UPTC3659_1146 vs: UPTC4110_1147 in CCUG 22395 (Campylobacter lari CCUG 22395, complete genome.)
Gene length: 4578bp / 1526aa PV: No
Function: hemagglutinin domain-containing protein

Score: 1808.00 bits: 783.73 e-value: 0.000000
length: 977 gaps: 141 id: 526 positives: 608 coverage: 0.68 query coverage 0.81

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISI-----NGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKST +119
KKL+ +I+LS + S+LFS ALPSGGKFTHGTSGSISI N MN++GN NS+IQWGGGFNIANGEKVNFGN F+GQQNYLNIAHGT KST
UP..0_1147 +1113216 MKKLANHIILSGVTVSMLFSPLMALPSGGKFTHGTSGSISIDKTNPNKPIMNVSGNGANSVIQWGGGFNIANGEKVNFGNNNFKGQQNYLNIAHGTNKST +1113513

UP..9_1146 +120 IAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEF---KAQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKK +219
IAGILEAGNNNVFLINPNGVIITKTG INANRFVAST+S+ ++ +EF K +FSPVFKPN GGNVVNMG INAKNVTLQGN VMLSADTSWD K
UP..0_1147 +1112916 IAGILEAGNNNVFLINPNGVIITKTGNINANRFVASTSSMDSKSMQEFADGKLAYNTFSPVFKPN--GGNVVNMGSINAKNVTLQGNTVMLSADTSWDDK +1113213

UP..9_1146 +220 NNKIKLNQITADSIDLKGNEVYVDISTINSKNLTTDAK-KGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAKGWNEKDDFRN +319
NNKIKLNQITADSIDLKGNEVYVDISTINSKNLTT+AK KGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAKGWNEK+ FRN
UP..0_1147 +1112616 NNKIKLNQITADSIDLKGNEVYVDISTINSKNLTTEAKNKGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAKGWNEKEAFRN +1112913

UP..9_1146 +320 NVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFGKADGANFANINV +419
++LTNDIDFKASSGQNYANYWIDLNGD KK ANEFTNMIVGF DNSAF K FDGQGFTLKNINIDTTKL DNNSKNYIGLFGKADGANFANINV
UP..0_1147 +1112316 --TASEYRLTNDIDFKASSGQNYANYWIDLNGDCKKDANEFTNMIVGFTDNSAFTKIFDGQGFTLKNINIDTTKLPDNNSKNYIGLFGKADGANFANINV +1112613

UP..9_1146 +420 DYKNGGINASNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTAS-------VGGFAGQING---GTFCnisinkinkiynT--------GEESFT-- +519
DYKNGGINASN+YVGGF G ID G +++ NI INNN + S GGFAG NG + + N K T G +S T
UP..0_1147 +1112016 DYKNGGINASNEYVGGFAGYID-GFVDGVSLKNINYINNNVDITLNSGYMTYYGTGGFAGDANGMFRNIYLDNIQNINVKANLTDNSKIPDDGYDSRTML +1112313

UP..9_1146 +520 ----GGFAGWIKQDPYFEQIIINNID--SIKSESDIIN-LPT--VSSGGFAGWISGGKYNNIAVMDVDEIIAISTHH-------GTSGGFAGWIRGGKYN +619
GGFAG FE I I N + E++ N PT +S GGF G +GG Y+ I + ++ +I A+S T GGFAG G Y
UP..0_1147 +1111716 NYGVGGFAGITFG--MFENIHIKNSGNFELSYETNPGNRYPTYGISIGGFTGNATGGIYDGILLQNIKDIKAVSLNNSNNILAGSTIGGFAGRTSSGSYK +1112013

UP..9_1146 +620 NIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasd--------gNFENISINDVKNISSVGS---A +719
NI + + D + +YG GGF G I G++ IS+ DI I S + A + G F NI IN++K I + G +
UP..0_1147 +1111416 NINI--------DKLDNIYNYGQGGATGGFVGTIDGGDYYTISLNDIGKINSIMNKYENSFIPASGYTGGFAGMINIGTFSNININNIKEIYTFGDHIYS +1111713

UP..9_1146 +720 GGFAGRISGS--------KFENISINDV--------KNISSTTSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISLNH +819
GGF+G I + F +I IN++ K S+ AGGFAGY+ FS I+ + I NITA S S Y+GGFAG I NG F NIS+N
UP..0_1147 +1111116 GGFSGYIGSTWNSNIVDPIFNDIVINNIGALKADAAKGESTRAHAGGFAGYINSGKFSSISTDHINNITA---SAFYSSYAGGFAGYISNGSFSNISINT +1111413

UP..9_1146 +820 IQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGS-----------------------------HAGG +919
I++I++ N+ + YAGGFAG + G F ISI D+ I A D+ GG +GS AGG
UP..0_1147 +1110816 IEDIKAQ---ANDTNAYDSYKYAGGFAGEVSGGEFNKISIKDITEINA---------DVTGGGFAGSIKQSHVSGKAKAIYENIKIEDIDSIVVKVNAGG +1111113

UP..9_1146 +920 FAGYIN-YDKHSKPKFNNIYM--YFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATAD +996
FAG IN Y + KF NI + S +K S N AG FAG S++N + + S I + ++ N TAD
UP..0_1147 +1110516 FAGEINTYGSYGSGKFKNITINNIDQIKSTVKGGSYASAN-AGGFAG--SITNASSLEFSFIAL----NNIENITAD +1110744

Score: 1944.00 bits: 842.39 e-value: 0.000000
length: 983 gaps: 78 id: 514 positives: 623 coverage: 0.68 query coverage 0.81

UP..9_1146 +372 GFTLKNINIDTTKLSDNNSKNYI------GLFGKADGANFANINVD-------YKNGGINASNDYVGGFIGLIDKGIYSSITi-------nnikeinnnk +471
G L+NI D +S NNS N + G G+ + NIN+D Y GG GGF+G ID G Y +I++ + + N
UP..0_1147 +1111557 GILLQNIK-DIKAVSLNNSNNILAGSTIGGFAGRTSSGSYKNINIDKLDNIYNYGQGGA------TGGFVGTIDGGDYYTISLNDIGKINSIMNKYENSF +1111854

UP..9_1146 +472 kLRTASVGGFAGQINGGTFCnisinkinkiynTGEESFTGGFAGWIKQ-------DPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIA +571
+ GGFAG IN GTF NI IN I +IY G+ ++GGF+G+I DP F I+INNI ++K+++ +GGFAG+I GK+ I+
UP..0_1147 +1111257 IPASGYTGGFAGMINIGTFSNININNIKEIYTFGDHIYSGGFSGYIGSTWNSNIVDPIFNDIVINNIGALKADAAKGESTRAHAGGFAGYINSGKFSSIS +1111554

UP..9_1146 +572 VMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdg +671
++ I A + + +GGFAG+I G + NI++ +++I A+ D+ Y AGGFAGE+S GEFNKISIKDIT I ++ + AG G
UP..0_1147 +1110957 TDHINNITASAFYSSYAGGFAGYISNGSFSNISINTIEDIKAQANDT-NAYDSYKYAGGFAGEVSGGEFNKISIKDITEINADVTGGGFAGSIKQSHVSG +1111254

UP..9_1146 +672 N----FENISINDVKNISSVGSAGGFAGRIS-----GS-KFENISINDVKNISSTT--------SAGGFAGYLGNS---DFSFITLNNIENITANNKSRR +771
+ENI I D+ I AGGFAG I GS KF+NI+IN++ I ST AGGFAG + N+ +FSFI LNNIENITA+
UP..0_1147 +1110657 KAKAIYENIKIEDIDSIVVKVNAGGFAGEINTYGSYGSGKFKNITINNIDQIKSTVKGGSYASANAGGFAGSITNASSLEFSFIALNNIENITADLIHHD +1110954

UP..9_1146 +772 ESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYI +871
Y+GGFAG IYNGKFNNISLN IQNI+SSYTPENE++WFAK+ Y GGFAG I+ IFENISIYDVKNIHAINNAQYHG DIENGG S S+AGGFAGYI
UP..0_1147 +1110357 GFSYAGGFAGHIYNGKFNNISLNNIQNIKSSYTPENENKWFAKKAYVGGFAGSINSGIFENISIYDVKNIHAINNAQYHGGDIENGGKSSSYAGGFAGYI +1110654

UP..9_1146 +872 NYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGNEIQLHPYDDNNQGYIDFKTAALAAL +971
NY+ +SKPKFNNIY+YFTPNSI+KSES+LNE Y GKFAG+ISVS+N NPDIS IHIYHHKKDLTNATADQKYWGNEIQLHPYDDN QGYIDFKTAAL AL
UP..0_1147 +1110057 NYNNYSKPKFNNIYVYFTPNSIVKSESRLNEKYTGKFAGQISVSDNVNPDISNIHIYHHKKDLTNATADQKYWGNEIQLHPYDDNSQGYIDFKTAALTAL +1110354

UP..9_1146 +972 NGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLKAYSKID +1071
NGLKEIDCGA +KCLVFTSDFKVDNPNITSPDIPDFNAKQP+PLIPN EDIINE+ LD +DI+ N L QII++LKDKFY V+IN L++LLKAY+KID
UP..0_1147 +1109757 NGLKEIDCGASKKCLVFTSDFKVDNPNITSPDIPDFNAKQPEPLIPNTEDIINEKVVLDENDILDSNVL-NQIISELKDKFYAVDINTLNDLLKAYAKID +1110054

UP..9_1146 +1072 KDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKA------VMNFIKNDLNEK +1171
KDNP SKAEFLANYLLSKDKY ++ ERL+IA SMIQSLDFLLAYQ N G K +DD +A Q + E N+A V NFI+ NE
UP..0_1147 +1109457 KDNPASKAEFLANYLLSKDKYSEN-ERLEIARSMIQSLDFLLAYQDN--GLDKASDDKFASKKAIQVKNDILAEVFTASNQANANKDKVNNFIQYLNNEV +1109754

UP..9_1146 +1172 TkdskdllkqllakqkeldSAVK-AYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFANAILI +1271
K + + AYN YV+LIN+G+ SK D AFK + N L +LI++ AI + SD S G+F +KG + +
UP..0_1147 +1109157 NKINSANNNFKEKDYYKQLNDLALAYNKYVELINKGLASKDDQAFKDISNTLFALIAQVGKETEAIENLIKDFEGLKISVSDKSSGHFVVKGELSAIKIP +1109454

UP..9_1146 +1272 NPKLNEITNDSGNENDEYQKIS-----------RQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVG +1354
P L I +D G E Q A L EEEE EE++E S+ QK KTCIVSDNY+TMNPCV G
UP..0_1147 +1108857 YPILASIKDDNGGGEIEIPDKPIDPVEPPIDGFEQTASLNLIGNETLNEEEEQEEIDETSLLQKSKTCIVSDNYKTMNPCVAG +1109103

UPTC3659_1146 vs: CONCH_1474 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 3060bp / 1020aa PV: No
Function: hemagglutinin domain-containing protein

Score: 860.00 bits: 374.79 e-value: 0.000000
length: 613 gaps: 74 id: 273 positives: 347 coverage: 0.57 query coverage 0.45

UP..9_1146 +16 LTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTI +115
L KLS +I+LS I S+LFS ALPSGGKFTHGTSGSIS G MNI GN NS+IQWGGGFNI E+VNF S +NYLNIAHGTSKSTI
CONCH_1474 +1443269 LMMKTYKLSNHIILSGITVSMLFSPLMALPSGGKFTHGTSGSISTSGNNMNIMGNGTNSVIQWGGGFNIGKNEQVNFNGS----NKNYLNIAHGTSKSTI +1443566

UP..9_1146 +116 AGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFK-----AQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDK +215
GIL A NNVFLINPNGVIITKTGTINANRFVAST+S+ + F +G SFSPVFKP K GNVVNMGNIN +V L GNKV + ++
CONCH_1474 +1443569 EGILNASGNNVFLINPNGVIITKTGTINANRFVASTSSMSDDNMKAFANLKSFDEGLSFSPVFKPH-KAGNVVNMGNINTNDVLLIGNKVDIQGGRLGNE +1443866

UP..9_1146 +216 KNNKIKLNQITADSIDLKGNEVYVDISTIN-SKNLTTDAKKG------IAYLSATGYYYNPTRKYNDIIFT-TKGVMDK---TYNQYISIG-------SD +315
K L GNEV+VD ++ S + A KG + + Y + K N++ +T T G K ++ + ++IG
CONCH_1474 +1443869 KS-----------KTHLVGNEVFVDADSVKLSSTINVTALKGGYIQRQMINFANNNYSFGNNIKINNVDYTETNGQTHKGSSSFKKALTIGNMGDEKANT +1444166

UP..9_1146 +316 LDWWHFAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSG--------QNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTK +415
++WWHF+KGWNE N+ D F+L +DIDF G QNYANY ID G T MIVG D AF KTF+GQG+ LKNIN+D T
CONCH_1474 +1444169 IEWWHFSKGWNEGLGDTKNI--DEFRLVDDIDFSGNQGNGVEGKDWQNYANYCIDGLG--------CTSMIVGSTDTNAFTKTFNGQGYALKNINMDITT +1444466

UP..9_1146 +416 LSDNNSKNYIGLFGKADGANFANINVDYKNGGINASND------YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinki +515
L D YIG+FG +DGANF NIN+DY NG I + Y+GGFIG + + I++ NI+ I N + + VGGF G GTF NIS+N I
CONCH_1474 +1444469 LEDKSEYTYIGIFGNSDGANFKNINIDYMNGKIQKQKNVNDGWRYIGGFIGKSNNSFFEYISLSNIESISNSNRDDNSVVGGFIGSAS-GTFSNISLNNI +1444766

UP..9_1146 +516 nkiynTGEESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVS-SGGFAGWISGGKYNNIAVMDVDEIIAISTHHGT------SGGFAGWIRGG +615
I N+ +++ TGGFAG F I +NNI+ I S SD S +GGFAG + G + NI++ ++ I + +G +GGF G
CONCH_1474 +1444769 RNIENSADDTWTGGFAG--STLGTFSNISLNNIENISSYSDYGMYGGWSRAGGFAG-TTNGTFSNISLNNIKNISSRGGNYGNKYGNSYAGGFVGESYNS +1445066

UP..9_1146 +616 KYNNIAVMGVDEI +628
++NI++ +++I
CONCH_1474 +1445069 DFDNISLNSIEKI +1445105

Score: 184.00 bits: 83.19 e-value: 0.000000
length: 165 gaps: 17 id: 68 positives: 91 coverage: 0.57 query coverage 0.45

UP..9_1146 +602 GGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSVGS---AGGFAGRISGSKFENISINDVKNISSTT-------- +701
GGF G+ F IS+ +I IS S G ++ G F NIS+N+++NI GGFAG G+ F NIS+N+++NISS +
CONCH_1474 +1444529 GGFIGKSNNSFFEYISLSNIESISNSNRDDNSVVGGFIGSASGTFSNISLNNIRNIENSADDTWTGGFAGSTLGT-FSNISLNNIENISSYSDYGMYGGW +1444826

UP..9_1146 +702 -SAGGFAGYLGNSDFSFITLNNIENITA---NNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNI +766
AGGFAG N FS I+LNNI+NI++ N + Y+GGF GE YN F+NISLN I+ I
CONCH_1474 +1444829 SRAGGFAGTT-NGTFSNISLNNIKNISSRGGNYGNKYGNSYAGGFVGESYNSDFDNISLNSIEKI +1445021

Score: 565.00 bits: 247.54 e-value: 0.000000
length: 682 gaps: 142 id: 237 positives: 333 coverage: 0.57 query coverage 0.45

UP..9_1146 +664 GGFAGRISGSKFENISINDVKNISST-----TSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPE +763
GGF G+ S FE IS+ +++ IS + + GGF G + FS I+LNNI NI + + ++GGFAG G F NISLN I+NI SSY+
CONCH_1474 +1444529 GGFIGKSNNSFFEYISLSNIESISNSNRDDNSVVGGFIGSASGT-FSNISLNNIRNI----ENSADDTWTGGFAGSTL-GTFSNISLNNIENI-SSYS-- +1444826

UP..9_1146 +764 NEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSG-----SHAGGFAGYI---NYDKHS--------------------- +863
+ + AGGFAG +G F NIS+ ++KNI + GGN G S+AGGF G ++D S
CONCH_1474 +1444829 -DYGMYGGWSRAGGFAGTTNGT-FSNISLNNIKNISS------------RGGNYGNKYGNSYAGGFVGESYNSDFDNISLNSIEKITAYGAWGGYAGGFA +1445126

UP..9_1146 +864 -------KPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWG---NEIQLHPYDDNNQ--GYIDFKT +963
+ F NI++YF PN + + ++ +GK G++ +S NA D IHIYH KDL ATADQ YWG NEIQ+H YDD Q Y DF +
CONCH_1474 +1445129 GGVGYPYRASFSNIFIYFNPNITLNAR----KDSSGKLFGKLFLSHNAFLD--NIHIYHSDKDLHSATADQNYWGSTSNEIQIHTYDDSTQNNAYKDFLS +1445426

UP..9_1146 +964 AALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLK +1063
A I P +P KP+ P+ D L +DD+ ++ + +IIAD+ K Y + I +L ++L+
CONCH_1474 +1445429 KA-----------------------------DTIQKPILP------SKPIDPDNPD---SDVILSSDDLY-QDTITNEIIADIISKKYNIPIYLLLDMLE +1445726

UP..9_1146 +1064 AYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTN---NTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDL +1163
N K EF+A Y L DK A +IQSL+F+LAY+ N K K ++ + E ++ N + I+ K +N + N+L
CONCH_1474 +1445729 DRLNYFNMNENQKVEFVAKYFLGGDKTQ--------ALEVIQSLNFILAYENNGLSTASKDKFKENGFIAKEEILKQTSNTAKNINDK----INQLDNEL +1446026

UP..9_1146 +1164 NEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFANAI +1263
S LK L+ KQ +L+ +KAYN YV LIN+G+ + D F TLKN ++ L+ +SQILA I NQ L+ WQ+ ++ F + GAFAN I
CONCH_1474 +1446029 KSLVISSDKYLKDLIVKQNKLNEIIKAYNNYVALINKGLANESDPEFITLKNQIDVLMKDSQILADLINENQKELSIWQN---NNNTENFKVVGAFANVI +1446326

UP..9_1146 +1264 L-INPKLNEITNDSGNENDEYQKISRQIANLQ-KQTPIF-------eyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1345
L NPKL++IT + G D K +L+ +QT F EE+E +EVEE +M QK +TCIVSDN++TMNPC V
CONCH_1474 +1446329 LNTNPKLDQITEEGGGGEDP-NKPELPDNDLEFEQTASFNLIGDETVEEEKEEKEVEETAMMQKNRTCIVSDNFKTMNPCAV +1446572

UPTC3659_1146 vs: UPTC3659_1741 in NCTC 11845 (Campylobacter lari NCTC 11845, complete genome.)
Gene length: 2970bp / 990aa PV: No
Function: hemagglutinin domain-containing protein

Score: 828.00 bits: 360.99 e-value: 0.000000
length: 612 gaps: 83 id: 266 positives: 335 coverage: 0.57 query coverage 0.44

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfa-----lPSGGKFTHGTSGSIS-------INGKEMNIAGNKQ--NSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLN +119
KKL+ +I+LS + S+LFS A LPSGGKFTHGTSGSIS ++I G Q N +IQWGGGF I +VNFG K + QNYLN
UP..9_1741 +1750176 MKKLANHIILSGVTVSMLFSPLMAIDPNKLPSGGKFTHGTSGSISGPYFDKNTGKNTIDITGKTQGGNHVIQWGGGFSIGKDAQVNFG--KGQSGQNYLN +1750473

UP..9_1146 +120 IAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKV +219
IAHGT KSTI G+L AG NNVFLINPNGVIITKTGTINANRFVAST+S+ +F G SFSP+FKP K GNVVNMGNINA +V L GNKV
UP..9_1741 +1750476 IAHGTNKSTIEGVLNAGGNNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMWKFANMKNFNDGLSFSPIFKPH-KAGNVVNMGNINANDVLLIGNKV +1750773

UP..9_1146 +220 MLSADTSWDKKNNKIKLNQI------TADSIDLKGNEVYVDISTINSKNLTTDAKKGIAYLSATGYYYN----------PTRKYNDIIFTTKG----VMD +319
+ K N + + TA+ + L GNEV + + I S + A + +T YYN T++Y++I T G V
UP..9_1741 +1750776 DIQGGNIHGKHNEGVGDEALKNPSGNTANKVHLVGNEVNILVDGIKSDSIIASAYIKGSLQQSTTSYYNYGNNIGKLNFITQEYDNIDKTNLGNKKLVTK +1751073

UP..9_1146 +320 KTYNQYISIGSDLDWWHFAKGWNEKDDFRNNVVG--DTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNI +419
+ ++ +IGSD+DWWHFAKGWNE +NN+ G DT+KL +DIDF AS G+NYANY ID G T MIVG +SAF KTFDGQG+TL NI
UP..9_1741 +1751076 DKFEKHATIGSDIDWWHFAKGWNEN---KNNMRGFFDTYKLVDDIDFGASEGKNYANYCIDGLG--------CTSMIVGRTSDSAFKKTFDGQGYTLSNI +1751373

UP..9_1146 +420 NIDTTKLSDNNSKNYIGLFGKADGANFANINVDYKNGGINASND--------YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTF +519
NIDTT + ++G+FG A+GA F+NIN+DY NGGI D Y GGFIG + +++ NI I GGFAG+I G F
UP..9_1741 +1751376 NIDTTVGEIKDKPLHVGIFGLANGASFSNINIDYMNGGIRHKVDETDKDEDIYAGGFIGSASNSKFYNMSLKNISNIYVEGSGDYVLAGGFAGEIKNGDF +1751673

UP..9_1146 +520 CnisinkinkiynTGEES----FTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTS----- +619
N + + S F GGFAG + Y + I + N+ SIK +S +GGFAG + G + + +D++ AIS S
UP..9_1741 +1751676 INRILIQDIGDIFGNLNSIGSAFAGGFAGFVNGGMY-KNISMQNVKSIKVKSS----DEARAGGFAGSVNG----TFSDIYLDKLGAISASSEVSEWGST +1751973

UP..9_1146 +620 --GGFAGWIRGG +631
GGF G + G
UP..9_1741 +1751976 NIGGFFGSVTSG +1752009

Score: 168.00 bits: 76.29 e-value: 0.000000
length: 275 gaps: 62 id: 90 positives: 126 coverage: 0.57 query coverage 0.44

UP..9_1146 +534 WISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEF-NKISIKDITNIssnfsssa +633
++ GG + D DE I +GGF G K+ N+++ + I +E G +LAGGFAGEI G+F N+I I+DI +I
UP..9_1741 +1751433 YMNGGIRHKVDETDKDEDIY-------AGGFIGSASNSKFYNMSLKNISNIY------VEGSGDYVLAGGFAGEIKNGDFINRILIQDIGDI-------- +1751730

UP..9_1146 +634 saggfageasdgNFENISINDVKNISSVGS--AGGFAGRISGSKFENISINDVKNI----SSTTSAGGFAGYLGNSDFSFITLNNIENITANNK-SRRES +733
N+ S+GS AGGFAG + G ++NIS+ +VK I S AGGFAG + N FS I L+ + I+A + S S
UP..9_1741 +1751733 ---------------------FGNLNSIGSAFAGGFAGFVNGGMYKNISMQNVKSIKVKSSDEARAGGFAGSV-NGTFSDIYLDKLGAISASSEVSEWGS +1752030

UP..9_1146 +734 VYSGGFAGEIYNG-KFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNA +808
GGF G + G + I + + +E +T + AK+ G F G G IF NI IY KN +NNA
UP..9_1741 +1752033 TNIGGFFGSVTSGTSVDKIYIYFDEGVE--FTSQG-----AKENNIGKFVGSGSG-IFSNIHIYHHKN--DLNNA +1752255

Score: 435.00 bits: 191.46 e-value: 0.000000
length: 646 gaps: 114 id: 207 positives: 300 coverage: 0.57 query coverage 0.44

UP..9_1146 +663 AGGFAGRISGSKFENISINDVKNISSTTS-----AGGFAGYLGNSDF-SFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYT +762
AGGF G S SKF N+S+ ++ NI S AGGFAG + N DF I + +I +I N S S ++GGFAG + G + NIS+ ++ I+ +
UP..9_1741 +1751493 AGGFIGSASNSKFYNMSLKNISNIYVEGSGDYVLAGGFAGEIKNGDFINRILIQDIGDIFGNLNSIG-SAFAGGFAGFVNGGMYKNISMQNVKSIKVKSS +1751790

UP..9_1146 +763 PENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENY +862
E AGGFAG ++G F +I + + I A GS + GGF G + S + IY+YF S+ EN
UP..9_1741 +1751793 DE---------ARAGGFAGSVNGT-FSDIYLDKLGAISASSEVSEWGS---------TNIGGFFGSVT----SGTSVDKIYIYFDEGVEFTSQGA-KENN +1752090

