CPEL_1036 vs: UPTC3659_0779 in NCTC 11845 (Campylobacter lari NCTC 11845, complete genome.)
Gene length: 3408bp / 1136aa PV: No
Function: hemagglutinin domain-containing protein

Score: 3051.00 bits: 1319.91 e-value: 0.000000
length: 1151 gaps: 63 id: 753 positives: 881 coverage: 0.66 query coverage 0.67

CPEL_1036 +20 KKLTNHILLSSIVASLLFSPAFA-----LPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGIL +119
KKL NHI+LS + S+LFSP A LPSGGKFTHGTSG+IN+ GNNM I GN NSVIQWGGGF I VNF GN +NYLNIAHGTNKSTI G+L
UP..9_0779 +747057 KKLANHIILSGVTVSMLFSPLMAIDPNKLPSGGKFTHGTSGSININGNNMDIMGNGKNSVIQWGGGFSIGNKAQVNFIGNDQNYLNIAHGTNKSTIEGVL +747354

CPEL_1036 +120 NAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQEQGNSFSPVFKPN--GGNVVNMGGILDVKNITFQGNKVILNANTNYT----E +219
NA NNVFLINPNGVIITKTG INANRFVASTSSMS+ DM KFA +Q QG +FSPVFKPN GGNV+NMGG ++ + QGNKV+ NA T+Y E
UP..9_0779 +747357 NAGGNNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMWKFAKSTQVQGAAFSPVFKPNPKGGNVINMGGEINAASVVLQGNKVVSNAYTDYDKNLGE +747654

CPEL_1036 +220 KDKFISANNITLEGKEVYVDVGNINGDKIQNIKISAD-----KGSMYLNASGYYYNPNSFLVFDKYRNSNSNFKVYKYVGIGSVQDWWHFAKGWNDNKEG +319
K ISAN ITL+G EVYVDV ING+K+ + I KGSMYLNASGYYYNPNSF VFDKY N+N NFKVYKYVGIGS DWWHFAKGWN+NK+G
UP..9_0779 +747657 HSKQISANEITLQGNEVYVDVSSINGNKLGKLNIKGSNGNNFKGSMYLNASGYYYNPNSFKVFDKYTNTNNNFKVYKYVGIGSDVDWWHFAKGWNENKDG +747954

CPEL_1036 +320 FRNTASEYRLTNNINFGASEGKNYANYCIDGFECISMIIGVNYTNAFNKIFNGQGYKLENINININESGK-KQNVGIFGYINNATIENVNIDYKGGGINA +419
F+ ASEYRLTN+I+F AS GKNYANYCI C MI+G T AF K F+GQGY L NINI+IN + +Q+VG+FG +N ATI+N+++DY GGGINA
UP..9_0779 +747957 FKANASEYRLTNDIDFKASSGKNYANYCIGDLGCTNMIVGT--TGAFTKTFDGQGYTLSNINIDINVNDRIQQDVGLFGRVNEATIKNIDVDYMGGGINA +748254

CPEL_1036 +420 KYTPN---NSYIGVGGFIGIAENSTIRNISLKNINKITATNTF-------GVGGFIGIAEKNVNFKNILIDGGNTMKI------SSTGSN---VGGFIAS +519
+YT NS I VGGFIG +NS++ NISLKNI +ITAT F VGGFIG AEK F NI +DG MKI TG+ VGGFIAS
UP..9_0779 +748257 QYTTSGYYNSDINVGGFIGSIQNSSVENISLKNISEITATSIFTSKKPTINVGGFIGSAEK-AKFYNIRLDGNKMMKILNKIETDNTGTPNGYVGGFIAS +748554

CPEL_1036 +520 GSEGSIFENIYVKNINSIKSDIYNAggfiggtsssstNWKDFVFFKNIHIANIGAIDGLYSGGFIGSATGVKTenikieeinkilgknSAGGLAGILSPG +619
EG+ F+NIYV+NI SIKS+ I N D V F+ IHIANIG I+G SGGFIGSA GVKTENIKIE+I KI G SAGG AG LS G
UP..9_0779 +748557 ADEGTEFKNIYVENIESIKSE----SKGILDAGGFIGNAYD-VLFESIHIANIGDINGRSSGGFIGSAAGVKTENIKIEKIGKISGSYSAGGFAGELSGG +748854

