSMITHPSY+ELLAKRK LSDTAIIVSTGPSLTK
JJ..7_0396 +352018 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLKINHKLAENFKKVILMHGNDSTDALQGIEQFVYNLPSMITHPSYEELLAKRKHLSDTAIIVSTGPSLTK +352315

Cj..6_1335 +257 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +356
QLPLLKKYASKAT+FCADSAYPILAK+G++PDYV LER T+EFFN DF EFD+D+ F+ HP +YL+ RN ++ +F Y+ L DF
JJ..7_0396 +351718 QLPLLKKYASKATLFCADSAYPILAKQGIRPDYVCMLERTDFTAEFFNHDFGEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLTFPYYINLKDFS +352015

Cj..6_1335 +357 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +456
Y +GFSVAHM+Y+LS+ L HKNII IGQDLAYAKNGNSHPD++ + E+ +Y+ + T AYGG+G V T+EVW F+ + E + I+ + T
JJ..7_0396 +351418 YAAVGFSVAHMSYFLSVLLNHKNIILIGQDLAYAKNGNSHPDDY----QNSATYESQTYEPILTKAYGGKGEVKTHEVWIFFKQMLETMI--IEYSIPT- +351715

Cj..6_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +556
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL KQNEFLLKAYYKVCKSI+HC+DFSKILS+DFENIQSIYLSLNEKEE LNLAI KID
JJ..7_0396 +351118 -YNCTEGGARIEGTIEKPFLWACENLLAKDLNKPFEKLEPLSLKKQNEFLLKAYYKVCKSIEHCKDFSKILSNDFENIQSIYLSLNEKEEYLNLAIRKID +351415

Cj..6_1335 +557 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
EFKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+K MERV
JJ..7_0396 +350818 EFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDVFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKGMERV +351103

CjjRM3196_1335 vs: BN867_13180 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1974bp / 658aa PV: Yes
Function: Motility accessory factor

Score: 2333.00 bits: 1010.19 e-value: 0.000000
length: 667 gaps: 12 id: 530 positives: 578 coverage: 0.81 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
BN.._13180 +1295983 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1296280

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFH+DILGLNKKLAENFK S
BN.._13180 +1296283 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNS +1296580

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK++SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ TS
BN.._13180 +1296583 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1296880

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAY K+G SH +
BN.._13180 +1296883 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYTKDGLSHTKD- +1297180

Cj..6_1335 +401 IFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPL +500
+ LD +++ Y T AYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPL
BN.._13180 +1297183 -YSNLDKHEGHFQRDKNKY--TTQAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +1297480

Cj..6_1335 +501 SLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLN +600
SLNKQNEFLLKAYYKV +SIKHCRDF + I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLN
BN.._13180 +1297483 SLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYNKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLN +1297780

Cj..6_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +667
PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEK+KERKL+KWMERV FF
BN.._13180 +1297783 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR*ERNFF +1297981

CjjRM3196_1335 vs: BN867_13200 in 4031 (Campylobacter jejuni 4031 genome sequence.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 2328.00 bits: 1008.04 e-value: 0.000000
length: 663 gaps: 8 id: 529 positives: 572 coverage: 0.82 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
BN.._13200 +1299825 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1300122

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFH+DILGLNKKLAENFK S
BN.._13200 +1300125 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHKDILGLNKKLAENFKNS +1300422

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK++SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
BN.._13200 +1300425 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKDISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1300722

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ FV HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
BN.._13200 +1300725 EFFNHDFGEFDKDIIFVCAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLNHKNIIFIGQDLAYAENGNSHPDDY +1301022

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + +D YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
BN.._13200 +1301025 QNSA----TYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMDITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1301322

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
BN.._13200 +1301325 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1301622

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG-ERGTFFKK +663
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEK+KERKL+KWMERV ER K
BN.._13200 +1301625 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKIKERKLDKWMERVRR*ERKIILTK +1301811

CjjRM3196_1335 vs: M635_02360 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2157.00 bits: 934.27 e-value: 0.000000
length: 667 gaps: 20 id: 500 positives: 556 coverage: 0.77 query coverage 0.75

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
M635_02360 +444737 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +445034

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLM+L T +I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKL ++FK S
M635_02360 +445037 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQSARLMILNTNKPEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQDFKDS +445334

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ TS
M635_02360 +445337 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +445634

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYAK+G SH +
M635_02360 +445637 EFFNNDFGEFDKDIVFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAKDGLSHTKD- +445934

Cj..6_1335 +401 IFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPL +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPL
M635_02360 +445937 -YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPL +446234

Cj..6_1335 +501 SLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLN +600
SLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLN
M635_02360 +446237 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLN +446534

Cj..6_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +667
PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV + +FF
M635_02360 +446537 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*KKSFF +446735

CjjRM3196_1335 vs: M635_02285 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1776bp / 592aa PV: Yes
Function: PseD protein

Score: 2108.00 bits: 913.13 e-value: 0.000000
length: 596 gaps: 9 id: 467 positives: 510 coverage: 0.79 query coverage 0.70

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ +
M635_02285 +431889 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNE +432186

Cj..6_1335 +157 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +256
CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTK
M635_02285 +432189 LCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTK +432486

Cj..6_1335 +257 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +356
QLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKDV FV HP +YL+ NR +++ Y F Y+KL F
M635_02285 +432489 QLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDVLFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFD +432786

Cj..6_1335 +357 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +456
+ SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD++ + E Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T
M635_02285 +432789 FLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY----QNSANYENQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT- +433086

Cj..6_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +556
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEE LNLAIEKID
M635_02285 +433089 -YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEYLNLAIEKID +433386

Cj..6_1335 +557 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
M635_02285 +433389 KFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +433674

CjjRM3196_1335 vs: M635_02370 in 32488 (Campylobacter jejuni 32488, complete sequence.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2178.00 bits: 943.33 e-value: 0.000000
length: 653 gaps: 17 id: 506 positives: 552 coverage: 0.79 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
M635_02370 +448555 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +448852

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFS ELQ +RLM+L TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
M635_02370 +448855 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSSELQSARLMILNTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +449152

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ TS
M635_02370 +449155 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHNIKPDYVLSLERIPLTS +449452

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL +KNIIFIGQDLAYA++G SH +
M635_02370 +449455 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAIGFSVAHMAYEFATHLNYKNIIFIGQDLAYAEDGFSHTKD- +449752

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
M635_02370 +449755 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +450052

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL LL QFELNLARIYVLNPKTKED
M635_02370 +450055 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKED +450352

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
M635_02370 +450355 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +450511

CjjRM3196_1335 vs: UC78_1278 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2331.00 bits: 1009.33 e-value: 0.000000
length: 653 gaps: 7 id: 531 positives: 569 coverage: 0.82 query coverage 0.80

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
UC78_1278 +1249144 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1249441

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+S YYERFHEDILGLNKKLAE FK
UC78_1278 +1249444 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNI +1249741

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH +KPDYVLSLER+ TS
UC78_1278 +1249744 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1250041

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDK+V FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY S HL KNIIFIGQDLAYAK+G SH +
UC78_1278 +1250044 EFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKD- +1250341

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
UC78_1278 +1250344 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1250641

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED
UC78_1278 +1250644 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +1250941

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
FNK ILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
UC78_1278 +1250944 VFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1251100

CjjRM3196_1335 vs: UC78_1267 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2461.00 bits: 1065.41 e-value: 0.000000
length: 652 gaps: 5 id: 550 positives: 584 coverage: 0.84 query coverage 0.82

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
UC78_1267 +1234947 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1235244

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+S YYERFHEDILGLNKKLAE FK
UC78_1267 +1235247 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAETFKNI +1235544

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH +KPDYV LER T+
UC78_1267 +1235547 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVCMLERKAITA +1235844

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
UC78_1267 +1235847 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1236144

Cj..6_1335 +401 IFGALDGEKKETISY-DLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y L T AYGG+ + T+ VW +F+ EQDV+KIQKYLD K+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
UC78_1267 +1236147 QNSA----SYESRRYPHLYTLAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDAKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1236444

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEILGPLLTQFELNLARIYVLNPKTKED
UC78_1267 +1236447 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDV +1236744

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNK ILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
UC78_1267 +1236747 FNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1236900

CjjRM3196_1335 vs: UC78_1276 in 35925B2 (Campylobacter jejuni subsp. jejuni strain 35925B2, complete genome.)
Gene length: 1968bp / 656aa PV: Yes
Function: hypothetical protein

Score: 2170.00 bits: 939.88 e-value: 0.000000
length: 665 gaps: 11 id: 502 positives: 554 coverage: 0.77 query coverage 0.75

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY E+LLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
UC78_1276 +1245311 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNEDLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1245608

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+TSSLDIEFFSNFCSSKPFFQFSRIYFLEL+S YYERFHEDILGLNKKLAENFK S
UC78_1276 +1245611 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLETSSLDIEFFSNFCSSKPFFQFSRIYFLELMSNYYERFHEDILGLNKKLAENFKNS +1245908

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKH +KPDYVLSLER+ TS
UC78_1276 +1245911 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1246208

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDK+V FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY S HL KNIIFIGQDLAYAK+G SH +
UC78_1276 +1246211 EFFNNDFGEFDKNVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFSTHLSCKNIIFIGQDLAYAKDGFSHTKD- +1246508

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
UC78_1276 +1246511 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1246808

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPK +600
NKQNEFLLKAYYKVCKSI+HCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPK
UC78_1276 +1246811 NKQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPK +1247108

Cj..6_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKED FNK ILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
UC78_1276 +1247111 TKEDVFNKNILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1247303

CjjRM3196_1335 vs: C8J_1253 in 81116; NCTC 11828 (Campylobacter jejuni subsp. jejuni 81116, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1645.00 bits: 713.41 e-value: 0.000000
length: 678 gaps: 27 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
C8J_1253 +1261837 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1262134

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +200
FKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
C8J_1253 +1262137 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1262434

Cj..6_1335 +201 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
C8J_1253 +1262437 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1262734

Cj..6_1335 +301 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
C8J_1253 +1262737 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1263034

Cj..6_1335 +401 PDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
+ I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF KL
C8J_1253 +1263037 AKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKL +1263334

Cj..6_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +600
PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARI
C8J_1253 +1263337 NPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARI +1263634

Cj..6_1335 +601 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +678
YVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
C8J_1253 +1263637 YVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1263868

CjjRM3196_1335 vs: CJ8421_06665 in CG8421 (Campylobacter jejuni subsp. jejuni CG8421, complete genome.)
Gene length: 1938bp / 646aa PV: No
Function: motility accessory factor

Score: 2259.00 bits: 978.27 e-value: 0.000000
length: 653 gaps: 12 id: 525 positives: 569 coverage: 0.81 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFIPTQKELFNKNIEAL NILLKESLK+IKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLY YGFGNGIL
CJ.._06665 +1261511 MTFIPTQKELFNKNIEALGNILLKESLKKIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYLYGFGNGIL +1261808

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
CJ.._06665 +1261811 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1262108

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ TS
CJ.._06665 +1262111 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1262408

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MG SVA M+Y L+ +L +KNII IGQDLAYAK+G SH +
CJ.._06665 +1262411 EFFNNDFGEFDKDIMFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGKSVANMSYLLTEYLNYKNIILIGQDLAYAKDGFSHTKD- +1262708

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + E+W +FR IFE D+ QK + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSL
CJ.._06665 +1262711 -YKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSEIWTMFRLIFENDINYFQKLFNITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSL +1263008

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSI+HCRDFSKILS+DF+ IQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
CJ.._06665 +1263011 NKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFKKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1263308

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJ.._06665 +1263311 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1263467

CjjRM3196_1335 vs: RC25_06245 in CJ677CC519 (Campylobacter jejuni strain CJ677CC519, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1655.00 bits: 717.73 e-value: 0.000000
length: 677 gaps: 25 id: 415 positives: 497 coverage: 0.63 query coverage 0.62

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLK+T LY + I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
RC25_06245 +1195347 MKFNLNQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKNTN--------DNTFLYGNVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1195644

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFK +200
FKALLQNKNHQHIVVFEKDIEIIW+MFHILDFSNELQK L+++ T L SNF + F QFSRIYFLELIS YYER+ E+IL LN + K
RC25_06245 +1195647 FKALLQNKNHQHIVVFEKDIEIIWVMFHILDFSNELQKNNLIIINTNILSEFDLSNFYKKANSIFLQFSRIYFLELISNYYERYNEEILKLNNTILSTIK +1195944

Cj..6_1335 +201 YSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLE +300
SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
RC25_06245 +1195947 ISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPYSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDDI +1196244

Cj..6_1335 +301 TSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
RC25_06245 +1196247 VSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHA +1196544

Cj..6_1335 +401 DEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLE +500
+ I L +G +K E + +TAYGG+ V + WNLFR +FE + + +++ +YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL
RC25_06245 +1196547 KDFIHEKLHEGHFQKDENL---FTSTAYGGKDKVESSYFWNLFRELFETWISYDKNFIN--IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLN +1196844

Cj..6_1335 +501 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIY +600
PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARIY
RC25_06245 +1196847 PLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDIVKYQIDDAKNMQDLYEILGPLLVQFELNLARIY +1197144

Cj..6_1335 +601 VLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +677
VLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KL+ERK+ K++ER++ F KK+ S+
RC25_06245 +1197147 VLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLEERKMQKYLERIKNANK*NF*KKFRSY +1197375

CjjRM3196_1335 vs: CJM1cam_1292 in CJM1cam (Campylobacter jejuni strain CJM1cam, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor Maf-3/PseD

Score: 1645.00 bits: 713.41 e-value: 0.000000
length: 678 gaps: 27 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
CJ..m_1292 +1256137 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1256434

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +200
FKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
CJ..m_1292 +1256437 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1256734

Cj..6_1335 +201 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
CJ..m_1292 +1256737 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1257034

Cj..6_1335 +301 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
CJ..m_1292 +1257037 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1257334

Cj..6_1335 +401 PDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
+ I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF KL
CJ..m_1292 +1257337 AKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKL +1257634

Cj..6_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +600
PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARI
CJ..m_1292 +1257637 NPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARI +1257934

Cj..6_1335 +601 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +678
YVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
CJ..m_1292 +1257937 YVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1258168

CjjRM3196_1335 vs: CJH_06700 in F38011 (Campylobacter jejuni subsp. jejuni F38011, complete genome.)
Gene length: 1962bp / 654aa PV: Yes
Function: PseD protein

Score: 1736.00 bits: 752.67 e-value: 0.000000
length: 662 gaps: 16 id: 396 positives: 496 coverage: 0.61 query coverage 0.59

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F Q LFNKN+++L N LKE LKE+ + +ELILGKDNLDINLKDT LYQD IKEL ML TYN+KYLLYPVLYFYGFGNGIL
CJH_06700 +1267863 MKFNKNQTILFNKNLDSLNNPTLKEKLKELSITHYELILGKDNLDINLKDTK--------NHTFLYQDSIKELDIMLKTYNEKYLLYPVLYFYGFGNGIL +1268160

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALL+NK H+H+V+FEK++EII IMFH+LDFS EL++ RL++L SL+ + + + CS+ PFF+FSR YFLEL S YYE+ +E+IL LN L + FK +
CJH_06700 +1268163 FKALLKNKHHKHLVIFEKELEIIKIMFHLLDFSQELEENRLLILDVNSLEFQDYYDLCSTSPFFEFSRTYFLELSSDYYEKDQEEILNLNNNLMDRFKNT +1268460

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDP DALQGIEQ +YNLP ++TH Y+ LL +R+NLSDTAIIVSTGPSL KQL LK+YA KATI AD++YPILAKHG+KPDYVLSLER+L TS
CJH_06700 +1268463 ILLKGNDPKDALQGIEQLIYNLPVLLTHAPYQNLLKQRENLSDTAIIVSTGPSLAKQLDTLKQYANKATIIAADASYPILAKHGIKPDYVLSLERILSTS +1268760