UP..9_1146 +863 AGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGN---EIQLHPYDDNNQGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITS +962
GKF G S S IHIYHHK DL NATAD+ YWGN +IQ+H Y+DNNQ S +K
UP..9_1741 +1752093 IGKFVGSGSGI------FSNIHIYHHKNDLNNATADKSYWGNTDDKIQIHTYNDNNQ------------------------------ESTYK-------- +1752390

UP..9_1146 +963 PDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLKAYSKIDKDNPT-SKAEFLANYLLSKDKYPDDKERLD +1062
DF +K PN D+ +L+ DD+ ++ QII D+ K Y+V+I +L++LL+ Y K +++ K F+ Y KD+ +
UP..9_1741 +1752393 ----DFLSKANTIEKPNHSDV-----SLEEDDL--NKEVITQIIEDITQKGYVVDIAMLEKLLEDYNKFNENTTEGEKISFIQTYFNIKDE--------N +1752690

UP..9_1146 +1063 IAHSMIQSLDFLLAYQTNNT-GKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKA---YNAYVDL +1162
A ++QSLDFL Y N T K +++++AK L++ Q +SK + NKA+ ++ N+ N+ + K + + KA +N +DL
UP..9_1741 +1752693 EARGILQSLDFLTYYTNNKTFDKNRISNEAKSLFDFLQAQSKITLD----NNKALFSYLNNNKNKLIAEYNKYKKLEQIFKDKEQDYFKAEAEFNRLLDL +1752990

UP..9_1146 +1163 INRGVKSKYDSAF-KTLKNNLNSLISESQILATAISSNQTI---LTKWQDKASDDSNGQFTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANL +1262
+N+G S D F + N LN+ S S A N I TK ++ N F N + P++ I N G + ++++ + NL
UP..9_1741 +1752993 VNKGKVSYNDPKFTQAFDNWLNAYNSYSNTYVDAKNINDNIKSTYTKHINETLGYDNFNFNPFLLSLNPDIKEPEISNIDNSQGGDLPDFEQTTS--LNL +1753290

UP..9_1146 +1263 QKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1308
+ EEEETEEVEEAS+NQK K CIVSDN++TMNPC+VG
UP..9_1741 +1753293 IGDNAL--NEEEETEEVEEASLNQKNKACIVSDNFKTMNPCIVGGL +1753428

UPTC3659_1146 vs: UPTC3659_0800 in NCTC 11845 (Campylobacter lari NCTC 11845, complete genome.)
Gene length: 3243bp / 1081aa PV: No
Function: hemagglutinin domain-containing protein

Score: 1044.00 bits: 454.16 e-value: 0.000000
length: 733 gaps: 101 id: 333 positives: 410 coverage: 0.53 query coverage 0.44

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfa-----lPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNF-GNSKFEGQQNYLNIAHGTSKS +119
KKL+ +I+LS + S+LFS A LPSGGKFTHGTSG+I ING M+I GN +NS+IQWGGGF I N +VNF GN QNYLNIAHGT KS
UP..9_0800 +771451 MKKLANHIILSGVTVSMLFSPLMAIDPNKLPSGGKFTHGTSGTININGNNMDIMGNGKNSVIQWGGGFSIGNKAQVNFIGN-----DQNYLNIAHGTNKS +771748

UP..9_1146 +120 TIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNN +219
TI G+L AG NNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQGASFSPVF K GNVVNMGNINA NV L GNKV + K N
UP..9_0800 +771751 TIEGVLNAGGNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQGASFSPVFNSH-KAGNVVNMGNINANNVLLIGNKVSIDGGNIHGKHNE +772048

UP..9_1146 +220 KIKLNQI------TADSIDLKGNEVYVDISTINSKNLTTDAK-KGIAYLSATGYY-YNP--------TRKYNDIIFTTKG----VMDKTYNQYISIGSDL +319
+ + + TA+ + L GNEV + + I S + A KG S T YY Y+ ++Y++I T G V + ++ +IGSD+
UP..9_0800 +772051 GVGDDALKNPSGNTANKVHLVGNEVNILVDGIKSDSIIASAYVKGSLQQSTTSYYNYDNNIGKLNFIAQEYDNIDKTNLGNKKLVTKDKFEKHATIGSDV +772348

UP..9_1146 +320 DWWHFAKGWNE-KDDFRNNVVGDTFKLTNDIDFKA------SSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLS +419
DWWHFAKGWNE K++ R V DT+KL +DIDF A SGQNYANYW+DLN +G KQ NEFTNMIVG+ +F K FDGQGFTLKNINIDTT+L
UP..9_0800 +772351 DWWHFAKGWNENKNNMR--VFFDTYKLVDDIDFGANCKNGVCSGQNYANYWVDLNCNGVKQDNEFTNMIVGY--GGSFTKNFDGQGFTLKNINIDTTQL- +772648

UP..9_1146 +420 DNNSKNYIGLFGKADGANFANINVDYKNGGINASNDY-VGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiynTG +519
DN S N +G+FG ANF NINVDY GG+ A N + VGGF+GLI + S N SVGGF G+
UP..9_0800 +772651 DNKSGN-VGIFGSTINANFKNINVDYMGGGVKADNAFNVGGFVGLIQGRVSLSNISLNNISDISVNFGLGVSVGGFVGR--------------------- +772948

UP..9_1146 +520 EESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIIN------LPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVM +619
D YF+ I ++ I+SI S I GGF G G Y I++ D+D+I S GGF G GG Y I++
UP..9_0800 +772951 ------------SVDGYFKNISLDKINSIYNNSGIYHGEDGTLFIVGGIGGFVGSNNDGSYSHISINDIDKINGGSESWSEIGGFVGEDEGGSYSHISIN +773248

UP..9_1146 +620 GVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSVGSAGGFAGRISGSKFENIS +719
+D+I + F G G F IS+ +I ++ F + G + + S F NIS+N++ NIS +GGF G SG F NIS
UP..9_0800 +773251 DIDKISGGGNNNDVGG--------FVGRSVDGSFKNISLGEIIELTKGFQALGGFVGQSVDGS---FSNISLNNIGNISNSIYSGGFIGWGSGY-FNNIS +773548

UP..9_1146 +720 INDVKNISSTTSAGGFAGYLGNSDFSFITLNNI +752
+N++ NIS S +G++G F + NNI
UP..9_0800 +773551 LNNIGNISGKAS----SGFIGKIYFGRVNANNI +773647

Score: 437.00 bits: 192.32 e-value: 0.000000
length: 766 gaps: 150 id: 237 positives: 328 coverage: 0.53 query coverage 0.44

UP..9_1146 +562 GGFAGWIRGG-KYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnf----------sssasaggfageasdgNFENIS +661
GGF G I+G NI++ + +I ++G + GGF G G F IS+ I I N GGF G DG + IS
UP..9_0800 +772732 GGFVGLIQGRVSLSNISLNNISDISV-------NFGLGVSVGGFVGRSVDGYFKNISLDKINSIYNNSGIYHGEDGTLFIVGGIGGFVGSNNDGSYSHIS +773029

UP..9_1146 +662 INDVKNIS----SVGSAGGFAGRISGSKFENISINDVKNISSTTSAGGFAGYLGNS-DFSF--ITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNI +761
IND+ I S GGF G G + ISIND+ IS G++G S D SF I+L I +T ++ GGF G+ +G F NI
UP..9_0800 +773032 INDIDKINGGSESWSEIGGFVGEDEGGSYSHISINDIDKISGGGNNNDVGGFVGRSVDGSFKNISLGEIIELTKGFQAL------GGFVGQSVDGSFSNI +773329

UP..9_1146 +762 SLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPN +861
SLN I NI S +Y+GGF G G F NIS+ ++ NI SG + GF G I + + NNIY+YF P
UP..9_0800 +773332 SLNNIGNISNS-------------IYSGGFIGWGSGY-FNNISLNNIGNI------------------SGKASSGFIGKIYF---GRVNANNIYIYFRPS +773629

UP..9_1146 +862 SIIKSESKLNENYAGKF--AGRISVSNNANPDISKIHIYHHKKDLTNATADQKYW---------GNEIQLHPYDDNNQ--GYIDFKTAALAALNGLKEID +961
++IKS+ + GKF AG I+ SN IHIYHH+KDLTNATADQ YW ++I +H Y+DN Q Y DF + A
UP..9_0800 +773632 AVIKSDEFQHGKFIGKFDYAGDITFSN--------IHIYHHEKDLTNATADQAYWNDFNKNGYVSDKINIHTYNDNTQESAYKDFLSKA----------- +773929

UP..9_1146 +962 CGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLKAYSKIDKDNPTSK +1061
I P +K P PN D+I L +DD+ S + + E II ++++K Y + I L L+ A+ +DKD +
UP..9_0800 +773932 ------------------NTIEKP------SKPTDPTDPNDSDVI-----LGSDDLYS-DVIMEWIIKEIREKNYTISIEKLASLINAFKTLDKDSSEDE +774229

UP..9_1146 +1062 AEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEKTkdskdllkqlla +1161
+ + L DD E L SM QS+ FLL YQ N +L +A Y N I + ++ K++L ++ + +
UP..9_0800 +774232 IKTIVKAHLG---IKDDNEAL----SMAQSISFLLNYQEHNF-DGRLNKEALDAYNTTIKPNVNNTLGI----ISYLDKNKDELQKQYDEYLQIKNNFDK +774529

UP..9_1146 +1162 kqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISS-NQTIL-----TKWQDKASDDSNGQFTIKGAFANAILINPKLNEIT +1261
++ + +N +DL+N+G S D F +N E L+ I+ N +L +DK +N F LI P+ +I
UP..9_0800 +774532 AHQAYKNSEAEFNRLLDLVNKGKVSYNDPRFTQAFDNWLNAYNEYNALSNDITKLNDNVLNIASGITDKDKGLGYTNFSFVKFDDITKIDLIKPEFPDID +774829

UP..9_1146 +1262 NDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1327
N G +++ Q A L EEEETEEVEEAS+NQK K CIVSDN +TMNPC+VG
UP..9_0800 +774832 NSQGGNLPDFE----QTASLNLIGDKALDEEEETEEVEEASLNQKNKACIVSDNSKTMNPCIVGGL +775027

UPTC3659_1146 vs: UPTC3659_0779 in NCTC 11845 (Campylobacter lari NCTC 11845, complete genome.)
Gene length: 3408bp / 1136aa PV: No
Function: hemagglutinin domain-containing protein

Score: 1051.00 bits: 457.18 e-value: 0.000000
length: 756 gaps: 110 id: 342 positives: 423 coverage: 0.52 query coverage 0.45

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfa-----lPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNF-GNSKFEGQQNYLNIAHGTSKS +119
KKL+ +I+LS + S+LFS A LPSGGKFTHGTSGSI ING M+I GN +NS+IQWGGGF I N +VNF GN QNYLNIAHGT KS
UP..9_0779 +747054 MKKLANHIILSGVTVSMLFSPLMAIDPNKLPSGGKFTHGTSGSININGNNMDIMGNGKNSVIQWGGGFSIGNKAQVNFIGN-----DQNYLNIAHGTNKS +747351

UP..9_1146 +120 TIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEF----KAQGASFSPVFKPNPKGGNVVNM-GNINAKNVTLQGNKVMLSADTSW +219
TI G+L AG NNVFLINPNGVIITKTGTINANRFVAST+S+ +F + QGA+FSPVFKPNPKGGNV+NM G INA V LQGNKV+ A T +
UP..9_0779 +747354 TIEGVLNAGGNNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMWKFAKSTQVQGAAFSPVFKPNPKGGNVINMGGEINAASVVLQGNKVVSNAYTDY +747651

UP..9_1146 +220 DKKNNKIKLNQITADSIDLKGNEVYVDISTINSKNLTT--------DAKKGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAK +319
D KN QI+A+ I L+GNEVYVD+S+IN L + KG YL A+GYYYNP +T K Y +Y+ IGSD+DWWHFAK
UP..9_0779 +747654 D-KNLGEHSKQISANEITLQGNEVYVDVSSINGNKLGKLNIKGSNGNNFKGSMYLNASGYYYNPNSFKVFDKYTNTNNNFKVY-KYVGIGSDVDWWHFAK +747951

UP..9_1146 +320 GWNE-KDDFRNNVVGDTFKLTNDIDFKASSGQNYANYWI-DLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFG +419
GWNE KD F+ N ++LTNDIDFKASSG+NYANY I DL TNMIVG AF KTFDGQG+TL NINID ++ + +GLFG
UP..9_0779 +747954 GWNENKDGFKANA--SEYRLTNDIDFKASSGKNYANYCIGDLG---------CTNMIVG--TTGAFTKTFDGQGYTLSNINIDIN--VNDRIQQDVGLFG +748251

UP..9_1146 +420 KADGANFANINVDYKNGGINA---------SNDYVGGFIGLIDKGIYSSITinnikeinnnkkL----RTASVGGFAG----------QINGGTFCnisi +519
+ + A NI+VDY GGINA S+ VGGFIG I I++ NI EI T VGGF G +++G I
UP..9_0779 +748254 RVNEATIKNIDVDYMGGGINAQYTTSGYYNSDINVGGFIGSIQNSSVENISLKNISEITATSIFTSKKPTINVGGFIGSAEKAKFYNIRLDGNKMMKILN +748551

UP..9_1146 +520 nkinkiynTGEESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNN +619
T + GGF + F+ I + NI+SIKSES I + +GGF G + I + ++ +I +SGGF G G K N
UP..9_0779 +748554 KIETDNTGT-PNGYVGGFIASADEGTEFKNIYVENIESIKSESKGI----LDAGGFIGNAYDVLFESIHIANIGDI-----NGRSSGGFIGSAAGVKTEN +748851

UP..9_1146 +620 IAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNI-----SSVGSAGGFAGRI +719
I + + +I G AGGFAGE+S GE+NKISIK I I S S + + S +N+ I ++ NI ++ AGGF G+I
UP..9_0779 +748854 IKIEKIGKI-----------SGSYSAGGFAGELSGGEYNKISIKGIKTIESPSSGGFAGIKDSDHDSII-VKNVHIQNIDNINAKMNTTGAYAGGFIGQI +749151

UP..9_1146 +720 SG-------SKFENISINDVKNI-----SSTTSAGGFAGYL-----GNSDFSFITL +775
+ FENI+I+ +KNI S T AGG GY+ N +FS + L
UP..9_0779 +749154 TSVSGKNDTGTFENITIDGIKNIYVEGNSNFTYAGGLIGYVYTNFNANYNFSNVNL +749319

Score: 531.00 bits: 232.87 e-value: 0.000000
length: 799 gaps: 111 id: 245 positives: 369 coverage: 0.52 query coverage 0.45

UP..9_1146 +526 VSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTS-----GGFAGWIRGGKYNNIAVMGVDEI-IAHRFDSLEDYGGKLLAGGFAGEISRG-EFNKISI +625
+ GGF G I NI++ ++ EI A S GGF G K+ NI + G + I + ++ GGF G EF I +
UP..9_0779 +748284 INVGGFIGSIQNSSVENISLKNISEITATSIFTSKKPTINVGGFIGSAEKAKFYNIRLDGNKMMKILNKIETDNTGTPNGYVGGFIASADEGTEFKNIYV +748581

UP..9_1146 +626 KDITNIssnfsssasaggfageasdgNFENISINDVKNISSVGSAGGFAGRISGSKFENISINDVKNISSTTSAGGFAGYLGNSDFSFITLNNIENITAN +725
++I I S AGGF G A D FE I I ++ +I S+GGF G +G K ENI I + IS + SAGGFAG L ++ I++ I+ I
UP..9_0779 +748584 ENIESIKSESKGILDAGGFIGNAYDVLFESIHIANIGDINGR-SSGGFIGSAAGVKTENIKIEKIGKISGSYSAGGFAGELSGGEYNKISIKGIKTI--- +748881

UP..9_1146 +726 NKSRRESVYSGGFAGEIYNGKFNNISLN--HIQNIESSYTPENEDEWFAKQVYAGGFAGRI-------DGRIFENISIYDVKNIHAINNAQYHGSDIENG +825
ES SGGFAG I + + I + HIQNI+ N YAGGF G+I D FENI+I +KNI+ N+ +
UP..9_0779 +748884 -----ESPSSGGFAG-IKDSDHDSIIVKNVHIQNIDNINAKMN-----TTGAYAGGFIGQITSVSGKNDTGTFENITIDGIKNIYVEGNSNF-------- +749181

UP..9_1146 +826 GNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGNEIQLHPYDDNN +925
++AGG GY+ + + F N+ ++F +S ++ K GK G+ S S N + S +++ D + + Y G +Q + +
UP..9_0779 +749184 ----TYAGGLIGYVYTNFNANYNFSNVNLFF--DSSMRVTGK--NHGVGKIIGK-STSTKLNFNNSN---FYYIVDNFAGSRSENYSGLALQQYVKINEQ +749481

UP..9_1146 +926 QGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPL-IPNIEDIINEQATLDTDDIISKNDLEEQ-----IIADLKDK +1025
+ Y +FKT T P++ + + Q L +P++E I E A L+ +D K+DL E+ II D+ +K
UP..9_0779 +749484 EKYNEFKTK------------------------------DQTTKPNVGTYESNQKVSLELPDVEKIKSEIAILEKND--QKDDLFEETIKKEIIEDITEK +749781

UP..9_1146 +1026 FYIVNINILDELLKAYSKIDKDN-PTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTN---NTGKSKLTDDAKVLYEANQNRSKNKYEEI +1125
+Y V+I L+EL+KAY K++ + + +F+ N+LL + KE +++SLDFLLAY+TN N K + D + AN+ N + +
UP..9_0779 +749784 YYFVDIKTLEELIKAYDKLNSNSTKEERIDFIKNHLLVSKSEQEAKE-------VVESLDFLLAYKTNGLENAEKNGILKD-EATKSANKRIQDNVKKTL +750081

UP..9_1146 +1126 DGKNKAVMNFIKND---LNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKA +1225
+ +++F+KN+ L + +LL+ L Q L A+ YNAYVDLIN + D+ + L+ ++ L ES+ L I Q IL++WQDK+
UP..9_0779 +750084 SYEQNLIVDFLKNEENGLKWLVGSTNNLLEDLKDTQAALKEAILKYNAYVDLINANKAERDDAKLEALREKIDQLTVESEKLGKQIDEKQIILSQWQDKS +750381

UP..9_1146 +1226 SDDSNGQFTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQ-KQTPIFeyeeeeteeveeASM------NQKGKTCIVSDNYRTMNPCVVG +1324
DSN +F I G F LI P LNE + G + D I +L+ +QT ++ E EE Q+ TCIVSDN++TMNPC VG
UP..9_0779 +750384 KKDSNEHFVILGKFDYGQLIKPDLNEPNGEGGKDPDIKPDIPSAPDDLEFEQTASLNLIGDKAIEEEEEKEIGETDGEQRLITCIVSDNFKTMNPCAVG +750678

UPTC3659_1146 vs: UPTC3659_1381 in NCTC 11845 (Campylobacter lari NCTC 11845, complete genome.)
Gene length: 3009bp / 1003aa PV: No
Function: hemagglutinin domain-containing protein

Score: 1034.00 bits: 449.85 e-value: 0.000000
length: 620 gaps: 88 id: 291 positives: 362 coverage: 0.58 query coverage 0.45

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfa-----lPSGGKFTHGTSGSIS-------INGKEMNIAGNKQ--NSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLN +119
KKL+ +I+LS + S+LFS A LPSGGKFTHGTSGSIS ++I G Q N +IQWGGGF I +VNFG K + QNYLN
UP..9_1381 +1383437 MKKLANHIILSGVTVSMLFSPLMAIDPNKLPSGGKFTHGTSGSISGPYFDKNTGKNTIDITGKTQGGNHVIQWGGGFSIGKDAQVNFG--KGQSGQNYLN +1383734

UP..9_1146 +120 IAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTI-NANRFVASTTSLQAQHFEEFK----AQGASFSPVFKPNPKGGNVVNMGNINAKN-VTLQGNK +219
IAHG SKSTI G+L AG NNVFLINPNGVII K+G+I NA F+AST +L F FK +FSP KPN GNVVN+G INA N +TLQGNK
UP..9_1381 +1383137 IAHGASKSTIEGVLNAGGNNVFLINPNGVIIEKSGSIINAKNFMASTATLSDDDFNTFKNLSFENPQAFSPKIKPNS--GNVVNLGKINATNSITLQGNK +1383434

UP..9_1146 +220 VMLSADTSWDKKNNKIKLNQITADSIDLKGNEVYVDISTINSKNLTTDAKKGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFA +319
++L AD DK LN+I A+ ++LKGNEVY D+ T + + +A G YLSATGYYY+P RKY++ +DKTYNQYISIGSDLDWWHFA
UP..9_1381 +1382837 IVLEAD--FDKGS----LNKIEANELNLKGNEVYADVGTTKVEKVNIEANNGTLYLSATGYYYDPKRKYDEF---NNVKLDKTYNQYISIGSDLDWWHFA +1383134

UP..9_1146 +320 KGWNEKDDFRNNVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFGK +419
KGWNEKDDFRNNVVGDTFKLTNDIDF AS G+NYANY ID G T MIVG +SAF KTFDGQG+TL NINIDTT + ++G+FG
UP..9_1381 +1382537 KGWNEKDDFRNNVVGDTFKLTNDIDFGASEGKNYANYCIDGLG--------CTSMIVGRTSDSAFKKTFDGQGYTLSNINIDTTVGEIKDKPLHVGIFGL +1382834

UP..9_1146 +420 ADGANFANINVDYKNGGINASND--------YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiynTGEESFTG +519
A+GA F+NIN+DY NGGI D Y GGFIG + +++ NI I GGFAG+I G
UP..9_1381 +1382237 ANGASFSNINIDYMNGGIRHKVDETDKDEDIYAGGFIGSASNSKFYNMSLKNISNIYVEGSGDYVLAGGFAGEIKNGD---------------------- +1382534

UP..9_1146 +520 GFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDS +619
F++I+I +I I + I + +GGFAG + GG Y NI++ +V I S+ +GGFAG + G + +I + + I A
UP..9_1381 +1381937 -----------FDRILIQDIGDIFGNLNSIGIAY--AGGFAGFVNGGMYKNISMQNVKSIKVKSSDEARAGGFAGSVN-GTFSDIYLDKLGAISASS--E +1382234

UP..9_1146 +620 LEDYGGKLLAGGFAGEISRG +639
+ ++G + GGF G ++ G
UP..9_1381 +1381637 VSEWGSTNI-GGFFGSVTSG +1381694

Score: 160.00 bits: 72.83 e-value: 0.000000
length: 281 gaps: 65 id: 87 positives: 126 coverage: 0.58 query coverage 0.45

UP..9_1146 +534 WISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssas +633
++ GG + D DE I +GGF G K+ N+++ + I +E G +LAGGFAGEI G+F++I I+DI +I
UP..9_1381 +1382264 YMNGGIRHKVDETDKDEDI-------YAGGFIGSASNSKFYNMSLKNISNIY------VEGSGDYVLAGGFAGEIKNGDFDRILIQDIGDI--------- +1382561

UP..9_1146 +634 aggfageasdgNFENISINDVKNISSVGSAGGFAGRISGSKFENISINDVKNI----SSTTSAGGFAGYLGNSDFSFITLNNIENITANNK-SRRESVYS +733
F N+ N + AGGFAG + G ++NIS+ +VK I S AGGFAG + N FS I L+ + I+A + S S
UP..9_1381 +1381964 ------------FGNL------NSIGIAYAGGFAGFVNGGMYKNISMQNVKSIKVKSSDEARAGGFAGSV-NGTFSDIYLDKLGAISASSEVSEWGSTNI +1382261

UP..9_1146 +734 GGFAGEIYNG-KFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRI---------DGRIFENISIYDVKNIHAINNA +814
GGF G + G + I + + +E +T + AK+ G F GR+ IF NI IY +N +NNA
UP..9_1381 +1381664 GGFFGSVTSGTSVDKIYIYFDEGVE--FTSQG-----AKENNIGKFVGRVIGSGIGSGIGSGIFSNIHIYHHEN--DLNNA +1381904

Score: 491.00 bits: 215.62 e-value: 0.000000
length: 661 gaps: 103 id: 208 positives: 316 coverage: 0.58 query coverage 0.45

UP..9_1146 +663 AGGFAGRISGSKFENISINDVKNISSTTS-----AGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTP +762
AGGF G S SKF N+S+ ++ NI S AGGFAG + N DF I + +I +I N S + Y+GGFAG + G + NIS+ ++ I+ +
UP..9_1381 +1382204 AGGFIGSASNSKFYNMSLKNISNIYVEGSGDYVLAGGFAGEIKNGDFDRILIQDIGDIFGNLNSIGIA-YAGGFAGFVNGGMYKNISMQNVKSIKVKSSD +1382501

UP..9_1146 +763 ENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYA +862
E AGGFAG ++G F +I + + I A GS + GGF G + S + IY+YF S+ EN
UP..9_1381 +1381904 E---------ARAGGFAGSVNGT-FSDIYLDKLGAISASSEVSEWGS---------TNIGGFFGSVT----SGTSVDKIYIYFDEGVEFTSQGA-KENNI +1382201