CPEL_1036 +620 EYSDISINNIGIIESANSGGFAGAMDTGSnnnkkntiitnVYIKDINEIKA-INTSDAYAGGFIGKVSSINAPTGENTSNIFNNITIDKIGKFYIKSNSR +719
EY ISI I IES SGGFAG D+ + I+ NV+I++I+ I A +NT+ AYAGGFIG+++S+ +G+N + F NITID I Y++ NS
UP..9_0779 +748857 EYNKISIKGIKTIESPSSGGFAGIKDS----DHDSIIVKNVHIQNIDNINAKMNTTGAYAGGFIGQITSV---SGKNDTGTFENITIDGIKNIYVEGNSN +749154

CPEL_1036 +720 -AYTGGLIGiifnnfnanynfssinLFFDSNMRITGENHNVGKIIGKSTDSRLSFNNSNFYYIAENFAGSRSENYSGFNLQQYVKINEQQKYNEFTTKDQ +819
Y GGLIG ++ NFNANYNFS +NLFFDS MR+TG+NH VGKIIGKST ++L FNNSNFYYI +NFAGSRSENYSG LQQYVKINEQ+KYNEF TKDQ
UP..9_0779 +749157 FTYAGGLIGYVYTNFNANYNFSNVNLFFDSSMRVTGKNHGVGKIIGKSTSTKLNFNNSNFYYIVDNFAGSRSENYSGLALQQYVKINEQEKYNEFKTKDQ +749454

CPEL_1036 +820 TTKPNIGLFQSNNKELLDLPDVEKIKNEITILEK----DDLFkdtiqkeiiediikkYYFVDIKTLDDLLKTYNKLNSNNSKEERINFIKNHLLISKSEQ +919
TTKPN+G ++SN K L+LPDVEKIK EI ILEK DDLF++TI+KEIIEDI +KYYFVDIKTL++L+K Y+KLNSN +KEERI+FIKNHLL+SKSEQ
UP..9_0779 +749457 TTKPNVGTYESNQKVSLELPDVEKIKSEIAILEKNDQKDDLFEETIKKEIIEDITEKYYFVDIKTLEELIKAYDKLNSNSTKEERIDFIKNHLLVSKSEQ +749754

CPEL_1036 +920 EAKEVVESLDFLLAYKTNGLENAEKNGLLKNDETITANRAIQSNVKKTLSYEQDLIVDFLQNKKNGLKWLVDYTNNLLQELKNTQTALKDAILKYNAYVD +1019
EAKEVVESLDFLLAYKTNGLENAEKNG+LK++ T +AN+ IQ NVKKTLSYEQ+LIVDFL+N++NGLKWLV TNNLL++LK+TQ ALK+AILKYNAYVD
UP..9_0779 +749757 EAKEVVESLDFLLAYKTNGLENAEKNGILKDEATKSANKRIQDNVKKTLSYEQNLIVDFLKNEENGLKWLVGSTNNLLEDLKDTQAALKEAILKYNAYVD +750054

CPEL_1036 +1020 LINSNKAERDDAKLEAIKKNINKLIFQSKTLATEIDNKQIVLSKWQNKSKNDSNEHFVILGKFNYEQLIDNPNLNKPNGDGGKEPDVKPD-PEFPNIDLE +1119
LIN+NKAERDDAKLEA+++ I++L +S+ L +ID KQI+LS+WQ+KSK DSNEHFVILGKF+Y QLI P+LN+PNG+GGK+PD+KPD P P+ DLE
UP..9_0779 +750057 LINANKAERDDAKLEALREKIDQLTVESEKLGKQIDEKQIILSQWQDKSKKDSNEHFVILGKFDYGQLI-KPDLNEPNGEGGKDPDIKPDIPSAPD-DLE +750354

CPEL_1036 +1120 FEQTASLNL---ikyeeeeekeigetqgeqRSITCIVNDNYKTMNPCVVEY +1170
FEQTASLNL EEEEEKEIGET GEQR ITCIV DN+KTMNPC V +
UP..9_0779 +750357 FEQTASLNLIGDKAIEEEEEKEIGETDGEQRLITCIVSDNFKTMNPCAVGH +750507

