UPTC16701_1056 vs: UPTC4110_1065 in CCUG 22395 (Campylobacter lari CCUG 22395, complete genome.)
Gene length: 1260bp / 420aa PV: Yes
Function: hypothetical protein (DUF2920 domain)Score: 1754.00 bits: 760.43 e-value: 0.000000
length: 380 gaps: 1 id: 375 positives: 377 coverage: 0.89 query coverage 0.94
UP..1_1056 +1 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQniit +100
MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDI DAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQNIIT
UP..0_1065 +1028846 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDISDAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQNIIT +1029143
UP..1_1056 +101 ticntyninitnKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIKTNHNLFNYMKKKGGGDISTLPIIL +200
TICNTYNINITNKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIKTNHNLFNYM+ GGGDISTLPIIL
UP..0_1065 +1029146 TICNTYNINITNKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIKTNHNLFNYMRG-GGGDISTLPIIL +1029443
UP..1_1056 +201 IGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNILDEEHLQI +300
IGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNILDEEHLQI
UP..0_1065 +1029446 IGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNILDEEHLQI +1029743
UP..1_1056 +301 QAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIKKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +380
QAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTII+KESQVDGKFIKNLEHGMGMSLKMLINKELPIILE
UP..0_1065 +1029746 QAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIEKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +1029983
UPTC16701_1056 vs: UPTC3659_1299 in NCTC 11845 (Campylobacter lari NCTC 11845, complete genome.)
Gene length: 1239bp / 413aa PV: No
Function: hypothetical protein (DUF2920 domain)Score: 1431.00 bits: 621.10 e-value: 0.000000
length: 380 gaps: 8 id: 306 positives: 333 coverage: 0.74 query coverage 0.77
UP..1_1056 +1 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQniit +100
MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEI+AIVFLLPGLG DINDAYQNKLIYRVLENHNVIC+SVNYFC QCRPQNGAKLILD FDQNII
UP..9_1299 +1299267 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIKAIVFLLPGLGSDINDAYQNKLIYRVLENHNVICLSVNYFCIQCRPQNGAKLILDNFDQNIIA +1299564
UP..1_1056 +101 ticntyninitnKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIKTNHNLFNYMKKKGGGDISTLPIIL +200
+IC TYNIN NK F+ ++ FL+ EIEKLK + KD ++++S+T EP EYQNFGIMQALDCLQ L++ K N+F K + LP++L
UP..9_1299 +1299567 SICSTYNINTKNKTFEGIHEIALFLNSEIEKLKQLHIIPKDEIINLSITFEPTKNEYQNFGIMQALDCLQALAFTK---NIFFNNKVT-----TQLPVVL +1299864
UP..1_1056 +201 IGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNILDEEHLQI +300
+G+SHGGYVSHLMAKLMPWEIDG+IDNSSYAKVFLPLVGFTKE DFI Y+E S +D Y+ LKFNAFTKTHFTSNPNSPYYFSKAFRRIRNILDEEHLQI
UP..9_1299 +1299867 VGTSHGGYVSHLMAKLMPWEIDGIIDNSSYAKVFLPLVGFTKEFDFINYYETSLLDNNYQHLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNILDEEHLQI +1300164
UP..1_1056 +301 QAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIKKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +380
QAQFPKTIYRSYHS+QDLRFAPPEDKIQLYKTLKKLGFDADLTII+KESQVDGKFIKNLEHGMGMSLKMLINKELPIILE
UP..9_1299 +1300167 QAQFPKTIYRSYHSMQDLRFAPPEDKIQLYKTLKKLGFDADLTIIEKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +1300404
UPTC16701_1056 vs: UPTC16712_1086 in RM16712 (Campylobacter lari RM16712, complete genome.)
Gene length: 1240bp / 413aa PV: No
Function: No annotation dataScore: 598.00 bits: 261.77 e-value: 0.000000
length: 176 gaps: 0 id: 135 positives: 150 coverage: 0.74 query coverage 0.76
UP..1_1056 +1 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQniit +100
MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDI DAYQNKLIYRVLENHNVIC+SV+YFC QCRPQNGAKLILD FDQNII
UP..2_1086 +1069974 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDISDAYQNKLIYRVLENHNVICLSVDYFCIQCRPQNGAKLILDNFDQNIIA +1070271
UP..1_1056 +101 ticntyninitnKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIK +176
+IC TYNIN NK F+ ++ FL+ EIEKLK + KD ++++S+T EP EYQNFGIMQALDCLQ L++ K
UP..2_1086 +1070274 SICSTYNINTQNKTFKGIHEIALFLNSEIEKLKQLHIIPKDEIINLSITFEPTKNEYQNFGIMQALDCLQALAFTK +1070499
Score: 859.00 bits: 374.36 e-value: 0.000000
length: 187 gaps: 0 id: 169 positives: 180 coverage: 0.74 query coverage 0.76
UP..1_1056 +194 STLPIILIGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNIL +293
+ LP++L+G+SHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKE+DFI ++E S +D Y+ LKFNAFTKTHFTSNPNSPYYFSKAFRRIRNIL
UP..2_1086 +1070530 TQLPVVLVGTSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKELDFINFYETSLLDNNYQHLKFNAFTKTHFTSNPNSPYYFSKAFRRIRNIL +1070827
UP..1_1056 +294 DEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIKKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +380
DEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTII+KESQVDGKFIKNLEHGMGMSLKMLINKELPIILE
UP..2_1086 +1070830 DEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIEKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +1071088
UPTC16701_1056 vs: CD56_05580 in Slaughter Beach (Campylobacter lari strain Slaughter Beach, complete genome.)