UP..9_1146 +863 GKFAGRISVSNNANPD----ISKIHIYHHKKDLTNATADQKYWGN---EIQLHPYDDNN--QGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDN +962
GKF GR+ S S IHIYHH+ DL NATAD+ YWGN +IQ+H Y++NN + Y DF+ +N +K+
UP..9_1381 +1381604 GKFVGRVIGSGIGSGIGSGIFSNIHIYHHENDLNNATADKSYWGNTYDKIQIHTYNNNNKDETYKDFEN----KINSIKD-----------------PSS +1381901

UP..9_1146 +963 PNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIAD----LKDKFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKY +1062
P IT P D+ + Q +QATL D DL E I+ D L + Y +++N L L+AY K+ + SK +FLAN+LL K KY
UP..9_1381 +1381304 PSITKPTEKDYLSAQEAK---------EQQATLTQD------DLYESIVKDIFNSLNEHSYAIDLNTLQAFLEAYDKL--SDTKSKEDFLANFLLDKSKY +1381601

UP..9_1146 +1063 PDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNA +1162
+KER ++A S++QS+DF+L Y N+ SK + +E ++ + K+ + + KA+ +++ +N K+ + E+ YN+
UP..9_1381 +1381004 S-EKERENLARSLVQSMDFILVYSKNDAKDSKFESGVEATFENLKDEAGKKHSDAKEQGKALRAYVESLINP-VNSIKNNNGNIAGNNTEIKGLQDEYNS +1381301

UP..9_1146 +1163 YVDLINRGV--KSKYDSAFKTLKN---NLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFA-----NAILINPKLNEITNDSGNENDEY +1262
V+ IN+G+ + + A K L N+ L+ E + L T +N +L + + D+ + + + + A+++NP N ++ G+ +
UP..9_1381 +1380704 LVNSINKGLLDENELLIAQKRLGEIVANIEDLLGENKELKT---TNDILLAQIESSHKDNFR-TYGVSSSISETPTLSAVILNPGTNNGNDNNGDTSNG- +1381001

UP..9_1146 +1263 QKISRQIANLQKQTP-----IFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1323
S+ ++ LQKQ EEEE EV+E S+ QKGK CIVSDN +TMNPC+VG
UP..9_1381 +1380404 SDASQVVSSLQKQNSDKLGNAAVVEEEEKNEVDETSLMQKGKICIVSDNSKTMNPCIVGGL +1380584

UPTC3659_1146 vs: Cla_1530 in RM2100; ATCC BAA-1060D (Campylobacter lari RM2100, complete genome.)
Gene length: 3258bp / 1086aa PV: No
Function: conserved hypothetical protein, hemagglutination domain protein

Score: 1310.00 bits: 568.90 e-value: 0.000000
length: 644 gaps: 74 id: 364 positives: 414 coverage: 0.57 query coverage 0.48

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGIL +119
KKL+ +I+LS + S+LFS ALPSGGKFTHGTSG+I+ NG MNI+GN NS+IQWGGGFNIANGEKVNFG +NYLNIAHGTSKSTIAGIL
Cla_1530 +1481415 MKKLANHIILSGVTVSMLFSPLMALPSGGKFTHGTSGTITTNGNNMNISGNGINSVIQWGGGFNIANGEKVNFGGK----DKNYLNIAHGTSKSTIAGIL +1481712

UP..9_1146 +120 EAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQ---AQHFEEFKA--QGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNK +219
AG NNVFLINPNGVIITKTGTINANRFVAST+S+ + F K+ G SFSPVFKPN K GNVVNMGNINAKN+TLQGNKVMLSADTSWD KNNK
Cla_1530 +1481715 NAGGNNVFLINPNGVIITKTGTINANRFVASTSSMSDGDMKAFANLKSFEDGLSFSPVFKPN-KAGNVVNMGNINAKNITLQGNKVMLSADTSWDDKNNK +1482012

UP..9_1146 +220 IKLNQITADSIDLKGNEVYVDISTINSKNLTTDAK-KGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAKGWNEKDDFRNNVV +319
IK NQITAD IDLKGNE+YVDISTINSKNLTT+AK KGIAYLSATGYYYNPTRKYN+ + KTYNQYISIGSD+DWWHFAKGWNE +DFRNNV
Cla_1530 +1482015 IKFNQITADNIDLKGNEIYVDISTINSKNLTTEAKNKGIAYLSATGYYYNPTRKYNEFK-NINNKIKKTYNQYISIGSDVDWWHFAKGWNENEDFRNNVA +1482312

UP..9_1146 +320 GDTFKLTNDIDFKA------SSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFGKAD-GANFA +419
DTFKLTNDIDF A SGQNYANYW+DLNGDGKK ANE+TNM+VG F KTFDGQGFTLKNINID T +G+F A GANF
Cla_1530 +1482315 EDTFKLTNDIDFGANCKNGVCSGQNYANYWVDLNGDGKKDANEYTNMMVG--SGEFFTKTFDGQGFTLKNINIDITNWGS------VGIFASASSGANFK +1482612

UP..9_1146 +420 NINVDYKNGGINAS-NDYVGGFI-----------------------------------GLIDKGIYSSITinnikeinnnkkLRTA--SVGGFAGQINGG +519
NINVDY GGINA +VGGFI G +S I++N I I N + A S+GGF G+
Cla_1530 +1482615 NINVDYMGGGINAKGTRWVGGFIGTSYMRFGPSFSNISLNKIGSINSGGSVGPVGGFAGSAYNNTFSNISLNEIGNISGNSNFKYAFSSIGGFVGESMDS +1482912

UP..9_1146 +520 TFCnisinkinkiynTGEES--FTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAIS-THHGTSGGFA +619
TF NIS+NKI I E + GGF G+ + F III I+ I S I N + S G G + GGK+ I + ++ I + S + +GGF
Cla_1530 +1482915 TFSNISLNKIGNISGNSETNTIYVGGFVGYANEKNNFSDIIIKKIENISS---ISNNCSHSGGFAGGGLMGGKFERIFLENIANINSTSKSKSAYAGGFI +1483212

UP..9_1146 +620 G---WIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAG +663
G YN + V+ I + AGGFAG
Cla_1530 +1483215 GNNISYYTTYYNEKFIFDVNNISLKGVSNITSKAENAYAGGFAG +1483344

Score: 563.00 bits: 246.68 e-value: 0.000000
length: 699 gaps: 122 id: 252 positives: 328 coverage: 0.57 query coverage 0.48

UP..9_1146 +646 FENISINDVKNIS-------SVGSAGGFAGRISGSKFENISINDVKNIS-----STTSAGGFAGYLG-NSDFSFITLNNIENITA--NNKSRRESVYSGG +745
F NIS+N++ NIS + S GGF G S F NIS+N + NIS T GGF GY +FS I + IENI++ NN S GG
Cla_1530 +1482768 FSNISLNEIGNISGNSNFKYAFSSIGGFVGESMDSTFSNISLNKIGNISGNSETNTIYVGGFVGYANEKNNFSDIIIKKIENISSISNNCSHSGGFAGGG +1483065

UP..9_1146 +746 FAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYI------- +845
G KF I L I NI S+ +K YAGGF G I + Y+ K I +NN G ++AGGFAG+
Cla_1530 +1483068 LMGG----KFERIFLENIANINSTSK--------SKSAYAGGFIGN---NISYYTTYYNEKFIFDVNNISLKGVSNITSKAENAYAGGFAGFFIEKRKVE +1483365

UP..9_1146 +846 NYDKHS-----KPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWG-----------NEIQLHPYDD +945
+YD K NIYMYF ++ I + N N+ GKF G + D IHIY+ K LTNATAD KY N+I + Y D
Cla_1530 +1483368 DYDGSKNGYSYKINLKNIYMYFDEDAKITANNNKN-NFTGKFYGGMEDIKEIAFD--NIHIYYKKDTLTNATADDKYLNKQDFNKNANNVNKINAYAYSD +1483665

UP..9_1146 +946 NN--QGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFY +1045
N Q Y +F +N + I K + P IP Q IPN EDIIN+ A LD +D++ K ++ +IIAD+ + Y
Cla_1530 +1483668 SNKEQAYENF-------INHVNTI-----SKPIF--------------PIIPPSKPSQNTDYIPNAEDIINKTAVLDENDLL-KEMIKNEIIADITNGKY +1483965

UP..9_1146 +1046 IVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEAN--------QNRSKNKYE +1145
+ I L ++L+ + K EF+A Y LS DK A ++QSLDFLLAY+ N G S ++D +E N + N E
Cla_1530 +1483968 KLHISDLLKMLEDKTNYSNMSENQKIEFIAKYFLSGDKTK--------ALEVVQSLDFLLAYE--NNGLSTASEDK---FEGNGFGVKNEILSQVNNTTE +1484265

UP..9_1146 +1146 EIDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKAS +1245
I GK N +K +L S LK L+ KQ ELD A+KAYN YVDLIN+G S D F LK+ +N+L+ ESQ+LA +I NQ L WQ+
Cla_1530 +1484268 NIKGK----FNQLK-ELEPLVNSSNKYLKDLITKQNELDNAIKAYNTYVDLINKGFASADDREFIILKDQINTLMKESQVLADSINENQGKLIDWQN--- +1484565

UP..9_1146 +1246 DDSNGQFTIKGAFANAIL-INPKLNEITNDSGN-------ENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVG +1344
++ F + GAFAN IL NPKL++IT G+ E E Q A L + E +E+EE S+ QK KTCIVSDNY+TMNPCVVG
Cla_1530 +1484568 NNNTENFKVVGAFANVILNTNPKLDQITGKGGDIDNPNKPELPETDMEFEQTASLNLIGDNAIEDNEGKKEIEETSLAQKNKTCIVSDNYKTMNPCVVG +1484862

UPTC3659_1146 vs: UPTC16712_1171 in RM16712 (Campylobacter lari RM16712, complete genome.)
Gene length: 3987bp / 1329aa PV: No
Function: hemagglutinin domain-containing protein

Score: 2366.00 bits: 1024.43 e-value: 0.000000
length: 1390 gaps: 187 id: 706 positives: 862 coverage: 0.53 query coverage 0.55

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSIS-INGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGI +119
KKL+ +I+LS + S+LFS ALPSGGKFTHGTSGSI N K MNI GN +NS+IQWGGGF I GEKVNFG + +NYLNIAHGT KSTI G+
UP..2_1171 +1158197 MKKLANHIILSGVTVSMLFSPLMALPSGGKFTHGTSGSINKPNDKTMNIIGNGKNSVIQWGGGFSIGQGEKVNFGGT----DKNYLNIAHGTDKSTIEGL +1158494

UP..9_1146 +120 LEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQG----------ASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSW +219
L AG NNVFLINPNGVIITKTGTINANRFVAST+S+ ++ +EF A G +FSPVFKP K GNVVNMGNINA +VTLQG+KV+L A+T +
UP..2_1171 +1157897 LNAGGNNVFLINPNGVIITKTGTINANRFVASTSSMDSKSMQEF-ADGKYTNGKVIDYTTFSPVFKP-SKAGNVVNMGNINANDVTLQGDKVVLNANTDY +1158194

UP..9_1146 +220 DKK-NNKIKLNQITADSIDLKGNEVYVDISTINS---KNLTTDAK-KGIAYLSATGYYYNPT--RKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAKG +319
DK NKI + I ++ I L+G EVYVDI I+ KN+ DAK KG+ YL A GYYYNP+ + + I K + N+YI IGSD+DWW+FAKG
UP..2_1171 +1157597 DKTAGNKIGI--IKSNNIRLEGKEVYVDIGNIDGNSIKNINIDAKNKGLVYLNARGYYYNPSSFKVFSKITANNK----VSKNEYIGIGSDVDWWYFAKG +1157894

UP..9_1146 +320 WNE-KDDFRNNVVGDTFKLTNDIDFKA------SSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNY- +419
WNE K+ FR+ ++LTNDIDF A SGQNYA YWIDLNG+GKK+ANEFTNMIVG+KD AF K+ DGQG TLKNI IDTTK+++N KNY
UP..2_1171 +1157297 WNENKEGFRD--TASEYRLTNDIDFGANCKNGKCSGQNYASYWIDLNGNGKKEANEFTNMIVGYKD--AFTKSLDGQGNTLKNIFIDTTKIANN--KNYG +1157594

UP..9_1146 +420 IGLFGKADGANFANINVDYKNGGINASNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASV---------GGFAGQING----------GTFCnis +519
+G+FG +GA F NIN+DY GGINA N VGGF G D G I++ + I N +L + GGFAG NG F
UP..2_1171 +1156997 VGIFGTTNGASFTNINIDYMGGGINAQNINVGGFAGYFD-GFAENISLKKLHNIKNKVELDRGVIFESYDFYGTGGFAGNANGIFRNISLEDVKNFDVRI +1157294

UP..9_1146 +520 inkinkiynTGEESFTGGFAGW---IKQDPYFEQI----IINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTS------ +619
N GGFAG + + Y + I IINN SD NL GGFAG+I+ G YNNI + + +++ + +
UP..2_1171 +1156697 QNITKNNLGGYVIYGVGGFAGISFGMLDNIYLKDIGKFKIINNNSDNYLYSDSTNL-----GGFAGYIANGIYNNIKLEKIYDLLYVDDFYNNVDRGSYI +1156994

UP..9_1146 +620 ----GGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGG-----KLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggf----ageasdgNFEN +719
GGFAG+I G NI + + I ++ Y KL GGFAG+IS G ++KI + +I NI+ + S AG GNF N
UP..2_1171 +1156397 NTHLGGFAGYIANGNLENIILNDIKNINLKYTSYVDRYNRDLPMLKLYLGGFAGKISNGTYDKIYLYNINNITFDALNSVPVAAHLGGFAGNIETGNFNN +1156694

UP..9_1146 +720 ISINDVKNISS----------------VGSAGGFAGRISG--------SKFENISINDVKNISSTT-----------SAGGFAGYLGNSDFSFITLNNIE +819
I++++++NI + V GGFAG I G F+NI +N++ NIS+ S GGFAG + S F I LNNI
UP..2_1171 +1156097 ITLDNIQNIKANLDVIKYCLNCGLSIGVLNVGGFAGSIGGDFINVFGVPTFKNIFLNEINNISAIANHNLGHIRHDISIGGFAGIVEMSKFENIILNNIT +1156394

UP..9_1146 +820 NITANNKSRRESVYSGGFAGEI---YNGK-FNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDG-----RIFENISIYDVKNIHAINNAQYHGS +919
N+ A S + + GGF+G I + G F NI LN I N+ + Q Y GGFAG+I FENI + ++ N+ + ++
UP..2_1171 +1155797 NLNAFSNSL-DDLAIGGFSGIIRATHKGNYFKNIFLNNISNLHGK-------SEISTQHYIGGFAGKISSWNYHPLYFENIFLKNITNLKSSFDS----- +1156094

UP..9_1146 +920 DIENGGNSGS-HAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNE--NYAGKFAGRISVSN-NANPDISKIHIYHHKKDLTNATADQK-YWGNE +1019
E+ G + GGF G Y F NIYM+F PN + E K + Y GKF G + +S +HIY+H+ L +A D K Y ++
UP..2_1171 +1155497 -CEDKWCRGDVYMGGFVGDTSYGN-----FKNIYMFFNPNFELLVEDKTGKASKYVGKFYGSKDRGGYSSKTSLSNVHIYYHENSLKDANDDNKDYADDK +1155794

UP..9_1146 +1020 IQLHPYDDNNQG--YIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQII +1119
I+LH Y+DNN+ Y FKT D A + +V D NP + S K +P +PNI +IINEQATLD D+IISK DL+ QII
UP..2_1171 +1155197 IKLHSYNDNNKDEFYQQFKTQE----------DILA-KPIIVLPGDI---NPYMPSN-------KPTRPNLPNISNIINEQATLDKDNIISKEDLKYQII +1155494

UP..9_1146 +1120 ADLKDKFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYE +1219
ADLKDKFY V+IN L++LL+AY KIDKDNPTSKAEFLANYLLSK+KY DKERLDIAHSMIQSLDFLLAY NNTGKS+LT++AK LY +NQ +SKN Y+
UP..2_1171 +1154897 ADLKDKFYAVDINTLNDLLRAYKKIDKDNPTSKAEFLANYLLSKNKYS-DKERLDIAHSMIQSLDFLLAYSVNNTGKSRLTEEAKELYLSNQEKSKNTYK +1155194

UP..9_1146 +1220 EIDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKAS +1319
E+ KNKAVMNFIKNDLNEKTKDSKDLLKQLL KQKELD VKAYN YVDLINRG+KSKYDSAFKTLKNNLNSLISESQILATAIS NQ +L KW+ +A
UP..2_1171 +1154597 EVSEKNKAVMNFIKNDLNEKTKDSKDLLKQLLLKQKELDNVVKAYNVYVDLINRGIKSKYDSAFKTLKNNLNSLISESQILATAISNNQELLQKWKIEAH +1154894

UP..9_1146 +1320 DDSNGQFTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1409
D S +F IKGAFANAILINPKLNEITNDSGN+NDEYQKISRQIA+LQKQTP+FEYEEE+TEEV+E S+ QK KTCIVSDNY+TMNPC+V
UP..2_1171 +1154297 DKSSSHFIIKGAFANAILINPKLNEITNDSGNKNDEYQKISRQIADLQKQTPVFEYEEEKTEEVDETSLMQKSKTCIVSDNYKTMNPCIV +1154564

UPTC3659_1146 vs: UPTC16712_0709 in RM16712 (Campylobacter lari RM16712, complete genome.)
Gene length: 3987bp / 1329aa PV: No
Function: hemagglutinin domain-containing protein

Score: 2366.00 bits: 1024.43 e-value: 0.000000
length: 1390 gaps: 187 id: 706 positives: 862 coverage: 0.53 query coverage 0.55

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSIS-INGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGI +119
KKL+ +I+LS + S+LFS ALPSGGKFTHGTSGSI N K MNI GN +NS+IQWGGGF I GEKVNFG + +NYLNIAHGT KSTI G+
UP..2_0709 +685765 MKKLANHIILSGVTVSMLFSPLMALPSGGKFTHGTSGSINKPNDKTMNIIGNGKNSVIQWGGGFSIGQGEKVNFGGT----DKNYLNIAHGTDKSTIEGL +686062

UP..9_1146 +120 LEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQG----------ASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSW +219
L AG NNVFLINPNGVIITKTGTINANRFVAST+S+ ++ +EF A G +FSPVFKP K GNVVNMGNINA +VTLQG+KV+L A+T +
UP..2_0709 +686065 LNAGGNNVFLINPNGVIITKTGTINANRFVASTSSMDSKSMQEF-ADGKYTNGKVIDYTTFSPVFKP-SKAGNVVNMGNINANDVTLQGDKVVLNANTDY +686362

UP..9_1146 +220 DKK-NNKIKLNQITADSIDLKGNEVYVDISTINS---KNLTTDAK-KGIAYLSATGYYYNPT--RKYNDIIFTTKGVMDKTYNQYISIGSDLDWWHFAKG +319
DK NKI + I ++ I L+G EVYVDI I+ KN+ DAK KG+ YL A GYYYNP+ + + I K + N+YI IGSD+DWW+FAKG
UP..2_0709 +686365 DKTAGNKIGI--IKSNNIRLEGKEVYVDIGNIDGNSIKNINIDAKNKGLVYLNARGYYYNPSSFKVFSKITANNK----VSKNEYIGIGSDVDWWYFAKG +686662

UP..9_1146 +320 WNE-KDDFRNNVVGDTFKLTNDIDFKA------SSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNY- +419
WNE K+ FR+ ++LTNDIDF A SGQNYA YWIDLNG+GKK+ANEFTNMIVG+KD AF K+ DGQG TLKNI IDTTK+++N KNY
UP..2_0709 +686665 WNENKEGFRD--TASEYRLTNDIDFGANCKNGKCSGQNYASYWIDLNGNGKKEANEFTNMIVGYKD--AFTKSLDGQGNTLKNIFIDTTKIANN--KNYG +686962

UP..9_1146 +420 IGLFGKADGANFANINVDYKNGGINASNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASV---------GGFAGQING----------GTFCnis +519
+G+FG +GA F NIN+DY GGINA N VGGF G D G I++ + I N +L + GGFAG NG F
UP..2_0709 +686965 VGIFGTTNGASFTNINIDYMGGGINAQNINVGGFAGYFD-GFAENISLKKLHNIKNKVELDRGVIFESYDFYGTGGFAGNANGIFRNISLEDVKNFDVRI +687262

UP..9_1146 +520 inkinkiynTGEESFTGGFAGW---IKQDPYFEQI----IINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTS------ +619
N GGFAG + + Y + I IINN SD NL GGFAG+I+ G YNNI + + +++ + +
UP..2_0709 +687265 QNITKNNLGGYVIYGVGGFAGISFGMLDNIYLKDIGKFKIINNNSDNYLYSDSTNL-----GGFAGYIANGIYNNIKLEKIYDLLYVDDFYNNVDRGSYI +687562

UP..9_1146 +620 ----GGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGG-----KLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggf----ageasdgNFEN +719
GGFAG+I G NI + + I ++ Y KL GGFAG+IS G ++KI + +I NI+ + S AG GNF N
UP..2_0709 +687565 NTHLGGFAGYIANGNLENIILNDIKNINLKYTSYVDRYNRDLPMLKLYLGGFAGKISNGTYDKIYLYNINNITFDALNSVPVAAHLGGFAGNIETGNFNN +687862

UP..9_1146 +720 ISINDVKNISS----------------VGSAGGFAGRISG--------SKFENISINDVKNISSTT-----------SAGGFAGYLGNSDFSFITLNNIE +819
I++++++NI + V GGFAG I G F+NI +N++ NIS+ S GGFAG + S F I LNNI
UP..2_0709 +687865 ITLDNIQNIKANLDVIKYCLNCGLSIGVLNVGGFAGSIGGDFINVFGVPTFKNIFLNEINNISAIANHNLGHIRHDISIGGFAGIVEMSKFENIILNNIT +688162

UP..9_1146 +820 NITANNKSRRESVYSGGFAGEI---YNGK-FNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDG-----RIFENISIYDVKNIHAINNAQYHGS +919
N+ A S + + GGF+G I + G F NI LN I N+ + Q Y GGFAG+I FENI + ++ N+ + ++
UP..2_0709 +688165 NLNAFSNSL-DDLAIGGFSGIIRATHKGNYFKNIFLNNISNLHGK-------SEISTQHYIGGFAGKISSWNYHPLYFENIFLKNITNLKSSFDS----- +688462

UP..9_1146 +920 DIENGGNSGS-HAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNE--NYAGKFAGRISVSN-NANPDISKIHIYHHKKDLTNATADQK-YWGNE +1019
E+ G + GGF G Y F NIYM+F PN + E K + Y GKF G + +S +HIY+H+ L +A D K Y ++
UP..2_0709 +688465 -CEDKWCRGDVYMGGFVGDTSYGN-----FKNIYMFFNPNFELLVEDKTGKASKYVGKFYGSKDRGGYSSKTSLSNVHIYYHENSLKDANDDNKDYADDK +688762

UP..9_1146 +1020 IQLHPYDDNNQG--YIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQII +1119
I+LH Y+DNN+ Y FKT D A + +V D NP + S K +P +PNI +IINEQATLD D+IISK DL+ QII
UP..2_0709 +688765 IKLHSYNDNNKDEFYQQFKTQE----------DILA-KPIIVLPGDI---NPYMPSN-------KPTRPNLPNISNIINEQATLDKDNIISKEDLKYQII +689062

UP..9_1146 +1120 ADLKDKFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYE +1219
ADLKDKFY V+IN L++LL+AY KIDKDNPTSKAEFLANYLLSK+KY DKERLDIAHSMIQSLDFLLAY NNTGKS+LT++AK LY +NQ +SKN Y+
UP..2_0709 +689065 ADLKDKFYAVDINTLNDLLRAYKKIDKDNPTSKAEFLANYLLSKNKYS-DKERLDIAHSMIQSLDFLLAYSVNNTGKSRLTEEAKELYLSNQEKSKNTYK +689362

UP..9_1146 +1220 EIDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKAS +1319
E+ KNKAVMNFIKNDLNEKTKDSKDLLKQLL KQKELD VKAYN YVDLINRG+KSKYDSAFKTLKNNLNSLISESQILATAIS NQ +L KW+ +A
UP..2_0709 +689365 EVSEKNKAVMNFIKNDLNEKTKDSKDLLKQLLLKQKELDNVVKAYNVYVDLINRGIKSKYDSAFKTLKNNLNSLISESQILATAISNNQELLQKWKIEAH +689662

UP..9_1146 +1320 DDSNGQFTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1409
D S +F IKGAFANAILINPKLNEITNDSGN+NDEYQKISRQIA+LQKQTP+FEYEEE+TEEV+E S+ QK KTCIVSDNY+TMNPC+V
UP..2_0709 +689665 DKSSSHFIIKGAFANAILINPKLNEITNDSGNKNDEYQKISRQIADLQKQTPVFEYEEEKTEEVDETSLMQKSKTCIVSDNYKTMNPCIV +689932

UPTC3659_1146 vs: CD56_06000 in Slaughter Beach (Campylobacter lari strain Slaughter Beach, complete genome.)
Gene length: 3072bp / 1024aa PV: No
Function: hypothetical protein

Score: 980.00 bits: 426.56 e-value: 0.000000
length: 641 gaps: 58 id: 292 positives: 358 coverage: 0.54 query coverage 0.43