CPEL_1036 vs: CPEL_1564 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3069bp / 1023aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1229.00 bits: 533.97 e-value: 0.000000
length: 534 gaps: 48 id: 315 positives: 362 coverage: 0.51 query coverage 0.46

CPEL_1036 +1 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +100
MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHI GNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN
CPEL_1564 +1608544 MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLN +1608841

CPEL_1036 +101 IAHGTNKSTIAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQ-EQGNSFSPVFKPN--GGNVVNMGGILDVKNITFQGNK +200
IAHGTNKSTIAGILNA NNVFLINPNGVIITKTGNINANRFVASTSSMSN+DMNKFAN+ EQG SFSPVFKPN GGNV+NMG I + ++ GNK
CPEL_1564 +1608244 IAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNI-NANDVLLIGNK +1608541

CPEL_1036 +201 VILNANTNYTEKD----KFISAN---NITLEGKEVYVDVGNINGDKIQNIKISA-DKGSMYLNASGYYYNPNSFLVFD-------KYRNSNSNFKVYKYV +300
V++ N +K K I NI L G E+Y D+ I + I+A DKGS+YLNA+GYYYNP SF FD N+NF KYV
CPEL_1564 +1607944 VLIQGYLNTKDKTFNQIKAIDEGKKANIHLVGNEIYADIATFK--DIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGINHNNTNFSNMKYV +1608241

CPEL_1036 +301 GIGSVQDWWHFAKGWNDNKEGFRNTASEYRLTNNINF------GASEGKNYANYCI----DGF----ECISMIIGVNYTNAFNKIFNGQGYKLENININI +400
GIGS DWWHFAKGWN+ FR A EYRL N+I+F G G+NYANY + DG E SMII NY F K F+GQGY L+NINI+
CPEL_1564 +1607644 GIGSDVDWWHFAKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMIINGNY---FTKTFDGQGYTLKNINIDT +1607941

CPEL_1036 +401 NESG-KKQNVGIFGYINNATIENVNIDYKGGGINAKYTPNNSYIGVGGFIGIAENSTIRNISLKNINKITATNTFGVGGFIGIAEKNVNFKNILIDGGNT +500
+ VGIFG I +TI+NVN+DY GGGI AK S +GGF+G++ + NISL N+ + T +GGF G + + NI ++
CPEL_1564 +1607344 TKLKYNPSHVGIFGAI-TSTIKNVNVDYMGGGIKAK-----SVGYLGGFVGLSYAGALLNISLSNMGYFSFTGGSFIGGFAGSLQDGIH-SNISLNNIGD +1607641

CPEL_1036 +501 MKISSTGSNVGGFIASGSEGSIFENIYVKNINSI +534
+ + + +GGF +G I+ NI + NI I
CPEL_1564 +1607044 ISVNNV-TFMGGFAGYLQDG-IYSNISLNNIGDI +1607143

Score: 426.00 bits: 187.58 e-value: 0.000000
length: 619 gaps: 67 id: 206 positives: 300 coverage: 0.51 query coverage 0.46

CPEL_1036 +530 NIHIANIGAID---GLYSGGFIGS-ATGVKTenikieeinkilgknS-AGGLAGILSPGEYSDISINNIGIIESAN---SGGFAGAMDTGSnnnkkntii +629
NI ++N+G G + GGF GS G+ + + + + GG AG L G YS+IS+NNIG I N +GGFAG N
CPEL_1564 +1607203 NISLSNMGYFSFTGGSFIGGFAGSLQDGIHSNISLNNIGDISVNNVTFMGGFAGYLQDGIYSNISLNNIGDISVNNVDSTGGFAGYAGIVKICNISLEK- +1607500

CPEL_1036 +630 tnVYIKDINEIKAIN--TSDAYAGGFIGKVSSINAPTGENTSNIFNNITIDKIGKFYIKSNS----RAYTGGLIGiifnnfnanynfssinLFFDSNMRI +729
I +IN I A N +++ G FI +VS ++ F NI + IG + ++ A GG IG + N +FF+ N++I
CPEL_1564 +1606903 ----IGNINRI-AYNGYEENSHVGAFIARVSKVD----------FSNIYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGDTKFENIF---IFFNPNIKI +1607200

