CHH_1055 vs: CFT03427_0957 in 03-427 (Campylobacter fetus subsp. testudinum 03-427, complete genome.)
Gene length: 1921bp / 640aa PV: Yes
Function: No annotation dataScore: 411.00 bits: 181.11 e-value: 0.000000
length: 170 gaps: 5 id: 94 positives: 123 coverage: 0.53 query coverage 0.53
CHH_1055 +1 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQ----TQYGALIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLK +100
++ + L+ DI+ F TLLNA+SLAISND +IL FLL +S FKNEYK+ FF+ + IFK++ F FLD R+L SYT++SNKIGL + KF+K
CF..7_0957 +980183 VMDSNELLNDIECKFKTLLNAKSLAISNDSKILSFLLTESKFKNEYKDMFFEIHKSNEQNIAIFKQNAFFEFLDTRVLGNSYTAYSNKIGLTNAINKFIK +980480
CHH_1055 +101 NSQNVVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGGQNDTLENVLKN +170
+ VVL FPFKD V+KGSQSKD+DK+ E+FFNNIL KSEIDVLF+ K L NFELI + + L+++L N
CF..7_0957 +980483 SNEQVVLSFPFKDGVIKGSQSKDEDKTNEIFFNNILDKSEIDVLFAKKALYNFELISADEQN-LQDILAN +980690
Score: 496.00 bits: 217.77 e-value: 0.000000
length: 188 gaps: 14 id: 109 positives: 127 coverage: 0.53 query coverage 0.53
CHH_1055 +169 NLLIKGNNLIALHTLKEHFHHQSEQNKVKLIYIDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGREN +268
NLLIKGNNL+ALH LKE F NKVKLIYIDPPYNT DSFNYNDRF HS+WLTFMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGREN
CF..7_0957 +980707 NLLIKGNNLLALHCLKERF-----ANKVKLIYIDPPYNTSNDSFNYNDRFSHSTWLTFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGREN +981004
CHH_1055 +269 FVSCFVCVSAPAGTQSSVF-VAQQHNYCLSYAKNKNSLKLFNIklteqelkekykekdeyGNFYSERIWKRGEGGRMEDVPSLHFPVY +356
FV+CF+ + P G Q S + +A+ H Y L Y+K ++ FN K + F + K G +D P + +P++
CF..7_0957 +981007 FVACFIPLMNPRGRQESSYPIAKSHEYILCYSKKEDLATFFNF--------GIIKNDEINDEFRLLSLRKSGNASLRKDRPNMFYPIF +981268
Score: 568.00 bits: 248.83 e-value: 0.000000
length: 279 gaps: 7 id: 139 positives: 179 coverage: 0.53 query coverage 0.53
CHH_1055 +371 NTKNLIKIIPYQTKGVLGRWTWSREKMKNERHKLRVKI-VNNEYVLHKKLYSHED---KGKLPNSIITSDIARTELGSLEIKEIFN-DKVFSYPKSEKLL +470
N K I I P +T GRW W + ++N L K EY ++ K Y +D KG+ + I + ++ +F +++FSYPKSE L+
CF..7_0957 +981270 NDKSEITIYPIKTNAEEGRWRWQKSNVENNINLLVCKENSKGEYDIYVKDYIVKDGQTKGEKTKTFIIDKNIINDKAKEHMEILFGRNELFSYPKSEFLM +981567
CHH_1055 +471 QYILEISTNENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIKSITKERLKKVIEGEQGGISKAVNWQGGGNLIYCELASLNAKFIEKIENSSDENEL +570
Q I+EIST END+V+DFFAGSGTTLAVA KM R++IGIEQM+YIK+IT ERLKKVI GEQGGISKAV W GGGN IY EL LNA F +KI N+ +ENEL
CF..7_0957 +981570 QRIIEISTQENDIVMDFFAGSGTTLAVAMKMNRKFIGIEQMDYIKTITCERLKKVIAGEQGGISKAVGWNGGGNFIYSELMPLNATFKDKIINAKNENEL +981867
CHH_1055 +571 NQIYENLQKLAFIDYRVDIKNDLKDMEFSNLDFIEKKRILKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGN +649
NQIY+ L+ AF+DYRV+ D D EF L +KK+ L +D+NMDY+ + DI+D+ Y IDE +N FY N
CF..7_0957 +981870 NQIYDELKAKAFLDYRVEF--DKFDEEFNKLSLEDKKKNLLLTMDKNMDYVLFDDIEDKNYNIDENCIKINKAFYGQNN +982104
CHH_1055 vs: CR44_04865 in pet-3 (Campylobacter fetus subsp. testudinum strain pet-3, complete genome.)