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
+FF+N+F +FDKD+ F+ THP+T K L+ NNRNF+L + FI YLKL FG F G SVA +AY L++ LKHKNIIFIGQDLAYA++G SHP EH
CJH_06700 +1268763 KFFDNNFGDFDKDILFITTHLTHPQTIKKLKNNNRNFLLSYKGSEFIYYLKLKQFGEFVEGHSVANIAYGLAVFLKHKNIIFIGQDLAYAEDGSSHPSEH +1269060

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
I+G D K I+Y L+T AYGG+ +VYT+E WN+FR I E+ + + ++ YNCTEGGARIEG IEKPF CE LL +DL KPF K+E L +K
CJH_06700 +1269063 IYGNYDAVDKNKITYHLKTLAYGGKNMVYTKEAWNVFRGILEKHISQTKRLKLCTTYNCTEGGARIEGAIEKPFKELCETLLKEDLKKPFPKVEALNKDK +1269360

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFS-KILS------DDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
Q+E LLK+YYK+ KSIKHC+DFS K+L + F N+ I LNE ++ LN I++ID+ K KLED + M DLYEILGPLLTQFELNLARIYVLNP
CJH_06700 +1269363 QDELLLKSYYKIYKSIKHCKDFSDKLLKSYNHILESFSNLNLIS-NLNEGKKILNYLIQEIDKIKFKLEDGKNMLDLYEILGPLLTQFELNLARIYVLNP +1269660

Cj..6_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGER +662
KT ED++NKS+LW+KEH+EF ++VY +IKAQE ALI+NI PLE +L +R L K+ +++ +
CJH_06700 +1269663 KTPEDSYNKSLLWVKEHIEFFDMVYEYIKAQEKALIENITPLENELTQRNLEKYKRKIKNAK +1269846

CjjRM3196_1335 vs: CJSA_1271 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2249.00 bits: 973.96 e-value: 0.000000
length: 667 gaps: 9 id: 517 positives: 560 coverage: 0.79 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
CJSA_1271 +1268710 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1269007

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
CJSA_1271 +1269010 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1269307

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ TS
CJSA_1271 +1269310 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1269607

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
CJSA_1271 +1269610 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1269907

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
CJSA_1271 +1269910 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1270207

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
CJSA_1271 +1270210 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1270507

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +667
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
CJSA_1271 +1270510 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1270708

CjjRM3196_1335 vs: CJSA_1256 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2248.00 bits: 973.53 e-value: 0.000000
length: 653 gaps: 7 id: 513 positives: 555 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
CJSA_1256 +1250980 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1251277

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
CJSA_1256 +1251280 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1251577

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ TS
CJSA_1256 +1251580 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1251877

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
CJSA_1256 +1251880 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1252177

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
CJSA_1256 +1252180 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1252477

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
CJSA_1256 +1252480 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1252777

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJSA_1256 +1252780 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1252936

CjjRM3196_1335 vs: CJSA_1269 in IA3902 (Campylobacter jejuni subsp. jejuni IA3902, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2264.00 bits: 980.43 e-value: 0.000000
length: 663 gaps: 15 id: 520 positives: 565 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
CJSA_1269 +1264901 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1265198

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
CJSA_1269 +1265201 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1265498

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
CJSA_1269 +1265501 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1265798

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF+EFDKD+ F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD++
CJSA_1269 +1265801 EFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1266098

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLNK
CJSA_1269 +1266101 QNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNK +1266398

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTK
CJSA_1269 +1266401 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1266698

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
CJSA_1269 +1266701 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1266887

CjjRM3196_1335 vs: ICDCCJ07001_1265 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 1437bp / 479aa PV: No
Function: Protein of unknown function family

Score: 2412.00 bits: 1044.27 e-value: 0.000000
length: 514 gaps: 0 id: 514 positives: 514 coverage: 1.07 query coverage 0.77

Cj..6_1335 +153 FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP +252
FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP
IC..1_1265 +1288417 FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGP +1288714

Cj..6_1335 +253 SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL +352
SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL
IC..1_1265 +1288717 SLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKL +1289014

Cj..6_1335 +353 DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +452
DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL
IC..1_1265 +1289017 DDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYL +1289314

Cj..6_1335 +453 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +552
DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE
IC..1_1265 +1289317 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +1289614

Cj..6_1335 +553 KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVE +652
KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE
IC..1_1265 +1289617 KIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVE +1289914

Cj..6_1335 +653 GERGTFFKKYSSFI +666
GERGTFFKKYSSFI
IC..1_1265 +1289917 GERGTFFKKYSSFI +1289956

CjjRM3196_1335 vs: ICDCCJ07001_1268 in ICDCCJ07001 (Campylobacter jejuni subsp. jejuni ICDCCJ07001, complete genome.)
Gene length: 864bp / 288aa PV: No
Function: hypothetical protein

Score: 1186.00 bits: 515.42 e-value: 0.000000
length: 513 gaps: 17 id: 295 positives: 368 coverage: 1.02 query coverage 0.44

Cj..6_1335 +163 FFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLK +262
F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSLTKQLPLLK
IC..1_1268 +1292278 FLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSLTKQLPLLK +1292575

Cj..6_1335 +263 KYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMG +362
KYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D
IC..1_1268 +1292578 KYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVKYFQPIDGI +1292875

Cj..6_1335 +363 FSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYN +462
SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L +G +K E + +TAYGG+G V + WNLFR +FE + + +++ +YN
IC..1_1268 +1292878 VSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENL---FTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN--IYN +1293175

Cj..6_1335 +463 CTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEK +562
CTEGGARIEGTIEKPFLWACENLL KDL+KPF KL L N + +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+K
IC..1_1268 +1293178 CTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLN-LEYNSK-*IMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLNFIIQK +1293475

Cj..6_1335 +563 IDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG +662
ID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ER++
IC..1_1268 +1293478 IDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLERIKN +1293775

Cj..6_1335 +663 ERG-TFFKKYSSF +675
F KK+ S+
IC..1_1268 +1293778 ANK*NF*KKFRSY +1293814

CjjRM3196_1335 vs: CJM1_1292 in M1 (Campylobacter jejuni subsp. jejuni M1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: Motility accessory factor

Score: 1645.00 bits: 713.41 e-value: 0.000000
length: 678 gaps: 27 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
CJM1_1292 +1256127 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1256424

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +200
FKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
CJM1_1292 +1256427 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1256724

Cj..6_1335 +201 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
CJM1_1292 +1256727 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1257024

Cj..6_1335 +301 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
CJM1_1292 +1257027 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1257324

Cj..6_1335 +401 PDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
+ I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF KL
CJM1_1292 +1257327 AKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKL +1257624

Cj..6_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +600
PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARI
CJM1_1292 +1257627 NPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARI +1257924

Cj..6_1335 +601 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +678
YVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
CJM1_1292 +1257927 YVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1258158

CjjRM3196_1335 vs: MTVDSCj20_1315 in MTVDSCj20 (Campylobacter jejuni subsp. jejuni strain MTVDSCj20, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: PseD protein

Score: 1645.00 bits: 713.41 e-value: 0.000000
length: 678 gaps: 27 id: 413 positives: 495 coverage: 0.63 query coverage 0.62

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F QKELFNKNIEAL NI LKESLKEIKSSKF+LILGKD LDINL++TS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
MT..0_1315 +1291224 MKFNLNQKELFNKNIEALDNIPLKESLKEIKSSKFKLILGKDILDINLQNTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1291521

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQT---SSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENF +200
FKALLQNKNHQHIVVFEKDIEIIW MFHILDFSNELQK L+++ T S D+ F S F QFSRIYFLELIS YYER+ E+IL LN +
MT..0_1315 +1291524 FKALLQNKNHQHIVVFEKDIEIIWTMFHILDFSNELQKNNLIIINTNILSEFDLLNFYKKANS-IFLQFSRIYFLELISNYYERYNEEILKLNDTILSTI +1291821

Cj..6_1335 +201 KYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVL +300
K SII +GND +D L GI++F+YNL ++THP + L KR LSDTAIIVSTGPSLTKQLPLLK+YA KATIFCADSAYPILAKH +KPDYV LER
MT..0_1315 +1291824 KISIIQYGNDSIDNLMGIKHFIYNLSKLLTHPHSEIFLKKRYKLSDTAIIVSTGPSLTKQLPLLKQYANKATIFCADSAYPILAKHNIKPDYVCMLERDD +1292121

Cj..6_1335 +301 ETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD-FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSH +400
S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH
MT..0_1315 +1292124 IVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLAKYFQPIDGMVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSH +1292421

Cj..6_1335 +401 PDEHIFGAL-DG--EKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKL +500
+ I L +G +K E + + AYGG+G V + W LFR IFE+ + +++ +YNCTEGGARI+GTIEKPFLWACENLL KDL+KPF KL
MT..0_1315 +1292424 AKDFIHEKLHEGHFQKDENL---FTSIAYGGKGEVESSYFWKLFREIFEKWISHDNNFIN--IYNCTEGGARIKGTIEKPFLWACENLLGKDLNKPFPKL +1292721

Cj..6_1335 +501 EPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +600
PL +NKQNE +LKAY K+ KSI HC+DF K L ++ I+ +YL+L E +E LN I+KID K +++D + MQDLYEILGPLL QFELNLARI
MT..0_1315 +1292724 NPLNINKQNELMLKAYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIEESKELLNFIIQKIDTIKYQIDDAKNMQDLYEILGPLLVQFELNLARI +1293021

Cj..6_1335 +601 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG-TFFKKYSSF +678
YVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++ R++ F KK+ S+
MT..0_1315 +1293024 YVLNPKTPEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYLRRIKNANK*NF*KKFRSY +1293255

CjjRM3196_1335 vs: ERS445056_01444 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1944bp / 648aa PV: No
Function: PseD protein

Score: 2244.00 bits: 971.80 e-value: 0.000000
length: 663 gaps: 15 id: 514 positives: 560 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
ER.._01444 +1370964 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1371261

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAE FKYS
ER.._01444 +1371264 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYS +1371561

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER T+
ER.._01444 +1371564 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTA +1371861

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD++V F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD++
ER.._01444 +1371864 EFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1372161

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLNK
ER.._01444 +1372164 QNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1372461

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTK
ER.._01444 +1372464 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1372761

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
ER.._01444 +1372764 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1372950

CjjRM3196_1335 vs: ERS445056_01446 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1953bp / 651aa PV: Yes
Function: motility accessory factor

Score: 2241.00 bits: 970.51 e-value: 0.000000
length: 667 gaps: 9 id: 516 positives: 560 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+L
ER.._01446 +1374773 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVL +1375070

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
ER.._01446 +1375073 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1375370

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH +KPDYVLSLER+ TS
ER.._01446 +1375373 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1375670

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
ER.._01446 +1375673 EFFNNDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1375970

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
ER.._01446 +1375973 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1376270

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
ER.._01446 +1376273 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1376570

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +667
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
ER.._01446 +1376573 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1376771

CjjRM3196_1335 vs: ERS445056_01430 in NCTC11351 (Campylobacter jejuni genome assembly NCTC11351, chromosome : 1.)
Gene length: 1947bp / 649aa PV: Yes
Function: motility accessory factor

Score: 2193.00 bits: 949.80 e-value: 0.000000
length: 652 gaps: 7 id: 501 positives: 547 coverage: 0.77 query coverage 0.75

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNG+L
ER.._01430 +1357049 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQAMLNTYNDKYLLYPVLYFYGFGNGVL +1357346

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
ER.._01430 +1357349 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1357646

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADS+YPILAKH +KPDYV LER T+
ER.._01430 +1357649 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSSYPILAKHDIKPDYVCMLERSEFTA +1357946

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD+D+ F+ HP +YL+ RN ++ Y+ L DF Y +GFSVAHM YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
ER.._01430 +1357949 EFFNHDFGEFDRDIVFICAGVVHPKAIEYLK--GRNLVITQKVLGLPYYINLKDFSYAAVGFSVAHMLAYLATYLNHKNIIFIGQDLAYAENGNSHPDDY +1358246

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYG + V T+ +W LF+N FE ++ + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
ER.._01430 +1358249 QNSA----NYESQMYEHILTKAYGEKEEVKTHAIWILFKNYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1358546

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKEDA
ER.._01430 +1358549 KQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDA +1358846

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
ER.._01430 +1358849 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1359002

CjjRM3196_1335 vs: A0W68_07165 in OD267 (Campylobacter jejuni strain OD267, complete genome.)
Gene length: 1229bp / 409aa PV: No
Function: hypothetical protein

Score: 475.00 bits: 208.72 e-value: 0.000000
length: 145 gaps: 8 id: 119 positives: 128 coverage: 0.82 query coverage 0.50

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
A0.._07165 +1337687 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1337984

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQ +145
FKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+L+
A0.._07165 +1337987 FKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILE +1338119

Score: 307.00 bits: 136.25 e-value: 0.000000
length: 69 gaps: 0 id: 62 positives: 64 coverage: 0.82 query coverage 0.50

Cj..6_1335 +166 FSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKEL +234
FSRIYFLEL+SHYYERFHEDILGLNKKLAENFK I+ GNDPLDALQGIEQFVYNLP MITHPSYKEL
A0.._07165 +1338103 FSRIYFLELMSHYYERFHEDILGLNKKLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKEL +1338307

Score: 683.00 bits: 298.44 e-value: 0.000000
length: 208 gaps: 4 id: 154 positives: 176 coverage: 0.82 query coverage 0.50

Cj..6_1335 +456 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIE +555
+YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLNKQNEFLLKAYYKVCKSI+HCRDFS ++ I+ ++SL +++ + I+
A0.._07165 +1338307 LYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSNKFIKSYDKIKNSFMSLQNSQKNEIFIQEIIQ +1338604

Cj..6_1335 +556 KIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +655
ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A0.._07165 +1338607 DIDKTKTQIDELCNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1338904

Cj..6_1335 +656 EGERGTFF +663
+FF
A0.._07165 +1338907 RR*EKSFF +1338928

CjjRM3196_1335 vs: H730_07620 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: motility accessory factor

Score: 2311.00 bits: 1000.70 e-value: 0.000000
length: 665 gaps: 19 id: 529 positives: 574 coverage: 0.82 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLK+I+SSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
H730_07620 +1368465 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKD----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1368762

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+L+TSSLDIE FSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
H730_07620 +1368765 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILETSSLDIELFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1369062

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER+ T+
H730_07620 +1369065 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERIPLTA +1369362

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP--- +400
EFFNNDF EFDKD+ FV+KS+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
H730_07620 +1369365 EFFNNDFGEFDKDILFVIKSWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +1369662

Cj..6_1335 +401 ---DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLE +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLE
H730_07620 +1369665 KNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQN---TISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLE +1369962

Cj..6_1335 +501 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPK +600
PLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLY+IL L QFELNLARIYVLNPK
H730_07620 +1369965 PLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPK +1370262

Cj..6_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +665
TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+KWMERV + FF
H730_07620 +1370265 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERVRR*KRNFF +1370457

CjjRM3196_1335 vs: H730_07630 in R14 (Campylobacter jejuni subsp. jejuni R14, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: motility accessory factor

Score: 2205.00 bits: 954.98 e-value: 0.000000
length: 652 gaps: 11 id: 504 positives: 553 coverage: 0.78 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLK+I+SSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
H730_07630 +1372274 MTFTPTQKELFNKNIEALSNILLKESLKQIQSSKFELILGKDNLDINLKD----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1372571

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+L+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
H730_07630 +1372574 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMILENDKLQAQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1372871

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGND D LQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER +
H730_07630 +1372874 IVSHGNDSADTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVA +1373171

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
H730_07630 +1373174 EFFNNDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1373471

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ V T+ +W LF+ FE ++ + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
H730_07630 +1373474 QNSA----NYESQMYEHILTKAYGGKEEVKTHAIWILFKKYFENEIIPNTIKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1373771

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKEDA
H730_07630 +1373774 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKEDA +1374071

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKL+KWMERV
H730_07630 +1374074 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERV +1374227

CjjRM3196_1335 vs: CJE1524 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: motility accessory factor