CPEL_1036 +730 TGENHNVGKIIGKSTD-SRLSFNNSNFYYIAENFAGSRSE-NYSG-----FNLQQYVKINEQQKYNEFTTKDQTT-KPNIGLFQSNNKELLDLPDVEKIK +829
E GK G D + +FNN Y+ ++ A + ++ NY G ++ Y ++ Y +F +K T KP I S+N +L D+ K
CPEL_1564 +1606603 INETGLSGKFFGALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTIPNKPSDNDVILASDDLYK-- +1606900

CPEL_1036 +830 NEITILEKDDLFkdtiqkeiiediikkYYFVDIKTLDDLLKTYNKLN-SNNSKEERINFIKNHLLISKSEQEAKEVVESLDFLLAYKTNGLENAEKNGLL +929
D+ I + KK Y + + L D+LK +K N SN S+ +++ F+ + L S + +A EVV+SLDFLLAY+ NGL A K+
CPEL_1564 +1606303 ---------DIVDKIITDLYNSNTDKKIYNLYLVNLLDMLK--DKANYSNMSENQKVEFVAKYFL-SGDKTKALEVVQSLDFLLAYEKNGLSTASKDKF- +1606600

CPEL_1036 +930 KNDETITANRAIQSNVKKTLSYEQDLIVDFLQNKKNGLKWLVDYTNNLLQELKNTQTALKDAILKYNAYVDLINSNKAERDDAKLEAIKKNINKLIFQSK +1029
+ E + + +N K + + DL +FL+N LK L+ +N L LK +Q LK AI KYN YV IN N + +++A L ++K +++L S
CPEL_1564 +1606003 -DAEALNLKNTLLANTNKVIKNKNDL-SNFLEND---LKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSG +1606300

CPEL_1036 +1030 TLATEIDNKQIVLSKWQNKSKNDSNEHFVILGKFNYEQLIDNPNLNKPNGDGGKEPDVKPDPEFPNIDLEFEQTASLNLikyeeeeekeigetqgeqRSI +1129
LAT I N QI L WQ ++ + SN++F I+GKF+ L PNL K N G E D I +QT + EEEE +EI E QR+
CPEL_1564 +1605703 ELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTI-PNLEKLNNSSGIENDDYQKLS-RQIASSQKQTPTFKY---EEEETQEIDEAALTQRAR +1606000

CPEL_1036 +1130 TCIVNDNYKTMNPCVVEYY +1148
TCIV DN+KTMNPCVVE Y
CPEL_1564 +1605403 TCIVSDNFKTMNPCVVESY +1605457

CPEL_1036 vs: CPEL_0267 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 2928bp / 976aa PV: No
Function: hemagglutinin domain-containing protein

Score: 1465.00 bits: 635.77 e-value: 0.000000
length: 445 gaps: 17 id: 325 positives: 350 coverage: 0.55 query coverage 0.47

CPEL_1036 +16 LTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNN-MHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGIL +115
+ K HILLS +VASLLFSPAFALPSGGKFTHGTSGTI N M I GNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAG+L
CPEL_0267 +250392 MKTQNKTIQHILLSGVVASLLFSPAFALPSGGKFTHGTSGTITKPNNTTMNIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGVL +250689

CPEL_1036 +116 NAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQEQGNS-----FSPVFKPNGGNVVNMGGILDVKNITFQGNKVILNANTNYTEK +215
NA NVFLINPNGVII K G INANRFVASTSSM + M +FAN G + FSPVFKPNGGNVVNMGGILDVKNITFQGNKVILNANTNYTEK
CPEL_0267 +250692 NASGKNVFLINPNGVIIEKGGIINANRFVASTSSMDSKAMQEFANGQYANGKTIDYATFSPVFKPNGGNVVNMGGILDVKNITFQGNKVILNANTNYTEK +250989

CPEL_1036 +216 DKFISANNITLEGKEVYVDVGNINGDKIQNIKISADKGSMYLNASGYYYNPNSFLVFDKYRNSNSNFKVYKYVGIGSVQDWWHFAKGWNDNKEGFRNTAS +315
DKFISANNITLEGKEVY+DVGNINGDKIQNIKISADKGSMYLNASGYYYNPNSFLVFDKYRNSNSNFKVYKYVGIGSVQDWWHFAKGWNDNKEGFR A
CPEL_0267 +250992 DKFISANNITLEGKEVYIDVGNINGDKIQNIKISADKGSMYLNASGYYYNPNSFLVFDKYRNSNSNFKVYKYVGIGSVQDWWHFAKGWNDNKEGFRSVAN +251289