Gene length: 1922bp / 640aa PV: Yes
Function: No annotation dataScore: 411.00 bits: 181.11 e-value: 0.000000
length: 170 gaps: 5 id: 94 positives: 123 coverage: 0.54 query coverage 0.53
CHH_1055 +1 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQ----TQYGALIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLK +100
++ + L+ DI+ F TLLNA+SLAISND +IL FLL +S FKNEYK+ FF+ + IFK++ F FLD R+L SYT++SNKIGL + KF+K
CR44_04865 +988739 VMDSNELLNDIECKFKTLLNAKSLAISNDSKILSFLLTESKFKNEYKDMFFEIHKSNEQNIAIFKQNAFFEFLDTRVLGNSYTAYSNKIGLTNAINKFIK +989036
CHH_1055 +101 NSQNVVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGGQNDTLENVLKN +170
+ VVL FPFKD V+KGSQSKD+DK+ E+FFNNIL KSEIDVLF+ K L NFELI + + L+++L N
CR44_04865 +989039 SNEQVVLSFPFKDGVIKGSQSKDEDKTNEIFFNNILDKSEIDVLFAKKALYNFELISADEQN-LQDILAN +989246
Score: 1067.00 bits: 464.08 e-value: 0.000000
length: 482 gaps: 23 id: 249 positives: 312 coverage: 0.54 query coverage 0.53
CHH_1055 +169 NLLIKGNNLIALHTLKEHFHHQSEQNKVKLIYIDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGREN +268
NLLIKGNNL+ALH LKE F NKVKLIYIDPPYNT DSFNYNDRF HS+WLTFMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGREN
CR44_04865 +989263 NLLIKGNNLLALHCLKERF-----ANKVKLIYIDPPYNTSNDSFNYNDRFSHSTWLTFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGREN +989560
CHH_1055 +269 FVSCFVCVSAPAGTQSSVF-VAQQHNYCLSYAKNKNSLKLFNIklteqelkekykekdeyGNFYSERIWKRGEGGRMEDVPSLHFPVYYDKEQDKIFIDD +368
FV+CF+ + P G Q S + +A+ H Y L Y+K ++ FN + + + F + K G +D P + +P++Y+ I+
CR44_04865 +989563 FVACFIPLMNPRGRQESSYPIARSHEYILCYSKKEDLATFFNFGIIKNDEIN--------DEFRLLSLRKSGNASLRKDRPNMFYPIFYNTNTQSIYT-- +989860
CHH_1055 +369 ENSNTKNLIKIIPYQTKGVLGRWTWSREKMKNERHKLRVKI-VNNEYVLHKKLYSHED---KGKLPNSIITSDIARTELGSLEIKEIFN-DKVFSYPKSE +468
+ N K I I P +T GRW W + ++N L K EY ++ K Y +D KG+ + I + ++ +F +++FSYPKSE
CR44_04865 +989863 KQRNDKSEITIYPIKTNAEEGRWRWQKSNVENNINLLVCKENSKGEYDIYVKDYIVKDGQTKGEKTKTFIIDKNIINDKAKEHMEILFGRNELFSYPKSE +990160
CHH_1055 +469 KLLQYILEISTNENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIKSITKERLKKVIEGEQGGISKAVNWQGGGNLIYCELASLNAKFIEKIENSSDE +568
L+Q I+EIST END+V+DFFAGSGTTLAVA KM R++IGIEQM+YIK+IT ERLKKVI GEQGGISKAV W GGGN IY EL LNA F +KI N+ +E
CR44_04865 +990163 FLMQRIIEISTQENDIVMDFFAGSGTTLAVAMKMNRKFIGIEQMDYIKTITCERLKKVIAGEQGGISKAVGWNGGGNFIYSELMPLNATFKDKIINAKNE +990460
CHH_1055 +569 NELNQIYENLQKLAFIDYRVDIKNDLKDMEFSNLDFIEKKRILKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGN +650
NELNQIY+ L+ AF+DYRV+ D D EF L +KK+ L +D+NMDY+ + DI+D+ Y IDE +N FY N
CR44_04865 +990463 NELNQIYDELKAKAFLDYRVEF--DKFDEEFNKLSLEDKKKNLLLTMDKNMDYVLFDDIEDKNYNIDENCIKINKAFYGQNN +990706
CHH_1055 vs: CHL_1051 in CCUG 27631 (Campylobacter hyointestinalis subsp. lawsonii CCUG 27631, complete genome.)