UP..9_1146 +27 ILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGILEAGNNNV +126
+LLS +VA+ LPSGGKFTHGTSG+I ING M+I GN +NS+IQWGGGF I +VNFG K + QNYLNIAHGTSKS I G+L AG NNV
CD56_06000 +1152702 MLLSPMVAADKPLNPNHLPSGGKFTHGTSGTININGNNMDIMGNGKNSVIQWGGGFSIGKDAQVNFG--KGQSGQNYLNIAHGTSKSMIEGLLNAGGNNV +1152999

UP..9_1146 +127 FLINPNGVIITKTGTINANRFVASTTSLQAQHFEEF----KAQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNKIKLNQITA +226
FLINPNGVIITKTG INANRFVAST+S+ +F +AQGA+FSP+FKP K GNVVNMGNINA + QGNKV+L ADTSWDK+ N +K I A
CD56_06000 +1152402 FLINPNGVIITKTGNINANRFVASTSSMSDDDMWKFAKSTQAQGAAFSPIFKPQ-KAGNVVNMGNINANSLLFQGNKVLLDADTSWDKEHNGVKFGIIKA +1152699

UP..9_1146 +227 DSIDLKGNEVYVDISTI--NSKNLTTDAK-------KGIAYLSATGYYYNPTRKYNDIIFTTKGV-MDKTYNQYISIGSDLDWWHFAKGWNEKDDFRNNV +326
I+L+GNEVYV+ ++I NS N T + KG AYL ATGYYYN T N I+ +G D + I S DWWHFAKGWNE+DDFR N
CD56_06000 +1152102 GNINLQGNEVYVNAASIDANSLNRNTPGRRAIEIHGKGHAYLDATGYYYN-TSAGNTILALKEGASKDFAVEGTVFINSVQDWWHFAKGWNERDDFRKNS +1152399

UP..9_1146 +327 VGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFGKADG--ANFANINV +426
++LT D+DF GQN+ANYW+DLNGDGKKQ NE+TNMI+G+ D+ AF + F GQG TLKN+ IDTT L D Y+G+FGKA +++ +
CD56_06000 +1151802 P-IFYRLTTDLDF---GGQNFANYWLDLNGDGKKQTNEYTNMIIGYSDDNAFYRKFLGQGHTLKNMYIDTTGLND---IQYVGIFGKASKGFGGISDLII +1152099

UP..9_1146 +427 DYKNGGINASN-DYVGGFIGLID-------KGIYSSITinnikeinnnkkLRTASVGGFAGQIN-----GGTFCnisinkinkiynTGEESFTGGFAGWI +526
DY N I +VGG IG ++ Y + N N K VGGFAG ++ N E GGF G I
CD56_06000 +1151502 DYNNKYIKTEGASHVGGLIGDVEGEDGYIFSKFYNIVVKNIDYIKATNGKYGNLFVGGFAGSLDNIKEASNIKLSNIKKIEASTSNIDEMVAVGGFVGRI +1151799

UP..9_1146 +527 KQD----PY-----FEQIIINNIDSIKSESDIINLPTVSSGGFAGWI----SGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVMGV--D +626
D P FE I I D IK + + + ++GGFAG + S K NNI + + I + G S G I G++ GV
CD56_06000 +1151202 DYDYIDVPISLFTGFENIEIIGTDEIKVSCNDVACSSATAGGFAGFLFLNSSNLKMNNITLDGISNIQS-DNKKGFSASAGGFIGEGEFMGYQKDGVSFS +1151499

UP..9_1146 +627 EIIAHRFDSLEDYGGKL-LAGGFAGEISRGEFN-KISIKDI +667
I S+ G A GF G G+ N K KDI
CD56_06000 +1150902 NIAIKNLKSINANGSAWGSAAGFMGYYRSGQPNYKRNFKDI +1151022

Score: 115.00 bits: 53.42 e-value: 0.000000
length: 318 gaps: 112 id: 89 positives: 116 coverage: 0.54 query coverage 0.43

UP..9_1146 +562 GGFAGWIRG------GKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVK +661
GG G + G K+ NI V +D I A G L GGFAG + IK+ +NI N + I
CD56_06000 +1151490 GGLIGDVEGEDGYIFSKFYNIVVKNIDYIKATNGKY-----GNLFVGGFAGSLD-------NIKEASNIKLS-----------------NIKKIEAS-TS +1151787

UP..9_1146 +662 NISSVGSAGGFAGRIS----------GSKFENI----------SINDVKNISSTTSAGGFAGYL----GNSDFSFITLNNIENITANNKSRRESVYSGGF +761
NI + + GGF GRI + FENI S NDV S+ +AGGFAG+L N ITL+ I NI ++NK + S +GGF
CD56_06000 +1151190 NIDEMVAVGGFVGRIDYDYIDVPISLFTGFENIEIIGTDEIKVSCNDVA--CSSATAGGFAGFLFLNSSNLKMNNITLDGISNIQSDNK-KGFSASAGGF +1151487

UP..9_1146 +762 AGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAG-RIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSK +861
GE G F G + DG F NI+I ++K I A NG GS AG Y K
CD56_06000 +1150890 IGE------------------------------------GEFMGYQKDGVSFSNIAIKNLKSINA------------NGSAWGSAAGFMGYYRSGQPNYK +1151187

UP..9_1146 +862 PKFNNIYMYFTPNSIIKS +879
F +I++YF P + I +
CD56_06000 +1150590 RNFKDIFIYFDPEATITT +1150641

Score: 189.00 bits: 85.34 e-value: 0.000000
length: 673 gaps: 155 id: 170 positives: 262 coverage: 0.54 query coverage 0.43

UP..9_1146 +663 AGGFAGRISGSK-FENISINDVKNISSTTS----AGGFAGYLGNSDFSFITL--------NNIENI------TANNKSRRESVYSGGFAGEIY----NGK +762
GGFAG + K NI + ++K I ++TS G++G D+ +I + NIE I + N S +GGFAG ++ N K
CD56_06000 +1151370 VGGFAGSLDNIKEASNIKLSNIKKIEASTSNIDEMVAVGGFVGRIDYDYIDVPISLFTGFENIEIIGTDEIKVSCNDVACSSATAGGFAGFLFLNSSNLK +1151667

UP..9_1146 +763 FNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAG-------RIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPK +862
NNI+L+ I NI+S +N+ A AGGF G + DG F NI+I ++K I A NG GS AG Y K
CD56_06000 +1151070 MNNITLDGISNIQS----DNKKGFSAS---AGGFIGEGEFMGYQKDGVSFSNIAIKNLKSINA------------NGSAWGSAAGFMGYYRSGQPNYKRN +1151367

UP..9_1146 +863 FNNIYMYFTPN-SIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNA-----TADQKYWGNEIQLHPYDDNNQGYIDFKTAALAALNGL +962
F +I++YF P +I + S+ N+ + N+ + I +Y+ L + DQ Y G+E L
CD56_06000 +1150770 FKDIFIYFDPEATITTTGSQKTNNFF-----FTTQKNDFDETYDNIFVYYKNGTLNDTYGNMGITDQSYNGDE--------------------------L +1151067

UP..9_1146 +963 KEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQP----KPLI-----PNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLK +1062
K+ +F+ NIT P FN K P + P++E I N++ + ++ + I+ D+ + Y V IN E++
CD56_06000 +1150470 KQ--------------EFEQKIANITKPS---FNEKPEDVDGTPGLFPYEKPDVEAIKNQKVEFQKE--WYNKEVVQAILDDILNGKYRVSINKFGEIVF +1150767

UP..9_1146 +1063 AYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEK +1162
S + T LD S+ QSLDFL + N+G + T + K +Y A N++ +E + + KN E
CD56_06000 +1150170 HVSTVGGVEIT----------------------LD---SIKQSLDFLDTLKEKNSGFDQ-TVELKDIY-AKYNKALKIKDEYVAAQEHLFKDGKNSFYE- +1150467

UP..9_1146 +1163 TkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFANAILIN +1262
+ ++ YN+YV I G + D + + +NSL + + A+ T L + F G FA + N
CD56_06000 +1149870 -------------TYAKYQKELEIYNSYVKEIEAGKRKINDPEYLASLDKINSLATTLKNQRDAVNGIATKLNDENIAKNEYGYTNFKFTGDFALDFVHN +1150167

UP..9_1146 +1263 PKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1335
P+ ++ N E + +Q A L EEE EE++E+S+ QKG TCIVSDN++TMNPC+VG
CD56_06000 +1149570 PQSPDVDNPNKPELPDTDLEFKQTASLNLIGDHAIEEEESKEEIDESSLKQKGLTCIVSDNFKTMNPCIVGGL +1149786

UPTC3659_1146 vs: CPEL_1564 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3069bp / 1023aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1131.00 bits: 491.69 e-value: 0.000000
length: 742 gaps: 117 id: 347 positives: 430 coverage: 0.58 query coverage 0.46

UP..9_1146 +1 MLIFIPRGGESNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFG-NSKFEG +100
M +F PRGG SNNFDLT S KKL+ +ILLS IVASLLFS +FALPSGGKFTHGTSG+I + G M I GNK NS+IQWGGGFNI GE VNFG NSK
CPEL_1564 +1608544 MAVFSPRGGGSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSK--- +1608841

UP..9_1146 +101 QQNYLNIAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFK-----AQGASFSPVFKPNPKGGNVVNMGNINAKNVT +200
NYLNIAHGT KSTIAGIL A NNVFLINPNGVIITKTG INANRFVAST+S+ +F QGASFSPVFKPNPKGGNV+NMGNINA +V
CPEL_1564 +1608244 --NYLNIAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVL +1608541

UP..9_1146 +201 LQGNKVMLSADT-SWDKKNNKIK-LNQITADSIDLKGNEVYVDISTIN--SKNLTTDAKKGIAYLSATGYYYNPT--RKYNDIIFTTKGVMDKTYN---- +300
L GNKV++ + DK N+IK +++ I L GNE+Y DI+T K T KG YL ATGYYYNP+ + ++ I+ G+ N
CPEL_1564 +1607944 LIGNKVLIQGYLNTKDKTFNQIKAIDEGKKANIHLVGNEIYADIATFKDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGINHNNTNFSNM +1608241

UP..9_1146 +301 QYISIGSDLDWWHFAKGWNE-KDDFRNNVVGDTFKLTNDIDFKA------SSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKN +400
+Y+ IGSD+DWWHFAKGWNE +DFR + + ++L NDIDF+A +GQNYANYW+DLNGDG KQ NEFT MI+ + F KTFDGQG+TLKN
CPEL_1564 +1607644 KYVGIGSDVDWWHFAKGWNEYNNDFR--TIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMII---NGNYFTKTFDGQGYTLKN +1607941

UP..9_1146 +401 INIDTTKLSDNNSKNYIGLFGKADGANFANINVDYKNGGINA-SNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisin +500
INIDTTKL N S ++G+FG A + N+NVDY GGI A S Y+GGF+GL G I+ + +G F+ GG
CPEL_1564 +1607344 INIDTTKLKYNPS--HVGIFG-AITSTIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNIS--------------LSNMGYFS--FTGG-------- +1607641

UP..9_1146 +501 kinkiynTGEESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNI +600
SF GGFAG + QD I +NNI I +N T GGFAG++ G Y NI++ ++ +I ++GGFAG+ K NI
CPEL_1564 +1607044 -----------SFIGGFAGSL-QDGIHSNISLNNIGDIS-----VNNVTF-MGGFAGYLQDGIYSNISLNNIGDISV--NNVDSTGGFAGYAGIVKICNI +1607341

UP..9_1146 +601 AVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSVGSAGGFAGRI--SGSK +700
++ + I ++ E+ G F +S+ +F I +K+I NI F ND +AGGF G + +K
CPEL_1564 +1606744 SLEKIGNINRIAYNGYEENSH---VGAFIARVSKVDFSNIYLKNIGNI---------------------FNEAKKNDFLH----ATAGGFIGYLMEGDTK +1607041

UP..9_1146 +701 FENISI---NDVKNISSTTSAGGFAGYLGNSDFSFITLNNIE +742
FENI I ++K I T +G F G L D + T NNI
CPEL_1564 +1606444 FENIFIFFNPNIKIINETGLSGKFFGAL--NDKATYTFNNIH +1606567

Score: 651.00 bits: 284.63 e-value: 0.000000
length: 662 gaps: 106 id: 248 positives: 336 coverage: 0.58 query coverage 0.46

UP..9_1146 +648 NISINDVKNISSVGSA--GGFAGRISGSKFENISINDVKNIS--STTSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNI +747
NIS+ ++ S G + GGFAG + NIS+N++ +IS T GGFAGYL + +S I+LNNI +I+ NN +GGFAG K NI
CPEL_1564 +1607203 NISLSNMGYFSFTGGSFIGGFAGSLQDGIHSNISLNNIGDISVNNVTFMGGFAGYLQDGIYSNISLNNIGDISVNNVDS-----TGGFAGYAGIVKICNI +1607500

UP..9_1146 +748 SLNHIQNIES-SYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNI--HAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYF +847
SL I NI +Y E+ + G F R+ F NI + ++ NI A N H + AGGF GY+ KF NI+++F
CPEL_1564 +1606903 SLEKIGNINRIAYNGYEENS------HVGAFIARVSKVDFSNIYLKNIGNIFNEAKKNDFLHAT-----------AGGFIGYL---MEGDTKFENIFIFF +1607200

UP..9_1146 +848 TPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWG---NEIQLHPYDDNNQG--YIDFKTAALAALNGLKEIDCGAGR +947
PN I E+ L +GKF G ++ + A IHIYHH+KDL NATAD+ YWG ++IQ+H Y D Q Y DF + A
CPEL_1564 +1606603 NPNIKIINETGL----SGKFFG--ALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKA---------------- +1606900

UP..9_1146 +948 KCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADL------KDKFYIVNINILDELLKAYSKIDKDNPTS +1047
I P IP+ P D+I L +DD+ D+ ++II DL K + + +N+LD +LK +
CPEL_1564 +1606303 -------------NTIEKPTIPN---------KPSDNDVI-----LASDDLYK--DIVDKIITDLYNSNTDKKIYNLYLVNLLD-MLKDKANYSNMSENQ +1606600

UP..9_1146 +1048 KAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNN-TGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEKTkdskdllkql +1147
K EF+A Y LS DK A ++QSLDFLLAY+ N + SK DA+ L N + N + I KN + NF++NDL +S L L
CPEL_1564 +1606003 KVEFVAKYFLSGDKTK--------ALEVVQSLDFLLAYEKNGLSTASKDKFDAEALNLKNTLLA-NTNKVIKNKND-LSNFLENDLKNLLINSNQALASL +1606300

UP..9_1146 +1148 lakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFANAILINPKLNEITNDSG +1247
Q++L A+ YN YV IN K ++ +LK ++ L S LAT I+ NQ L WQ +ASD SN QF I G F N L P L ++ N SG
CPEL_1564 +1605703 KLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSNQQFNIIGKFDNIALTIPNLEKLNNSSG +1606000

UP..9_1146 +1248 NENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1309
END+YQK+SRQIA QKQTP F+YEEEET+E++EA++ Q+ +TCIVSDN++TMNPCVV S+
CPEL_1564 +1605403 IENDDYQKLSRQIASSQKQTPTFKYEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVVESY +1605586

UPTC3659_1146 vs: CPEL_1036 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3378bp / 1126aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1023.00 bits: 445.10 e-value: 0.000000
length: 711 gaps: 101 id: 331 positives: 409 coverage: 0.51 query coverage 0.44

UP..9_1146 +1 MLIFIPRGGESNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFG-NSKFEG +100
M +F PRGG SNNFDLT S KKL+ +ILLS IVASLLFS +FALPSGGKFTHGTSG+I + G M I GNK NS+IQWGGGFNI GE VNFG NSK
CPEL_1036 +1066195 MAVFSPRGGGSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSK--- +1066492

UP..9_1146 +101 QQNYLNIAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEF----KAQGASFSPVFKPNPKGGNVVNMGNI-NAKNVT +200
NYLNIAHGT KSTIAGIL A +NNVFLINPNGVIITKTG INANRFVAST+S+ + +F + QG SFSPVFKPN GGNVVNMG I + KN+T
CPEL_1036 +1066495 --NYLNIAHGTNKSTIAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFANLSQEQGNSFSPVFKPN--GGNVVNMGGILDVKNIT +1066792

UP..9_1146 +201 LQGNKVMLSADTSWDKKNNKIKLNQITADSIDLKGNEVYVDISTINS---KNLTTDAKKGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYN------- +300
QGNKV+L A+T + +K+ I N IT L+G EVYVD+ IN +N+ A KG YL A+GYYYNP V DK N
CPEL_1036 +1066795 FQGNKVILNANTNYTEKDKFISANNIT-----LEGKEVYVDVGNINGDKIQNIKISADKGSMYLNASGYYYNPNSFL---------VFDKYRNSNSNFKV +1067092

UP..9_1146 +301 -QYISIGSDLDWWHFAKGWNE-KDDFRNNVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDT +400
+Y+ IGS DWWHFAKGWN+ K+ FRN ++LTN+I+F AS G+NYANY ID E MI+G AF K F+GQG+ L+NINI+
CPEL_1036 +1067095 YKYVGIGSVQDWWHFAKGWNDNKEGFRN--TASEYRLTNNINFGASEGKNYANYCID--------GFECISMIIGVNYTNAFNKIFNGQGYKLENININ- +1067392

UP..9_1146 +401 TKLSDNNSKNYIGLFGKADGANFANINVDYKNGGINA----SNDY--VGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGT-FCnisi +500
+ + K +G+FG + A N+N+DYK GGINA N Y VGGFIG+ + S+I +K IN T VGGF G F NI I
CPEL_1036 +1067395 --INESGKKQNVGIFGYINNATIENVNIDYKGGGINAKYTPNNSYIGVGGFIGIAEN---STIRNISLKNINKITATNTFGVGGFIGIAEKNVNFKNILI +1067692

UP..9_1146 +501 nkinkiynTGEESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYN--------NIAVMDVDEIIAISTHHGTSGGFAGW +600
+ N + + S GGF + FE I + NI+SIK SDI N +GGF G S N NI + ++ I + SGGF G
CPEL_1036 +1067695 DGGNTMKISSTGSNVGGFIASGSEGSIFENIYVKNINSIK--SDIYN-----AGGFIGGTSSSSTNWKDFVFFKNIHIANIGAIDGL-----YSGGFIGS +1067992

UP..9_1146 +601 IRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgN---FENISINDVKNISSVGS-- +700
G K NI + +++I+ GK AGG AG +S GE+ ISI +I I S S + G + N+ I D+ I ++ +
CPEL_1036 +1067995 ATGVKTENIKIEEINKIL-----------GKNSAGGLAGILSPGEYSDISINNIGIIESANSGGFAGAMDTGSNNNKKNTIITNVYIKDINEIKAINTSD +1068292

UP..9_1146 +701 --AGGFAGRIS +711
AGGF G++S
CPEL_1036 +1068295 AYAGGFIGKVS +1068325

Score: 481.00 bits: 211.30 e-value: 0.000000
length: 797 gaps: 120 id: 242 positives: 366 coverage: 0.51 query coverage 0.44

UP..9_1146 +526 VSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWI-RGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNI +625
+ GGF G NI++ ++++I A T GGF G + + NI + G + + + S G +A G G I F I +K+I I
CPEL_1036 +1067425 IGVGGFIGIAENSTIRNISLKNINKITATNTFG--VGGFIGIAEKNVNFKNILIDGGNTM---KISSTGSNVGGFIASGSEGSI----FENIYVKNINSI +1067722

UP..9_1146 +626 ssnfsssa-----saggfageasdgNFENISINDVKNISSVGSAGGFAGRISGSKFENISINDVKNISSTTSAGGFAGYLGNSDFSFITLNNIENITANN +725
S+ + ++ F+NI I ++ I + S GGF G +G K ENI I ++ I SAGG AG L ++S I++NNI I
CPEL_1036 +1067725 KSDIYNAGGFIGGTSSSSTNWKDFVFFKNIHIANIGAIDGLYS-GGFIGSATGVKTENIKIEEINKILGKNSAGGLAGILSPGEYSDISINNIGII---- +1068022

UP..9_1146 +726 KSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPE-NEDEWF-AKQVYAGGFAGRIDG----------RIFENISIYDVKNIHAINNAQYHGSDIE +825
ES SGGFAG + G NN I N+ Y + NE + YAGGF G++ IF NI+I + +
CPEL_1036 +1068025 ----ESANSGGFAGAMDTGSNNNKKNTIITNV---YIKDINEIKAINTSDAYAGGFIGKVSSINAPTGENTSNIFNNITIDKIGKFYI------------ +1068322

UP..9_1146 +826 NGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGNEIQLHPYDD +925
NS ++ GG G I + + F I ++F N I E N N GK G+ S ++ Y+ ++ + ++ Y G +Q + +
CPEL_1036 +1068325 -KSNSRAYTGGLIGIIFNNFNANYNFSSINLFFDSNMRITGE---NHN-VGKIIGK---STDSRLSFNNSNFYYIAENFAGSRSEN-YSGFNLQQYVKIN +1068622

UP..9_1146 +926 NNQGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPL-IPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYI +1025
Q Y +F T T P+I F + + L +P++E I NE L+ DD+ K+ ++++II D+ K+Y
CPEL_1036 +1068625 EQQKYNEFTTK------------------------------DQTTKPNIGLFQSNNKELLDLPDVEKIKNEITILEKDDLF-KDTIQKEIIEDIIKKYYF +1068922

UP..9_1146 +1026 VNINILDELLKAYSKIDKDNP-TSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTN---NTGKSKLTDDAKVLYEANQNRSKNKYEEIDGK +1125
V+I LD+LLK Y K++ +N + F+ N+LL + KE +++SLDFLLAY+TN N K L + + + AN+ N + + +
CPEL_1036 +1068925 VDIKTLDDLLKTYNKLNSNNSKEERINFIKNHLLISKSEQEAKE-------VVESLDFLLAYKTNGLENAEKNGLLKNDETI-TANRAIQSNVKKTLSYE +1069222

UP..9_1146 +1126 NKAVMNFI---KNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDD +1225
+++F+ KN L + +LL++L Q L A+ YNAYVDLIN + D+ + +K N+N LI +S+ LAT I Q +L+KWQ+K+ +D
CPEL_1036 +1069225 QDLIVDFLQNKKNGLKWLVDYTNNLLQELKNTQTALKDAILKYNAYVDLINSNKAERDDAKLEAIKKNINKLIFQSKTLATEIDNKQIVLSKWQNKSKND +1069522

UP..9_1146 +1226 SNGQFTIKGAFANAILI-NPKLNEITNDSGNEND-----EYQKIS---RQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1322
SN +F I G F LI NP LN+ D G E D E+ I Q A L + +YEEEE +E+ E Q+ TCIV DNY+TMNPCVV
CPEL_1036 +1069525 SNEHFVILGKFNYEQLIDNPNLNKPNGDGGKEPDVKPDPEFPNIDLEFEQTASLN----LIKYEEEEEKEIGETQGEQRSITCIVNDNYKTMNPCVV +1069813

UPTC3659_1146 vs: CPEL_0470 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3444bp / 1148aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 892.00 bits: 388.59 e-value: 0.000000
length: 852 gaps: 128 id: 359 positives: 441 coverage: 0.51 query coverage 0.46

UP..9_1146 +1 MLIFIPRGGESNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFG-NSKFEG +100
M +F PRGG SNNFDLT S KKL+ +ILLS IVASLLFS +FALPSGGKFTHGTSG+I + G M I GNK NS+IQWGGGFNI GE VNFG NSK
CPEL_0470 +475433 MAVFSPRGGGSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHIHGNKVNSVIQWGGGFNINKGESVNFGGNSK--- +475730

UP..9_1146 +101 QQNYLNIAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKA----QGASFSPVFKPNPKGGNVVNMGNINAKNVTL +200
NYLNIAHGT KSTIAGIL A NNVFLINPNGVIITKTG INANRFVAST+S+ + +F Q FSPVFKP K G VVNMGNINA +V L
CPEL_0470 +475733 --NYLNIAHGTNKSTIAGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNEDMNKFAKLNENQAGNFSPVFKP-QKAGSVVNMGNINANDVLL +476030

UP..9_1146 +201 QGNKVMLSADTSWDKKNNKIKLNQITADSIDLKGNEVYVDISTINSKNL--TTDAKKG-----IAYLSATGYYYNPTR----KYNDIIFTTKGVMDKTYN +300
G KV + KL + + L GN VY+D + N + T K G + + GY Y D T + +
CPEL_0470 +476033 IGHKVDIQGG----------KLGNANSKT-HLVGNYVYIDADSANLNSIINVTAIKDGYIQRQMINFAKDGYKISNANINKVNYTDNTNVTHNGISSNFK +476330

UP..9_1146 +301 QYISIGS-------DLDWWHFAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSG--------QNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFD +400
+ ++IG ++WWHFAKGWNE V D FKL +IDF G QNYANY I + T MIVG+ SAF K F+
CPEL_0470 +476333 KALTIGNMENEKANAIEWWHFAKGWNEGLGHIRSV--DEFKLVGNIDFSGNKGKGEEGKDWQNYANYCI--------SQGQCTSMIVGYDYQSAFNKIFN +476630