CPEL_1036 +316 EYRLTNNINFGASEGKNYANYCIDGFECISMIIGVNYTNAFNKIFNGQGYKLENINININESGKKQNVGIFGYINNATIENVNIDYKGGGI---NAKYTP +415
EYRLTNNINF + KNYANYCIDG C MI+ Y N FNK F+GQG+ L NINI+ + GIFG +NNAT +N+ IDY G I +++
CPEL_0267 +251292 EYRLTNNINFDG-KNKNYANYCIDGLGCTNMIVAAKYDNVFNKTFDGQGFVLSNINIDTTDITGADFSGIFGRVNNATFKNIKIDYNQGSIINNSDRFSY +251589

CPEL_1036 +416 NNSYIGVGGFIGIAENSTIRNISLKNINKITATNT--FGVGGFIG +460
N GGFIG +E S NISL+NIN I++ + VGGF+G
CPEL_0267 +251592 N-----AGGFIGYSEQSNFSNISLENINNISSKGSSWVFVGGFVG +251724

Score: 194.00 bits: 87.50 e-value: 0.000000
length: 731 gaps: 142 id: 207 positives: 288 coverage: 0.55 query coverage 0.47

CPEL_1036 +430 LKNINKITATNTFGVGGFIGIAEK--NVNFKNILID--GGNTMKISSTGS-NVGGFIASGSEGSIFENIYVKNINSIKSDIYNAggfiggtsssstNWKD +529
L NIN I T+ G F GI + N FKNI ID G + S S N GGFI SE S F NI ++NIN I S + W
CPEL_0267 +251442 LSNIN-IDTTDITG-ADFSGIFGRVNNATFKNIKIDYNQGSIINNSDRFSYNAGGFIGY-SEQSNFSNISLENINNISS--------------KGSSW-- +251739

CPEL_1036 +530 FVFFKNIHIANIGAIDGLYSGGFIGSATGVK-------TenikieeinkilgknSAGGLAGILSPGEYSDISINNIGIIESAN----------SGGFAGA +629
++ GGF+G +T K N ++ AGG G +S + D N I + N SGGF G+
CPEL_0267 +251742 -----------------VFVGGFVGGSTSSKFENIKINNINKIEVIGDEYSAFARAGGFIGHISTDKRNDTLFNKIELSNIDNIITNSSGDVSSGGFVGS +252039

CPEL_1036 +630 MDTGSnnnkkntiitnVYIKDINEIKAINTSD---AYAGGFIGKVSSINAPTGENTSNIFNNITIDKIGKFYIKSNSRAYTGGLIGiifnnfnanynfss +729
+ T + ++ + +I IK+ D A +GGF G +S N S FNNI I I + + ++Y G + N NF+
CPEL_0267 +252042 IRTRELFGMEKIRFFDITLSNIENIKSNAIGDESVASSGGFFGALSDDNGKV----SFEFNNIAIKNITSI-VATGNKSYASGFGNKEDSDKSNNSNFTN +252339

CPEL_1036 +730 inLFFDSNMRITGENHNVGKIIGKSTDSRLSFNNSNFYYIAENFAGSRSENYSGFNLQQYVKINEQQKYNEFTTKDQTTK-PNIGLFQSNNKELLDLPDV +829
I ++F+ N I+ + N I + + NN Y+ F G + +L K N + EF + K P I K LPDV
CPEL_0267 +252342 IFIYFNPNAVISANDKNNVDIF--TNLLKANTNNIQIYHKNGSFNGINNQH----DLSLLKKYNTNELEQEFANAIKGIKLPSINTPSNVGKP--SLPDV +252639

CPEL_1036 +830 EKIKNEITILEKDDLFkdtiqkeiiediikkYYFVDIKTLDDLLKTYNKLNSNNSKEERINFIK-NHLLISKSEQEAKEVVESLDFLLAYKTNGLENAEK +929
E IKNE + L K+ V LDD+L ++ N E + N ++I+ + +SLDFL K E+
CPEL_0267 +252642 EAIKNENIEFQNQWLNKE----------------VVQAILDDILNGKYRVSINKFGEIQFHVSSVNGVVIT-----LDSIKQSLDFLDKLK-------EE +252939