Gene length: 1857bp / 619aa PV: Yes
Function: type III restriction/modification system, mod subunitScore: 1231.00 bits: 534.83 e-value: 0.000000
length: 302 gaps: 3 id: 255 positives: 273 coverage: 0.73 query coverage 0.69
CHH_1055 +1 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQTQYGALIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLKNSQN +100
MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKS +KNEYKERFFQTQYGALIFKKDEFLNFLDLRLLS SYTSFSNKIGLG SEK+FLKNS+N
CHL_1051 +966518 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSQYKNEYKERFFQTQYGALIFKKDEFLNFLDLRLLSFSYTSFSNKIGLGVSEKRFLKNSEN +966815
CHH_1055 +101 VVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGGQNDTLENVLKNKPNLLIKGNNLIALHTLKEHFHHQSEQNKVKLIY +200
VVLNFPFKDCVLKG+QSKDD+K TELFFNNILAKSEIDVLF+PKVLN FELIGGG LE LKN+PNLLIKGNNLIALH+LKE+F HQSEQNKVKLIY
CHL_1051 +966818 VVLNFPFKDCVLKGAQSKDDEKNTELFFNNILAKSEIDVLFAPKVLNKFELIGGGD---LETTLKNRPNLLIKGNNLIALHSLKEYFRHQSEQNKVKLIY +967115
CHH_1055 +201 IDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCFVCVSAPAGTQSSVFVAQQHNYCLSYAK +300
IDPPYNTGSDSFNYNDRFNHS++LTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSC + S+ + ++ H Y L ++K
CHL_1051 +967118 IDPPYNTGSDSFNYNDRFNHSTYLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCSIFEKVKIRKNSAKYFSESHEYILIFSK +967415
CHH_1055 +301 NK +302
K
CHL_1051 +967418 HK +967421
Score: 878.00 bits: 382.56 e-value: 0.000000
length: 260 gaps: 3 id: 194 positives: 207 coverage: 0.73 query coverage 0.69
CHH_1055 +390 WTWSREKMKNERHKLRVKI-VNNEYVLHKKLYSHEDKGKLPNSIITSD-IARTELGSLEIKEIF-NDKVFSYPKSEKLLQYILEISTNENDLVLDFFAGS +489
W S E K + R+ +N Y + KK S G +P +I D G +K++F +KVF PK EKLL+ ILEIST ENDLVLDFFAGS
CHL_1051 +967592 WRLSEENFKKHVEENRIWWGKDNSYPMIKKFLSEVQDGLVPRTIFYYDETGGGPAGDKALKDLFEGNKVFDNPKPEKLLEQILEISTQENDLVLDFFAGS +967889
CHH_1055 +490 GTTLAVAHKMKRRYIGIEQMEYIKSITKERLKKVIEGEQGGISKAVNWQGGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKN +589
GTTLAVAHKMKRRYIGIEQMEYI+SITKERLKKVIEGEQGGISKAV W GGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKN
CHL_1051 +967892 GTTLAVAHKMKRRYIGIEQMEYIESITKERLKKVIEGEQGGISKAVSWSGGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKN +968189
CHH_1055 +590 DLKDMEFSNLDFIEKKRILKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGNDE +649
DLKD EFSNLDF KKRILKKCLDRNMDYIPYADI D EYKIDEQTR+LN IFYKGGNDE
CHL_1051 +968192 DLKDDEFSNLDFTSKKRILKKCLDRNMDYIPYADIKDSEYKIDEQTRVLNDIFYKGGNDE +968369