UP..9_1146 +401 GQGFTLKNINIDTTKLSDNNSKNYIGLFGK-ADGANFANINVDYKNGGI---NASNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQI +500
GQGFTLKNINIDTTKL +G+FG G F NIN+DY GGI A YVGGF G ++ I + NI I R VGGFAG
CPEL_0470 +476633 GQGFTLKNINIDTTKLQT------VGIFGHIIRGGFFNNINIDYMGGGIKSVSADSLYVGGFAGYGGGS-FTNIFLSNIGNISASADNRVY-VGGFAGY- +476930

UP..9_1146 +501 NGGTFCnisinkinkiynTGEE--SFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTH-HGTSG +600
GG+F NI + I I + S+ GGFAG + I + NI I + +D V GGFAG + G + NI + ++ I A + + +G
CPEL_0470 +476933 -GGSFTNIFLSNIGNISASASNIYSYAGGFAG---HSNSATNIFLSNIGNISASAD----NRVYVGGFAGHVGGSSFTNIFLSNIGNISASADNVYSFAG +477230

UP..9_1146 +601 GFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGE---------FNKISIKDITNIssnfsssasa---ggfageasdgNFENIS +700
GF G+ G + + +I F AGGF G+I G+ F IS+ DI NI + + GG + G F NIS
CPEL_0470 +477233 GFVGY---GGSDSWLIGSFTDI----FLNNIGNINANNAGGFIGDIDSGQTPDGAWHPVFTNISLNDIGNIIAAGDDGHAGGFIGGNNSSNASGRFTNIS +477530

UP..9_1146 +701 INDVKNISSVGS---AGGFAGRISGSKFENISINDVKNISSTTSAGGFAGY-LGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIY---NGKFNNI +800
+ND+ NI + G AGGFAG SG F NIS+N + IS S GGF G+ + +F+ I+LN I I S + S +GGF G +Y N F NI
CPEL_0470 +477533 LNDIGNIIAAGNYGHAGGFAGSFSGN-FTNISLNSIGSISGKASTGGFVGFVVPTGNFTNISLNSIGSI-----SGKAS--TGGFVGYVYDVRNLTFKNI +477830

UP..9_1146 +801 SLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRI---FENISIYDVKN +852
+ NI S T E+ D AG F G ++ + F NI IY K+
CPEL_0470 +477833 YIFFNPNI--SITSEDYDGE------AGKFFGALNDEVTYTFNNIHIYHHKD +477986

Score: 380.00 bits: 167.74 e-value: 0.000000
length: 787 gaps: 187 id: 229 positives: 332 coverage: 0.51 query coverage 0.46

UP..9_1146 +598 KLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSVGS----AGGFAGRISGSKFENISINDVKNISSTTS-- +697
++ GGFAG G F I + +I NIS+ S S G S+ NI + ++ NIS+ GGFAG + GS F NI + ++ NIS++
CPEL_0470 +476792 RVYVGGFAGY--GGSFTNIFLSNIGNISASASNIYSYAGGFAGHSNS-ATNIFLSNIGNISASADNRVYVGGFAGHVGGSSFTNIFLSNIGNISASADNV +477089

UP..9_1146 +698 ---AGGFAGYLGNSD-------------------------------------------FSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISL +797
AGGF GY G SD F+ I+LN+I NI A + GG G+F NISL
CPEL_0470 +477092 YSFAGGFVGY-GGSDSWLIGSFTDIFLNNIGNINANNAGGFIGDIDSGQTPDGAWHPVFTNISLNDIGNIIAAGDDGHAGGFIGGNNSSNASGRFTNISL +477389

UP..9_1146 +798 NHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHA-INNAQYHGSDIENGG------------NSGSHAGGFAGYINYDKHSKPK +897
N I NI ++ +AGGFAG G F NIS+ + I + G + G + GGF GY+ YD
CPEL_0470 +477392 NDIGNIIAA----------GNYGHAGGFAGSFSGN-FTNISLNSIGSISGKASTGGFVGFVVPTGNFTNISLNSIGSISGKASTGGFVGYV-YDVRN-LT +477689

UP..9_1146 +898 FNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGN---EIQLHPYDDNNQ--GYIDFKTAALAALNGLK +997
F NIY++F PN I SE E AGKF G ++ + IHIYHHK DL NAT D+ YWGN +IQ+H Y D Q Y DF + A +
CPEL_0470 +477692 FKNIYIFFNPNISITSEDYDGE--AGKFFG--ALNDEVTYTFNNIHIYHHKDDLANATTDKNYWGNTNDKIQIHTYTDETQANAYKDFLSKANS------ +477989

UP..9_1146 +998 EIDCGAGRKCLVFTSDFKVDNPNITSPDI-PDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLKAYSKIDKD- +1097
++ PNIT P I PD P P D+I L +DD+ D+ + II ++++ Y ++I L L++A+ ++KD
CPEL_0470 +477992 ------------------IEKPNITPPTITPD------NPNKPSDNDVI-----LASDDL--HQDIIQGIIDSIRNEKYTIDIKNLYSLIQAFKGLNKDS +478289

UP..9_1146 +1098 NPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFI---KNDLNEKTkdsk +1197
N + +L KD DDK A S+ QS+ FLL Y N KL A LY N N + ++ ++ ++ KN++ + + +
CPEL_0470 +478292 NENEIKTIVKTHLGIKD---DDK-----ALSIAQSISFLLHYNEINF-NNKLDKTALELY--NNQIKPNVFNTLE-----IITYLDTNKNNIIAQLQQYE +478589

UP..9_1146 +1198 dllkqllakqkeldSAVKAYNAYVDLINRGVKSKYD---------------SAFKTLKNNLNSLISE----SQILATAISSNQTILTKWQDKASDDSNGQ +1297
+ K++ A +N +DL+N+G K Y+ A+ +L N++ L S+ +Q + T + Q K + D
CPEL_0470 +478592 SIKNDFKIKEQAYFKAQAEFNKLLDLVNKG-KLNYNDPKFTQAFDNWTKAYNAYNSLSNDIGELNSKVNQYTQYINTTLGYKQFAFVKFDNIIKTD---- +478889

UP..9_1146 +1298 FTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1384
L P L +I N G + Q + Q A L EEEE +E+EE ++ Q+ +TCIVSDN++TMNPCVV S+
CPEL_0470 +478892 -----------LTKPILPDIDNSLGGDK---QPVFEQTASLNLIGDNAIEEEEEKKEIEETALTQRARTCIVSDNFKTMNPCVVESY +479150

UPTC3659_1146 vs: CPEL_1035 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3408bp / 1136aa PV: Yes
Function: hemagglutinin domain-containing protein

Score: 1250.00 bits: 543.02 e-value: 0.000000
length: 691 gaps: 93 id: 350 positives: 426 coverage: 0.64 query coverage 0.56

UP..9_1146 +1 MLIFIPRGGESNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFG-NSKFEG +100
M +F PRGG SNNFDLT S KKL+ +ILLS IVASLLFS +FALPSGGKFTHGTSG+I + G M I GNK NS+IQWGGGFNI GE VNFG NSK
CPEL_1035 +1062654 MAVFSPRGGGSNNFDLTPS-KKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSK--- +1062951

UP..9_1146 +101 QQNYLNIAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVT +200
NYLNIAHGT KSTIAG+L A NNVFLINPNGVIITKTG INANRFVAST+S+ ++ +EF G +FSPVFKPNPKGGNV+NMGNINA +VT
CPEL_1035 +1062954 --NYLNIAHGTNKSTIAGVLNASGNNVFLINPNGVIITKTGNINANRFVASTSSMDSKAMQEFANMKTFNDGLAFSPVFKPNPKGGNVINMGNINANDVT +1063251

UP..9_1146 +201 LQGNKVMLSADTSWDKKNNKIKLNQITADSIDLKGNEVYVDISTINSKNLTTDAKKGIAYLSATGYYYNPTRKYNDIIFTTKGVMDKTYNQYISIGSDLD +300
LQGNKV+L A+TS DK N IKLNQIT D + +K NE YVD++T + + A KG AYLSATGYYYNP R+YN+ + ++KTYNQ+ISIGSD+D
CPEL_1035 +1063254 LQGNKVLLQAETSLDKDTNNIKLNQITTDNLTIKANEAYVDVATTKTNKINITANKGNAYLSATGYYYNPKRQYNE-FNSINNKINKTYNQFISIGSDVD +1063551

UP..9_1146 +301 WWHFAKGWNEKDDFRNNVVGDTFKLTNDIDFKA------SSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDN +400
WWHFAKGWNE +DFR + ++L NDI+F A +GQNYANYW+DLN DG KQ NEFT MIVG NS F+K FDGQG+TLKNINIDTTKL DN
CPEL_1035 +1063554 WWHFAKGWNESNDFR--TIASEYRLINDINFNANCKNGICTGQNYANYWVDLNADGIKQDNEFTSMIVGEDYNSEFSKNFDGQGYTLKNINIDTTKL-DN +1063851

UP..9_1146 +401 NSKNYIGLFGKADGANFANINVDYKNGGINASNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTA--SVGGFAGQINGGTFCnisinkinkiynTGE +500
Y G+FG A A F NINVDY G + Y GFI SS N L A GGF G + NI IN I +I
CPEL_1035 +1063854 TY--YAGIFGDARNATFKNINVDYMGGSVIGY--YAAGFIA-------SSSDSKFYNMKISNIGLIQARHRSGGFIADAYRGAYYNIHINNIKEISG--- +1064151

UP..9_1146 +501 ESFTGGFAGWIKQ-------DPYFEQIIINNIDSIKSE--------SDIINL-------------------------------PTVSSGGFAGWI---SG +600
++ +GGF G Q + YF+ I I+NI++I+ E D+ + T +GGF G I G
CPEL_1035 +1064154 KAASGGFVGFYSQPDSNYKDNVYFQDIYIDNINTIRDEDGHAGGFAGDLYSIYAGRTILKNIYINNINSIFASGDYGIYGGKDNTAKAGGFVGSIGLYGG +1064451

UP..9_1146 +601 GKYN--NIAVMDVDEIIAISTHHGTSGGFAGWIRGG--KYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNI +691
G Y+ N+++ ++ I ++ T GGFAG + GG K+ NI++ + II+ + + G +GGFAG I+ G FN IS+ +I I
CPEL_1035 +1064454 GAYDIFNVSINNIGTIKSLGKITAT-GGFAGELLGGGAKFENISLNNIKNIISEN-NNKDSLGRSASSGGFAGYITGGYFNNISLNNIGTI +1064724

Score: 119.00 bits: 55.15 e-value: 0.000000
length: 128 gaps: 14 id: 52 positives: 70 coverage: 0.64 query coverage 0.56

UP..9_1146 +455 TASVGGFAGQIN---GGTF--CnisinkinkiynTGEESFTGGFAG-WIKQDPYFEQIIINNIDSIKSESDIINL--PTVSSGGFAGWISGGKYNNIAVM +554
TA GGF G I GG + N+SIN I I G+ + TGGFAG + FE I +NNI I SE + + + SSGGFAG+I+GG +NNI++
CPEL_1035 +1064334 TAKAGGFVGSIGLYGGGAYDIFNVSINNIGTIKSLGKITATGGFAGELLGGGAKFENISLNNIKNIISENNNKDSLGRSASSGGFAGYITGGYFNNISLN +1064631

UP..9_1146 +555 DVDEIIAISTHHGT------SGGFAGWI +582
++ I +I T SGGF G +
CPEL_1035 +1064634 NIGTIKSIKTDTSHKEVGIYSGGFVGFL +1064715

Score: 117.00 bits: 54.29 e-value: 0.000000
length: 120 gaps: 15 id: 42 positives: 66 coverage: 0.64 query coverage 0.56

UP..9_1146 +506 IIINNIDSIKSESDIINLPTVSSGGFAGWISGG--KYNNIAVMDVDEIIAIST------HHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGG +605
+ INNI +IKS I ++GGFAG + GG K+ NI++ ++ II+ +SGGFAG+I GG +NNI++ + I + + D+ G
CPEL_1035 +1064403 VSINNIGTIKSLGKI-----TATGGFAGELLGGGAKFENISLNNIKNIISENNNKDSLGRSASSGGFAGYITGGYFNNISLNNIGTIKSIKTDTSHKEVG +1064700

UP..9_1146 +606 KLLAGGFAGEIS-RGEFNKI +625
+ +GGF G ++ R N I
CPEL_1035 +1064703 -IYSGGFVGFLTYRANINNI +1064760

Score: 822.00 bits: 358.40 e-value: 0.000000
length: 796 gaps: 120 id: 281 positives: 405 coverage: 0.64 query coverage 0.56

UP..9_1146 +532 AGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsss +631
AG I+ M + I I H SGGF G Y NI + + EI GK +GGF G S+ + N KD N+
CPEL_1035 +1063920 AGFIASSSDSKFYNMKISNIGLIQARH-RSGGFIADAYRGAYYNIHINNIKEI-----------SGKAASGGFVGFYSQPDSN---YKD--NVY------ +1064217

UP..9_1146 +632 asaggfageasdgNFENISINDVKNISSV-GSAGGFAGRI-----------------SGSKFENISINDVKNISSTTSAGGFAGYLG-----NSDFSFIT +731
F++I I+++ I G AGGFAG + S F T AGGF G +G D ++
CPEL_1035 +1064220 --------------FQDIYIDNINTIRDEDGHAGGFAGDLYSIYAGRTILKNIYINNINSIFASGDYGIYGGKDNTAKAGGFVGSIGLYGGGAYDIFNVS +1064517

UP..9_1146 +732 LNNIENITANNKSRRESVYSGGFAGEIYNG--KFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDI +831
+NNI I KS + +GGFAGE+ G KF NISLN I+NI S N + + +GGFAG I G F NIS+ ++ I +I H
CPEL_1035 +1064520 INNIGTI----KSLGKITATGGFAGELLGGGAKFENISLNNIKNIIS---ENNNKDSLGRSASSGGFAGYITGGYFNNISLNNIGTIKSIKTDTSHKE-- +1064817

UP..9_1146 +832 ENGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGN-------- +931
G ++GGF G++ Y + NNI+M+ + I + S E +GKF G I + + S I IYHH+ DLTNATADQ YW N
CPEL_1035 +1064820 -----VGIYSGGFVGFLTY----RANINNIFMFMDQGASILA-SGGSESLSGKFFGMIKEVSDFGINFSNINIYHHENDLTNATADQAYWKNNLINFNAN +1065117

UP..9_1146 +932 ---EIQLHPYDDNNQGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQ +1031
EI +H Y D QGY DFK AL ++GLKEIDC G+KCL+FT+DF ++ P ITSP IPN++ I+NE+ TL+ DD+IS +
CPEL_1035 +1065120 INGEINIHTYTDKTQGYTDFKKQALT-IDGLKEIDCDNGKKCLIFTTDFDIEKPTITSP-------------IPNLDSILNEKPTLNKDDLISNAVWNDY +1065417

UP..9_1146 +1032 IIADLKDKFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNK +1131
II D+ Y++NI +LD+LLK Y + + +F+ YL K+ + A +++QSL FL AY+ + K++ ++AK +E ++ +K
CPEL_1035 +1065420 IIKDIDKIKYVINIRLLDKLLKEYKTLANKTEDEQVKFITAYLGVKE---------NDARALLQSLSFLNAYKDHDINKAQFENNAKKDFEQSFKKADDK +1065717

UP..9_1146 +1132 YEEIDGKNKAVMNFIKNDLN-EKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQD +1231
++ + KNK + + LN E D+ KQL Q +L +KAYN ++ LI++G+K + D AF +KNN+ L E+++L +S + L +D
CPEL_1035 +1065720 IKDFN-KNKNLWHTKLDKLNKEVVSLGLDIEKQLEQNQAKLKRFIKAYNEFLTLIDKGIKNENDPAFIAIKNNIKELDKEAKLLYAKLSIQENNLQIFKD +1066017

UP..9_1146 +1232 KASDDSNGQFTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1327
K + N + + G F +++ P +++ T G END+YQK+SRQIA QKQTP F+YEEEET+E+EEA++ Q+ +TCIVSDN++TMNPCVVGS+
CPEL_1035 +1066020 K---NNNNKVIVIGKFNTSLINTPNVDKPTQGGGIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIEEAAITQRARTCIVSDNFKTMNPCVVGSY +1066305

UPTC3659_1146 vs: CAQ16704_1466 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3318bp / 1106aa PV: No
Function: hemagglutination domain protein

Score: 953.00 bits: 414.91 e-value: 0.000000
length: 648 gaps: 92 id: 297 positives: 370 coverage: 0.52 query coverage 0.44

UP..9_1146 +22 KLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGILEA +121
KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I GE VNF S +NYLNIAHGTSKSTIAG+L A
CA..4_1466 +1438139 KLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFNGS----NKNYLNIAHGTSKSTIAGLLNA +1438436

UP..9_1146 +122 GNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNKIK +221
NNVFLINPNGVIITKTGTINANRFVAST+S+ + + F G SFSPVFKPN K GNVVNMGNI A N+TLQGNKV+L ++ N
CA..4_1466 +1437839 NGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPN-KLGNVVNMGNIKADNITLQGNKVVLGSE-------NYNN +1438136

UP..9_1146 +222 LNQITADSIDLKGNEVYVDISTINS---KNLTTDAK-KGIAYLSATGYYYNPTRKYNDIIFT-TKGVMDKTYNQYISIGSDLDWWHFAKGWNE-KDDFRN +321
+N++ A I L+GNEVYVD+++I+ + L DAK KG AYL A GYYYNP Y +F+ G + + Y+ IGSD+DWWHFAKGWNE K FR
CA..4_1466 +1437539 INKVMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKGNAYLNANGYYYNP---YSFSVFSKISGNNNFKKDAYVGIGSDVDWWHFAKGWNENKAGFRT +1437836

UP..9_1146 +322 NVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFGKADGANFANINV +421
++LT DIDF +NYANY ID G T MIVG+ F KTFDGQG+TLKNINIDTT NNS Y+G+FG D A N+NV
CA..4_1466 +1437239 SA--SEYRLTKDIDFGGNNNKNYANYCIDGLG--------CTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTT----NNS--YVGIFGVIDNATLKNLNV +1437536

UP..9_1146 +422 DYKNGGINASND----YVGGFIGLI-DKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiynTGEESFTGGFAGWIKQD-PYFE +521
DY G I A ND Y GG G+I + + + NI +I+ K A +GGF+G + + G+ + G K D F+
CA..4_1466 +1436939 DYNQGSIIAKNDDKIIYAGGVAGVIMNTSKVENVNLKNINKIDARSKTHIAYIGGFSGIV--------VDWAGDLDKYYGKNCYEDGTC---KIDGSSFK +1437236

UP..9_1146 +522 QIIINNIDSIKSESDIINLPTVSSGGFAG--WI-------SGGKYNNIAVMDVDEIIA-ISTHHGTSGGFAGWI-----------RGGKYNNIAVMGVDE +621
I + NI+SI D+ + GGF G W+ G +NNI + ++ I A T+ +GGFAG I R Y+NI + G D+
CA..4_1466 +1436639 NIKVSNINSIYGSGDLAYI-----GGFTGTVWVGNYNYTHNGNVFNNIILQNIKNISAHTKTQRARAGGFAGMITNDTQIGFVGDRIDTYDNIVISGTDK +1436936

UP..9_1146 +622 IIAHRFDSLED------YGGKLLAGGFAG-EISRGEFNKISIKDITNI +669
I A + +D + +AGGFA + + FN I + DI NI
CA..4_1466 +1436339 IEAINEGTYDDPDFPGLFNDDSMAGGFAAYALGQNNFNNIVLNDIKNI +1436480

Score: 124.00 bits: 57.31 e-value: 0.000000
length: 252 gaps: 65 id: 77 positives: 99 coverage: 0.52 query coverage 0.44

UP..9_1146 +663 AGGFAGRI-SGSKFENISINDVKNISSTTSA-----GGFAG-----------YLGN------------SDFSFITLNNIENITANNKSRRESVYSGGFAG +762
AGG AG I SK EN+ + ++ I + + GGF+G Y G S F I + NI I + Y GGF G
CA..4_1466 +1436981 AGGVAGVIMNTSKVENVNLKNINKIDARSKTHIAYIGGFSGIVVDWAGDLDKYYGKNCYEDGTCKIDGSSFKNIKVSNINSIYG----SGDLAYIGGFTG +1437278

UP..9_1146 +763 EIYNGK---------FNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRI--DGRI---------FENISIYDVKNIHAINNAQYHGSDIENGGNSG +862
++ G FNNI L I+NI S++T ++ AGGFAG I D +I ++NI I I AIN Y D N
CA..4_1466 +1436681 TVWVGNYNYTHNGNVFNNIILQNIKNI-SAHTK-------TQRARAGGFAGMITNDTQIGFVGDRIDTYDNIVISGTDKIEAINEGTYDDPDFPGLFNDD +1436978

UP..9_1146 +863 SHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRIS +914
S AGGFA Y + FNNI + N S+ K YA F G S
CA..4_1466 +1436381 SMAGGFAAY----ALGQNNFNNIVLNDIKNIHSNSKNKAESSYAAGFIGYSS +1436534

Score: 394.00 bits: 173.77 e-value: 0.000000
length: 690 gaps: 107 id: 200 positives: 313 coverage: 0.52 query coverage 0.44

UP..9_1146 +669 RISGSKFENISINDVKNISST---TSAGGFAG--YLGNSDFSF-------ITLNNIENITANNKSRRESVYSGGFAGEIYNGK-----------FNNISL +768
+I GS F+NI + ++ I + GGF G ++GN +++ I L NI+NI+A K++R +GGFAG I N ++NI +
CA..4_1466 +1436789 KIDGSSFKNIKVSNINSIYGSGDLAYIGGFTGTVWVGNYNYTHNGNVFNNIILQNIKNISAHTKTQRAR--AGGFAGMITNDTQIGFVGDRIDTYDNIVI +1437086

UP..9_1146 +769 NHIQNIES----SYTPENEDEWFAKQVYAGGFAGRIDGRI-FENISIYDVKNIHA---------------------INNAQYH-------GSDIENGGNS +868
IE+ +Y + F AGGFA G+ F NI + D+KNIH+ +AQY GS I +G S
CA..4_1466 +1436489 SGTDKIEAINEGTYDDPDFPGLFNDDSMAGGFAAYALGQNNFNNIVLNDIKNIHSNSKNKAESSYAAGFIGYSSGFTRDAQYSNIILNKMGSIIADG--S +1436786

UP..9_1146 +869 GSHAGGF---AGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGNEIQLHPYDDNN +968
G GG AG+I D+ + F NIY++ + I+++ G + A+ IHIY+ + +++ ++ H Y +
CA..4_1466 +1436189 GYWLGGTTRAAGFIGIDQENET-FKNIYIFMNDSAKIQAKDDPSGGSNRAVTGFFHAAKKADSTYNNIHIYYKNGSINQSSSVANI--TDLTKHEYSNET +1436486

UP..9_1146 +969 QGYIDFKTAALAAL-NGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVN +1068
GY FK+ + GL + FT+DF + I +P +P+I I NEQA LD DD+IS + +E II D+ Y +N
CA..4_1466 +1435889 SGYGSFKSDIQSKFGSGLHQ-----DGDSFTFTTDFTI----IQTP-----------VYLPDINSIKNEQAQLDNDDLISNDIWDEYIIKDIDKVNYKIN +1436186

UP..9_1146 +1069 INILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDA-KVLYEANQNRSKNKYEEIDGKNKAVM +1168
+ +L +LLK Y I + +F+ YL + A +++QSL FL AY+ N T D++ K +E N + NK +
CA..4_1466 +1435589 MRLLAKLLKEYPGIASKTENEQVKFMTSYLGVNETD---------ARALLQSLSFLNAYKDNTTTGVNFKDNSVKTKFETSFNNAGNKVNVFNTNKNLWH +1435886

UP..9_1146 +1169 NFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIK +1268
N + N+ KD + +QLLA Q +LD A+KAY+ +V LI +G+K + D AF +K+N+ L E++ L +S + L +D + + + ++
CA..4_1466 +1435289 NKLITLYNDTVKDGLLIEEQLLANQNKLDQAIKAYDNFVMLIKKGLKNENDPAFIIIKDNITKLNKEAKELYANLSVYKKDL---KDFKTANNTTKVSVV +1435586

UP..9_1146 +1269 GAFANAILINPKLNEITNDSGNEND----EYQKIS---RQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1358
G F + +L+ P +N+ G+ D + K Q A L EE E +EVEE ++ QKGK CIVSDN++TMNPC+V SF
CA..4_1466 +1434989 GNFKDMLLVVPDVNKPISGGGDGEDPNKPDLPKTDLDFEQTASLNLIGDNTLEEESEKQEVEETALMQKGKICIVSDNFKTMNPCIVRSF +1435256

UPTC3659_1146 vs: CAQ16704_1181 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3141bp / 1047aa PV: No
Function: hemagglutination domain protein

Score: 814.00 bits: 354.95 e-value: 0.000000
length: 729 gaps: 125 id: 313 positives: 384 coverage: 0.62 query coverage 0.50