CPEL_1036 +930 NGLLKNDETITANRAIQSNVKKTLSYEQDLIVDFLQNKKNGLKWLVDYTNNLLQELKNTQTALKDAILKYNAYVDLINSNKAERDDAKLEAIKKNINKLI +1029
N + +E ++I + K L + + + N K L D N + T + ++ YN+YV I S + +D+ A IN L
CPEL_0267 +252942 NSTWEANEL----KSIYTKYNKALKIKDEFV--------NAQKHLFDNDKNSFYK---TYAEYEKELMLYNSYVKKIESGQMSINDSVFLASLDKINTL- +253239

CPEL_1036 +1030 FQSKTLATEIDNKQIV---LSKWQNKSKNDSNEHFVILGKFNYEQLIDNPNLNKPNGDGGKEPDV-KPD-PEFPNIDLEFEQTASLNL----ikyeeeee +1129
+K L + D + L K KN F LG F + + NP + PDV P+ PE P D +FEQTASLNL EEEEE
CPEL_0267 +253242 --AKILQEKRDKVNAIADNLNKENIAYKNYGYSNFKFLGDFATD-FVHNP----------QSPDVDTPNKPELPKYDQDFEQTASLNLIGDNAIEEEEEE +253539

CPEL_1036 +1130 keigetqgeqRSITCIVNDNYKTMNPCVVEY +1160
KEI E QR+ TCIV DN+KTMNPCVV Y
CPEL_0267 +253542 KEIDEAAITQRTKTCIVSDNFKTMNPCVVGY +253632

CPEL_1036 vs: CAQ16704_0012 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2751bp / 917aa PV: Yes
Function: hemagglutination domain protein

Score: 1105.00 bits: 480.48 e-value: 0.000000
length: 499 gaps: 38 id: 290 positives: 327 coverage: 0.51 query coverage 0.42

CPEL_1036 +20 KKLTNHILLSSIVASLLFSPAFA-----LPSGGKFTHGTSGTINVSGNNMHINGNKVN--SVIQWGGGFNINKGESVNFG--GNSKNYLNIAHGTNKSTI +119
KKLTNHI LS I SLLFSP A LPSGGKFTHGT+G+IN+ GN M ING N VIQWGGGFNI K V FG N NYLNIAHGT KSTI
CA..4_0012 +11530 KKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFTHGTTGSININGNTMNINGTTPNKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTI +11827

CPEL_1036 +120 AGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQ-EQGNSFSPVFKPNG-GNVVNMGGILDVKNITFQGNKVILNANTNYTE +219
AG+LNA NNVFLINPNGVIITKTG INANRFVASTSSM M FAN+ G SFSPVFKPN GNVVNMG I NIT QGNKV+L + NY
CA..4_0012 +11830 AGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPNKLGNVVNMGNI-KADNITLQGNKVVLGS-ENYNN +12127

CPEL_1036 +220 KDKFISANNITLEGKEVYVDVGNINGDKIQNIKISAD-KGSMYLNASGYYYNPNSFLVFDKYRNSNSNFKVYKYVGIGSVQDWWHFAKGWNDNKEGFRNT +319
+K + A NI LEG EVYVDV I+G+ +Q + + A KG YLNA GYYYNP SF VF K N NFK YVGIGS DWWHFAKGWN+NK GFR +
CA..4_0012 +12130 INK-VMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKGNAYLNANGYYYNPYSFSVFSKIS-GNNNFKKDAYVGIGSDVDWWHFAKGWNENKAGFRTS +12427

CPEL_1036 +320 ASEYRLTNNINFGASEGKNYANYCIDGFECISMIIGVNYTNAFNKIFNGQGYKLENINININE-SGKKQNVGIFGYINNATIENVNIDYKGGGINAKYTP +419
ASEYRLT +I+FG KNYANYCIDG C SMI+G + N F K F+GQGY L+NINI+ S + + VGIFGYIN+ATI+N+N+DY GGGI
CA..4_0012 +12430 ASEYRLTKDIDFGGNNNKNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGYINDATIKNINVDYMGGGIRT---- +12727