Score: 2223.00 bits: 962.74 e-value: 0.000000
length: 652 gaps: 17 id: 514 positives: 559 coverage: 0.80 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJE1524 +1416258 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1416555

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
CJE1524 +1416558 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1416855

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
CJE1524 +1416858 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1417155

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNII IGQDLAYA+NGNSHPD++
CJE1524 +1417158 EFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAYAENGNSHPDDY +1417455

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
CJE1524 +1417458 ----QNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1417755

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
CJE1524 +1417758 KQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1418055

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJE1524 +1418058 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1418211

CjjRM3196_1335 vs: CJE1522 in RM1221 (Campylobacter jejuni RM1221, complete genome.)
Gene length: 1962bp / 654aa PV: No
Function: motility accessory factor

Score: 2194.00 bits: 950.23 e-value: 0.000000
length: 663 gaps: 12 id: 504 positives: 554 coverage: 0.77 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJE1522 +1412440 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1412737

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
CJE1522 +1412740 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1413037

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
CJE1522 +1413040 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1413337

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H
CJE1522 +1413340 EFFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGF +1413637

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
I L E TTAYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNK
CJE1522 +1413640 IHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1413937

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTK
CJE1522 +1413940 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1414237

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
CJE1522 +1414240 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1414426

CjjRM3196_1335 vs: CjjRM1285_1333 in RM1285 (Campylobacter jejuni subsp. jejuni strain RM1285, complete genome.)
Gene length: 1968bp / 656aa PV: No
Function: motility accessory factor (function unknown)

Score: 1624.00 bits: 704.35 e-value: 0.000000
length: 661 gaps: 16 id: 390 positives: 478 coverage: 0.59 query coverage 0.58

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F Q +LFN+NI AL N +LKESLK+IKSSKFELILGKDNLDINLK+TS LY++ I EL +MLN YNDKYLLYPVLYFYGFGNGIL
Cj..5_1333 +1294836 MKFNQNQIKLFNRNINALNNTVLKESLKQIKSSKFELILGKDNLDINLKNTS--------DNTFLYKNAIDELNSMLNIYNDKYLLYPVLYFYGFGNGIL +1295133

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEK++EII IM H++DFS EL++ +L++L SL+ + + + CSS PFFQFSR YFLEL S YYE+ + IL LNK L E FK S
Cj..5_1333 +1295136 FKALLQNKNHQHIVVFEKELEIIKIMLHLMDFSQELKENKLIILDINSLEFQDYYDLCSSNPFFQFSRTYFLELSSDYYEKDKKYILKLNKDLIEKFKNS +1295433

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ +GND D LQGIEQ +YNLP MITH +Y++ L KR+NLSDTAIIVSTGPSLTKQLP+LKKYA KATI ADS+YPILAKH +KPDYV+SLER+L TS
Cj..5_1333 +1295436 ILLYGNDSKDNLQGIEQLIYNLPKMITHTAYQDFLKKRENLSDTAIIVSTGPSLTKQLPILKKYANKATIISADSSYPILAKHDIKPDYVVSLERILLTS +1295733

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP-DE +400
EFFNN+F +FDKD+ F+ THP+T K L+KNNRNFMLV + F YLKL FG G SVA +AY L++ L+HKNIIFIGQDLAY+ +G SH D
Cj..5_1333 +1295736 EFFNNNFGDFDKDILFITTHLTHPQTIKNLEKNNRNFMLVHRSSEFTTYLKLKKFGELCEGHSVANVAYGLAVFLRHKNIIFIGQDLAYSNDGFSHTKDY +1296033

Cj..6_1335 +401 HIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+G + + +T AYGG G V + W LFR E+ + + + YNCTEGGARIEG IEKPF CE LL +L+K F K++PLS
Cj..5_1333 +1296036 RNLNKHEGHYERDFGH-FRTIAYGGVGFVESSFYWSLFRFFLEKRIHEANQLELCNTYNCTEGGARIEGAIEKPFKKTCEALLKNNLNKNFPKIDPLSSH +1296333

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLN------EKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +600
KQNE LLK YYK+ KSI HC++F K L + IQ + LN E +E LN I++ID+ K KLED + M DL EIL LL QFELNLARI+VLNP
Cj..5_1333 +1296336 KQNELLLKCYYKIIKSINHCKNFKKELLKSYNHIQESFSNLNLISNLDEGKEILNYLIQEIDKIKFKLEDRKNMLDLCEILKTLLVQFELNLARIFVLNP +1296633

Cj..6_1335 +601 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGE +661
KT ED++ KS+LW+KEH+EF +++Y HI+AQE ALIKNI+PLE +L +R L K+ ++ +
Cj..5_1333 +1296636 KTSEDSYKKSLLWVKEHIEFFKMIYTHIEAQEKALIKNIIPLENELTQRNLEKYKRKINAK +1296816

CjjRM3196_1335 vs: AXW77_06575 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: PseD protein

Score: 2282.00 bits: 988.19 e-value: 0.000000
length: 652 gaps: 13 id: 525 positives: 566 coverage: 0.82 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKD N GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
AX.._06575 +1262441 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKD----NSGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1262738

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AX.._06575 +1262741 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1263038

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
AX.._06575 +1263041 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1263338

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ FV HP +YL+ NR +++ Y F Y+KL F + SVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD++
AX.._06575 +1263341 EFFNHDFGEFDKDILFVCAGVVHPKAIEYLKGRNRKYLITPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +1263638

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
AX.._06575 +1263641 ----QNSANYESQMYKHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1263938

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYL LN+KE DLNLAI KIDEFKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
AX.._06575 +1263941 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1264238

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AX.._06575 +1264241 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1264394

CjjRM3196_1335 vs: AXW77_06490 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2216.00 bits: 959.72 e-value: 0.000000
length: 653 gaps: 17 id: 515 positives: 557 coverage: 0.80 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNI+ALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
AX.._06490 +1245620 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1245917

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AX.._06490 +1245920 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1246217

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ TS
AX.._06490 +1246220 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1246517

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYA++G SH +
AX.._06490 +1246520 EFFNNDFGEFDKDILFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKD- +1246817

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
AX.._06490 +1246820 -YSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1247117

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQSIYL LN+KE DLNLAI KIDEFKNKLED++QMQDLYEIL LL QFELNLARIYVLNPKTKED
AX.._06490 +1247120 NKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSIYLNLNKKENDLNLAIRKIDEFKNKLEDIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKED +1247417

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AX.._06490 +1247420 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1247576

CjjRM3196_1335 vs: AXW77_06565 in RM3194 (Campylobacter jejuni strain RM3194, complete genome.)
Gene length: 1950bp / 650aa PV: No
Function: PseD protein

Score: 2227.00 bits: 964.47 e-value: 0.000000
length: 667 gaps: 20 id: 517 positives: 563 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNI+ALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
AX.._06565 +1258623 MTFTPTQKELFNKNIKALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1258920

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AX.._06565 +1258923 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1259220

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ TS
AX.._06565 +1259223 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1259520

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FVLKSY HPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYF+MGFSVA M + L++HLKHKNI+ IGQDLAYA++G SH +
AX.._06565 +1259523 EFFNNDFGEFDKDILFVLKSYVHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFNMGFSVANMNFLLAIHLKHKNIVLIGQDLAYAEDGLSHTKD- +1259820

Cj..6_1335 +401 IFGALDGE----KKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPL +500
+ LD +++ Y T AYG G V + VW LFR FEQDV +K YNCTEGGARIEG IEKPFLWACENLL KDL+KPFEKLEPL
AX.._06565 +1259823 -YSNLDKHEGHFQRDKNKY--TTQAYGDNGKVESSFVWTLFRHNFEQDVANAKKNYYITTYNCTEGGARIEGAIEKPFLWACENLLDKDLNKPFEKLEPL +1260120

Cj..6_1335 +501 SLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNL---AIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLN +600
SLNKQNEFLLKAYYKV +SIKHCRDFS ++ I+ ++SL +E+ L I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLN
AX.._06565 +1260123 SLNKQNEFLLKAYYKVYQSIKHCRDFSNKFIKSYDKIKNSFMSLQNSQENKTLIKEIIKDIDKIKTQIDELYNTQKDLMQILGPLLTQFELNLARIYVLN +1260420

Cj..6_1335 +601 PKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +667
PKTKEDAFNKSILWIKEHLEFMELVY HIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
AX.._06565 +1260423 PKTKEDAFNKSILWIKEHLEFMELVYEHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +1260621

CjjRM3196_1335 vs: CjjRM3196_1337 in RM3196 (Campylobacter jejuni subsp. jejuni strain RM3196, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 131.00 bits: 60.33 e-value: 0.000000
length: 59 gaps: 0 id: 48 positives: 51 coverage: 0.65 query coverage 0.65

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..6_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1292082

Score: 1656.00 bits: 718.16 e-value: 0.000000
length: 618 gaps: 11 id: 385 positives: 461 coverage: 0.65 query coverage 0.65

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS L+++ T L+ SN
Cj..6_1337 +1292077 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSN +1292374

Cj..6_1335 +157 FC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSL +256
+ F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSL
Cj..6_1337 +1292377 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +1292674

Cj..6_1335 +257 TKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD +356
TKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L
Cj..6_1337 +1292677 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +1292974

Cj..6_1335 +357 -FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLD +456
F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L + +TAYGG+G V + WNLFR +FE + + +++
Cj..6_1337 +1292977 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +1293274

Cj..6_1335 +457 TKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLN +556
+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN
Cj..6_1337 +1293277 --IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +1293574

Cj..6_1335 +557 LAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWM +656
I+KID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++
Cj..6_1337 +1293577 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +1293874

Cj..6_1335 +657 ERVEGERG-TFFKKYSSF +674
ER++ F KK+ S+
Cj..6_1337 +1293877 ERIKNANK*NF*KKFRSY +1293928

CjjRM3196_1335 vs: CjjRM3197_1337 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 1990bp / 663aa PV: Yes
Function: No annotation data

Score: 131.00 bits: 60.33 e-value: 0.000000
length: 59 gaps: 0 id: 48 positives: 51 coverage: 0.65 query coverage 0.65

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
M F Q +LFN+NI AL N +LKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..7_1337 +1291908 MKFNQNQIKLFNRNINALNNTILKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1292082

Score: 1656.00 bits: 718.16 e-value: 0.000000
length: 618 gaps: 11 id: 385 positives: 461 coverage: 0.65 query coverage 0.65

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKS L+++ T L+ SN
Cj..7_1337 +1292077 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSNLIIINTNILNDFDLSN +1292374

Cj..6_1335 +157 FC--SSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSL +256
+ F QFSRIYFLELIS YYER+ ++IL LN + K SII +GNDP+D L G+++F+YNLP + THP + L KR LSDTAIIVSTGPSL
Cj..7_1337 +1292377 LYKKTNNIFLQFSRIYFLELISNYYERYNKEILELNNTILSIIKISIIRYGNDPVDNLMGVKHFIYNLPKLFTHPYSEVFLRKRNKLSDTAIIVSTGPSL +1292674

Cj..6_1335 +257 TKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDD +356
TKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER S+ F+NDFKEFDK + F+L S H ++L++NNR +MLV F YL L
Cj..7_1337 +1292677 TKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERDDIVSKCFDNDFKEFDKGILFILASVVHKEVIEFLERNNREYMLVPRAYDFFYYLNLVK +1292974

Cj..6_1335 +357 -FGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLD +456
F D SVAHM Y+L+ L HKNIIFIGQDLAY+K+ SH + I L + +TAYGG+G V + WNLFR +FE + + +++
Cj..7_1337 +1292977 YFQPIDGIVSVAHMNYWLAKFLSHKNIIFIGQDLAYSKDQSSHAKDFIHEKLHEGHFQKDENLFTSTAYGGKGKVESSYFWNLFRELFETWISYDKNFIN +1293274

Cj..6_1335 +457 TKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSL-----NEKEEDLN +556
+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPF KL PL +NKQNE +LK Y K+ KSI HC+DF K L ++ I+ +YL+L E +E LN
Cj..7_1337 +1293277 --IYNCTEGGARIEGTIEKPFLWACENLLSKDLNKPFPKLNPLNINKQNELMLKTYNKIYKSIYHCKDFNKKLLQEYNEIKELYLTLENLQIGESKELLN +1293574

Cj..6_1335 +557 LAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWM +656
I+KID K +++D + MQDLYEILGPLL QFELNLARIYVLNPKT ED+FNKS++WIKEHLE +E++YGHI+AQE AL +NI+PLE+KLKERK+ K++
Cj..7_1337 +1293577 FIIQKIDIVKYQIDDAKNMQDLYEILGPLLIQFELNLARIYVLNPKTLEDSFNKSLIWIKEHLEWIEMIYGHIQAQENALFENIIPLEQKLKERKMQKYL +1293874

Cj..6_1335 +657 ERVEGERG-TFFKKYSSF +674
ER++ F KK+ S+
Cj..7_1337 +1293877 ERIKNANK*NF*KKFRSY +1293928

CjjRM3196_1335 vs: CjjRM3197_1335 in RM3197 (Campylobacter jejuni subsp. jejuni strain RM3197, complete genome.)
Gene length: 2002bp / 667aa PV: Yes
Function: No annotation data

Score: 182.00 bits: 82.32 e-value: 0.000000
length: 59 gaps: 0 id: 59 positives: 59 coverage: 1.00 query coverage 1.00

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
Cj..7_1335 +1288081 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +1288255

Score: 2882.00 bits: 1247.01 e-value: 0.000000
length: 610 gaps: 0 id: 610 positives: 610 coverage: 1.00 query coverage 1.00

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN
Cj..7_1335 +1288250 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +1288547

Cj..6_1335 +157 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +256
FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK
Cj..7_1335 +1288550 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +1288847

Cj..6_1335 +257 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +356
QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG
Cj..7_1335 +1288850 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSEFFNNDFKEFDKDVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +1289147

Cj..6_1335 +357 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKV +456
YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKV
Cj..7_1335 +1289150 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKV +1289447

Cj..6_1335 +457 YNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDE +556
YNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDE
Cj..7_1335 +1289450 YNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDE +1289747

Cj..6_1335 +557 FKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERG +656
FKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVEGERG
Cj..7_1335 +1289750 FKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPLEEKLKERKLNKWMERVEGERG +1290047

Cj..6_1335 +657 TFFKKYSSFI +666
TFFKKYSSFI
Cj..7_1335 +1290050 TFFKKYSSFI +1290077

CjjRM3196_1335 vs: CJS3_1430 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1916bp / 638aa PV: No
Function: No annotation data

Score: 1107.00 bits: 481.34 e-value: 0.000000
length: 290 gaps: 8 id: 247 positives: 260 coverage: 0.80 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJS3_1430 +1321539 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1321836

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
CJS3_1430 +1321839 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1322136

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYV +290
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV
CJS3_1430 +1322139 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1322406

Score: 1073.00 bits: 466.67 e-value: 0.000000
length: 363 gaps: 9 id: 261 positives: 293 coverage: 0.80 query coverage 0.76

Cj..6_1335 +290 VLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAY +389
L LER T+EFFNNDF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHM+Y+LS+ L HKNII IGQDLAY
CJS3_1430 +1322381 CLYLERTEITAEFFNNDFGEFDKDIVFVCSGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMSYFLSVLLNHKNIILIGQDLAY +1322678

Cj..6_1335 +390 AKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDK +489
A+NGNSHPD++ A E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+K
CJS3_1430 +1322681 AENGNSHPDDYQNSA----NYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNK +1322978

Cj..6_1335 +490 PFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARI +589
PFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQSIYLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PL TQFELNLARI
CJS3_1430 +1322981 PFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARI +1323278

Cj..6_1335 +590 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
CJS3_1430 +1323281 YVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1323467

CjjRM3196_1335 vs: CJS3_1427 in S3 (Campylobacter jejuni subsp. jejuni S3, complete genome.)
Gene length: 1949bp / 649aa PV: No
Function: No annotation data