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGIL +119
KL+ +I+LS I SLLFS ALPSGGKFTHGT+GSI ING MNI G K S+IQWGGGF I GE VNFG S +NYLNIAHGTSKSTIAG+L
CA..4_1181 +1152503 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGSININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGSN----KNYLNIAHGTSKSTIAGLL +1152800

UP..9_1146 +120 EAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFK----AQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNKI +219
A NNVFLINPNGVIITKTGTINANRFV ST+SL + FK +FSPVFKPN K GNVVNMGNINA V L GNKV +
CA..4_1181 +1152203 NANGNNVFLINPNGVIITKTGTINANRFVVSTSSLNNADYTTFKNLTYENAHTFSPVFKPN-KLGNVVNMGNINADKVLLIGNKVDIQGG---------- +1152500

UP..9_1146 +220 KLNQITADSIDLKGNEVYVDI------STINSKNLTTD-AKKGIAYLSATGYYY-NPTRKYNDIIFTTKGVMDKTYNQY---ISIGS-------DLDWWH +319
KL + + + L GN VY+D STIN + ++ + + Y + N T N T G N + ++IG +W +
CA..4_1181 +1151903 KLGNVNS-TTHLVGNNVYIDADSANLNSTINVTAIQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFY +1152200

UP..9_1146 +320 FAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSGQ--------NYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNN +419
FAKGWNE V D F+L ++DF GQ NYANY LNG G T MIV ++FAKTFDGQG+TLKNINIDTT LS N
CA..4_1181 +1151603 FAKGWNEYIGDTQSV--DEFRLVGNVDFSGNKGQGVEGRDWQNYANYC--LNGLG------CTSMIV-----TSFAKTFDGQGYTLKNINIDTTSLS--N +1151900

UP..9_1146 +420 SKNYIGLFGKADGANFANINVDYKNGGINAS-NDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiynTGEES +519
+ +G+FG + A NINVDY GGI A +YVGGF G IY S +NN + T G NGG
CA..4_1181 +1151303 KPDNVGIFGSTNNATIKNINVDYMGGGIRANGGNYVGGFAGQ----IYGSNLAISNISLNNIGSIST------IGNDNGG-------------------- +1151600

UP..9_1146 +520 FTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAIST--HHGTSGGFAGWIRGGKYNNIAVMGVDEIIA +619
GGFAG F I +NNI SI S + + + +GGFAG G Y NI++ ++ I + S+ +GGFAG G + NI++ + I
CA..4_1181 +1151003 LAGGFAGRADSGT-FSNISLNNIGSISSRG-VYDHDFIIAGGFAGRTDSGTYTNISLNNIGNISSNSSGLDGDFAGGFAGQATDGTFSNISLSNIGNI-- +1151300

UP..9_1146 +620 HRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSV-----------GSAGGFAGRISGSKF +719
S GGFAG+ S G F IS+ +I NISS + AGGFAG+A F NIS+N++ +ISS AGGFAG SG+ F
CA..4_1181 +1150703 ----STSGANWNNYVGGFAGQAS-GTFSNISLNNIGNISSRGNDISFAGGFAGDAGGT-FSNISLNNIGDISSSGGNGGNGEFGRSQAGGFAGEASGT-F +1151000

UP..9_1146 +720 ENISINDVKNISSTTS-------AGGFAG +748
NIS+N++ NIS+++ AGGFAG
CA..4_1181 +1150403 TNISLNNIGNISTSSRGNGNYIYAGGFAG +1150487

Score: 673.00 bits: 294.12 e-value: 0.000000
length: 782 gaps: 161 id: 279 positives: 363 coverage: 0.62 query coverage 0.50

UP..9_1146 +529 GGFAGWISGGKY--NNIAVMDVDEIIAISTHHG-TSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIs +628
GGFAG I G NI++ ++ I I G +GGFAG G + NI++ + I + R D+ ++AGGFAG G +
CA..4_1181 +1151294 GGFAGQIYGSNLAISNISLNNIGSISTIGNDNGGLAGGFAGRADSGTFSNISLNNIGSI-SSRGVYDHDF---IIAGGFAGRTDSGTY------------ +1151591

UP..9_1146 +629 snfsssasaggfageasdgNFENISINDVKNISSVGS------AGGFAGRISGSKFENISINDVKNISSTTS-----AGGFAGYLGNSDFSFITLNNIEN +728
NIS+N++ NISS S AGGFAG+ + F NIS+ ++ NIS++ + GGFAG + FS I+LNNI N
CA..4_1181 +1150994 ---------------------TNISLNNIGNISSNSSGLDGDFAGGFAGQATDGTFSNISLSNIGNISTSGANWNNYVGGFAGQASGT-FSNISLNNIGN +1151291

UP..9_1146 +729 ITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGS +828
I+ SR + G G F NISLN I +I SS E Q AGGFAG G F NIS+ ++ NI S G
CA..4_1181 +1150694 IS----SRGNDISFAGGFAGDAGGTFSNISLNNIGDISSSGGNGGNGEFGRSQ--AGGFAGEASGT-FTNISLNNIGNI----------STSSRGNGNYI +1150991

UP..9_1146 +829 HAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGN---EIQLHPYDDNNQG +928
+AGGFAG + S F NIY++F PN I S S N NYAGKF G+ + NPD IHIYHH DLTNAT DQ YWGN +IQ+H Y D NQ
CA..4_1181 +1150394 YAGGFAG----EADSDSIFKNIYVFFNPNMSI-SASGGNYNYAGKFFGKGYFTG-TNPD--NIHIYHHTNDLTNATYDQNYWGNTNDKIQIHTYTDKNQA +1150691

UP..9_1146 +929 YIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINI +1028
Y N K+ D R + P IT P P P D+I L +DD+IS NDL
CA..4_1181 +1150094 Y-----------NQFKQQDNTIARPIVQL--------PSITPP---------SNPSTPTNPDVI-----LGSDDVISANDLNTW---------------- +1150391

UP..9_1146 +1029 LDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLT---DDAKVLYEANQNRSKNKYEEIDGKNKAVMN +1128
L E+L ID ++ +S I+ + QS+ FL A K L +D K Y Q + NK ++
CA..4_1181 +1149794 LGEILAGNYWIDINDLSSIK--------------------GISEELKQSISFLEALYGQEGMKEILEGFGNDYKTNYRNYQRFATNKAN--------LLA +1150091

UP..9_1146 +1129 FIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKG +1228
FI + L K S L Q++L +A+ YN YV +N K D+ +LK ++ L S+ L +I NQ +L WQ K S DSN +F IKG
CA..4_1181 +1149494 FINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKG +1149791

UP..9_1146 +1229 AFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1310
F N L+ P L+E+ + GNEN++Y+K+SRQ+AN QKQTP FEYEE E EEVEE ++ QKGK CIVSDN++TMNPCV GSF
CA..4_1181 +1149194 EFKNLALLTPNLDEVIVN-GNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +1149437

Score: 116.00 bits: 53.85 e-value: 0.000000
length: 153 gaps: 26 id: 54 positives: 70 coverage: 0.62 query coverage 0.50

UP..9_1146 +727 YSGGFAGEIY--NGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYIN +826
Y GGFAG+IY N NISLN I I T N++ AGGFAGR D F NIS+ NI +I + D AGGFAG +
CA..4_1181 +1151300 YVGGFAGQIYGSNLAISNISLNNIGSIS---TIGNDNGGL-----AGGFAGRADSGTFSNISL---NNIGSISSRGVYDHDF-------IIAGGFAGRTD +1151597

UP..9_1146 +827 YDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKI +879
++ NNI I S L+ ++AG FAG+ + +N +S I
CA..4_1181 +1151000 SGTYTNISLNNI------GNISSNSSGLDGDFAGGFAGQATDGTFSNISLSNI +1151156

UPTC3659_1146 vs: CAQ16704_1534 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3192bp / 1064aa PV: No
Function: hemagglutination domain protein

Score: 791.00 bits: 345.03 e-value: 0.000000
length: 757 gaps: 144 id: 303 positives: 375 coverage: 0.51 query coverage 0.42

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGIL +119
KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I GE VNFG S +NYLNIAHGTSKSTIAG+L
CA..4_1534 +1508159 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGS----NKNYLNIAHGTSKSTIAGLL +1508456

UP..9_1146 +120 EAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNK +219
A NNVFLINPNGVIITKTGTINANRFVAST+S+ + F G SFSPVFKPN K GNVVNMGNINA V L GNKV +
CA..4_1534 +1508459 NANGNNVFLINPNGVIITKTGTINANRFVASTSSMDNTTMQNFANMNNFNDGLSFSPVFKPN-KLGNVVNMGNINANKVLLIGNKVDIQGG--------- +1508756

UP..9_1146 +220 IKLNQITADSIDLKGNEVYVDIST--INSKNLTTDAKKGIAYLSATGY------YYNPTRKYNDIIFTTKGVMDKTYNQY---ISIG-------SDLDWW +319
KL + + L GN VY+D + +NS T + G + + N T N T G N + ++IG +W
CA..4_1534 +1508759 -KLGNANS-TTHLVGNNVYIDADSANLNSTINVTATQNGYIQRQMNKFANDNYNFGNNTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWF +1509056

UP..9_1146 +320 HFAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSG--------QNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDN +419
+FAKGWNE V D F+L ++DF G QNYANY + A TNMIVGF D + F KTFDGQG+TLKNINID TKLSD
CA..4_1534 +1509059 YFAKGWNENRGDTQSV--DEFRLVGNVDFSGNKGQGVEGRDWQNYANYCL--------SAGNCTNMIVGFSDKTIFTKTFDGQGYTLKNINIDITKLSD- +1509356

UP..9_1146 +420 NSKNYIGLFGKADGANFANINVDYKNGGI--NASNDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiynTGE +519
YIGLFG NINVDY GGI + Y+GGF G D G + I++ N G INGG
CA..4_1534 +1509359 -ELRYIGLFGAVRDT-IKNINVDYMGGGIKTDIKHFYIGGFAGYTDYGTLTNISLKN------------------IGSINGG------------------ +1509656

UP..9_1146 +520 ESFTGGFAGWIKQDPYFEQIIINNIDSIKSES-----------------DIINLPTVSS----GGFAGWISGGKYNNIAVMDVDEIIAISTHHGT-SGGF +619
+TGGF G I ++NI I S+ + N+ +SS GGFAG + G + +I++ + I + G+ GGF
CA..4_1534 +1509659 -HYTGGFIGGTHYKGNLSNISLDNIGDISSKNGSAGGFAGSAGGTYSNISLNNIGNISSYSKAGGFAGHVERGIFTDISLNHIGNITSKNNGTGSYVGGF +1509956

UP..9_1146 +620 AGWI--------RGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKN +719
AG++ + NI++ + ++ + + +GGFAG I G F IS+ +I NI S ++ GGFAG+ GNF NISIND+
CA..4_1534 +1509959 AGYVNAWYDDGLEANIFTNISLNNIGDMSSRASNYTR-------SGGFAGWIRIGTFSNISLNNIGNI-YSGSDNSATGGFAGQIGRGNFTNISINDLGK +1510256

UP..9_1146 +720 IS--SVGSAGGFAGRISGSKFENISINDVKNIS---STTSAGGFAGY--LGNSDFSF +776
I+ GGF G I F+NI I N+S + AG F GY GN SF
CA..4_1534 +1510259 ITGDPRWPFGGFVGDIDYGTFKNIYIYFNPNMSIGEYSKLAGLFFGYGISGNGHVSF +1510427

Score: 459.00 bits: 201.81 e-value: 0.000000
length: 769 gaps: 141 id: 241 positives: 330 coverage: 0.51 query coverage 0.42

UP..9_1146 +552 IAISTHHGTSGGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISI +651
I H GGFAG+ G NI++ + I GG G G +G IS+ +I +ISS S+ G AG + NIS+
CA..4_1534 +1509356 IKTDIKHFYIGGFAGYTDYGTLTNISLKNIGSI----------NGGHYTGGFIGGTHYKGNLSNISLDNIGDISSKNGSAGGFAGSAGGT----YSNISL +1509653

UP..9_1146 +652 NDVKNISSVGSAGGFAGRISGSKFENISINDVKNISST-----TSAGGFAGY--------LGNSDFSFITLNNIENITANNKSRRESVY--SGGFAGEIY +751
N++ NISS AGGFAG + F +IS+N + NI+S + GGFAGY L F+ I+LNNI ++ S R S Y SGGFAG I
CA..4_1534 +1509656 NNIGNISSYSKAGGFAGHVERGIFTDISLNHIGNITSKNNGTGSYVGGFAGYVNAWYDDGLEANIFTNISLNNIGDM-----SSRASNYTRSGGFAGWIR +1509953

UP..9_1146 +752 NGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPKFNNI +851
G F NISLN I NI S + GGFAG+I F NISI D+ I G+ GGF G I+Y F NI
CA..4_1534 +1509956 IGTFSNISLNNIGNIYSG----------SDNSATGGFAGQIGRGNFTNISINDLGKIT---------------GDPRWPFGGFVGDIDYGT-----FKNI +1510253

UP..9_1146 +852 YMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGN---------EIQLHPYDDNNQG--YIDFKTAALAALNG +951
Y+YF PN I SKL AG F G +S N +HIYH +L NA DQK+W + +I +H Y D Q Y DF + A
CA..4_1534 +1510256 YIYFNPNMSIGEYSKL----AGLFFGY-GISGNGHVSFDNVHIYHKYGELANANKDQKHWNDFNQNGYKQDKINIHTYTDETQESFYQDFLSKANT---- +1510553

UP..9_1146 +952 LKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLKAYSKIDKD +1051
++ PNIT P KP P ++I L +DD+ S + + E II +++++ Y + I L L+ + + K+
CA..4_1534 +1510556 --------------------IEKPNITPP---------SKPTNPTDSEVI-----LGSDDLYS-DIIMEWIINEIRNEKYTISIEKLVGLINVFKGLSKN +1510853

UP..9_1146 +1052 NPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEKTkdskdll +1151
+S+ E A D DDK A SM Q + FLL Y+ N K +L ++A V Y EI + ++ KN+L ++ D +
CA..4_1534 +1510856 --SSEDEIKAIVKTHLDIKDDDK-----ALSMAQGISFLLNYKEHNFDK-RLNNEALVTYNGIIRPNVSNTLEI----ISYLDKNKNELQKQYDDYLQIK +1511153

UP..9_1146 +1152 kqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFAN------AILINPK +1251
+ A +N +DL+N+G D F +N + L+ I+ + +D NG +FA LI P+
CA..4_1534 +1511156 DNFNKAYQAYKNAEAEFNKLLDLVNKGELKYNDPKFTQAFDNWTKAYNDYNALSNDITKLNDNVLNIASAITDKDNGLGYTNFSFAKFDDITKIDLIKPE +1511453

UP..9_1146 +1252 LNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVG +1320
L +I N G + + Q A L +++E EEVEEASM QK TCIVSDNY+TMNPCVVG
CA..4_1534 +1511456 LPDIDNSQGGD----LPVFEQTASLNLIGDNALEDDDEKEEVEEASMKQKSITCIVSDNYKTMNPCVVG +1511660

UPTC3659_1146 vs: CAQ16704_1535 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3009bp / 1003aa PV: No
Function: hemagglutination domain protein

Score: 926.00 bits: 403.26 e-value: 0.000000
length: 647 gaps: 77 id: 306 positives: 367 coverage: 0.66 query coverage 0.51

UP..9_1146 +15 DLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKST +114
++T KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I GE VNFG S +NYLNIAHGTSKST
CA..4_1535 +1511338 NVTMKTTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGS----NKNYLNIAHGTSKST +1511635

UP..9_1146 +115 IAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWD +214
IAG+L A NNVFLINPNGVIITKTGTINANRFVAST+S+ + F G SFSPVFKPN K GNVVNMGNINA V L GNKV+L +S +
CA..4_1535 +1511638 IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDNTTMQNFANMNNFNDGLSFSPVFKPN-KLGNVVNMGNINANKVLLIGNKVLL--QSSFN +1511935

UP..9_1146 +215 KKNNKIKLNQITADSIDLKGNEVYVDISTINSKN-LTTDAK-KGIAYLSATGYYYNP----------TRKYNDIIFTTKGVMDKTYNQYISIGSDLDWWH +314
KN NQI A I L GNE++ DI+T+ N L AK KG YL ATGYYYNP ++ YN I + +Y+ IGSD+DWWH
CA..4_1535 +1511938 TKNK--TFNQIKASNIHLVGNEIHADIATLKDINKLYITAKDKGSLYLNATGYYYNPSSFSHFNNYESKAYNGINHNNTNFSNM---RYVGIGSDVDWWH +1512235

UP..9_1146 +315 FAKGWNE-KDDFRNNVVGDTFKLTNDIDFKASSG--------QNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDN +414
FAKGWNE K FR +KLTNDIDFK G QNYANY + T MIVGF + AF KTFDGQG+TLKNINID T LS
CA..4_1535 +1512238 FAKGWNENKAGFR--TSASEYKLTNDIDFKGNKGQGVEGRDWQNYANYCL--------STYNCTSMIVGFSN--AFNKTFDGQGYTLKNINIDITSLS-- +1512535

UP..9_1146 +415 NSKNYIGLFGKADGANFANINVDYKNGGINASN--DY--VGGFIGLIDKGIYSSITinn-ikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiyn +514
N Y+G+FG GA F NINVDY GGI A + DY VGGF+G G +S I++NN VGGFAG + TF NIS+N I I
CA..4_1535 +1512538 NKPEYVGIFGSIYGATFKNINVDYMGGGIKANDVGDYFRVGGFVGWAYGGTHSNISLNNIGNISTSGGGYGRIYVGGFAGYVERETFSNISLNNIGDISS +1512835

UP..9_1146 +515 TGEESFTGGFAGWIKQDPY--FEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGT-SGGFAGWIRGGKYNNIAVMG +614
+G S + G F I +NNI I S + +GG Y NI++ ++ I A + + +GGFAG + G + NI++
CA..4_1535 +1512838 SGISSSSASAGGFAGGAIRGTFSNISLNNIGNISSSGSSASAGGFAG------SAGGTYSNISLNNIGNISASGGYNDSQAGGFAGVVL-GTFSNISLNN +1513135

UP..9_1146 +615 VDEIIA---HRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNI +661
+ I + R+ + AGGFAG G F IS+ +I NI
CA..4_1535 +1513138 IGNISSSGGSRYTRSQ-------AGGFAGNAGYGTFSNISLNNIGNI +1513276

Score: 277.00 bits: 123.30 e-value: 0.000000
length: 367 gaps: 71 id: 135 positives: 179 coverage: 0.66 query coverage 0.51

UP..9_1146 +562 GGFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgN--FENISINDVKNISS +661
GGF GW GG + NI++ + I S YG ++ GGFAG + R F IS+ +I +ISS SS+SA F NIS+N++ NISS
CA..4_1535 +1512580 GGFVGWAYGGTHSNISLNNIGNIST----SGGGYG-RIYVGGFAGYVERETFSNISLNNIGDISSSGISSSSASAGGFAGGAIRGTFSNISLNNIGNISS +1512877

UP..9_1146 +662 VGSAGGFAGRISGS--KFENISINDVKNISSTTSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTP +761
GS+ G + + NIS+N++ NIS+ +GG+ N S+ +GGFAG + G F NISLN I NI SS
CA..4_1535 +1512880 SGSSASAGGFAGSAGGTYSNISLNNIGNISA---SGGY-----------------------NDSQ-----AGGFAGVVL-GTFSNISLNNIGNISSS--- +1513177

UP..9_1146 +762 ENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYA +861
+ Q AGGFAG F NIS+ ++ NI A ++N S A GFAG I + F NIY++F PN I + +NY
CA..4_1535 +1513180 -GGSRYTRSQ--AGGFAGNAGYGTFSNISLNNIGNISA---------SVDNNFVS---AAGFAGIITVN----STFKNIYIFFNPNMSISASGNW-QNYI +1513477

UP..9_1146 +862 GKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWG---NEIQLHPYDDNNQG--YIDFKTAA +928
GKF G I S N D +HIYHH DL NAT DQ YWG ++IQ+H Y++ NQ Y DF + A
CA..4_1535 +1513480 GKFFGYINGSPNLTFD--NVHIYHHTNDLANATYDQNYWGSSNDKIQIHTYNNSNQENVYQDFLSKA +1513678

Score: 389.00 bits: 171.62 e-value: 0.000000
length: 682 gaps: 119 id: 219 positives: 304 coverage: 0.66 query coverage 0.51

UP..9_1146 +649 ISINDVKNISSVGSAGGFAGRISGSKFENISINDVKNISSTTS------AGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNN +748
I NDV + VG GF G G NIS+N++ NIS++ GGFAGY+ FS I+LNNI +I++ S + G AG G F N
CA..4_1535 +1512544 IKANDVGDYFRVG---GFVGWAYGGTHSNISLNNIGNISTSGGGYGRIYVGGFAGYVERETFSNISLNNIGDISSSGISSSSASAGGF-AGGAIRGTFSN +1512841

UP..9_1146 +749 ISLNHIQNIE-------------------SSYTPENEDEWFAKQVY----AGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGF +848
ISLN I NI S + N A Y AGGFAG + G F NIS+ ++ NI + ++Y + S+AGGF
CA..4_1535 +1512844 ISLNNIGNISSSGSSASAGGFAGSAGGTYSNISLNNIGNISASGGYNDSQAGGFAGVVLGT-FSNISLNNIGNISSSGGSRY----------TRSQAGGF +1513141

UP..9_1146 +849 AGYINYDKHSKPKFNNIYMYFTPNSIIKSESKLNENY--AGKFAGRISVSNNANPDISKIHIYHHKKDLTNATAD-QKYWGN---EIQLHPYDDNNQGYI +948
AG Y S NN I + ++ N+ A FAG I+V N I+I+ A+ + Q Y G I P + +I
CA..4_1535 +1513144 AGNAGYGTFSNISLNN---------IGNISASVDNNFVSAAGFAGIITV----NSTFKNIYIFFNPNMSISASGNWQNYIGKFFGYINGSPNLTFDNVHI +1513441

UP..9_1146 +949 DFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFN--AKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINI +1048
T LA + + K + T + + N+ + N ++ P P D+I L +DD+IS NDL
CA..4_1535 +1513444 YHHTNDLANATYDQNYWGSSNDKIQIHTYN-NSNQENVYQDFLSKANTISRPTPPTNPSNPDVI-----LGSDDVISANDLNTW---------------- +1513741

UP..9_1146 +1049 LDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKL---TDDAKVLYEANQNRSKNKYEEIDGKNKAVMN +1148
L E+L ID ++ +S I+ + QS+ FL A K L ++D K+ Y Q + NK ++
CA..4_1535 +1513744 LGEILAGNYWIDINDLSSIK--------------------GISEELKQSISFLEALYGQEGMKEILEGFSNDYKINYRNYQRFATNK--------ANLLA +1514041

UP..9_1146 +1149 FIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKG +1248
FI + L K S L Q++L +A+ YN YV +N K D+ +LK ++ L S+ L +I NQ +L WQ K S DSN +F IKG
CA..4_1535 +1514044 FINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKG +1514341

UP..9_1146 +1249 AFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1330
F N L+ P L+E+ + GNEN++Y+K+SRQ+AN QKQTP FEYEE E EEVEE ++ QKGK CIVSDN++TMNPCV GSF
CA..4_1535 +1514344 EFKNLALLTPNLDEVIVN-GNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +1514587

UPTC3659_1146 vs: CAQ16704_1158 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3396bp / 1132aa PV: No
Function: hemagglutination domain protein

Score: 971.00 bits: 422.67 e-value: 0.000000
length: 778 gaps: 139 id: 319 positives: 412 coverage: 0.59 query coverage 0.52

UP..9_1146 +22 KLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGILEA +121
KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I GE VNFG S +NYLNIAHGTSKSTIAG+L A
CA..4_1158 +1126702 KLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGS----NKNYLNIAHGTSKSTIAGLLNA +1126999

UP..9_1146 +122 GNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNKIK +221
NNVFLINPNGVIITKTGTINANRFVAST+S+ + + F G SFSPVFKPN K GNVVNMGNINA N+TLQGNKV+L ++ N
CA..4_1158 +1126402 NGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPN-KLGNVVNMGNINANNITLQGNKVVLGSE-------NYNN +1126699

UP..9_1146 +222 LNQITADSIDLKGNEVYVDISTINS---KNLTTDAK-KGIAYLSATGYYYNPTRKYNDIIFT-TKGVMDKTYNQYISIGSDLDWWHFAKGWNE-KDDFRN +321
+N++ A I L+GNEVYVD+++I+ + L DAK KG AYL A GYYYNP Y +F+ G + + Y+ IGSD+DWWHFAKGWNE K FR
CA..4_1158 +1126102 INKVMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKGNAYLNANGYYYNP---YSFSVFSKISGNNNFKKDAYVGIGSDVDWWHFAKGWNENKTGFR- +1126399

UP..9_1146 +322 NVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFK---------DNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLFGKAD +421
++LT DIDF +NYANYWIDLNGDG+KQ NE+TNMIVG + D AF K FDGQG+TLKNINI + N Y+G+FG
CA..4_1158 +1125802 -TSASEYRLTKDIDFGGNNNKNYANYWIDLNGDGQKQDNEYTNMIVGNQYDLQYGNPVDIGAFNKIFDGQGYTLKNINIKGS-----NDDMYLGIFGVIS +1126099