CPEL_1036 +420 NNSYIGVGGFIGIAENSTIRNISLKNINKITATNTFG----VGGFIGIAEKNVNFKNILIDGGNTMKISSTGSNVGGFIASGSEGSIFENIYVKNINSI +518
N+Y GGF G A T NISL NI I+ N+ G V GF G A F NI ++ N IS G GGF +G IF NI + +I I
CA..4_0012 +12730 -NTY--AGGFAGSAS-GTFSNISLNNIGNISG-NSNGDQSFVAGFAGFAGG--TFSNISLN--NIGDIS--GYHAGGF--AGWLAGIFTNISLHDIGNI +13024

Score: 351.00 bits: 155.22 e-value: 0.000000
length: 569 gaps: 77 id: 181 positives: 275 coverage: 0.51 query coverage 0.42

CPEL_1036 +573 AGGLAGILSPGEYSDISINNIGIIESANSG------GFAG-AMDTGSnnnkkntiitnVYIKDINEIKAINTSDAYAGGFIGKVSSINAPTGENTSNIFN +672
AGG AG S G +S+IS+NNIG I G GFAG A T SN + + +I +I S +AGGF G ++ I F
CA..4_0012 +12715 AGGFAGSAS-GTFSNISLNNIGNISGNSNGDQSFVAGFAGFAGGTFSN----------ISLNNIGDI-----SGYHAGGFAGWLAGI-----------FT +13012

CPEL_1036 +673 NITIDKIGKFYIKSN-SRAYTGGLIGiifnnfnanynfssinLFFDSNMRITGENHNVGKIIGKSTDSRLSFNNSNFYYIAENFAGSRSE-NYSG----- +772
NI++ IG I N S GG G N+ + +FF+ N +I+G GK G+ + NN Y+ + + ++ NY G
CA..4_0012 +13015 NISLHDIGN--ISGNKSHGIAGGFAGSYENDSTFKNIY----IFFNPNAKISGRAP--GKFFGQPFWTA-HLNNIHIYHSRNDLTNAITDRNYWGNTNDK +13312

CPEL_1036 +773 FNLQQYVKINEQQKYNEFTTKDQTTKPNIGLFQSNNKELLDLPDVEKIKNEITILEKDDLFkdtiqkeiiediikkYYFVDIKTLDDLLKTYNKLN-SNN +872
++ Y N+Q Y +F +K T L +V+ L+++DL ++ + + I + +Y ++I L ++LK K N +N
CA..4_0012 +13315 IQIHTYNNSNQQSSYQDFLSKANTISRPTPPSNPTTPPNLTDTNVK--------LDENDLHQNIVNEIINDITNN-HYEINIANLLNMLKE--KTNYTNM +13612

CPEL_1036 +873 SKEERINFIKNHLLISKSEQEAKEVVESLDFLLAYKTNGLENAEKNGLLKNDETITANRAIQSNVKKTLSYEQDLIVDFLQNKKNGLKWLVDYTNNLLQE +972
+E++ NFI + L + + A EVV+SLDFLLAY+ NGL A + N ++ + +N KK + + DL DFL L +VDY N+ +
CA..4_0012 +13615 NEEQKANFIAKYFLKGNTTK-ALEVVQSLDFLLAYENNGLSTASNDKFEANG--LSVKNTLVTNTKKVIKNKNDLF-DFLSGDLKNL--VVDYNQNI-TD +13912

CPEL_1036 +973 LKNTQTALKDAILKYNAYVDLINSNKAERDDAKLEAIKKNINKLIFQSKTLATEIDNKQIVLSKWQNKSKNDSNEHFVILGKFNYEQLIDNPNLNKPNGD +1072
LK Q LK AI KYN YV +N N + ++DA L ++K +++L SK L I++ Q +L WQ K+ DSN HF I G+F L+ PNL++ +
CA..4_0012 +13915 LKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKGEFKNLALLT-PNLDEVIVN +14212

CPEL_1036 +1073 GGKEPDVKP-DPEFPNIDLEFEQTASLNLikyeeeeekeigetqgeqRSITCIVNDNYKTMNPCVVEYY +1141
G + D K + N +QT + +YEE E++E+ ET Q+ CIV DN+KTMNPC+V +
CA..4_0012 +14215 GNENEDYKKVSRQVANAQ---KQTPTF---EYEENEKEEVEETALMQKGKICIVSDNFKTMNPCIVRSF +14419