Score: 1151.00 bits: 500.32 e-value: 0.000000
length: 290 gaps: 8 id: 255 positives: 267 coverage: 0.75 query coverage 0.73

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I E +MLNTYNDKYLLYPVLYFYGFGNGIL
CJS3_1427 +1317722 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDEFNSMLNTYNDKYLLYPVLYFYGFGNGIL +1318019

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
+KALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
CJS3_1427 +1318022 YKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1318319

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYV +290
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV
CJS3_1427 +1318322 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYV +1318589

Score: 1045.00 bits: 454.59 e-value: 0.000000
length: 350 gaps: 4 id: 233 positives: 270 coverage: 0.75 query coverage 0.73

Cj..6_1335 +314 VWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETI +413
+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H I L E
CJS3_1427 +1318636 IVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERD +1318933

Cj..6_1335 +414 SYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVC +513
TTAYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV
CJS3_1427 +1318936 LDRFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +1319233

Cj..6_1335 +514 KSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +613
+SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE
CJS3_1427 +1319236 QSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +1319533

Cj..6_1335 +614 HLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
HLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
CJS3_1427 +1319536 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1319683

CjjRM3196_1335 vs: A0W69_07845 in WP2202 (Campylobacter jejuni strain WP2202, complete genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 2243.00 bits: 971.37 e-value: 0.000000
length: 661 gaps: 43 id: 488 positives: 538 coverage: 0.82 query coverage 0.73

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDIN--------LKDTSI-KNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLY +100
MTF PTQKELFN + NL++ + + K GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLY
A0.._07845 +1463497 MTFTPTQKELFNNQV---------------------------NLNLS*VKII*ISI*KIQV*KIMGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLY +1463794

Cj..6_1335 +101 FYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNK +200
FYGFGNGILFKALLQNKNHQHI+VFEKDIEIIW+MFH+LDFSNELQ SRLM+LQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNK
A0.._07845 +1463797 FYGFGNGILFKALLQNKNHQHIIVFEKDIEIIWVMFHVLDFSNELQNSRLMILQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNK +1464094

Cj..6_1335 +201 KLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVL +300
KLAENFK I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV
A0.._07845 +1464097 KLAENFKNIILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVC +1464394

Cj..6_1335 +301 SLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAK +400
LER T+EFFN DF EFDKD+ F+ HP +YL+ +RN ++ +F Y+ L DF Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+
A0.._07845 +1464397 MLERTEITAEFFNHDFGEFDKDIIFICAGVVHPKAIEYLK--DRNLVITQKVLAFPYYINLKDFSYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAE +1464694

Cj..6_1335 +401 NGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPF +500
NGNSHPD++ + E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPF
A0.._07845 +1464697 NGNSHPDDY----QNSANYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLHKDLNKPF +1464994

Cj..6_1335 +501 EKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYV +600
EKLEPLSLNKQNEFLLKAYYKVCKSI+HCRDFSKILS+DFENIQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYV
A0.._07845 +1464997 EKLEPLSLNKQNEFLLKAYYKVCKSIEHCRDFSKILSNDFENIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYV +1465294

Cj..6_1335 +601 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +661
LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A0.._07845 +1465297 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1465477

CjjRM3196_1335 vs: QZ67_01453 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1512bp / 504aa PV: Yes
Function: hypothetical protein

Score: 1991.00 bits: 862.66 e-value: 0.000000
length: 662 gaps: 20 id: 481 positives: 531 coverage: 0.95 query coverage 0.72

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
QZ67_01453 +1322595 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1322892

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
QZ67_01453 +1322895 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1323192

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ TS
QZ67_01453 +1323195 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1323492

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
QZ67_01453 +1323495 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1323792

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
QZ67_01453 +1323795 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1324092

Cj..6_1335 +501 NKQNEFLL-KAYYKVCKSI-KHCRDF---SK--ILSDDFENIQSIYLSLNEKEEDLNL-AIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYV +600
NKQNEFLL AYYKV +S +F SK IL I +Y+ + K++ + + ++K K KLED++QMQDLY+IL L QFELNLARIYV
QZ67_01453 +1324095 NKQNEFLL*MAYYKVYQSY*AIVENF**NSK*MILK-----IYKVYI*V*MKKKRISI*LLKK*MSLKTKLEDIKQMQDLYDILQSLFIQFELNLARIYV +1324392

Cj..6_1335 +601 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVE +662
LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
QZ67_01453 +1324395 LNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVR +1324578

CjjRM3196_1335 vs: QZ67_01469 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 2152.00 bits: 932.12 e-value: 0.000000
length: 663 gaps: 15 id: 497 positives: 547 coverage: 0.77 query coverage 0.75

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNG+L
QZ67_01469 +1336523 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGVL +1336820

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
QZ67_01469 +1336823 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1337120

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKHG+KPDYV LER T+
QZ67_01469 +1337123 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHGIKPDYVCMLERTEITA +1337420

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF+EFDKD+ F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD++
QZ67_01469 +1337423 EFFNHDFREFDKDICFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +1337720

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLNK
QZ67_01469 +1337723 QNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLAKDLNKPFEKLEPLSLNK +1338020

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SIKHCRDF ++ I+ ++SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTK
QZ67_01469 +1338023 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFMSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1338320

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
QZ67_01469 +1338323 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1338509

CjjRM3196_1335 vs: QZ67_01471 in YH001 (Campylobacter jejuni subsp. jejuni strain YH001, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: hypothetical protein

Score: 2249.00 bits: 973.96 e-value: 0.000000
length: 667 gaps: 9 id: 517 positives: 560 coverage: 0.79 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNG+L
QZ67_01471 +1340332 MTFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGVL +1340629

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLM+L+ L + + CS KPFFQFSRIYFLEL+SHYYERFHED+L LNKKL + FK S
QZ67_01471 +1340632 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMILENDKLQTQDYNELCSFKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLVQYFKDS +1340929

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
IISHGND D LQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA ATIFCADSAYPILAKH +KPDYVLSLER+ TS
QZ67_01471 +1340932 IISHGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANTATIFCADSAYPILAKHDIKPDYVLSLERIPLTS +1341229

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD+DV FV S+ +P+T KYLQKNNRNFML+S + FI + +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
QZ67_01471 +1341232 EFFNHDFGEFDRDVLFVCVSWVYPQTIKYLQKNNRNFMLISRPSDFIKNINFHQYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1341529

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
QZ67_01471 +1341532 -YSNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1341829

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKV +SIKHCRDF KILS+DFENIQSIYLSLNEKEED+NLAIEKIDEFKNKLED++QMQDLY+IL L QFELNLARIYVLNPKTKED
QZ67_01471 +1341832 NKQNEFLLKAYYKVYQSIKHCRDFNKILSNDFENIQSIYLSLNEKEEDINLAIEKIDEFKNKLEDIKQMQDLYDILQSLFIQFELNLARIYVLNPKTKED +1342129

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEG--ERGTFFKKYS +667
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +R KK S
QZ67_01471 +1342132 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKRKLILKKIS +1342330

CjjRM3196_1335 vs: N149_1281 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: Motility accessory factor

Score: 2292.00 bits: 992.51 e-value: 0.000000
length: 652 gaps: 7 id: 521 positives: 564 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFIPTQKE FNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQ MLNTYNDKYLLYPVLYFYGFGNGIL
N149_1281 +1278070 MTFIPTQKEFFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQIMLNTYNDKYLLYPVLYFYGFGNGIL +1278367

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
N149_1281 +1278370 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQNSRLMVLSTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1278667

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDP DALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N149_1281 +1278670 IVSHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1278967

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
N149_1281 +1278970 EFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1279267

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
N149_1281 +1279270 QNSA----NYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1279567

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKVC+SI+HCRDFSKILS+DFE IQS+YLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
N149_1281 +1279570 KQNEFLLKAYYKVCQSIEHCRDFSKILSNDFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1279867

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N149_1281 +1279870 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1280023

CjjRM3196_1335 vs: N149_1298 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: Motility accessory factor

Score: 2221.00 bits: 961.88 e-value: 0.000000
length: 653 gaps: 17 id: 512 positives: 556 coverage: 0.80 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F PTQKELFNKNIEALSNILLKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
N149_1298 +1294864 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +1295161

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
N149_1298 +1295164 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1295461

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYVLSLER+ TS
N149_1298 +1295464 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1295761

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYA++G SH +
N149_1298 +1295764 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKILAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKD- +1296061

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL+KDL+KPFEKLEPLSL
N149_1298 +1296064 -YSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSL +1296361

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQS+YL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL LL QFELNLARIYVLNPKTKED
N149_1298 +1296364 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSTLLIQFELNLARIYVLNPKTKED +1296661

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
N149_1298 +1296664 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1296820

CjjRM3196_1335 vs: N149_1296 in 15-537360 (Campylobacter coli 15-537360, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: Motility accessory factor

Score: 2233.00 bits: 967.06 e-value: 0.000000
length: 663 gaps: 15 id: 511 positives: 559 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDK+LLYPVLYFYGFGNGIL
N149_1296 +1291055 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKHLLYPVLYFYGFGNGIL +1291352

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
N149_1296 +1291355 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1291652

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
N149_1296 +1291655 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1291952

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
N149_1296 +1291955 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1292252

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A + + + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNK
N149_1296 +1292255 QNSA---NYESQMYKHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +1292552

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKVCKSIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTK
N149_1296 +1292555 QNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTK +1292852

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
N149_1296 +1292855 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1293041

CjjRM3196_1335 vs: AB430_08255 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1923bp / 641aa PV: No
Function: PseD protein

Score: 2208.00 bits: 956.27 e-value: 0.000000
length: 657 gaps: 25 id: 513 positives: 559 coverage: 0.80 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIE+LSNILLKESLKEI+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AB.._08255 +1558359 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1558656

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AB.._08255 +1558659 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1558956

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITH SYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ TS
AB.._08255 +1558959 IVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +1559256

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP--- +400
EFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYAK+G SH
AB.._08255 +1559259 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAKDGFSHTKDY +1559556

Cj..6_1335 +401 ---DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLE +500
D+H G +K + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLE
AB.._08255 +1559559 KNLDKHE-GHFQRDKGK-----FQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLE +1559856

Cj..6_1335 +501 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPK +600
PLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YLSLNEKEED+NLAI+KIDEFKNKLE+++QMQDLYEIL PLL QFELNLA+IYVLNPK
AB.._08255 +1559859 PLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLSLNEKEEDINLAIKKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPK +1560156

Cj..6_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +657
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AB.._08255 +1560159 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1560327

CjjRM3196_1335 vs: AB430_08325 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2227.00 bits: 964.47 e-value: 0.000000
length: 664 gaps: 17 id: 510 positives: 560 coverage: 0.79 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIE+LSNILLKESLKEI+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AB.._08325 +1571356 MTFTPTQKELFNKNIESLSNILLKESLKEIQSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1571653

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AB.._08325 +1571656 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +1571953

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITH SYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
AB.._08325 +1571956 IVSYGNDPLDALQGIEQFVYNLPQMITHSSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1572253

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
AB.._08325 +1572256 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1572553

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
AB.._08325 +1572556 QNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1572853

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
AB.._08325 +1572856 KQNEFLLKAYYKVCKSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1573153

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
AB.._08325 +1573156 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +1573345

CjjRM3196_1335 vs: AB430_08340 in BFR-CA-9557 (Campylobacter coli strain BFR-CA-9557 genome.)
Gene length: 1782bp / 594aa PV: Yes
Function: PseD protein

Score: 2116.00 bits: 916.59 e-value: 0.000000
length: 596 gaps: 7 id: 461 positives: 510 coverage: 0.78 query coverage 0.69

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+ L + ++
AB.._08340 +1575334 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +1575631

Cj..6_1335 +157 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +256
CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK SI+S+GNDPLDALQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSL K
AB.._08340 +1575634 LCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLIK +1575931

Cj..6_1335 +257 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +356
QLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F
AB.._08340 +1575934 QLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFC +1576231

Cj..6_1335 +357 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +456
Y +GFSVAH YL+ HL HKNIIFIGQDLAYA+NGNSHPD++ + E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + +
AB.._08340 +1576234 YAAVGFSVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDY----QNSANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGIT +1576531

Cj..6_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +556
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFENIQS+YLSLNEKEED+NLAI+KID
AB.._08340 +1576534 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFENIQSVYLSLNEKEEDINLAIKKID +1576831

Cj..6_1335 +557 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
EFKNKLE+++QMQDLYEIL PLL QFELNLA+IYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AB.._08340 +1576834 EFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1577119

CjjRM3196_1335 vs: VC76_06695 in FB1 (Campylobacter coli strain FB1, complete genome.)
Gene length: 1965bp / 655aa PV: No
Function: hypothetical protein

Score: 1609.00 bits: 697.88 e-value: 0.000000
length: 664 gaps: 20 id: 387 positives: 482 coverage: 0.59 query coverage 0.58

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F Q+E+F +NI AL N +L++ L++IK +KFEL+LG DNLDINL++T K+N LLY + I EL +ML YNDKYLLYPVLYFYGFGNGIL
VC76_06695 +1299942 MNFTSNQQEIFKQNINALVNEILRKKLQKIKNTKFELLLGNDNLDINLRNT--KDN------TLLYINTIDELNSMLEIYNDKYLLYPVLYFYGFGNGIL +1300239

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNK HQHIV+FE DIEI+WIMFH+LDFS E++K ++++ T ++I+ + +KPF F RIYFLEL S YYE+ +DI +NK L E FK +
VC76_06695 +1300242 FKALLQNKHHQHIVIFENDIEILWIMFHLLDFSCEIKKNKIIIFDTNEINIKDYEMLTLTKPFISFLRIYFLELSSSYYEKMNKDIQKVNKNLMEYFKKA +1300539

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
+I +GNDPLDALQGIEQFV+NLP M+TH SYKEL+ KRKNLS TAIIVSTGPSL KQLPLLKKY KATIFCADSAYPILAKH +KPDYV LER T+
VC76_06695 +1300542 MIGYGNDPLDALQGIEQFVHNLPKMLTHSSYKELIKKRKNLSKTAIIVSTGPSLIKQLPLLKKYQNKATIFCADSAYPILAKHNIKPDYVCMLERASLTA +1300839

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DFK+FDKD+ F+ S HP YL+KNNR ++L+S + SF ++ D+GYFD SVAHM+Y ++ L HKNIIFIGQDLAYA+NG+SHP E+
VC76_06695 +1300842 EFFNHDFKDFDKDIVFICASLIHPNAITYLEKNNREYILISRFLSFALFIACHDYGYFDQSPSVAHMSYIIAAKLCHKNIIFIGQDLAYAENGDSHPQEY +1301139

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
+ I ++ YGG+ V T+ +W LF+ I EQ I Y YNCTEGGA IEGTIE+ F C+ LL DL+KPF KL+ + K
VC76_06695 +1301142 ---QNSSTFESNIYQKIECLGYGGKNSVKTHSIWLLFKQIIEQ---LILDYPYINTYNCTEGGAWIEGTIEQSFKTTCDKLLLDDLNKPFIKLKKPNIQK +1301439

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSI-----YLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKT +600
QNE +LK+Y K+ KSIKHC +F K E+I+S YLSL E +E L++ I+ ID FK KLE++ M D YEILGPLL QFELNLARIYVLNPKT
VC76_06695 +1301442 QNELMLKSYAKIYKSIKHCIEFKKQTLATIEDIESSYTTLNYLSLEESKEILDILIQIIDNFKTKLENV-NMVDFYEILGPLLMQFELNLARIYVLNPKT +1301739

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
ED+FNKS+LWIKEHLEF+ +VYGHI+AQE AL KNI+PLEE+LK+R K+++R++ +F
VC76_06695 +1301742 LEDSFNKSVLWIKEHLEFIHMVYGHIEAQENALFKNIIPLEEELKKRGFKKYLQRIKNANK*YF +1301931

CjjRM3196_1335 vs: AR446_01555 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1908bp / 636aa PV: No
Function: PseE protein