Gene length: 1228bp / 409aa PV: No
Function: No annotation dataScore: 981.00 bits: 426.99 e-value: 0.000000
length: 286 gaps: 8 id: 215 positives: 241 coverage: 0.75 query coverage 0.77
UP..1_1056 +1 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQniit +100
MLQTKFFQIPSFDDIELN QRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVIC+SV+YFC QCRPQNGAKLILD FDQNII
CD56_05580 +1065807 MLQTKFFQIPSFDDIELNTQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVICLSVDYFCIQCRPQNGAKLILDNFDQNIIA +1066104
UP..1_1056 +101 ticntyninitnKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIKTNHNLFNYMKKKGGGDISTLPIIL +200
+IC TYNINI NK F+ ++ FL+ EIEKLK + KD ++++S+T EP EYQNFGIMQALDCLQ L++ K N+F K + LP++L
CD56_05580 +1066107 SICSTYNINIQNKTFKGIHEIALFLNSEIEKLKQLHIIPKDEIINLSITFEPTKNEYQNFGIMQALDCLQALAFTK---NIFFNNKVT-----TQLPVVL +1066404
UP..1_1056 +201 IGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAF +286
+G+SHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKE+DFI ++E S +D Y+ LKFNAFTKTHFTSNPNSPYYFSKAF
CD56_05580 +1066407 VGTSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKELDFINFYETSLLDNNYQHLKFNAFTKTHFTSNPNSPYYFSKAF +1066662
Score: 439.00 bits: 193.19 e-value: 0.000000
length: 102 gaps: 0 id: 92 positives: 93 coverage: 0.75 query coverage 0.77
UP..1_1056 +279 PYYFSKAFRRIRNILDEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIKKESQVDGKFIKNLEHGMGMSLKMLINKELPII +378
P F K NILDEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTII+KESQVDGKFIKNLEHGMGMSLKMLINKELPII
CD56_05580 +1066618 PIIFQKPLEEYVNILDEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIEKESQVDGKFIKNLEHGMGMSLKMLINKELPII +1066915
UP..1_1056 +379 LE +380
LE
CD56_05580 +1066918 LE +1066921
UPTC16701_1056 vs: CAQ16704_1077 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 1258bp / 419aa PV: Yes
Function: No annotation dataScore: 681.00 bits: 297.58 e-value: 0.000000
length: 195 gaps: 1 id: 151 positives: 166 coverage: 0.75 query coverage 0.79
UP..1_1056 +1 MLQTKFFQIPSFDDIELNIQRQSLLDFRIDYDDEKEIEAIVFLLPGLGGDINDAYQNKLIYRVLENHNVICVSVNYFCTQCRPQNGAKLILDSFDQniit +100
ML+T FFQIPSFDDIELNIQRQSLL+FRIDYDDEKE++AIVFLLPGLG DIND YQNKLIYRVLENHNVICVSV+YFC QCRPQNGAKLILD FDQN+I
CA..4_1077 +1041264 MLRTNFFQIPSFDDIELNIQRQSLLNFRIDYDDEKEVKAIVFLLPGLGSDINDTYQNKLIYRVLENHNVICVSVDYFCIQCRPQNGAKLILDEFDQNVIA +1041561
UP..1_1056 +101 ticntyninitnKYFQTYKDVFSFLDLEIEKLKTNNKLSKDNLVDISVTCEPPNGEYQNFGIMQALDCLQVLSYIKTNHNLFNYMKKKGGGDIST +195
+ICNT I+I NKYF YK+V +FLD EI KLK N L ++ L+DIS+TCEPPN EYQNFGIMQALDCLQVLSYIKTN NLF + GG ST
CA..4_1077 +1041564 SICNTCQIDINNKYFNNYKEVLTFLDTEIAKLKIKNILPENKLIDISITCEPPNNEYQNFGIMQALDCLQVLSYIKTN-NLFTFKIASWGGAYST +1041846
Score: 834.00 bits: 363.57 e-value: 0.000000
length: 191 gaps: 0 id: 165 positives: 178 coverage: 0.75 query coverage 0.79
UP..1_1056 +190 GGDISTLPIILIGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFTKEIDFIKYFEASFIDPKYKNLKFNAFTKTHFTSNPNSPYYFSKAFRRI +289
GG ++ LPIILIGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGF KEI+F+KY+EAS+IDPKY NLK N FTKTHFTSNPNSPYYFSKA RI
CA..4_1077 +1041826 GGGLTQLPIILIGSSHGGYVSHLMAKLMPWEIDGVIDNSSYAKVFLPLVGFAKEINFVKYYEASYIDPKYTNLKLNFFTKTHFTSNPNSPYYFSKAHYRI +1042123
UP..1_1056 +290 RNILDEEHLQIQAQFPKTIYRSYHSIQDLRFAPPEDKIQLYKTLKKLGFDADLTIIKKESQVDGKFIKNLEHGMGMSLKMLINKELPIILE +380
RNILDE+HLQIQAQFPKTIYRSYHS+QDLR APPEDKIQLY TL+KLGFDA LT+I+ E Q+DGKFIKNLEHGMGMSLKMLINKELPI+LE
CA..4_1077 +1042126 RNILDEDHLQIQAQFPKTIYRSYHSVQDLRLAPPEDKIQLYNTLQKLGFDACLTMIENENQIDGKFIKNLEHGMGMSLKMLINKELPIMLE +1042396