UP..9_1146 +422 GANFANINVDYKNGGINASND----YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTFCnisinkinkiynTGEESFTGGFAGWI +521
N NVDY+NG + D + GG +G++ G SS + + +N K + T GG+A GGFAG I
CA..4_1158 +1125502 NGTLKNFNVDYENGSVIGNSDKGSVFAGGIVGIMLGG--SSASHITLSNVNEIKAISTVD-GGYAR--------------------------AGGFAGGI +1125799

UP..9_1146 +522 KQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIRGGKYN-NIAVMGVDEIIAHRFDSLEDYG +621
ID+++ N +S + +IS +NI + ++++I + ++ SGGF G I G YN N D I+ +E +
CA..4_1158 +1125202 -------------IDTLEWSR---NCGNDASNPYC-YISASTLDNIYLKNINKIYSQASSVAHSGGFTGEIWTGNYNYNKIGNSFDNIVLNNIINIEAFA +1125499

UP..9_1146 +622 GKLLA--GGFAGEISRGEFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISS-----------------VGSAGGFAGRISGSKFEN +721
K A GGF G +N + +K G + NI +N++K I + + A GFAGR++ S N
CA..4_1158 +1124902 HKRFAYSGGFVGH----AYNDLQLKQ-------------EGETGDNIRRDSYSNIVLNNIKLIKAYNNGEFNNEESWFGENDLSYAAGFAGRMTTSDLSN +1125199

UP..9_1146 +722 ISINDVKNISSTTS-------AGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYN---GKFNNISL +799
I +N++ I + + A GF +S + I +NN+ I A + G AG + N FNNI +
CA..4_1158 +1124602 IVLNNIGKINAIATNKSEFSYAAGFVSVSRDSRYFNIIMNNMGSIIAEGSTTYHPDQLTGAAGFVVNTNRNSFNNIYM +1124833

Score: 112.00 bits: 52.13 e-value: 0.000000
length: 301 gaps: 45 id: 82 positives: 120 coverage: 0.59 query coverage 0.52

UP..9_1146 +525 TVSSGGFAGWISGGK-YNNIAVMDVDEIIAISTHHG---TSGGFAG-------WIR------GGKYNNIAVMGVDEIIAHRFDSLEDYGGKLL-AGGFAG +624
+V +GG G + GG I + +V+EI AIST G +GGFAG W R Y I+ +D I + + + +GGF G
CA..4_1158 +1125499 SVFAGGIVGIMLGGSSASHITLSNVNEIKAISTVDGGYARAGGFAGGIIDTLEWSRNCGNDASNPYCYISASTLDNIYLKNINKIYSQASSVAHSGGFTG +1125796

UP..9_1146 +625 EISRGEFNKISIKD-ITNIssnfsssasaggfageasdgNFENISINDVKNISSVGSAGGFAGRISGSKFENISINDVKNISS----------------- +724
EI G +N I + NI N A A G F + ND++ + G I + NI +N++K I +
CA..4_1158 +1125199 EIWTGNYNYNKIGNSFDNIVLNNIINIEAFAHKRFAYSGGFVGHAYNDLQ----LKQEGETGDNIRRDSYSNIVLNNIKLIKAYNNGEFNNEESWFGEND +1125496

UP..9_1146 +725 TTSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVY-AGGFAGRIDGRIFENISI +824
+ A GFAG + SD S I LNNI I A + E Y+ GF + ++ NI +N + I E + Q+ A GF + F NI +
CA..4_1158 +1124899 LSYAAGFAGRMTTSDLSNIVLNNIGKINAIATNKSEFSYAAGFVSVSRDSRYFNIIMNNMGSI----IAEGSTTYHPDQLTGAAGFVVNTNRNSFNNIYM +1125196

UP..9_1146 +825 Y +825
+
CA..4_1158 +1124599 F +1124599

Score: 351.00 bits: 155.22 e-value: 0.000000
length: 732 gaps: 122 id: 208 positives: 323 coverage: 0.59 query coverage 0.52

UP..9_1146 +651 INDVKNISSV----GSAGGFAG---------------------RISGSKFENISINDVKNI----SSTTSAGGFAG--YLGNSDF-----SFITLNNIEN +750
+N++K IS+V AGGFAG IS S +NI + ++ I SS +GGF G + GN ++ SF +
CA..4_1158 +1125427 VNEIKAISTVDGGYARAGGFAGGIIDTLEWSRNCGNDASNPYCYISASTLDNIYLKNINKIYSQASSVAHSGGFTGEIWTGNYNYNKIGNSFDNIVLNNI +1125724

UP..9_1146 +751 ITANNKSRRESVYSGGFAGEIYNG----------------KFNNISLNHIQNIESSYTPE--NEDEWFAKQ--VYAGGFAGRIDGRIFENISIYDVKNIH +850
I + + YSGGF G YN + NI LN I+ I++ E NE+ WF + YA GFAGR+ NI + ++ I
CA..4_1158 +1125127 INIEAFAHKRFAYSGGFVGHAYNDLQLKQEGETGDNIRRDSYSNIVLNNIKLIKAYNNGEFNNEESWFGENDLSYAAGFAGRMTTSDLSNIVLNNIGKIN +1125424

UP..9_1146 +851 AI--NNAQYH----------------------GSDIENGGNS--GSHAGGFAGYI-NYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVS +950
AI N +++ GS I G + + G AG++ N ++ S FNNIYM+F ++ IKS + + Y K G ++S
CA..4_1158 +1124827 AIATNKSEFSYAAGFVSVSRDSRYFNIIMNNMGSIIAEGSTTYHPDQLTGAAGFVVNTNRNS---FNNIYMFFNKDATIKSS--VADYY--KLIGNFTIS +1125124

UP..9_1146 +951 NNANPDISKI-HIYHHKKDLTNATADQKYWGNEIQLHPYDDNNQGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKP +1050
N + ++ + AT++ ++ P D +DF + AA + K D+ + + DF Q
CA..4_1158 +1124527 SNKPQHKNQYKNVFMWAPNNILATSE----ATKVVQMPSD------VDFNLQSYAASQE-QNFYTQFKNKIQEKFQDYGLHQNGDSFTFTTDFTITQIPV +1124824

UP..9_1146 +1051 LIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLA +1150
+P+I I NEQA LD DD+IS + +E II D+ Y +N+ +L +LLK Y I + +F+ YL + A +++QSL FL A
CA..4_1158 +1124227 YLPDINSIKNEQAQLDNDDLISNDIWDEYIIKDIDKVNYKINMRLLAKLLKEYPGIASKTENEQVKFMTSYLGVNETD---------ARALLQSLSFLNA +1124524

UP..9_1146 +1151 YQTNNTGKSKLTDDA-KVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLK +1250
Y+ N T D++ K +E N + NK + N + N+ KD + +QLLA Q +LD A+KAY+ +V LI +G+K + D AF +K
CA..4_1158 +1123927 YKDNTTTGVNFKDNSVKTKFETSFNNAGNKVNVFNTNKNLWHNKLITLYNDTVKDGLLIEEQLLANQNKLDQAIKAYDNFVMLIKKGLKNENDPAFIIIK +1124224

UP..9_1146 +1251 NNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGAFANAILINPKLNEITNDSGNEND----EYQKIS---RQIANLQKQTPIFeyeeeet +1350
+N+ L E++ L +S + L +D + + + ++ G F + +L+ P +N+ G+ D + K Q A L EE E
CA..4_1158 +1123627 DNITKLNKEAKELYANLSVYKKDL---KDFKTANNTTKVSVVGNFKDMLLVVPDVNKPISGGGDGEDPNKPDLPKTDLDFEQTASLNLIGDNTLEEESEK +1123924

UP..9_1146 +1351 eeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1382
+EVEE ++ QKGK CIVSDN++TMNPC+V SF
CA..4_1158 +1123327 QEVEETALMQKGKICIVSDNFKTMNPCIVRSF +1123420

Score: 108.00 bits: 50.40 e-value: 0.000000
length: 220 gaps: 49 id: 64 positives: 91 coverage: 0.59 query coverage 0.52

UP..9_1146 +663 AGGFAG-RISGSKFENIS---INDVKNISST----TSAGGFAGYL-------------GNSDFSFITLNNIENITANN----KSRRESV-YSGGFAGEIY +762
AGG G + GS I+ +N++K IS+ AGGFAG + + +I+ ++NI N S+ SV +SGGF GEI+
CA..4_1158 +1125490 AGGIVGIMLGGSSASHITLSNVNEIKAISTVDGGYARAGGFAGGIIDTLEWSRNCGNDASNPYCYISASTLDNIYLKNINKIYSQASSVAHSGGFTGEIW +1125787

UP..9_1146 +763 NGKFNNISLNHIQNI--ESSYTPENEDEWFAKQ--VYAGGFAGR----------------IDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHA +862
G +N N I N E FA + Y+GGF G I + NI + ++K I A NN ++ + G N S+A
CA..4_1158 +1125190 TGNYN---YNKIGNSFDNIVLNNIINIEAFAHKRFAYSGGFVGHAYNDLQLKQEGETGDNIRRDSYSNIVLNNIKLIKAYNNGEFNNEESWFGENDLSYA +1125487

UP..9_1146 +863 GGFAGYINYDKHSKPKFNNI +882
GFAG + S NNI
CA..4_1158 +1124890 AGFAGRMTTSDLSNIVLNNI +1124947

UPTC3659_1146 vs: CAQ16704_0852 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2979bp / 993aa PV: No
Function: hemagglutination domain protein

Score: 854.00 bits: 372.20 e-value: 0.000000
length: 639 gaps: 81 id: 282 positives: 351 coverage: 0.58 query coverage 0.44

UP..9_1146 +20 CKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTSKSTIAGIL +119
KL+ +I+LS I SLLFS ALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I GE VNFG S +NYLNIAHGTSKSTIAG+L
CA..4_0852 +823467 TTKLTHHIILSGITVSLLFSPLMALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFGGS----NKNYLNIAHGTSKSTIAGLL +823764

UP..9_1146 +120 EAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFK----AQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADTSWDKKNNKI +219
A NNVFLINPNGVIITKTGTINANRFVAST+SL + FK +FSPVFKP K GNVVNMGNINA V L GNKV +
CA..4_0852 +823167 NANGNNVFLINPNGVIITKTGTINANRFVASTSSLNNADYTTFKNLTYENAHTFSPVFKP-SKLGNVVNMGNINADKVLLIGNKVDIQGG---------- +823464

UP..9_1146 +220 KLNQITADSIDLKGNEVYVDI------STINSKNLTTD-AKKGIAYLSATGYYY-NPTRKYNDIIFTTKGVMDKTYNQY---ISIGS-------DLDWWH +319
KL + + L GN VY+D STIN + ++ + + Y + N T N T G N + ++IG +W +
CA..4_0852 +822867 KLGNANS-TTHLVGNNVYIDADSANLNSTINVTAIQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFY +823164

UP..9_1146 +320 FAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLSDNNSKNYIGLF +419
FAKGWNE + V D F+L ++DF GQNYANY + T MIVG+++N F KTFDGQG+TLKNINIDTT L NN ++G+F
CA..4_0852 +822567 FAKGWNENKGYTRSV--DEFRLVGNVDFSGNQGQNYANYCL--------STYNCTSMIVGYQNN-IFTKTFDGQGYTLKNINIDTTSL--NNKPYFVGIF +822864

UP..9_1146 +420 GKADGANFANINVDYKNGGINAS-NDYVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQINGGTF----CnisinkinkiynTGEESFTGG +519
G A F NINVDY GGI +YVGGF G G + I++NNI +I ++ VGGF G + GTF N N + +TGG
CA..4_0852 +822267 GGTRNATFKNINVDYMGGGIKVNGGEYVGGFAGGTLNGTFNNISLNNIGDISS----SSSYVGGFIGYVYDGTFGNISLNNIYSITNIYASSTSNVYTGG +822564

UP..9_1146 +520 FAGWI-KQDPYFEQIIINNIDSI-KSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHG----TSGGFAGWIRGGKYNNIAVMGVDEIIA +619
FAG+ + F I +NNI SI S SD + V +GGFAG G Y NI++ ++ +I + H G ++GGF GW G Y NI++ + +I
CA..4_0852 +821967 FAGYAGSTNGTFYNISLNNIGSISNSASDSV--FYVYTGGFAGRTDSGTYTNISLNNIGDIYS---HNGSQISSTGGFTGWAN-GTYTNISLNNIGDI-- +822264

UP..9_1146 +620 HRFDSLEDYG-GKLLAGGFAGEISRGEFNKISIKDITNI +658
+YG + GFAG I G F IS+ +I NI
CA..4_0852 +821667 ------SNYGSASHHSSGFAGSIGYGSFTNISLNNIGNI +821781

Score: 558.00 bits: 244.52 e-value: 0.000000
length: 681 gaps: 142 id: 230 positives: 308 coverage: 0.58 query coverage 0.44

UP..9_1146 +663 AGGFAGRISGSKFENISINDVKNISSTTS-AGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEI--YNGKFNNISLNHIQNIESSYTPEN +762
GGFAG F NIS+N++ +ISS++S GGF GY+ + F I+LNNI IT S VY+GGFAG NG F NISLN I I S +
CA..4_0852 +822273 VGGFAGGTLNGTFNNISLNNIGDISSSSSYVGGFIGYVYDGTFGNISLNNIYSITNIYASSTSNVYTGGFAGYAGSTNGTFYNISLNNIGSISNSAS--- +822570

UP..9_1146 +763 EDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGS--------------------DIENGGNSGSHAGGFAGYINYDKHSK--------- +862
D F VY GGFAGR D + NIS+ ++ +I++ N +Q + DI N G + H+ GFAG I Y +
CA..4_0852 +821973 -DSVF--YVYTGGFAGRTDSGTYTNISLNNIGDIYSHNGSQISSTGGFTGWANGTYTNISLNNIGDISNYGSASHHSSGFAGSIGYGSFTNISLNNIGNI +822270

UP..9_1146 +863 ------------------PKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGNEIQLHPYDDNNQGY +962
F NIY++F PN I + GKF G + SN AN +HIYHH DLTNA D YW D N GY
CA..4_0852 +821673 NSNFNRLSGGFVGYVNDNSTFKNIYIFFNPNMSISID-------GGKFFG-VKYSN-ANLTFDNVHIYHHVSDLTNANNDNSYWN--------DFNTNGY +821970

UP..9_1146 +963 IDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINIL +1062
+ K I F DF ++ + P P D+I L +DD+IS NDL+ + L ++I +IN L
CA..4_0852 +821373 VSNKI----------NIHTYNRSNQQSFYQDF------LSKANTISRPTPPTNPSNPTNPDVI-----LGSDDVISANDLDTWLGEILAGNYWI-DINDL +821670

UP..9_1146 +1063 DELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLT---DDAKVLYEANQNRSKNKYEEIDGKNKAVMNF +1162
+ + I+ + QS+ FL A K L +D K Y Q + NK ++ F
CA..4_0852 +821073 NSIK-----------------------------------GISEELKQSISFLEALYGQEGMKEILEGFGNDYKTNYRNYQRFATNK--------ANLLAF +821370

UP..9_1146 +1163 IKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASDDSNGQFTIKGA +1262
I + L K S L Q++L +A+ YN YV +N K D+ +LK ++ L S+ L +I NQ +L WQ+K S+DSN +F I G
CA..4_0852 +820773 INDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKIIGE +821070

UP..9_1146 +1263 FANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVGSF +1343
F N L+ P L+E+ + GNEN++Y+K+SRQ+AN QKQTP FEYEE E EEVEE ++ QKGK CIVSDN++TMNPCV GSF
CA..4_0852 +820473 FKNLALLTPNLDEVIVN-GNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +820713

Score: 121.00 bits: 56.01 e-value: 0.000000
length: 177 gaps: 34 id: 61 positives: 72 coverage: 0.58 query coverage 0.44

UP..9_1146 +727 YSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENIS---IYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYI +826
Y GGFAG NG FNNISLN I +I SS + Y GGF G + F NIS IY + NI+A S + GGFAGY
CA..4_0852 +822276 YVGGFAGGTLNGTFNNISLNNIGDISSSSS------------YVGGFIGYVYDGTFGNISLNNIYSITNIYA-------------SSTSNVYTGGFAGYA +822573

UP..9_1146 +827 NYDKHSKPKFNNIYMYFTPNSIIKSES-KLNENYAGKFAGRISVSNNANPDISKI-HIYHHKKDLTNATADQKYWGN +903
+ F NI + SI S S + Y G FAGR N + I IY H +T W N
CA..4_0852 +821976 ---GSTNGTFYNISLN-NIGSISNSASDSVFYVYTGGFAGRTDSGTYTNISLNNIGDIYSHNGSQISSTGGFTGWAN +822204

UPTC3659_1146 vs: CAQ16704_1287 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3186bp / 1062aa PV: Yes
Function: hemagglutination domain protein

Score: 834.00 bits: 363.57 e-value: 0.000000
length: 662 gaps: 79 id: 296 positives: 357 coverage: 0.53 query coverage 0.43

UP..9_1146 +1 MLIFIPRGGE---SNNFDLTSSCKKLSKQILLSNIVasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKF +100
ML RGG SNN DLTSS KKLSKQILLSNIVASLLFSS+FALPSGGKFTHGT+G+I ING MNI G K S+IQWGGGF I GE VNF S
CA..4_1287 +1266138 MLKLSSRGGVCWGSNNLDLTSSYKKLSKQILLSNIVASLLFSSTFALPSGGKFTHGTTGTININGNTMNINGHKVSSVIQWGGGFSINQGESVNFNGS-- +1266435

UP..9_1146 +101 EGQQNYLNIAHGTSKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFK----AQGASFSPVFKPNPKGGNVVNMGNINAKNV +200
+NYLNIAHGTSKSTIAG+L A NNVFLINPNGVIITKTGTINANRFVAST+SL + FK +FSPVFKPN K GNVVNMGNI A V
CA..4_1287 +1265838 --NKNYLNIAHGTSKSTIAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNNADYTTFKNLTYENAHTFSPVFKPN-KLGNVVNMGNIKADKV +1266135

UP..9_1146 +201 TLQGNKVMLSADTSWDKKNNKIKLNQITADSIDLKGNEVYVDI--STINSKNLTTDAKKGIAYLSATGY------YYNPTRKYNDIIFTTKGVMDKTYNQ +300
L GNKV D K N + L GN VY+D + +NS T + G + + N T N T G N
CA..4_1287 +1265538 LLIGNKV----DIQGGKLGN-------ANSTTHLVGNNVYIDADSANLNSTINVTATQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNN +1265835

UP..9_1146 +301 Y---ISIG-------SDLDWWHFAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSG--------QNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKT +400
+ ++IG +W +FAKGWNE V D F+L ++DF G QNYANY LNG G T MIV ++FAKT
CA..4_1287 +1265238 FKKVLTIGNMENEKANATEWFYFAKGWNEYIGDTQSV--DEFRLVGNVDFSGNKGQGVEGRDWQNYANYC--LNGLG------CTSMIV-----TSFAKT +1265535

UP..9_1146 +401 FDGQGFTLKNINIDTTKLSDNNSKNYIGLFGKADGANFANINVDYKNGGINASND-YVGGFIGLIDKGIYSSITinn-ikeinnnkkLRTASVGGFAGQI +500
FDGQG+TLKNINIDT+ LS N ++G+FG + A NINVDY GGI A++ VGGF+G G +S I++NN + + +GGFAG
CA..4_1287 +1264938 FDGQGYTLKNINIDTSSLS--NKPYFVGIFGSTNNATIKNINVDYMGGGIKATDGARVGGFVGFASNGTFSNISLNNIGDISSSSSSVGFSYIGGFAGNA +1265235

UP..9_1146 +501 NGGTFCnisinkinkiynTGEESF-TGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEI--IAISTHHGTSG +600
+F NIS+N I I +G GGF G F I + N S S +GGFAG+ S G + NI++ ++ I + +G
CA..4_1287 +1264638 GDVSFSNISLNNISSISGSGYRDIRAGGFVGGYAYRGTFSNISL-NNIGNISSSISSTTSVSYTGGFAGYASNGTFSNISLNNIGNISGSSDDYSDSYAG +1264935

UP..9_1146 +601 GFAGWIRGGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKDITNI +662
GFAG G + NI++ + I S+ AGGFAG G F IS+ +I NI
CA..4_1287 +1264338 GFAGFAS-GTFSNISLNNIGNISGSGLTSVS------YAGGFAGYAIDGTFSNISLNNIGNI +1264521

Score: 631.00 bits: 276.01 e-value: 0.000000
length: 690 gaps: 114 id: 262 positives: 344 coverage: 0.53 query coverage 0.43

UP..9_1146 +646 FENISINDVKNISS----VGSA--GGFAGRISGSKFENISINDVKNISST----TSAGGFAG-YLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGE +745
F NIS+N++ +ISS VG + GGFAG F NIS+N++ IS + AGGF G Y FS I+LNNI NI++ S Y+GGFAG
CA..4_1287 +1264830 FSNISLNNIGDISSSSSSVGFSYIGGFAGNAGDVSFSNISLNNISSISGSGYRDIRAGGFVGGYAYRGTFSNISLNNIGNISSSISSTTSVSYTGGFAGY +1265127

UP..9_1146 +746 IYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNI--HAINNAQYHGS-------------DIENGGN-------- +845
NG F NISLN I NI S + AGGFAG G F NIS+ ++ NI + Y G + N GN
CA..4_1287 +1264530 ASNGTFSNISLNNIGNISGSSDDYSDSY-------AGGFAGFASGT-FSNISLNNIGNISGSGLTSVSYAGGFAGYAIDGTFSNISLNNIGNISSSNSNY +1264827

UP..9_1146 +846 --SGSHAGGFAGYI-NYDKHSKPKFNNIYMYFTPNSIIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKYWGN---EIQLHPY +945
S S+AGGF GYI N D S F NIY++F PN I S S +NY GKF GR + ANP + +HIYHH DLTNA D+ YWGN +IQ+H Y
CA..4_1287 +1264230 GGSESYAGGFIGYIYNDDTSSIITFENIYIFFNPNMSI-SASGGRQNYIGKFFGRGYFT-GANPTFTNVHIYHHTNDLTNAITDRNYWGNTNDKIQIHTY +1264527

UP..9_1146 +946 DDNNQ--GYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDK +1045
++ NQ Y DF + A S T P++ D N K LD +D+ ++ +II D+ +
CA..4_1287 +1263930 NNSNQQSSYQDFLSKANT-------------------ISRPTPPSNPTTPPNLTDTNVK------------------LDENDL--HQNIVNEIINDITNN +1264227

UP..9_1146 +1046 FYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKY-----EE +1145
Y +NI L +LK + N KA F+A Y L K A ++QSLDFLLAY+ N G S ++D +EAN KN +
CA..4_1287 +1263630 HYEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFL--------KGNTTKALEVVQSLDFLLAYE--NNGLSTASNDK---FEANGLSVKNTLVTNTKKV +1263927

UP..9_1146 +1146 IDGKNKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVKSKYDSAFKTLKNNLNSLISESQILATAISSNQTILTKWQDKASD +1245
I KN + +F+ DL D + L Q++L +A+ YN YV +N K D+ +LK ++ L S+ L +I NQ +L WQ K S
CA..4_1287 +1263330 IKNKND-LFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLDNLSKELFASINNNQELLQTWQSKTST +1263627

UP..9_1146 +1246 DSNGQFTIKGAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVVG +1335
DSN +F IKG F N L+ P L+E+ + GNEN++Y+K+SRQ+AN QKQTP FEYEE E EEVEE ++ Q CIVSDN++TMNPCVVG
CA..4_1287 +1263030 DSNNHFKIKGEFKNLALLTPNLDEVIVN-GNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQ---ICIVSDNFKTMNPCVVG +1263297

UPTC3659_1146 vs: CSUB8521_1740 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 3249bp / 1083aa PV: No
Function: hemagglutinin domain-containing protein

Score: 918.00 bits: 399.81 e-value: 0.000000
length: 772 gaps: 122 id: 307 positives: 394 coverage: 0.50 query coverage 0.42

UP..9_1146 +20 CKKLSKQILLSNI--------VasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTS +119
KKL+++I+LS I + + LPSGGKFTHGTSGSI G M I G+K NS+IQWGGGF I +VNF N + QNYLNIAHGTS
CS..1_1740 +1731179 MKKLTRHIMLSGITVSLLFSPLMATTNIKPNQLPSGGKFTHGTSGSINTSGNTMTITGDKTNSVIQWGGGFSIGKDAQVNFINKDPQKPQNYLNIAHGTS +1731476

UP..9_1146 +120 KSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADT +219
KS I G+L A NNNVFLINPNGVIITKTGTINANRFVASTTS+ ++F G SFSPVFKP K GNVVNMGNINA +V L GNKV + +
CS..1_1740 +1731479 KSIIEGVLNANNNNVFLINPNGVIITKTGTINANRFVASTTSMSDADMDKFANMKTFNDGLSFSPVFKP-SKTGNVVNMGNINANDVLLIGNKVDIKGNI +1731776