Score: 1086.00 bits: 472.28 e-value: 0.000000
length: 711 gaps: 87 id: 324 positives: 411 coverage: 0.51 query coverage 0.49

Cj..6_1335 +11 FNKNIEALS----NillkeslkeiksskfelILGKDNLDINL-KDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +110
FNKN++ALS N L K+ + +F GKDNLDIN+ K + +K +YQDPIKEL+ L + D + YPVL+FYGFGNGIL+K LL
AR.._01555 +309557 FNKNLKALSGFEYNNLRKKLKDLKELREFTFTQGKDNLDINIIKKSNLKK---------MYQDPIKELEKDLEYFKD-FTRYPVLFFYGFGNGILYKILL +309854

Cj..6_1335 +111 QNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQ-----FSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +210
QN+ + I++FEK++E+I + +DFS +L RL++L+ + N F+ F R Y L + +YE + EDIL LNK + K
AR.._01555 +309257 QNQVLKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDI------NLPKMDKVFRLIGDLFYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNH +309554

Cj..6_1335 +211 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +310
+ HGNDP DALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER +
AR.._01555 +308957 NLMHGNDPKDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERDEIVA +309254

Cj..6_1335 +311 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +410
E FNNDF EFDKD+ F++ S H T YL+KN R ++L+ F YL+LD++GY + G SV+HMAY L+ L HKNII IGQDLAYAK+G +H
AR.._01555 +308657 ECFNNDFGEFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARYLELDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGF +308954

Cj..6_1335 +411 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +510
I L E TTAYGG G V + E+W LFR IFE + + +K YNCT+GGARIE IEKPF CE+LL DK F+KL+ L +
AR.._01555 +308357 IHANLHNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIA----FSKSKTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKE +308654

Cj..6_1335 +511 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAI--EKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +610
Q + LK Y K+ K + +F K + + +Q L + L L + ID+ K KL + + + L EILGP L + + L +Y+ + K D
AR.._01555 +308057 QVKLGLKIYQKIKKNMNLSLNFKK----ECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYL-FLQEILGPTLHHEQSILTPLYLKDIKDDSD +308354

Cj..6_1335 +611 AFNKSILWIKEH-------LEFMELVYGHIK-------------------------------------------AQESALIKNILPleeklkerklNKWM +710
NK WI H +E +E +K AQE ALIKNILPLEEKLKERKL+KWM
AR.._01555 +307757 KQNKLFAWIYAHESLMENIIELLEAQDKRLKIAILPLQDFLEKKKAL*KLRCIKASKKLLKKF*NILLNRISLCAQENALIKNILPLEEKLKERKLDKWM +308054

Cj..6_1335 +711 ERVEGERGTFF +721
ERV +FF
AR.._01555 +307457 ERVRK*EKSFF +307487

CjjRM3196_1335 vs: AR446_01560 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1832bp / 610aa PV: No
Function: No annotation data

Score: 1811.00 bits: 785.02 e-value: 0.000000
length: 619 gaps: 58 id: 420 positives: 466 coverage: 0.69 query coverage 0.63

Cj..6_1335 +38 ILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +137
+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILD
AR.._01560 +311272 VLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILD------ +311569

Cj..6_1335 +138 KSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAK +237
FSN + DILGLNKKLAENFK SI+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+K
AR.._01560 +310972 ----------------FSN------------------------ELQSDILGLNKKLAENFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +311269

Cj..6_1335 +238 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNF +337
RK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYV LER +E FNNDF EFDKD+ F++KS THPHT KYLQKNNR F
AR.._01560 +310672 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLERDEIVAECFNNDFGEFDKDIVFIVKSVTHPHTIKYLQKNNRAF +310969

Cj..6_1335 +338 MLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLF +437
+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H I L E TTAYGG G V + E+W LF
AR.._01560 +310372 ILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERDLDKFSTTAYGGNGKVQSSEIWTLF +310669

Cj..6_1335 +438 RNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIY +537
R FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDF ++ I+ +
AR.._01560 +310072 RHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSF +310369

Cj..6_1335 +538 LSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNIL +637
SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNIL
AR.._01560 +309772 TSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNIL +310069

Cj..6_1335 +638 PleeklkerklNKWMERVE +656
PLEEKLKERKL+KWMERV
AR.._01560 +309472 PLEEKLKERKLDKWMERVR +309526

CjjRM3196_1335 vs: AR446_01545 in HC2-48 (Campylobacter coli strain HC2-48, complete genome.)
Gene length: 1228bp / 409aa PV: No
Function: No annotation data

Score: 860.00 bits: 374.79 e-value: 0.000000
length: 295 gaps: 54 id: 213 positives: 223 coverage: 0.85 query coverage 0.52

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F PTQKELFNKNIEALSNILLKESLKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
AR.._01545 +305646 MIFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +305943

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILD FSN + DILGLNKKLAENFK S
AR.._01545 +305346 FKALLQNKNHQHIVVFEKDIEIIWIMFHILD----------------------FSN------------------------ELQSDILGLNKKLAENFKNS +305643

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLER +295
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYV LER
AR.._01545 +305046 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVCMLER +305328

Score: 321.00 bits: 142.28 e-value: 0.000000
length: 70 gaps: 0 id: 63 positives: 65 coverage: 0.85 query coverage 0.52

Cj..6_1335 +456 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKI +525
YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDF I
AR.._01545 +304848 TYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFNSI +305055

Score: 297.00 bits: 131.93 e-value: 0.000000
length: 75 gaps: 0 id: 72 positives: 74 coverage: 0.85 query coverage 0.52

Cj..6_1335 +577 LLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +651
+LTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AR.._01545 +304652 ILTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +304874

CjjRM3196_1335 vs: ATE51_00894 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1945bp / 648aa PV: Yes
Function: hypothetical protein

Score: 177.00 bits: 80.17 e-value: 0.000000
length: 59 gaps: 0 id: 58 positives: 58 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGG +59
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG
AT.._00894 +455222 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGG +455396

Score: 2123.00 bits: 919.61 e-value: 0.000000
length: 596 gaps: 7 id: 462 positives: 508 coverage: 0.80 query coverage 0.78

Cj..6_1335 +57 GGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSN +156
GGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL+ L + ++
AT.._00894 +455053 GGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLENDKLQAQDYTE +455350

Cj..6_1335 +157 FCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTK +256
CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAE FK SI+S+GNDPLDALQGIEQFVYNLP MITHPSY +LL+KRKNLSDTAIIVSTGPSLTK
AT.._00894 +454753 LCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNSIVSYGNDPLDALQGIEQFVYNLPQMITHPSYTKLLSKRKNLSDTAIIVSTGPSLTK +455050

Cj..6_1335 +257 QLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFG +356
QLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+EFFN DF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F
AT.._00894 +454453 QLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITAEFFNHDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFC +454750

Cj..6_1335 +357 YFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTK +456
Y +GFSVAH YL+ HL HKNIIFIGQDLAYA+NGNSHPD++ + E+ Y+ + T AYGG G V T+ +W LF+N FE ++ + +
AT.._00894 +454153 YAAVGFSVAHTLSYLATHLSHKNIIFIGQDLAYAENGNSHPDDY----QNSANYESQMYEHILTIAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGIT +454450

Cj..6_1335 +457 VYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKID +556
YNCTEGGARIEGTIEKPFLWACENLL+KDL+KPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KID
AT.._00894 +453853 TYNCTEGGARIEGTIEKPFLWACENLLYKDLNKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKID +454150

Cj..6_1335 +557 EFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
EFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AT.._00894 +453553 EFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +453838

CjjRM3196_1335 vs: ATE51_00898 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1944bp / 648aa PV: No
Function: hypothetical protein

Score: 2233.00 bits: 967.06 e-value: 0.000000
length: 664 gaps: 17 id: 513 positives: 561 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AT.._00898 +459031 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +459328

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AT.._00898 +458731 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +459028

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ HGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
AT.._00898 +458431 IVFHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +458728

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
AT.._00898 +458131 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +458428

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARI+GTIEKPFLWACENLL KDL+KPFEKLEPLSLN
AT.._00898 +457831 QNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +458128

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
AT.._00898 +457531 KQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +457828

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
AT.._00898 +457231 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +457420

CjjRM3196_1335 vs: ATE51_00928 in OR12 (Campylobacter coli strain OR12, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: hypothetical protein

Score: 2216.00 bits: 959.72 e-value: 0.000000
length: 653 gaps: 17 id: 510 positives: 557 coverage: 0.80 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F PTQKELFNKNIE+LSNILLKESLK+I+SSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
AT.._00928 +472027 MIFTPTQKELFNKNIESLSNILLKESLKQIQSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +472324

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
AT.._00928 +471727 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +472024

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDYVLSLER+ TS
AT.._00928 +471427 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYVLSLERIPLTS +471724

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FV HP T +YL+ N+ F++ +F Y+ L +F Y +GFSVAHMAY + HL HKNIIFIGQDLAYA++G SH +
AT.._00928 +471127 EFFNNDFGEFDKDIVFVCAGVVHPKTIEYLK--NKTFIITQKVLAFPYYINLKNFCYAAVGFSVAHMAYEFATHLSHKNIIFIGQDLAYAEDGFSHTKD- +471424

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG+G + EVW +FR F QD I + + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
AT.._00928 +470827 -YSNLDKHEGHFQRDKGKFQCLAYGGDGKAESSEVWTMFR-FFLQDT--ISRNIISTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +471124

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSIKHCRDFSKILS+DFE IQS+YL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PLL QFELNLA+IYVLNPKTKED
AT.._00928 +470527 NKQNEFLLKAYYKVCKSIKHCRDFSKILSNDFEKIQSVYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILSPLLIQFELNLAKIYVLNPKTKED +470824

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
AT.._00928 +470227 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +470383

CjjRM3196_1335 vs: YSQ_02185 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2250.00 bits: 974.39 e-value: 0.000000
length: 663 gaps: 15 id: 517 positives: 560 coverage: 0.79 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
YSQ_02185 +448770 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +449067

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAE FKYS
YSQ_02185 +448470 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAETFKYS +448767

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYA KATIFCADSAYPILAKH +KPDYV LER T+
YSQ_02185 +448170 ILSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSAYPILAKHDIKPDYVCMLERSEFTA +448467

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD++V F++KS HP YL K NF LVSTYASFINYLKLD FGYF+MGFSVAHMA YLSLHLKHKNIIFIGQDLAYAKNGNSHPD++
YSQ_02185 +447870 EFFNHDFGEFDREVCFIIKSVVHPNAINYLTKKTDNFTLVSTYASFINYLKLDHFGYFNMGFSVAHMACYLSLHLKHKNIIFIGQDLAYAKNGNSHPDDY +448167

Cj..6_1335 +401 IFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNK +500
A K + T AYGG+G V T+ VW +F+ EQD+EKIQKYLDTKVYNCTEGGARI+G IEKPFLWACENLL KDL+KPFEKLEPLSLNK
YSQ_02185 +447570 QNSATYESKAHE---PILTKAYGGKGEVKTHHVWLMFKQNLEQDIEKIQKYLDTKVYNCTEGGARIKGAIEKPFLWACENLLDKDLNKPFEKLEPLSLNK +447867

Cj..6_1335 +501 QNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTK +600
QNEFLLKAYYKV +SIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLA+IYVLNPKTK
YSQ_02185 +447270 QNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLAKIYVLNPKTK +447567

Cj..6_1335 +601 EDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
EDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
YSQ_02185 +446970 EDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +447156

CjjRM3196_1335 vs: YSQ_02175 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1935bp / 645aa PV: Yes
Function: PseD protein

Score: 2273.00 bits: 984.31 e-value: 0.000000
length: 652 gaps: 11 id: 520 positives: 564 coverage: 0.81 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSQ_02175 +444961 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +445258

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
YSQ_02175 +444661 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +444958

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GND D LQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
YSQ_02175 +444361 IVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +444658

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y + FSVAHM+Y+LS+ L HKNIIFIGQDLAYA+NGNSHPD++
YSQ_02175 +444061 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVEFSVAHMSYFLSVLLNHKNIIFIGQDLAYAENGNSHPDDY +444358

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
YSQ_02175 +443761 QNSA----NYESQMYKHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +444058

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKVCKSIKHCRDFSKILS++FE IQS+YLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PLL QFELNLARIYVLNPKTKEDA
YSQ_02175 +443461 KQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPKTKEDA +443758

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSQ_02175 +443161 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +443314

CjjRM3196_1335 vs: YSQ_02255 in RM1875 (Campylobacter coli RM1875, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2309.00 bits: 999.84 e-value: 0.000000
length: 657 gaps: 15 id: 529 positives: 568 coverage: 0.81 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSQ_02255 +462692 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +462989

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
YSQ_02255 +462392 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +462689

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GND D LQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ TS
YSQ_02255 +462092 IVSYGNDSTDTLQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +462389

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHP--- +400
EFFNNDF EFD+DV FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH
YSQ_02255 +461792 EFFNNDFGEFDQDVLFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKDY +462089

Cj..6_1335 +401 ---DEHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLE +500
D+H G +K + Q AYGG G V + E+W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLE
YSQ_02255 +461492 KNLDKHE-GHFRRDKGK-----FQCLAYGGNGKVESSEIWTMFRFSLQNT---ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLE +461789

Cj..6_1335 +501 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPK +600
PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILS++FE IQS+YLSLNEKEE LNLAIEKIDEFKNKLED++QMQDLYEIL PLL QFELNLARIYVLNPK
YSQ_02255 +461192 PLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSNNFEKIQSVYLSLNEKEEYLNLAIEKIDEFKNKLEDIKQMQDLYEILSPLLIQFELNLARIYVLNPK +461489

Cj..6_1335 +601 TKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +657
TKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSQ_02255 +460892 TKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +461060

CjjRM3196_1335 vs: YSS_07230 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: No
Function: PseD protein

Score: 2232.00 bits: 966.62 e-value: 0.000000
length: 664 gaps: 17 id: 512 positives: 561 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
YSS_07230 +1351597 MTFIPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +1351894

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
YSS_07230 +1351897 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1352194

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
YSS_07230 +1352197 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +1352494

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
YSS_07230 +1352497 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +1352794

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTKVYNCTEGGARI+GTIEKPFLWACENLL KDL+KPFEKLEPLSLN
YSS_07230 +1352797 QNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKVYNCTEGGARIKGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1353094

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKVCKSI+HCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
YSS_07230 +1353097 KQNEFLLKAYYKVCKSIEHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +1353394

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
YSS_07230 +1353397 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRR*EKSFF +1353586

CjjRM3196_1335 vs: YSS_07245 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1542bp / 514aa PV: No
Function: hypothetical protein

Score: 1063.00 bits: 462.36 e-value: 0.000000
length: 631 gaps: 27 id: 294 positives: 381 coverage: 0.57 query coverage 0.44

Cj..6_1335 +11 FNKNIEALS----NillkeslkeiksskfelILGKDNLDINL-KDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALL +110
FNKN++ALS N L K+ + +F GKDNLDIN+ K +K +YQDPIKEL+ L + D + YPVL+FYGFGNGIL+K LL
YSS_07245 +1357367 FNKNLKALSGFEYNDLRKKLEDLKELREFTFTQGKDNLDINIIKKRNLKK---------MYQDPIKELEKNLEYFKD-FTRYPVLFFYGFGNGILYKILL +1357664

Cj..6_1335 +111 QNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHG +210
QN+ + I++FEK++E+I + +DFS +L RL++L+ +++ F R Y L + +YE + EDIL LNK + K + G
YSS_07245 +1357667 QNQALKRIIIFEKELELIFLALNFIDFSKDLSLGRLIILHHDDINLPKMDKVFRLIGDL-FYRSYNLHIANDFYEHYKEDILKLNKLNMQIIKNHNLMRG +1357964

Cj..6_1335 +211 NDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnn +310
NDP DA+QGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER +E FNN
YSS_07245 +1357967 NDPKDAMQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERDEIVAECFNN +1358264