CHH_1055 vs: CIG11343_0145 in RM11343 (Campylobacter iguaniorum strain RM11343, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: type III restriction/modification system, mod subunitScore: 800.00 bits: 348.91 e-value: 0.000000
length: 310 gaps: 14 id: 181 positives: 219 coverage: 0.50 query coverage 0.50
CHH_1055 +6 SLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQTQYGA-----LIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLKNSQN +105
+L+ D++ F +LL R LA++ +L FLL+ S+FK Y E FF TQ+ L FK+ EFL FL+LR+L S+T+FSNKI L AS+ K + +
CI..3_0145 +132276 ALLDDLETRFGSLLGVRNLAVARKDELLSFLLDGSAFKARYLELFF-TQHKLNGREFLEFKEKEFLQFLNLRVLGTSFTAFSNKIAL-ASDDKLIIKDEK +132573
CHH_1055 +106 VVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGG---QNDTLENVLKNKPNLLIKGNNLIALHTLKEHFHHQSEQNKVK +205
+VLNFPFKD V+KG+QSKD+ K+ ELFFN+ILA+ EID LF PK L NF+LI N L+ LKN PNLLIKGNNL+ALHTLK+ + +VK
CI..3_0145 +131976 IVLNFPFKDGVIKGAQSKDESKTNELFFNDILARDEIDALFRPKALQNFKLITPAFARGNGNLKSALKNTPNLLIKGNNLLALHTLKKR---KDIYGQVK +132273
CHH_1055 +206 LIYIDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCFVCVSAPAGTQSSVFVAQQHNYCLS +305
LIYIDPPYNTG DSFNYND+FNHSSWL FMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFV C V + A+ +Y L
CI..3_0145 +131676 LIYIDPPYNTGNDSFNYNDKFNHSSWLCFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVGC-VAWRRTDNQPNIGYFARVKDYILI +131973
CHH_1055 +306 YAKNKNSLKL +315
++KNK LK
CI..3_0145 +131376 FSKNKINLKF +131403
Score: 613.00 bits: 268.24 e-value: 0.000000
length: 242 gaps: 11 id: 141 positives: 168 coverage: 0.50 query coverage 0.50
CHH_1055 +416 HKKLYSHEDKGKLPNSIITSDIARTELGSLEIKEIFNDKVFSYPKSEKLLQYILEISTNENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIKSITKE +515
+ K+Y KG++ N D+ + SLE+++ F +VFS+PK E LLQ ILEISTNENDLVLDFFAGSGTTLAVAHKMKRR+IGIEQM+YI+SITKE
CI..3_0145 +131133 YGKIYLDNAKGQIVNDFWDIDVGTNQGASLELEKTFSKRVFSFPKPEPLLQRILEISTNENDLVLDFFAGSGTTLAVAHKMKRRWIGIEQMDYIESITKE +131430
CHH_1055 +516 RLKKVIEGEQGGISKAVNWQG------GGNL-----IYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDMEFSNLDFIEKKRI +615
RL KVIEGEQGGISKAV W G L IYCEL LNA F E+I+ DE EL +IY++LQ+ AF+DYRVDIK LKD EF L+ EKKRI
CI..3_0145 +130833 RLIKVIEGEQGGISKAVGWNPLFPSLMDGELPKNEFIYCELMPLNAVFKEQIKALNDESELERIYKDLQEKAFVDYRVDIKEMLKDKEFEALNLDEKKRI +131130
CHH_1055 +616 LKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGNDE +657
L LD NMDY+ Y DI D + + + LN F+KGG DE
CI..3_0145 +130533 LHMVLDSNMDYVLYDDIKDEDLGVSSELVELNREFFKGGEDE +130656