UP..9_1146 +220 SWDKKNNKIKLNQI------TADSIDLKGNEVYVDISTINSKNLTTDAKKGIAYLSATGYYYNPTRKYNDIIFTTK---GVMDK-----------TYNQY +319
N+ + + + TA+ + L GN+V ++I ++ +K + A K A +T +Y K N F T+ V D+ + +Y
CS..1_1740 +1731779 N-GMHNDNVNGDALKNPSGNTANKVHLVGNDVLINIDSVKAKSIIVSAYKSGALEQSTSSFYENGGKINGFTFQTQDYDNVQDEHGNKLEITTNNKFKKY +1732076

UP..9_1146 +320 ISIGSDLDWWHFAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLS +419
+I SD+DW +FAKGWNE + + DT+KL +DIDF AS G+NYA Y I NE T MIVG N AF KTFDGQG+TLKNINIDTT
CS..1_1740 +1732079 ATIASDVDWFYFAKGWNENEHGMRDFF-DTYKLVDDIDFGASEGKNYAHYCI--------SDNECTSMIVGTGYNNAFNKTFDGQGYTLKNINIDTTDTK +1732376

UP..9_1146 +420 DNNSKNYIGLFGKADGANFANINVDYKNGGINASND--YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQI-NGGTFCnisinkinkiyn +519
Y+G+FG A+ A F NINVDY GGI A + YVGGFIG + Y + + N + + VGGF G NG TF
CS..1_1740 +1732379 VTTKPQYVGIFGYANKATFKNINVDYMGGGIKANGNRVYVGGFIG--ESNGYGGDSTFTNISLSNIDNISGSQVGGFIGDTSNGATFS------------ +1732676

UP..9_1146 +520 TGEESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIR-GGKYNNIAVMGVD +619
I +N I IK + +GGF G GG + NI++ + I +IS+ G+ GGF + K++NI + +D
CS..1_1740 +1732679 ---------------------NISLNGIKNIKG--------SYYAGGFIGDSYGGTFSNISLKN---ITSISSSKGSVGGFIAYADVSSKFDNIILDDID +1732976

UP..9_1146 +620 --EIIAHRFDSLEDYGGKLLAGGFAGEISRG-EFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSV----GSAGGFAGRISGSKF +719
EII S GGFAG G +F IS+ ++ NIS G + F NIS+N++ +I GGFAG +
CS..1_1740 +1732979 KIEIIYKNSTS--------YVGGFAGYSDNGVKFTNISLNNLGNISGGRYVGGFIGHNNQKGGT--FTNISLNNIGDIGGRDGYDSDVGGFAGYLENGDV +1733276

UP..9_1146 +720 ENISINDVKNIS----STTSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNI +791
NIS+N + IS + GGF G GN F+ I+L I I+ Y+GGF G+ KFNNI
CS..1_1740 +1733279 SNISLNGINSISGGNNGSKNVGGFIGNAGNVTFTNISLSGINSISGYS-------YTGGFIGQDSRNKFNNI +1733492

Score: 335.00 bits: 148.32 e-value: 0.000000
length: 795 gaps: 175 id: 236 positives: 336 coverage: 0.50 query coverage 0.42

UP..9_1146 +526 VSSGGFAGWISG----GKYNNIAVMDVDEIIAISTHHGTSGGFAGWIR-GGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKD +625
V GGF G G + NI++ ++D I GGF G G + NI++ G+ I G AGGF G+ G F IS+K+
CS..1_1740 +1732457 VYVGGFIGESNGYGGDSTFTNISLSNIDNISGSQV-----GGFIGDTSNGATFSNISLNGIKNI-----------KGSYYAGGFIGDSYGGTFSNISLKN +1732754

UP..9_1146 +626 ITNIssnfsssasaggfageasdgNFENISINDVKNIS-----SVGSAGGFAGRI-SGSKFENISINDVKNISSTTSAGGFAGY--LGNSDFSFITLNNI +725
IT ISS S +A +S F+NI ++D+ I S GGFAG G KF NIS+N++ NIS GGF G+ F+ I+LNNI
CS..1_1740 +1732757 ITSISSSKGSVGGFIAYADVSSK--FDNIILDDIDKIEIIYKNSTSYVGGFAGYSDNGVKFTNISLNNLGNISGGRYVGGFIGHNNQKGGTFTNISLNNI +1733054

UP..9_1146 +726 ENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNS +825
+I + + GGFAG + NG NISLN I I +K V GGF G F NIS+ + I
CS..1_1740 +1733057 GDIGGRDGYDSDV---GGFAGYLENGDVSNISLNGINSISGGNNG-------SKNV--GGFIGNAGNVTFTNISLSGINSISGY---------------- +1733354

UP..9_1146 +826 GSHAGGFAGYINYDKHSKPKFNNIYMYFTPNS-IIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKY---------WGNEIQL +925
S+ GGF G + S+ KFNNIY+YF ++ I +N GKF G +S N + IHIY+ L+NATA KY EI L
CS..1_1740 +1733357 -SYTGGFIG-----QDSRNKFNNIYIYFDEDAKITGKNNGNGQNGTGKFYGWVSSNNKST--YNDIHIYYKDGTLSNATASSKYENKNKNNSKTNGEINL +1733654

UP..9_1146 +926 HPYDDNNQGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKD +1025
H YD+ GY F A + P + P KP P++ + + LD DD+
CS..1_1740 +1733657 HTYDNKTDGYNQFLEKANT------------------------IGKPIVALP---------SKPEQPDVSESVSSDVKLDKDDL---------------- +1733954

UP..9_1146 +1026 KFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGK +1125
NI +LD++L I + + L N + P DK LD S+ QSLDFL N K + ++ +E++ KNKY+ K
CS..1_1740 +1733957 -----NIPVLDDIL---NDILNGEYSVSIDDLGNIKFT----PTDKITLD---SVKQSLDFL-----NEFFKQEGMEELLSKFESDL---KNKYD----K +1734254

UP..9_1146 +1126 NKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVK------SKYDSAFKTLKNNLNSLISE-SQILATAISSNQTILTKWQDK +1225
A+ ++++ + +T + ++ + A ++ + +K YN YV+L+N G ++ K KN L+ IS+ +AT NQ I K Q K
CS..1_1740 +1734257 ALALKDYLQTTIKSET---QGIVNEFNAIKQAYEEELKKYNYYVNLLNEGKSIDNFDFTESAKKIKEYKNQLDGYISDINDKIATKY--NQEI--KEQFK +1734554

UP..9_1146 +1226 ASDDSNGQFTIKGA--FANAILIN-PKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1320
+D FTIK ++N + N P L ++ N+N + Q + + EEE+ E VEE S+ QKGK CIVSDNY+TMN C+V
CS..1_1740 +1734557 YTD-----FTIKNDLFYSNMQIPNQPSLPDVAIQPDNDNSDLTLSFEQTSSFNLKGDEAIKEEEQVEVVEETSLTQKGKICIVSDNYKTMNSCLV +1734839

UPTC3659_1146 vs: CSUB8521_0660 in LMG 24374 (Campylobacter subantarcticus LMG 24374, complete genome.)
Gene length: 3258bp / 1086aa PV: No
Function: hemagglutinin domain-containing protein

Score: 871.00 bits: 379.54 e-value: 0.000000
length: 772 gaps: 125 id: 312 positives: 392 coverage: 0.50 query coverage 0.42

UP..9_1146 +19 SCKKLSKQILLSNI--------VasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGT +118
S KKL+ +I+LS I + + LPSGGKFTH TSGSI N MNI GN S+IQWGGGF I +VNF K E +NYLNIAHGT
CS..1_0660 +637515 SMKKLTHHIILSGITVSLLFSPLMATTNIKPNQLPSGGKFTHKTSGSINTNNNIMNITGNGASSVIQWGGGFSIGEKAQVNF---KGE-NKNYLNIAHGT +637812

UP..9_1146 +119 SKSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFKAQ-----GASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSAD +218
SKS I GIL AG NNVFLINPNGVIITKTGTINANRFVASTTS+ ++F G SFSPVF K GNVVNMGNINA +V L GNKV + +
CS..1_0660 +637815 SKSIIEGILNAGGNNVFLINPNGVIITKTGTINANRFVASTTSMSDADMDKFANMKTFNDGLSFSPVFNS-QKAGNVVNMGNINANDVLLIGNKVDIKGN +638112

UP..9_1146 +219 TSWDKKNNKI-----KLNQITADSIDLKGNEVYVDISTINSKNLTTDAKKGIAYLSATGYYYNPTRKYNDIIFTT------------KGVMDKT-YNQYI +318
K N K TA+ + L GN+V ++I ++ +K + A K A +T +Y K N FTT K ++DK + ++
CS..1_0660 +638115 INGMHKTNTAGDALKKPSGNTANKVHLVGNDVLINIDSVKAKSIIVSAYKSGALEQSTSSFYENGGKINGFTFTTQAYDGIENESKNKRIIDKNDFKKHA +638412

UP..9_1146 +319 SIGSDLDWWHFAKGWNE-KDDFRNNVVGDTFKLTNDIDFKASSGQNYANYWIDLNGDGKKQANEFTNMIVGFKDNSAFAKTFDGQGFTLKNINIDTTKLS +418
+I SD+DW +FAKGWNE K D R+ DT+KL +DIDF AS G+NYA Y I NE T MIVG N AF KTFDGQG+TLKNINIDTT
CS..1_0660 +638415 TIASDVDWFYFAKGWNEDKHDMRD--FFDTYKLVDDIDFGASEGKNYAHYCI--------SDNECTSMIVGTGYNNAFNKTFDGQGYTLKNINIDTTDTK +638712

UP..9_1146 +419 DNNSKNYIGLFGKADGANFANINVDYKNGGINASND--YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQI-NGGTFCnisinkinkiyn +518
Y+G+FG A+ A F NINVDY GGI A + YVGGFIG + Y + + N + + VGGF G NG TF
CS..1_0660 +638715 VTTKPQYVGIFGYANKATFKNINVDYMGGGIKANGNRVYVGGFIG--ESNGYGGDSTFTNISLSNIDNISGSQVGGFIGDTSNGATFS------------ +639012

UP..9_1146 +519 TGEESFTGGFAGWIKQDPYFEQIIINNIDSIKSESDIINLPTVSSGGFAGWISGGKYNNIAVMDVDEIIAISTHHGTSGGFAGWIR-GGKYNNIAVMGVD +618
I +N I IK + +GGF G GG + NI++ + I +IS+ G+ GGF + K++NI + +D
CS..1_0660 +639015 ---------------------NISLNGIKNIKG--------SYYAGGFIGDSYGGTFSNISLKN---ITSISSSKGSVGGFIAYADVSSKFDNIILDDID +639312

UP..9_1146 +619 --EIIAHRFDSLEDYGGKLLAGGFAGEISRG-EFNKISIKDITNIssnfsssasaggfageasdgNFENISINDVKNISSV----GSAGGFAGRISGSKF +718
EII S GGFAG G +F IS+ ++ NIS G + F NIS+N++ +I GGFAG +
CS..1_0660 +639315 KIEIIYKNSTS--------YVGGFAGYSDNGVKFTNISLNNLGNISGGRYVGGFIGHNNQKGGT--FTNISLNNIGDIGGRDGYDSDVGGFAGYLENGDV +639612

UP..9_1146 +719 ENISINDVKNIS----STTSAGGFAGYLGNSDFSFITLNNIENITANNKSRRESVYSGGFAGEIYNGKFNNI +790
NIS+N + IS + GGF G GN F+ I+L I I+ Y+GGF G+ KFNNI
CS..1_0660 +639615 SNISLNGINSISGGNNGSKNVGGFIGNAGNVTFTNISLSGINSISGYS-------YTGGFIGQDSRNKFNNI +639828

Score: 339.00 bits: 150.05 e-value: 0.000000
length: 795 gaps: 175 id: 236 positives: 336 coverage: 0.50 query coverage 0.42

UP..9_1146 +526 VSSGGFAGWISG----GKYNNIAVMDVDEIIAISTHHGTSGGFAGWIR-GGKYNNIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEISRGEFNKISIKD +625
V GGF G G + NI++ ++D I GGF G G + NI++ G+ I G AGGF G+ G F IS+K+
CS..1_0660 +638781 VYVGGFIGESNGYGGDSTFTNISLSNIDNISGSQV-----GGFIGDTSNGATFSNISLNGIKNI-----------KGSYYAGGFIGDSYGGTFSNISLKN +639078

UP..9_1146 +626 ITNIssnfsssasaggfageasdgNFENISINDVKNIS-----SVGSAGGFAGRI-SGSKFENISINDVKNISSTTSAGGFAGY--LGNSDFSFITLNNI +725
IT ISS S +A +S F+NI ++D+ I S GGFAG G KF NIS+N++ NIS GGF G+ F+ I+LNNI
CS..1_0660 +639081 ITSISSSKGSVGGFIAYADVSSK--FDNIILDDIDKIEIIYKNSTSYVGGFAGYSDNGVKFTNISLNNLGNISGGRYVGGFIGHNNQKGGTFTNISLNNI +639378

UP..9_1146 +726 ENITANNKSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRIDGRIFENISIYDVKNIHAINNAQYHGSDIENGGNS +825
+I + + GGFAG + NG NISLN I I +K V GGF G F NIS+ + I
CS..1_0660 +639381 GDIGGRDGYDSDV---GGFAGYLENGDVSNISLNGINSISGGNNG-------SKNV--GGFIGNAGNVTFTNISLSGINSISGY---------------- +639678

UP..9_1146 +826 GSHAGGFAGYINYDKHSKPKFNNIYMYFTPNS-IIKSESKLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKY---------WGNEIQL +925
S+ GGF G + S+ KFNNIY+YF ++ I +N GKF G +S N + IHIY+ L+NATA KY EI L
CS..1_0660 +639681 -SYTGGFIG-----QDSRNKFNNIYIYFDEDAKITGKNNGNGQNGTGKFYGWVSSNNKST--YNDIHIYYKDGTLSNATASSKYENKNKNNSKTNGEINL +639978

UP..9_1146 +926 HPYDDNNQGYIDFKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKD +1025
H YD+ GY F A + P + P KP P++ + + LD DD+
CS..1_0660 +639981 HTYDNKTDGYNQFLEKANT------------------------IGKPIVALP---------SKPEQPDVSESVSSDVKLDKDDL---------------- +640278

UP..9_1146 +1026 KFYIVNINILDELLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGK +1125
NI +LD++L I + + L N + P DK LD S+ QSLDFL N K + ++ +E++ KNKY+ K
CS..1_0660 +640281 -----NIPVLDDIL---NDILNGEYSVSIDDLGNIKFT----PTDKITLD---SVKQSLDFL-----NEFFKQEGMEELLSKFESDL---KNKYD----K +640578

UP..9_1146 +1126 NKAVMNFIKNDLNEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVK------SKYDSAFKTLKNNLNSLISE-SQILATAISSNQTILTKWQDK +1225
A+ ++++ + +T + ++ + A ++ + +K YN YV+L+N G ++ K KN L+ IS+ +AT NQ I K Q K
CS..1_0660 +640581 ALALKDYLQTTIKSET---QGIVNEFNAIKQAYEEELKKYNYYVNLLNEGKSIDNFDFTESAKKIKEYKNQLDGYISDINDKIATKY--NQEI--KEQFK +640878

UP..9_1146 +1226 ASDDSNGQFTIKGA--FANAILIN-PKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1320
+D FTIK ++N + N P L ++ N+N + Q + + EEE+ E VEE S+ QKGK CIVSDNY+TMN C+V
CS..1_0660 +640881 YTD-----FTIKNDLFYSNMQIPNQPSLPDVAIQPDNDNSDLTLSFEQTSSFNLKGDEAIKEEEQVEVVEETSLTQKGKICIVSDNYKTMNSCLV +641163

UPTC3659_1146 vs: CSUB8523_0748 in LMG 24377 (Campylobacter subantarcticus LMG 24377, complete genome.)
Gene length: 3003bp / 1001aa PV: No
Function: hemagglutinin domain-containing protein

Score: 697.00 bits: 304.48 e-value: 0.000000
length: 635 gaps: 79 id: 262 positives: 336 coverage: 0.52 query coverage 0.40

UP..9_1146 +20 CKKLSKQILLSNI--------VasllfsssfalPSGGKFTHGTSGSISINGKEMNIAGNKQNSIIQWGGGFNIANGEKVNFGNSKFEGQQNYLNIAHGTS +119
KKL+ +I+LS I + + LPSGGKFTHGTSGSI N MNI G+K NS+IQWGGGF I +VNF K E +NYLNIAHGTS
CS..3_0748 +695956 MKKLTHHIMLSGITVSLLFSPLMATTKIKPNQLPSGGKFTHGTSGSINTNNNIMNITGDKTNSVIQWGGGFSIGEKAQVNF---KGE-NKNYLNIAHGTS +696253

UP..9_1146 +120 KSTIAGILEAGNNNVFLINPNGVIITKTGTINANRFVASTTSLQAQHFEEFK-----AQGASFSPVFKPNPKGGNVVNMGNINAKNVTLQGNKVMLSADT +219
KSTI GIL AG NNVFLINPNGVIITKTGTINANRFV ST+S+ + F + G SFSPVF K GNVVNMGNINA +V L GNKV + +
CS..3_0748 +696256 KSTIEGILNAGGNNVFLINPNGVIITKTGTINANRFVTSTSSMSDADMKTFANLKDLSAGTSFSPVFNS-QKAGNVVNMGNINANDVLLIGNKVDIQSG- +696553

UP..9_1146 +220 SWDKKNNKIKL--NQITADSIDLKGNEVYVDISTINSKNLTTDAKKGIAYLSATGYYYNPTRKYNDIIFT-TKGVM----DKTYNQYISIGSDLD----- +319
K+N K L N + D+ ++K N +D++ +N + K + Y + N++ +T T G + + + ++IG D
CS..3_0748 +696556 KIGKENSKTHLVGNDVYIDADNVKLNST-IDVTAMNGGHIQRQMNK----FANDDYKFGENATINNVNYTETNGQIRNGNSSNFKKILTIGNMGDEKANA +696853

UP..9_1146 +320 --WWHFAKGWNEKDDFRNNVVGDTFKLTNDIDFKASSG------QNYANYWIDLNGDGKKQANEFTNMIVGFK-DNSAFAKTFDGQGFTLKNINIDTTKL +419
W +FAKGWNE + D F+L +IDF G QNY NY ID G T MIVG N AF KTFDGQG+TLKNINIDTT L
CS..3_0748 +696856 TEWFYFAKGWNENQGETRSI--DEFRLVGNIDFSGNQGQNKEGSQNYTNYCIDGLG--------CTSMIVGTDYYNNAFNKTFDGQGYTLKNINIDTTTL +697153

UP..9_1146 +420 SDNNSKNYIGLFGKADGANFANINVDYKNGGINASND----YVGGFIGLIDKGIYSSITinnikeinnnkkLRTASVGGFAGQI-NGGTFCn-isinkin +519
+N Y+G+FG A+ A F NINVDY GGI A N+ +VGGF+G ++ I++NNI +I + VGGFAG+I N TF N N +
CS..3_0748 +697156 --DNKPQYVGIFGSANKATFKNINVDYMGGGIKAKNNNGNLHVGGFVGESYNSTFTNISLNNIGDISSSND-DYSYVGGFAGRIGNNATFSNISLNNIGD +697453

UP..9_1146 +520 kiynTGEESFTGGFAGWIKQDPYFEQIIINNID-SIKSESDIINLPTVSSGGFAGWISGGK--YNNIAVMDVDEIIAISTHHGTSGGFAGWI--RGGKYN +619
S GGFAG + + NI S+GGFAG + K NI+ ++ I+ S+ +GGFAG+I +
CS..3_0748 +697456 ISSSNNNNSSAGGFAGHV----VVRNATLTNISLNNIGNISSSSNNNSSAGGFAGHVVVDKATLTNIS-LNNIGNISSSSNNSYAGGFAGYIIVDNTTFS +697753

UP..9_1146 +620 NIAVMGVDEIIAHRFDSLEDYGGKLLAGGFAGEIS +654
NI++ + I + +S + Y AGGF G IS
CS..3_0748 +697756 NISLNDIGNISSSNDESYDSY-----AGGFVGRIS +697858

Score: 342.00 bits: 151.34 e-value: 0.000000
length: 680 gaps: 157 id: 216 positives: 300 coverage: 0.52 query coverage 0.40

UP..9_1146 +663 AGGFAGRISGSKFENISINDVKNISST----TSAGGFAGYLG-NSDFSFITLNNIENITANNKSRRESVYSGGFAGEIY--NGKFNNISLNHIQNIESSY +762
GGF G S F NIS+N++ +ISS+ + GGFAG +G N+ FS I+LNNI +I++ S +GGFAG + N NISLN I NI SS
CS..3_0748 +697213 VGGFVGESYNSTFTNISLNNIGDISSSNDDYSYVGGFAGRIGNNATFSNISLNNIGDISS---SNNNNSSAGGFAGHVVVRNATLTNISLNNIGNISSSS +697510

UP..9_1146 +763 TPENEDEWFAKQV-------------------------YAGGFAGRI--DGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGGFAGYIN--YD +862
FA +V YAGGFAG I D F NIS+ D+ NI + N+ Y S+AGGF G I Y
CS..3_0748 +697513 NNNSSAGGFAGHVVVDKATLTNISLNNIGNISSSSNNSYAGGFAGYIIVDNTTFSNISLNDIGNISSSNDESYD-----------SYAGGFVGRISGYYS +697810

UP..9_1146 +863 KHSKPKFNNIYMYFTPNSIIKSES--KLNENYAGKFAGRISVSNNANPDISKIHIYHHKKDLTNATADQKY----------WGNEIQLHPYDDNNQGYID +962
KF NIYMYF ++ I + + EN AGKF G N IHIY+ L+NATA KY ++I LH Y D GY
CS..3_0748 +697813 YTGNVKFENIYMYFKDDAKITASGGDRNRENKAGKFYGHEDNKNSVTSTFNNIHIYYKDGTLSNATASSKYENEVKNDKEAQNDKINLHTYTDEADGYKQ +698110

UP..9_1146 +963 FKTAALAALNGLKEIDCGAGRKCLVFTSDFKVDNPNITSPDIPDFNAKQPKPLIPNIEDIINEQATLDTDDIISKNDLEEQIIADLKDKFYIVNINILDE +1062
F L+ K + GA + P IT P KP P++ + + LD DD+ I L D IL++
CS..3_0748 +698113 F-------LDKAKHV-TGA-----------SITPPTITPP---------SKPEQPDVSEGVSSDVKLDKDDL---------NIPVLND--------ILND +698410

UP..9_1146 +1063 LLKAYSKIDKDNPTSKAEFLANYLLSKDKYPDDKERLDIAHSMIQSLDFLLAYQTNNTGKSKLTDDAKVLYEANQNRSKNKYEEIDGKNKAVMNFIKNDL +1162
+L + D+ L N + P DK LD S+ QSLDFL N K + ++ +E++ KNKY+ K A+ ++++ +
CS..3_0748 +698413 ILNGKYSVSIDD-------LGNIKFT----PTDKITLD---SVKQSLDFL-----NEFFKQEGMEELLNKFESDL---KNKYD----KALALKDYLQTTI +698710

UP..9_1146 +1163 NEKTkdskdllkqllakqkeldSAVKAYNAYVDLINRGVK------SKYDSAFKTLKNNLNSLISE-SQILATAISSNQTILTKWQDKASDDSNGQFTIK +1262
+T + ++ + A ++ + +K YN YV+L+N G ++ K KN L+ IS+ +AT NQ I K Q K +D FTIK
CS..3_0748 +698713 KSET---QGIVNEFNAIKQAYEEELKKYNYYVNLLNEGKSIDNFDFTESAKKIKEYKNQLDGYISDINDKIATKY--NQEI--KEQFKYTD-----FTIK +699010

UP..9_1146 +1263 GAFANAILINPKLNEITNDSGNENDEYQKISRQIANLQKQTPIFeyeeeeteeveeASMNQKGKTCIVSDNYRTMNPCVV +1342
+ + P I D+G +++ S NL+ I EEE+ E VEE S+ QKGK CIVSDNY+TMN C+V
CS..3_0748 +699013 NDLFYSNMQIPNQPSIP-DTGSSSLSFEQTSS--FNLKGDEAI--KEEEQVEVVEETSLTQKGKICIVSDNYKTMNSCLV +699250

Score: 112.00 bits: 52.13 e-value: 0.000000
length: 105 gaps: 23 id: 41 positives: 52 coverage: 0.52 query coverage 0.40

UP..9_1146 +720 KSRRESVYSGGFAGEIYNGKFNNISLNHIQNIESSYTPENEDEWFAKQVYAGGFAGRI-DGRIFENISIYDVKNIHAINNAQYHGSDIENGGNSGSHAGG +819
K ++ GGF GE YN F NISLN I +I SS D++ Y GGFAGRI + F NIS+ ++ DI N S AGG
CS..3_0748 +697189 KNNNGNLHVGGFVGESYNSTFTNISLNNIGDISSS-----NDDY----SYVGGFAGRIGNNATFSNISLNNI-------------GDISSSNNNNSSAGG +697486

UP..9_1146 +820 FAGYI +824
FAG++
CS..3_0748 +697489 FAGHV +697501