Cj..6_1335 +311 dfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGAL +410
DFK+FDKD+ F++ S H T YL+KN R ++L+ F L LD++GY + G SV+HMAY L+ L HKNII IGQDLAYAK+G +H I L
YSS_07245 +1358267 DFKDFDKDIIFLVASLVHKKTISYLEKNQRKYILIIKGQPFARCLGLDNYGYINGGMSVSHMAYELAENLGHKNIILIGQDLAYAKDGQTHSQGFIHANL +1358564

Cj..6_1335 +411 DGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFL +510
E TTAYGG G V + E+W LFR IFE + + +K YNCT+GGARIE IEKPF CE+LL DK F+KL+ L +Q +
YSS_07245 +1358567 HNGDYERDLDRFSTTAYGGNGKVQSSEIWTLFRQIFENFIA----FSKSKTYNCTQGGARIESAIEKPFKELCEDLLKNKKDKKFKKLQVLNTKEQVKLG +1358864

Cj..6_1335 +511 LKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAI--EKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKS +610
LK Y K+ K + +F K + + +Q L + L L + ID+ K KL + + + L EILGP L + + L +Y+ + K D NK
YSS_07245 +1358867 LKIYQKIKKNMNLSLNFKK----ECKKVQKQIHNLTHGKNKLSLEQINQNIDKIKEKLSNKKYLF-LQEILGPTLHHEQSILTPLYLKDIKDDSDKQNKL +1359164

Cj..6_1335 +611 ILWIKEHLEFMELVYGHIKAQESALIKNILP +641
WI H ME + ++AQ+ L ILP
YSS_07245 +1359167 FAWIYAHESLMENIIELLEAQDKRLKIAILP +1359257

CjjRM3196_1335 vs: YSS_07160 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1953bp / 651aa PV: Yes
Function: PseD protein

Score: 2301.00 bits: 996.39 e-value: 0.000000
length: 653 gaps: 7 id: 526 positives: 566 coverage: 0.81 query coverage 0.79

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSS_07160 +1339246 MIFTPTQKELFNKNIEALGNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1339543

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVL+ L + + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
YSS_07160 +1339546 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQNARLMVLENDKLQAQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +1339843

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ TS
YSS_07160 +1339846 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +1340143

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ FV S+ +P+T KYLQKNNR F+L S +SFI + L +GY G SVAHMAY + HL +KNIIFIGQDLAYAK+G SH +
YSS_07160 +1340146 EFFNNDFGEFDKDILFVCISWVYPQTIKYLQKNNRAFILTSRPSSFIENINLCPYGYVGYGPSVAHMAYEFATHLNYKNIIFIGQDLAYAKDGFSHTKD- +1340443

Cj..6_1335 +401 IFGALDGEKK--ETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +500
+ LD + + Q AYGG G V + +W +FR + I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSL
YSS_07160 +1340446 -YKNLDKHEGHFQRDKGKFQCLAYGGNGKVESSGIWTMFRFSLQN---TISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSL +1340743

Cj..6_1335 +501 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKED +600
NKQNEFLLKAYYKVCKSIKHCRDF KILS+DFE IQSIYLSLNEKEED+NLAIEKIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKED
YSS_07160 +1340746 NKQNEFLLKAYYKVCKSIKHCRDFNKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKED +1341043

Cj..6_1335 +601 AFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +653
AFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSS_07160 +1341046 AFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1341202

CjjRM3196_1335 vs: YSS_07240 in RM4661 (Campylobacter coli RM4661, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2263.00 bits: 980.00 e-value: 0.000000
length: 652 gaps: 7 id: 513 positives: 560 coverage: 0.79 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSS_07240 +1355406 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +1355703

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
YSS_07240 +1355706 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +1356003

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
YSS_07240 +1356006 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTELTA +1356303

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
YSS_07240 +1356306 EFFNHDFGEFDKDIVFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +1356603

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
YSS_07240 +1356606 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +1356903

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIEKIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
YSS_07240 +1356906 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIEKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +1357203

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSS_07240 +1357206 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +1357359

CjjRM3196_1335 vs: YSU_02220 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1958bp / 652aa PV: No
Function: No annotation data

Score: 1161.00 bits: 504.63 e-value: 0.000000
length: 290 gaps: 8 id: 258 positives: 268 coverage: 0.75 query coverage 0.74

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
YSU_02220 +454840 MTFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +455137

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
YSU_02220 +454540 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +454837

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYV +290
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKH +KPDY
YSU_02220 +454240 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHDIKPDYA +454507

Score: 1043.00 bits: 453.73 e-value: 0.000000
length: 350 gaps: 4 id: 233 positives: 269 coverage: 0.75 query coverage 0.74

Cj..6_1335 +314 VWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETI +413
+ F++KS THPHT KYLQKNNR F+LVSTYASFI YLKLD FGYF+MGFSVAHM + L++HLK+KNII IGQDLAYAK+G +H I L E
YSU_02220 +453929 IVFIVKSVTHPHTIKYLQKNNRAFILVSTYASFIQYLKLDYFGYFNMGFSVAHMNFLLTIHLKYKNIILIGQDLAYAKDGQTHSQGFIHANLHNGDYERD +454226

Cj..6_1335 +414 SYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVC +513
TTAYGG G V + E+W LFR FE+D+ I+ YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV
YSU_02220 +453629 LDKFSTTAYGGNGKVQSSEIWTLFRHNFEKDIVNIKMNYHITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVY +453926

Cj..6_1335 +514 KSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +613
+SIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE
YSU_02220 +453329 QSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKE +453626

Cj..6_1335 +614 HLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +663
HLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV +FF
YSU_02220 +453029 HLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERVRK*EKSFF +453176

CjjRM3196_1335 vs: YSU_02270 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1947bp / 649aa PV: Yes
Function: PseD protein

Score: 2269.00 bits: 982.59 e-value: 0.000000
length: 652 gaps: 7 id: 517 positives: 561 coverage: 0.80 query coverage 0.78

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
YSU_02270 +464985 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +465282

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ +RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAE FK
YSU_02270 +464685 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSHELQSARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAETFKNI +464982

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSL KQLPLLKKYA KATIFCADS+YPILAKHG+KPDYV LER T+
YSU_02270 +464385 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLIKQLPLLKKYANKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +464682

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFNNDF EFDKD+ F+ HP +YL+ RN ++ +F Y+ L DF Y +G SVAH YL+ +L HKNIIFIGQDLAYA+NGNSHPD++
YSU_02270 +464085 EFFNNDFGEFDKDIIFICAGVVHPKAIEYLK--GRNLVITQKVLAFPYYINLKDFSYAAVGLSVAHTLSYLATYLSHKNIIFIGQDLAYAENGNSHPDDY +464382

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + TTAYGG G V T+ +W LF+N FE ++ + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
YSU_02270 +463785 QNSA----NYESQMYEHILTTAYGGNGKVETHSIWLLFKNWFENEMIPNTRKMGITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +464082

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQSIYLSLNEKEED+NLAIEKID+FKNKLED++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
YSU_02270 +463485 KQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSIYLSLNEKEEDINLAIEKIDKFKNKLEDIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +463782

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHL+FMELVYGHIKAQESALIKNILPLEEKLKERKL+KWMERV
YSU_02270 +463185 FNKSILWIKEHLKFMELVYGHIKAQESALIKNILPLEEKLKERKLDKWMERV +463338

CjjRM3196_1335 vs: YSU_02210 in RM5611 (Campylobacter coli RM5611, complete genome.)
Gene length: 1917bp / 639aa PV: No
Function: PseD protein

Score: 2237.00 bits: 968.78 e-value: 0.000000
length: 652 gaps: 17 id: 515 positives: 558 coverage: 0.81 query coverage 0.77

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
M F PTQKELFNKNIEALSNILLKE LKEIKSSKFEL+LGKDNLDINLKDTS LY++ I EL TMLNTYNDKYLLYPVLYFYGFGNGIL
YSU_02210 +451026 MIFTPTQKELFNKNIEALSNILLKEGLKEIKSSKFELVLGKDNLDINLKDTS--------DNTFLYENVIDELNTMLNTYNDKYLLYPVLYFYGFGNGIL +451323

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +RLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHEDILGLNKKLAENFK S
YSU_02210 +450726 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQSARLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDILGLNKKLAENFKNS +451023

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+S+GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
YSU_02210 +450426 IVSYGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +450723

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFDKD+ FV HP +YL+ NR ++++ Y F Y+KL F + SVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
YSU_02210 +450126 EFFNHDFGEFDKDIVFVCAGVVHPKAIEYLKGRNRKYLIIPRYLYFPIYIKLKYFDFLYNTPSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +450423

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
+ E+ Y+ + T AYGG+ + T+EVW F+ I E + I+ ++ T YNCTEGGARIEGTIEKPFLWACENLLHKDL+KPFEKLEPLSLN
YSU_02210 +449826 ----QNSANYESQMYEHILTEAYGGKKEIKTHEVWIFFKQILEAMI--IKYHITT--YNCTEGGARIEGTIEKPFLWACENLLHKDLNKPFEKLEPLSLN +450123

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDA +600
KQNEFLLKAYYKVCKSIKHCRDFSKILS+DF NIQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDA
YSU_02210 +449526 KQNEFLLKAYYKVCKSIKHCRDFSKILSNDFNNIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDA +449823

Cj..6_1335 +601 FNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +652
FNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
YSU_02210 +449226 FNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +449379

CjjRM3196_1335 vs: A6K30_02235 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1766bp / 588aa PV: Yes
Function: PseD protein

Score: 1164.00 bits: 505.93 e-value: 0.000000
length: 263 gaps: 0 id: 235 positives: 247 coverage: 0.77 query coverage 0.68

Cj..6_1335 +38 ILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +137
ILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ
A6.._02235 +453001 ILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQ +453298

Cj..6_1335 +138 KSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAK +237
+RLMVL T L+I+ + CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK SI+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+K
A6.._02235 +452701 SARLMVLNTNKLEIQDYNELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNSIVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSK +452998

Cj..6_1335 +238 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
RK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVLSLER+ TS
A6.._02235 +452401 RKGISDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVLSLERIPLTS +452587

Score: 904.00 bits: 393.77 e-value: 0.000000
length: 346 gaps: 24 id: 220 positives: 251 coverage: 0.77 query coverage 0.68

Cj..6_1335 +322 THPHTTKYLQKNNRNFML--VSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSL-----HLKHKNIIFI--------GQDLAYAKNGNSHPDEHIF-GAL +421
+P+T KYLQKN +L S +SFI + + F + M A Y ++ HL +KN F+ D Y K+ +HPD++ G
A6.._02235 +452144 VYPQTIKYLQKNKIEHILYYTSRPSSFIETISI--FAHMAM*VKWAKCCYNMAYEFDIRHLNYKNYSFL*DRI*LMQKMDFPYTKDYKTHPDDYQHEGHF +452441

Cj..6_1335 +422 DGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFL +521
+K E I Q AYGG G V + + + ++ Q+ I K + + YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFL
A6.._02235 +451844 QRDKGEHI----QCLAYGGNGKVESSGILDYVLDLSLQNT--ISKNIVSTTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFL +452141

Cj..6_1335 +522 LKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSIL +621
LKAYYKVCKSIKHCRDF KILS+DFE IQ IYL LN+KE DLNLAI KIDEFKNKLE+++QMQDLYEIL PL TQFELNLARIYVLNPKTKEDAFNKSIL
A6.._02235 +451544 LKAYYKVCKSIKHCRDFNKILSNDFEKIQNIYLNLNKKENDLNLAIRKIDEFKNKLENIKQMQDLYEILQPLRTQFELNLARIYVLNPKTKEDAFNKSIL +451841

Cj..6_1335 +622 WIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +667
WIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A6.._02235 +451244 WIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +451379

CjjRM3196_1335 vs: A6K30_02165 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1941bp / 647aa PV: No
Function: PseD protein

Score: 2215.00 bits: 959.29 e-value: 0.000000
length: 664 gaps: 17 id: 509 positives: 558 coverage: 0.79 query coverage 0.76

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS LY++ I EL +MLNTYNDKYLLYPVLYFYGFGNGIL
A6.._02165 +440734 MTFTPTQKELFNKNIEALSNILLKESLKEIKSSKFELILGKDNLDINLKDTS--------DNTFLYENVIDELNSMLNTYNDKYLLYPVLYFYGFGNGIL +441031

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFS ELQ SRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK S
A6.._02165 +440434 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSSELQNSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNS +440731

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETS +300
I+SHGNDPLDALQGIEQFVYNLP MITHPSYKELL+KRK +SDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYV LER T+
A6.._02165 +440134 IVSHGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKGVSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVCMLERTEITA +440431

Cj..6_1335 +301 effnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEH +400
EFFN DF EFD + F++KS HP YL K NF +VSTYASFI YLKLD FGYF+MGFSVAHMA YLSLHL HKNIIFIGQDLAYA+NGNSHPD++
A6.._02165 +439834 EFFNHDFGEFDNGICFIIKSIVHPNAINYLTKKTDNFTIVSTYASFIQYLKLDYFGYFNMGFSVAHMACYLSLHLNHKNIIFIGQDLAYAENGNSHPDDY +440131

Cj..6_1335 +401 IFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLN +500
A E+ Y+ + T AYGG+ + T+ VW +F+ EQDV+KIQKYLDTK+YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLN
A6.._02165 +439534 QNSA----NYESQMYEHILTEAYGGKEKIKTHHVWLMFKRNLEQDVQKIQKYLDTKIYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLN +439831

Cj..6_1335 +501 KQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED---LNLAIEKIDEFKNKLEDMEQMQ-DLYEILGPLLTQFELNLARIYVLNPKT +600
KQNEFLLKAYYKV +SIKHCRDF ++ I+ + SL +++ + I+ ID+ K +++++ Q DL +ILGPLLTQFELNLARIYVLNPKT
A6.._02165 +439234 KQNEFLLKAYYKVYQSIKHCRDFNDNFIKVYDKIKNSFTSLQNSQKNEIFIQEIIQDIDKTKTQIDELYNTQKDLIQILGPLLTQFELNLARIYVLNPKT +439531

Cj..6_1335 +601 KEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVEGERGTFF +664
KEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KW ERV +FF
A6.._02165 +438934 KEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWTERVRR*EKSFF +439123

CjjRM3196_1335 vs: A6K30_02155 in YH501 (Campylobacter coli strain YH501, complete genome.)
Gene length: 1977bp / 659aa PV: Yes
Function: PseD protein

Score: 1192.00 bits: 518.00 e-value: 0.000000
length: 291 gaps: 0 id: 260 positives: 273 coverage: 0.74 query coverage 0.73

Cj..6_1335 +1 MTFIPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +100
MTF PTQKELFNKNIEAL NILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGY ENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL
A6.._02155 +436925 MTFTPTQKELFNKNIEALNNILLKESLKEIKSSKFELILGKDNLDINLKDTSIKNNGGGYNENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGIL +437222

Cj..6_1335 +101 FKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYS +200
FKALLQNKNHQHIVVFEKDIEIIW++FHILDFSNELQ +RLMVL+ L + ++ CSSKPFFQFSRIYFLEL+SHYYERFHED+L LNKKLAENFK
A6.._02155 +436625 FKALLQNKNHQHIVVFEKDIEIIWVIFHILDFSNELQNARLMVLENDKLQTQDYTELCSSKPFFQFSRIYFLELMSHYYERFHEDVLELNKKLAENFKNI +436922

Cj..6_1335 +201 IISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVL +291
I+ GNDPLDALQGIEQFVYNLP MITHPSYKELL+KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADS+YPILAKHG+KPDYVL
A6.._02155 +436325 ILRNGNDPLDALQGIEQFVYNLPQMITHPSYKELLSKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSSYPILAKHGIKPDYVL +436595

Score: 140.00 bits: 64.21 e-value: 0.000000
length: 123 gaps: 13 id: 46 positives: 68 coverage: 0.74 query coverage 0.73