CHH_1055 vs: CIG11343_0014 in RM11343 (Campylobacter iguaniorum strain RM11343, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: type III restriction/modification system, mod subunitScore: 800.00 bits: 348.91 e-value: 0.000000
length: 310 gaps: 14 id: 181 positives: 219 coverage: 0.50 query coverage 0.50
CHH_1055 +6 SLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQTQYGA-----LIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLKNSQN +105
+L+ D++ F +LL R LA++ +L FLL+ S+FK Y E FF TQ+ L FK+ EFL FL+LR+L S+T+FSNKI L AS+ K + +
CI..3_0014 +15893 ALLDDLETRFGSLLGVRNLAVARKDELLSFLLDGSAFKARYLELFF-TQHKLNGREFLEFKEKEFLQFLNLRVLGTSFTAFSNKIAL-ASDDKLIIKDEK +16190
CHH_1055 +106 VVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGG---QNDTLENVLKNKPNLLIKGNNLIALHTLKEHFHHQSEQNKVK +205
+VLNFPFKD V+KG+QSKD+ K+ ELFFN+ILA+ EID LF PK L NF+LI N L+ LKN PNLLIKGNNL+ALHTLK+ + +VK
CI..3_0014 +15593 IVLNFPFKDGVIKGAQSKDESKTNELFFNDILARDEIDALFRPKALQNFKLITPAFARGNGNLKSALKNTPNLLIKGNNLLALHTLKKR---KDIYGQVK +15890
CHH_1055 +206 LIYIDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCFVCVSAPAGTQSSVFVAQQHNYCLS +305
LIYIDPPYNTG DSFNYND+FNHSSWL FMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFV C V + A+ +Y L
CI..3_0014 +15293 LIYIDPPYNTGNDSFNYNDKFNHSSWLCFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVGC-VAWRRTDNQPNIGYFARVKDYILI +15590
CHH_1055 +306 YAKNKNSLKL +315
++KNK LK
CI..3_0014 +14993 FSKNKINLKF +15020
Score: 613.00 bits: 268.24 e-value: 0.000000
length: 242 gaps: 11 id: 141 positives: 168 coverage: 0.50 query coverage 0.50
CHH_1055 +416 HKKLYSHEDKGKLPNSIITSDIARTELGSLEIKEIFNDKVFSYPKSEKLLQYILEISTNENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIKSITKE +515
+ K+Y KG++ N D+ + SLE+++ F +VFS+PK E LLQ ILEISTNENDLVLDFFAGSGTTLAVAHKMKRR+IGIEQM+YI+SITKE
CI..3_0014 +14750 YGKIYLDNAKGQIVNDFWDIDVGTNQGASLELEKTFSKRVFSFPKPEPLLQRILEISTNENDLVLDFFAGSGTTLAVAHKMKRRWIGIEQMDYIESITKE +15047
CHH_1055 +516 RLKKVIEGEQGGISKAVNWQG------GGNL-----IYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDMEFSNLDFIEKKRI +615
RL KVIEGEQGGISKAV W G L IYCEL LNA F E+I+ DE EL +IY++LQ+ AF+DYRVDIK LKD EF L+ EKKRI
CI..3_0014 +14450 RLIKVIEGEQGGISKAVGWNPLFPSLMDGELPKNEFIYCELMPLNAVFKEQIKALNDESELERIYKDLQEKAFVDYRVDIKEMLKDKEFEALNLDEKKRI +14747
CHH_1055 +616 LKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGNDE +657
L LD NMDY+ Y DI D + + + LN F+KGG DE
CI..3_0014 +14150 LHMVLDSNMDYVLYDDIKDEDLGVSSELVELNREFFKGGEDE +14273