Cj..6_1335 +314 VWFVLKSYTHPHTTKYLQ-----KNNRNFMLVSTYASFIN--YLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALD +413
+ F+ HP +YL+ N + ML+S + + +L + G + ++++A YLS HKNIIFIGQDLAYA+NGNSHPD++ A +
A6.._02155 +435985 IVFICAGVVHPKAIEYLKG*KFSHNSKSSMLLSILYTILKI*FLCML*HGLKCCTYDLSYLATYLS----HKNIIFIGQDLAYAENGNSHPDDYQNSA-N +436282

Cj..6_1335 +414 GEKKETISYDLQ-TTAYGGEGLV +436
E+ I ++ TAYGG G V
A6.._02155 +435685 YERHFQIDMNIF*RTAYGGNGKV +435751

Score: 536.00 bits: 235.03 e-value: 0.000000
length: 127 gaps: 0 id: 110 positives: 118 coverage: 0.74 query coverage 0.73

Cj..6_1335 +453 DTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIE +552
D YNCTEGGARIEGTIEKPFLWACENLL KDL+KPFEKLEPLSLNKQNEFLLKAYYKV +SIKHCRDFSKILS+DFE IQS+YL LNEKEED+NLAIE
A6.._02155 +435555 DITTYNCTEGGARIEGTIEKPFLWACENLLDKDLNKPFEKLEPLSLNKQNEFLLKAYYKVYQSIKHCRDFSKILSNDFEKIQSVYLGLNEKEEDINLAIE +435852

Cj..6_1335 +553 KIDEFKNKLEDMEQMQDLYEILGPLLT +579
KIDEFKNKLE+++QMQDLYEIL PL T
A6.._02155 +435255 KIDEFKNKLENIKQMQDLYEILQPLRT +435333

Score: 287.00 bits: 127.62 e-value: 0.000000
length: 72 gaps: 0 id: 70 positives: 71 coverage: 0.74 query coverage 0.73

Cj..6_1335 +580 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERV +651
QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQE ALIKNILPLEEKLKERKL+KWMERV
A6.._02155 +435173 QFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQENALIKNILPLEEKLKERKLDKWMERV +435386

CjjRM3196_1335 vs: CINS_1188 in NCTC 12927 (Campylobacter insulaenigrae NCTC 12927, complete genome.)
Gene length: 1908bp / 636aa PV: Yes
Function: putative motility accessory factor

Score: 1551.00 bits: 672.86 e-value: 0.000000
length: 627 gaps: 19 id: 357 positives: 448 coverage: 0.56 query coverage 0.54

Cj..6_1335 +10 LFNKNIEALSNillkeslkeiksskfelIL-GKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNK +109
+F KNI+AL N LK+ L +I+ I+ GKDNLDINL +T L+Y++ ++EL MLN Y +KY LYPVLYFYGFGNGIL+KALLQN+
CINS_1188 +1147940 MFAKNIQALLNPHLKQKLLQIQKQNKFQIIQGKDNLDINLLNTQ--------DNTLMYENTLEELNAMLNAYHEKYFLYPVLYFYGFGNGILYKALLQNQ +1148237

Cj..6_1335 +110 NHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDP +209
NH+HI+VFE D+E+I+ MF+ILDFS EL+++RL+++ T L + CS P F FSR YFLEL S YYE++++D+L +N L FK SI SHGN P
CINS_1188 +1147640 NHKHIIVFENDLELIYAMFQILDFSKELEEARLVIIDTNDLKRRDYDYLCSNDPMFNFSRTYFLELHSNYYEKYQDDVLRVNNNLLNSFKNSIFSHGNSP +1147937

Cj..6_1335 +210 LDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfk +309
+D LQGIEQFVYN+PSMI+ PSYKELL KRKNLSDTAIIVSTGPSL KQLPLLK+Y+SKATIFCADSAYPILAK+ +KPDYV LER+ T+EFFNNDF
CINS_1188 +1147340 IDVLQGIEQFVYNIPSMISNPSYKELLNKRKNLSDTAIIVSTGPSLIKQLPLLKQYSSKATIFCADSAYPILAKYNIKPDYVCMLERIDITAEFFNNDFG +1147637

Cj..6_1335 +310 efdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGE +409
EFDKD+ FVLKS HP KYL+K +++S + FIN++ L + GY G SVA MAY L+ L HKNIIFIGQDLAYA+NG+SHP ++ A
CINS_1188 +1147040 EFDKDIVFVLKSVVHPNAFKYLEKKQTKIVVISENSHFINFIDLQNLGYAYSGPSVANMAYKLATNLNHKNIIFIGQDLAYAENGDSHPKDYQNSA---- +1147337

Cj..6_1335 +410 KKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLK +509
E+ +Y+ + T AYGG +V T+ +W LF+N E+ + + + + YNCTEGGARIEG IEKPF CE LL K+L KPF KL+ L +NKQNE LLK
CINS_1188 +1146740 TFESDTYEHIDTLAYGGGYMVKTHFIWLLFKNEMEKLISRNE---NCATYNCTEGGARIEGAIEKPFKEICETLLSKNLHKPFAKLDTLNINKQNELLLK +1147037

Cj..6_1335 +510 AYYKVCKSIKHCRDFSKILSDDFENIQSIY--LSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSIL +609
AY K+ +SIK C D K + + + + L E LN I +D+ K K+E+ + M DLYEILGP + QFELNLARIYVLNPKTKED+FNKS+L
CINS_1188 +1146440 AYCKINQSIKKCVDLKKDFQKELDSLNKMMNDFLLSANERLLNDMILHVDKIKIKVENFKTMNDLYEILGPTIVQFELNLARIYVLNPKTKEDSFNKSVL +1146737

Cj..6_1335 +610 WIKEHLEFMELVYGHIKAQESALIKNI +636
WIKEHLE ++L+ HI AQ+ LIKNI
CINS_1188 +1146140 WIKEHLEWIQLIIAHINAQKLGLIKNI +1146218

CjjRM3196_1335 vs: CONCH_0163 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 1911bp / 637aa PV: Yes
Function: motility accessory factor

Score: 1397.00 bits: 606.43 e-value: 0.000000
length: 640 gaps: 39 id: 353 positives: 431 coverage: 0.55 query coverage 0.53

Cj..6_1335 +4 IPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKA +103
I QK +FNKN++AL NI LKE+LK+IK F+ I GKD LDIN NGGGY+ LY + + EL L YNDKYLLYPVLYFYGFGNGIL+KA
CONCH_0163 +145116 ITMQKHIFNKNLKALNNIKLKETLKKIKILNFKTIQGKDPLDINFI-----HNGGGYT---LYNNTLNELDEKLKLYNDKYLLYPVLYFYGFGNGILYKA +145413

Cj..6_1335 +104 LLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSL---DIE--FFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFK +203
LLQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL + SL DI+ FFSN PFF F RIYFL+L YYE++++DIL LN KL E K
CONCH_0163 +144816 LLQNKNRQKIVVFEKELEFIYLSFHYVDFSEELKNNSLIVLDSNSLQPIDIQILFFSN-----PFFNFLRIYFLDLNCNYYEKYQKDILKLNTKLQEHIK +145113

Cj..6_1335 +204 YSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLE +303
I+S GN DALQGIE FVYNLP +I+ S+ ELL KRKN +TAIIVSTGPSL KQLPLLK+YA A+IFCADSAYPILAK+ +KPDYVLSLERV+E
CONCH_0163 +144516 QIILSNGNSSQDALQGIENFVYNLPDIISNYSFNELLLKRKNQVNTAIIVSTGPSLIKQLPLLKQYANYASIFCADSAYPILAKYNIKPDYVLSLERVVE +144813

Cj..6_1335 +304 TSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPD +403
TSEFFNNDF EF+KD+ F+L H T +L NN + + + F YL L FG SVA MAY+L+L L KNIIFIGQDLAYA +G SHP+
CONCH_0163 +144216 TSEFFNNDFGEFNKDIVFILSNVVHKKTISFL--NNYKTVFLQRSSGFTRYLSLKKFGNLHSSPSVAIMAYFLTLNLNFKNIIFIGQDLAYADDGSSHPE +144513

Cj..6_1335 +404 EHIFGALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSL +503
E+ +G D + I Y L T AY G V T E W LF+ + E + + ++ YNCTEGGARI+ TIEKPF C+ LL +++ KPF KLE L
CONCH_0163 +143916 EYYYGKYDTYNPQEIDYSLTTLAYNGNHHVKTNETWLLFKQMLEFFISSSK--VNIATYNCTEGGARIDHTIEKPFKQTCKELLTEEIKKPFAKLEKLNE +144213

Cj..6_1335 +504 NKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLS-----LNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNP +603
NKQ E +LK++YK+ + IK C K + IYLS L E++ I+++D FKNK E++ L E+L PL TQFELNLARIYVLNP
CONCH_0163 +143616 NKQKELMLKSFYKIHQVIKLCDSLHK---------ECIYLSNRLNFLINDEKNFSSIIKELDHFKNKF---EKINFLNELLNPLNTQFELNLARIYVLNP +143913

Cj..6_1335 +604 KTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNIL +643
KTKED FNK LWIKEHLE +EL+ GHIK + +L KNI+
CONCH_0163 +143316 KTKEDVFNKNYLWIKEHLEWLELIIGHIKKLQESLEKNII +143433

CjjRM3196_1335 vs: CSUB8521_0178 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1399.00 bits: 607.30 e-value: 0.000000
length: 630 gaps: 15 id: 337 positives: 419 coverage: 0.52 query coverage 0.51

Cj..6_1335 +4 IPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKA +103
I K +F KN +AL N LKE L K F+++ G D LDIN NGGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KA
CS..1_0178 +160071 IKMNKNIFEKNTQALQNTKLKEKLLHFKQRNFQILQGSDPLDINFI-----HNGGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKA +160368

Cj..6_1335 +104 LLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIIS +203
LLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++
CS..1_0178 +159771 LLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILT +160068

Cj..6_1335 +204 HGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeff +303
GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV ETSEFF
CS..1_0178 +159471 KGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFF +159768

Cj..6_1335 +304 nndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFG +403
NNDF +FDKD+ FVL S HP T YL+KN R FM V S Y L F Y SVA MAY++++ L +K+IIFIGQDLAYA +G SHP E+ +G
CS..1_0178 +159171 NNDFGKFDKDIIFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYG +159468

Cj..6_1335 +404 ALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNE +503
D + I Y L+ +YGG + T W +F+ E+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E
CS..1_0178 +158871 KYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIE +159168

Cj..6_1335 +504 FLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKS +603
+LK++YK K+IK C + L + I L E + IE++D FK K+ + E + L ++ L TQFELNLARIYVLNPK KEDAFNK+
CS..1_0178 +158571 LMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINN-ELI--LRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKT +158868

Cj..6_1335 +604 ILWIKEHLEFMELVYGHIKAQESALIKNIL +633
+LWIKEHLE + ++ H KA + L KNI+
CS..1_0178 +158271 LLWIKEHLEWILMLNDHSKALKITLEKNII +158358

CjjRM3196_1335 vs: CSUB8521_0235 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 1926bp / 642aa PV: Yes
Function: putative motility accessory factor

Score: 1469.00 bits: 637.49 e-value: 0.000000
length: 649 gaps: 18 id: 360 positives: 444 coverage: 0.56 query coverage 0.54

Cj..6_1335 +5 PTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKAL +104
P QK LF KN +AL N LKE L K F+++ G D LDIN NGGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KAL
CS..1_0235 +207307 PMQKALFEKNTQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFI-----HNGGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKAL +207604

Cj..6_1335 +105 LQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISH +204
LQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I+S
CS..1_0235 +207007 LQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILTTNQNMQKYIKQAILSK +207304

Cj..6_1335 +205 GNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffn +304
GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV TSEFFN
CS..1_0235 +206707 GNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVDFTSEFFN +207004

Cj..6_1335 +305 ndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFM-LVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFG +404
NDF +FDKD+ FVLKS HP T KYL+K + + +S F YL L DFGY +MG SVA MAY L+L L+HKNIIFIGQDLAYAK+G SHP E+ +G
CS..1_0235 +206407 NDFGDFDKDIVFVLKSLVHPSTFKYLKKTQQPHIGTISDVRPFAYYLALKDFGYMEMGSSVATMAYILALKLEHKNIIFIGQDLAYAKDGSSHPKEYHYG +206704

Cj..6_1335 +405 ALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNE +504
D + I Y L YGG V T E W LF+ E + +++ T YN TEGGARIEGTIEKPF CE LL K L KPF KLE L NKQ E
CS..1_0235 +206107 KYDTYNPQEIDYSLTAIGYGGTHYVKTSETWMLFKTQLENIILNSKQH--TSTYNATEGGARIEGTIEKPFKQICEELLTKKLKKPFVKLEKLNQNKQKE +206404

Cj..6_1335 +505 FLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKS +604
+LKA+YKV K IK C IL + I L E + IE++D FK K +E++ L E++ PL TQFELNLARIYVLNPKTKEDAFNK+
CS..1_0235 +205807 LMLKAFYKVHKVIKICN----ILEKECLHIYNTLNFLSNDETNFKKIIEQLDHFKSK---IEKILILKELIDPLNTQFELNLARIYVLNPKTKEDAFNKT +206104

Cj..6_1335 +605 ILWIKEHLEFMELVYGHIKAQESALIKNILPleeklkerklNKWMERVE +653
+LWIKEHLE + ++ H KA + L KNI+ L ++L+ + L +++++++
CS..1_0235 +205507 LLWIKEHLEWILMLNDHSKALKITLEKNIINLAKELENQNLHQYIQKIK +205651

CjjRM3196_1335 vs: CSUB8523_1511 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1923bp / 641aa PV: Yes
Function: putative motility accessory factor

Score: 1403.00 bits: 609.02 e-value: 0.000000
length: 603 gaps: 27 id: 331 positives: 419 coverage: 0.52 query coverage 0.50

Cj..6_1335 +38 ILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +137
+ G DNLDIN+ D GGGY LY P++EL LN YNDKYLLYPVL+FYGFGNGIL+KALLQN NH+ I+VFE D+ II+ MF ++DFS EL+
CS..3_1511 +1479944 VQGDDNLDINIID------GGGYR---LYDKPLEELNKTLNLYNDKYLLYPVLFFYGFGNGILYKALLQNLNHKIILVFEPDVNIIYTMFKMIDFSKELK +1480241

Cj..6_1335 +138 KSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYE-RFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLA +237
+ RL++L +I N F F R YFLE+ YY+ +++E+IL LN + + K IIS G+DPLD LQGI++F+ N+P MI PSYKELL
CS..3_1511 +1479644 ENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDDKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIANPSYKELLN +1479941

Cj..6_1335 +238 KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRN +337
KRKNLS+TAIIVSTGPSLTKQL LLK+Y KA+IFCADSAYPILAK +KPDYV SLER TSEFFN DF EFDKD+ FV+KS THP T KYL+KN R
CS..3_1511 +1479344 KRKNLSETAIIVSTGPSLTKQLSLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNHDFGEFDKDILFVIKSVTHPNTIKYLEKNKRK +1479641

Cj..6_1335 +338 FMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWN +437
+M+VST F Y L+DFGYF+MG SVAHMA YLS+HLKH NIIFIGQDLAY G SHP ++ + ET +Y+ + YGG G V T++ W
CS..3_1511 +1479044 YMIVSTPEYFFKYCSLNDFGYFNMGWSVAHMACYLSVHLKHSNIIFIGQDLAYNDIGESHPKDY----QNSSTFETDTYEHIDVLGYGGIGYVKTHKTWI +1479341

Cj..6_1335 +438 LFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQS +537
F+ I E D+ K ++ K+YNCTEGGARI GTIE+PF CE LL KDL+KPF KLE L LNKQNE LLKAY+K+ KSI++ + K L + I
CS..3_1511 +1478744 FFKKILENDILTFNK-MNIKIYNCTEGGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSIRQYENLKKELCERNISINK +1479041

Cj..6_1335 +538 IYLSLNEKEEDLNLAIEK-IDEFKNKLEDMEQMQ-DLYE---ILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIK +637
L ++ NL I+ I F+ L+ ++ ++ +Y + GPL+ QFELNLARIYVLNPKT+ED++NKS+LWIKEHL+ ++L+ HI +Q+ L +
CS..3_1511 +1478444 NLLHID------NLDIQNSIHMFEFILKQIDAIKTSIYRCGLLNGPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQR +1478741

Cj..6_1335 +638 NIL +640
++
CS..3_1511 +1478144 SVV +1478150

CjjRM3196_1335 vs: CSUB8523_0172 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: motility accessory factor

Score: 1404.00 bits: 609.45 e-value: 0.000000
length: 630 gaps: 15 id: 338 positives: 420 coverage: 0.53 query coverage 0.51

Cj..6_1335 +4 IPTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKA +103
I K +F KNI+AL N LKE L K F+++ G D LDIN NGGGY+ LY + + EL LN YNDKYLLYPVLYFYGFGNGIL+KA
CS..3_0172 +155459 IKMNKNIFEKNIQALQNTKLKEKLLHFKQRNFQILQGNDPLDINFI-----HNGGGYT---LYNNSLSELNEKLNLYNDKYLLYPVLYFYGFGNGILYKA +155756

Cj..6_1335 +104 LLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIIS +203
LLQNKN Q IVVFEK++E+I++ FH+LDFS EL+ L++L TS +DI + CS+ PFF F R+YFL+L YYER++EDIL N+ + + K +I++
CS..3_0172 +155159 LLQNKNRQKIVVFEKELELIYLSFHLLDFSEELKNGALIILDTSLVDINIYNELCSTSPFFNFLRVYFLDLHCDYYERYQEDILKTNQNMQKYIKQTILT +155456

Cj..6_1335 +204 HGNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeff +303
GN DAL GIE ++YNLP +I+ S+KELL KRKN S AIIVSTGPSL KQLPLLK+YA KA+IFCADSAYPILAKH +KPDYVLSLERV ETSEFF
CS..3_0172 +154859 KGNSSQDALMGIENYIYNLPDIISNFSFKELLLKRKNSSKYAIIVSTGPSLIKQLPLLKQYANKASIFCADSAYPILAKHDIKPDYVLSLERVKETSEFF +155156

Cj..6_1335 +304 nndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFG +403
NNDF +FDKD+ FVL S HP T YL+KN R FM V S Y L F Y SVA MAY++++ L +K+IIFIGQDLAYA +G SHP E+ +G
CS..3_0172 +154559 NNDFGDFDKDIVFVLTSVIHPNTITYLRKNRRKFMFVQRLLSLDKYFNLKHFEYLIGCPSVANMAYFIAMKLDYKDIIFIGQDLAYANDGSSHPKEYHYG +154856

Cj..6_1335 +404 ALDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNE +503
D + I Y L+ +YGG + T W +F+ E+ + + LD YNCTEGGARIEGTIEKPF CE LL K+ K F KLE L KQ E
CS..3_0172 +154259 KYDTYNPQEIDYGLKILSYGGAKFISTTSTWIMFKTELEKKLSYAKNVLDITTYNCTEGGARIEGTIEKPFKQICEELLIKEPQKHFTKLEKLNSAKQIE +154556

Cj..6_1335 +504 FLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKS +603
+LK++YK K+IK C + L + I L E + IE++D FK K+ + E + L ++ L TQFELNLARIYVLNPK KEDAFNK+
CS..3_0172 +153959 LMLKSFYKTRKAIKIC----EYLEKECAFISNTLHFLSNDENNFKNIIEQLDTFKEKINN-ELI--LRSVIDSLNTQFELNLARIYVLNPKAKEDAFNKT +154256

Cj..6_1335 +604 ILWIKEHLEFMELVYGHIKAQESALIKNIL +633
+LWIKEHLE + ++ H KA + L KNI+
CS..3_0172 +153659 LLWIKEHLEWILMLNDHSKALKITLEKNII +153746

CjjRM3196_1335 vs: CVOL_0220 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1929bp / 643aa PV: Yes
Function: putative motility accessory factor

Score: 1555.00 bits: 674.59 e-value: 0.000000
length: 629 gaps: 15 id: 365 positives: 446 coverage: 0.57 query coverage 0.55

Cj..6_1335 +5 PTQKELFNKNIEALSNillkeslkeiksskfelILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKAL +104
P QK LF KNI+AL N+ LKE L+ K F++I+G D LDIN NGGGY LY+D + +L LN YNDKYLLYPVLYFYGFGNGIL+KAL
CVOL_0220 +187971 PMQKALFEKNIQALQNVKLKEKLQNFKKNNFKVIVGNDALDINFI-----HNGGGYR---LYEDVLLQLNEKLNLYNDKYLLYPVLYFYGFGNGILYKAL +188268

Cj..6_1335 +105 LQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQKSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISH +204
LQNKN Q IVVFEK++E I++ FH +DFS EL+ L+VL T ++I + CS PFF F R+YFL++ YYE+++EDIL N + K SI +
CVOL_0220 +187671 LQNKNRQKIVVFEKELEFIYLSFHYIDFSEELKNGALIVLDTNIININSYNEICSNSPFFNFLRVYFLDIHCDYYEKYQEDILNTNSNMQLHIKRSIYRY +187968

Cj..6_1335 +205 GNDPLDALQGIEQFVYNLPSMITHPSYKELLAKRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffn +304
GND D+L GIE F+YNLP +I+ S+K+L KRK LSD AIIVSTGPSL KQLPLLK+Y A+IFCADSAYPILAK G+KPDYVLSLERV ETSEFFN
CVOL_0220 +187371 GNDSQDSLMGIENFIYNLPKIISNYSFKQLCLKRKKLSDMAIIVSTGPSLIKQLPLLKQYTNYASIFCADSAYPILAKEGIKPDYVLSLERVKETSEFFN +187668

Cj..6_1335 +305 ndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNFMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGA +404
NDFKE DKDV FVLKS THP T +YL NNR + + Y F ++ L DFGY +MG SVA MAY+L+LHL+HKNIIFIGQDLAYAK+G SHP E+ +G
CVOL_0220 +187071 NDFKELDKDVLFVLKSLTHPNTFQYLNANNRKIIPATYYTFFTHFIGLHDFGYMNMGQSVATMAYFLALHLEHKNIIFIGQDLAYAKDGSSHPKEYYYGQ +187368

Cj..6_1335 +405 LDGEKKETISYDLQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEF +504
D + ISY L T AYGG+ V+T E+W LF+ E+ V + YL+T YNCTEGGARI+GTIEKPF CE LL K L+KPF KLE L NKQ E
CVOL_0220 +186771 YDTYDPKDISYHLTTIAYGGQDKVFTNEIWMLFKTQIEEAVFNAKTYLNTTTYNCTEGGARIKGTIEKPFKQICEQLLTKKLNKPFVKLEKLNQNKQKEL +187068

Cj..6_1335 +505 LLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSI +604
+LKA+YKV K+IK C K + + I+LS +EK + IE++D FK K+ E++ L E++ PL TQFELNLARIYVLNPKTKEDAFNK++
CVOL_0220 +186471 MLKAFYKVYKAIKICNTLEKECLHLYNTL--IFLSNDEK--NFKNVIEQLDYFKSKI---EKILILKELINPLNTQFELNLARIYVLNPKTKEDAFNKTL +186768

Cj..6_1335 +605 LWIKEHLEFMELVYGHIKAQESALIKNIL +633
LWIKEHLE + ++ HIKA + L KNI+
CVOL_0220 +186171 LWIKEHLEWILMLKDHIKALKITLEKNII +186255

CjjRM3196_1335 vs: CVOL_1306 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1902bp / 634aa PV: No
Function: putative motility accessory factor

Score: 1521.00 bits: 659.92 e-value: 0.000000
length: 607 gaps: 26 id: 349 positives: 428 coverage: 0.55 query coverage 0.52

Cj..6_1335 +38 ILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +137
I G DNLDINL +T L+Y++P++EL ML YN+KY LYPVLYFYGFGNGIL+KALLQNK H+ I+VFEKD+EII MF I+DFS ELQ
CVOL_1306 +1273458 IQGNDNLDINLLNTQ--------DNTLIYKNPLEELNAMLKIYNEKYCLYPVLYFYGFGNGILYKALLQNKRHKVIIVFEKDLEIIHTMFSIIDFSKELQ +1273755

Cj..6_1335 +138 KSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYERFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLAK +237
+ RL++ T L+I + C +P F+R YFLEL S YYER+H+DIL +N +AE K +++ +GN PLDALQGIEQF +NLP MI+ P+YKELL K
CVOL_1306 +1273758 EFRLVIADTNCLNILDYEIMCRQQPMLNFARTYFLELHSNYYERYHDDILQVNTNMAEYLKKAVLKYGNLPLDALQGIEQFTHNLPKMISCPTYKELLRK +1274055

Cj..6_1335 +238 RKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRNF +337
RKN DTAIIVSTGPSL+KQL LLK+YA KATIFCADSAYPILAK+ +KPDYVLSLERV TSEFFNNDF +FDKD+ F+LKSY + T KYL+KNNR +
CVOL_1306 +1274058 RKNSNDTAIIVSTGPSLSKQLSLLKRYANKATIFCADSAYPILAKYNIKPDYVLSLERVALTSEFFNNDFGDFDKDIIFILKSYIYKNTIKYLEKNNRKY +1274355

Cj..6_1335 +338 MLV-STYASFINYLKLDDFGYFDMGFSVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISY-----DLQTTAYGGEGLVYTQ +437
ML+ ST A FI + +L ++GY G SVA M L+ L HKNII IGQDLAY+ +G SH +E+ + L K+ Y + AYGGEG V +
CVOL_1306 +1274358 MLISSTDAKFIFFTQLHNYGYLATGCSVANMGTNLAFELGHKNIILIGQDLAYSNDGISHSNEYTY--LTDAYKDNKIYKRDYGKYECIAYGGEGKVQSS +1274655

Cj..6_1335 +438 EVWNLFRNIFEQDVEKIQKYLDTKVYNCTEGGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKI----LS +537
VW LFR FE D+ + Y DT VYNCTEGGARI G IEKPF CE LL K +K F LE LSLNKQNE +LKAY K+ KSI HC++ +K LS
CVOL_1306 +1274658 FVWTLFRQTFESDIALFKHY-DTTVYNCTEGGARITGAIEKPFKEICEKLLAKKSEKKFANLENLSLNKQNELMLKAYTKIKKSIVHCQELTKTFQEYLS +1274955

Cj..6_1335 +538 DDFENIQSIYLSLNEKEEDLNLAIEKIDEFKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESA +637
+ EN Q I ++DLN I IDE K ++ED + + +LYE+L PLL QFELNLARIYVLNP ++D +NKS+LWIKEH+ +EL+ HIKAQE A
CVOL_1306 +1274958 NLNENCQNIC-----SQKDLNYIINFIDEIKKEIEDTKNINELYEVLNPLLIQFELNLARIYVLNPINEDDIYNKSLLWIKEHISWLELIIAHIKAQEKA +1275255

Cj..6_1335 +638 LIKNILP +644
L NI+P
CVOL_1306 +1275258 LNDNIIP +1275276

CjjRM3196_1335 vs: CVOL_1208 in LMG 24379 (Campylobacter volucris LMG 24379, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation data

Score: 874.00 bits: 380.83 e-value: 0.000000
length: 336 gaps: 10 id: 203 positives: 245 coverage: 0.52 query coverage 0.50

Cj..6_1335 +38 ILGKDNLDINLKDTSIKNNGGGYSENLLYQDPIKELQTMLNTYNDKYLLYPVLYFYGFGNGILFKALLQNKNHQHIVVFEKDIEIIWIMFHILDFSNELQ +137
I G DNLDIN+ D GGGY LY P++EL LN YNDKYLLYP L+FYGFGNGIL+KALLQN NH+ I+VFE D+ II+ MF ++DFS EL+
CVOL_1208 +1175752 IQGNDNLDINIID------GGGYK---LYDKPLEELNKTLNLYNDKYLLYPALFFYGFGNGILYKALLQNPNHKIILVFEPDVNIIYTMFKVIDFSQELK +1176049

Cj..6_1335 +138 KSRLMVLQTSSLDIEFFSNFCSSKPFFQFSRIYFLELISHYYE-RFHEDILGLNKKLAENFKYSIISHGNDPLDALQGIEQFVYNLPSMITHPSYKELLA +237
+ RL++L +I N F F R YFLE+ YY+ +++E+IL LN + + K IIS G+DPLD LQGI++F+ N+P MI HPSYKELL
CVOL_1208 +1175452 ENRLLLLDPNNENINDLKNLFLNNLIFNFLRTYFLEIHCDYYDGKYQEEILKLNSLIQDAIKENIISIGDDPLDTLQGIKHFIQNIPKMIAHPSYKELLN +1175749

Cj..6_1335 +238 KRKNLSDTAIIVSTGPSLTKQLPLLKKYASKATIFCADSAYPILAKHGLKPDYVLSLERVLETSeffnndfkefdkdVWFVLKSYTHPHTTKYLQKNNRN +337
KRKNLSDTAIIVSTGPSLTKQLPLLK+Y KA+IFCADSAYPILAK +KPDYV SLER TSEFFNNDF EFDKD+ FV+KS THP T KYL+KN R
CVOL_1208 +1175152 KRKNLSDTAIIVSTGPSLTKQLPLLKQYQNKASIFCADSAYPILAKANIKPDYVFSLERTDFTSEFFNNDFGEFDKDILFVIKSVTHPNTIKYLEKNKRK +1175449

Cj..6_1335 +338 FMLVSTYASFINYLKLDDFGYFDMGFSVAHMAYYLS +373
+M+VST F Y L+DFGYF+MG SVAH+ ++
CVOL_1208 +1174852 YMIVSTPEYFFKYCSLNDFGYFNMGWSVAHILLFIG +1174957

Score: 543.00 bits: 238.05 e-value: 0.000000
length: 277 gaps: 17 id: 129 positives: 175 coverage: 0.52 query coverage 0.50

Cj..6_1335 +363 SVAHMAYYLSLHLKHKNIIFIGQDLAYAKNGNSHPDEHIFGALDGEKKETISYD-LQTTAYGGEGLVYTQEVWNLFRNIFEQDVEKIQKYLDTKVYNCTE +462
V ++ YLS+HLKH NIIFIGQDLAY G SHP ++ + ET +Y+ + YGG G V T++ W F+ I E D+ K ++ K+YNCTE
CVOL_1208 +1174803 GVLPISCYLSVHLKHGNIIFIGQDLAYNDIGESHPKDY----QNSSTFETDTYEHIDVLGYGGIGHVKTHKTWIFFKKILENDILTFNK-MNIKIYNCTE +1175100

Cj..6_1335 +463 GGARIEGTIEKPFLWACENLLHKDLDKPFEKLEPLSLNKQNEFLLKAYYKVCKSIKHCRDFSKILSDDFENIQSIYLSLNEKEED-----LNLAIEKIDE +562
GGARI GTIE+PF CE LL KDL+KPF KLE L LNKQNE LLKAY+K+ KS+++ + K L + I L ++ + L +++IDE
CVOL_1208 +1174503 GGARINGTIEEPFKQVCEKLLKKDLNKPFIKLENLNLNKQNELLLKAYFKIIKSVRQYENLKKELCERNISINKNLLHIDNLDIQNSIHIFELILKQIDE +1174800

Cj..6_1335 +563 FKNKLEDMEQMQDLYEILGPLLTQFELNLARIYVLNPKTKEDAFNKSILWIKEHLEFMELVYGHIKAQESALIKNIL +639
K + + GPL+ QFELNLARIYVLNPKT+ED++NKS+LWIKEHL+ ++L+ HI +Q+ L + I+
CVOL_1208 +1174203 IKTSIYRCGLLN------GPLIRQFELNLARIYVLNPKTQEDSYNKSMLWIKEHLDWIKLIIAHIDSQKEVLQRSIV +1174431