CAQ16704_0012 vs: CONCH_1474 in LMG 11760 (Campylobacter lari subsp. concheus LMG 11760, complete genome.)
Gene length: 3060bp / 1020aa PV: No
Function: hemagglutinin domain-containing proteinScore: 851.00 bits: 370.91 e-value: 0.000000
length: 561 gaps: 66 id: 292 positives: 335 coverage: 0.51 query coverage 0.57
CA..4_0012 +5 KLSNQLLYYKKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNI +104
KL ++ KL+NHI LSGITVS+LFSPLMA LPSGGKFTHGT+GSI GN MNI G N VIQWGGGFNIGK+ QV F G N NYLNI
CONCH_1474 +1443257 KLKGLMMKTYKLSNHIILSGITVSMLFSPLMA-----LPSGGKFTHGTSGSISTSGNNMNIMGNGT--NSVIQWGGGFNIGKNEQVNF-NGSN-KNYLNI +1443554
CA..4_0012 +105 AHGTSKSTIAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKV-V +204
AHGTSKSTI G+LNA GNNVFLINPNGVIITKTGTINANRFVASTSSM M+ FAN+ F++GLSFSPVFKP K GNVVNMGNI +++ L GNKV +
CONCH_1474 +1443557 AHGTSKSTIEGILNASGNNVFLINPNGVIITKTGTINANRFVASTSSMSDDNMKAFANLKSFDEGLSFSPVFKPHKAGNVVNMGNINTNDVLLIGNKVDI +1443854
CA..4_0012 +205 LGSENYNNINKVMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKIS-------------GNNNFKKDAYVGIGSD- +304
G N K L GNEV+VD S+ + +NV A G + N YSF KI G FKK +G D
CONCH_1474 +1443857 QGGRLGNEKSKT-----HLVGNEVFVDADSVKLSST--INVTALKGGYIQRQMINFANNNYSFGNNIKINNVDYTETNGQTHKGSSSFKKALTIGNMGDE +1444154
CA..4_0012 +305 ----VDWWHFAKGWNENKAGFRTSASEYRLTKDIDFGGNNN--------KNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSES +404
++WWHF+KGWNE G E+RL DIDF GN +NYANYCIDGLGCTSMIVG N FTKTF+GQGY LKNIN+D ++L +S
CONCH_1474 +1444157 KANTIEWWHFSKGWNEG-LGDTKNIDEFRLVDDIDFSGNQGNGVEGKDWQNYANYCIDGLGCTSMIVGSTDTNAFTKTFNGQGYALKNINMDITTLEDKS +1444454
CA..4_0012 +405 E--YVGIFGYINDATIKNINVDYMGGGIRTNT--------YaggfagsasgtfsnislnnignisgnsngDQSfvagfagfaggtfSNISLNNIGDISGY +504
E Y+GIFG + A KNIN+DYM G I+ G S F ISL NI IS D S V GF G A GTFSNISLNNI +I
CONCH_1474 +1444457 EYTYIGIFGNSDGANFKNINIDYMNGKIQKQKNVNDGWRYIGGFIGKSNNSFFEYISLSNIESISNSNRDDNSVVGGFIGSASGTFSNISLNNIRNIENS +1444754
CA..4_0012 +505 H----AGGFAGWLAGIFTNISLHDIGNISGNKSHGI------AGGFAGSYENDSTFKNIYI +565
GGFAG G F+NISL +I NIS +G+ AGGFAG+ + TF NI +
CONCH_1474 +1444757 ADDTWTGGFAGSTLGTFSNISLNNIENISSYSDYGMYGGWSRAGGFAGT--TNGTFSNISL +1444937
Score: 724.00 bits: 316.12 e-value: 0.000000
length: 526 gaps: 70 id: 231 positives: 300 coverage: 0.51 query coverage 0.57
CA..4_0012 +454 SNISLNNIGDISGY----------HAGGFAGWLAGIFTNISLHDIGNIS------GNK-SHGIAGGFAG-SYEND------------------------- +553
SNISLNNI +IS Y AGGFAG G F+NISL +I NIS GNK AGGF G SY D
CONCH_1474 +1444757 SNISLNNIENISSYSDYGMYGGWSRAGGFAGTTNGTFSNISLNNIKNISSRGGNYGNKYGNSYAGGFVGESYNSDFDNISLNSIEKITAYGAWGGYAGGF +1445054
CA..4_0012 +554 ---------STFKNIYIFFNPNAKISGR--APGKFFGQPFWT--AHLNNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKAnti +653
++F NI+I+FNPN + R + GK FG+ F + A L+NIHIYHS DL A D+NYWG T ++IQIHTY++S Q +Y+DFLSKA+TI
CONCH_1474 +1445057 AGGVGYPYRASFSNIFIYFNPNITLNARKDSSGKLFGKLFLSHNAFLDNIHIYHSDKDLHSATADQNYWGSTSNEIQIHTYDDSTQNNAYKDFLSKADTI +1445354
CA..4_0012 +654 srptppsnpttppnltdtnVKLDENDLHQN-IVNEIINDITNNHYEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYE +753
+P PS P P N + L +DL+Q+ I NEII DI Y I I LL+ML+++ NY NMNE QK F+AKYFL G+ T+ALEV+QSL+F+LAYE
CONCH_1474 +1445357 QKPILPSKPIDPDNPDSDVI-LSSDDLYQDTITNEIIADIISKKYNIPIYLLLDMLEDRLNYFNMNENQKVEFVAKYFLGGDKTQALEVIQSLNFILAYE +1445654
CA..4_0012 +754 NNGLSTASNDKFEANGLSvkntlvtntkkviknknDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVD +853
NNGLSTAS DKF+ NG K ++ T KN ND + L +LK LV+ ++ + DL Q +L I YN+YV +N+ + + D +LK ++D
CONCH_1474 +1445657 NNGLSTASKDKFKENGFIAKEEILKQTSNTAKNINDKINQLDNELKSLVISSDKYLKDLIVKQNKLNEIIKAYNNYVALINKGLANESDPEFITLKNQID +1445954
CA..4_0012 +854 RLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKGEFKNLALLT-PNLDEVIVNGNENEDYKKVSRQVANAQ-KQTPTF-------eyeenekeev +953
L S+ L IN+NQ+ L WQ T+ FK+ G F N+ L T P LD++ G ED K + + +QT +F EE E++EV
CONCH_1474 +1445957 VLMKDSQILADLINENQKELSIWQNNNNTE---NFKVVGAFANVILNTNPKLDQITEEGGGGEDPNKPELPDNDLEFEQTASFNLIGDETVEEEKEEKEV +1446254
CA..4_0012 +954 eeTALMQKGKICIVSDNFKTMNPCIV +979
EETA+MQK + CIVSDNFKTMNPC V
CONCH_1474 +1446257 EETAMMQKNRTCIVSDNFKTMNPCAV +1446332
CAQ16704_0012 vs: CPEL_1564 in LMG 23910 (Campylobacter peloridis LMG 23910, complete genome.)
Gene length: 3069bp / 1023aa PV: Yes
Function: hemagglutinin domain-containing proteinScore: 860.00 bits: 374.79 e-value: 0.000000
length: 529 gaps: 53 id: 286 positives: 321 coverage: 0.55 query coverage 0.61
CA..4_0012 +14 KKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTI +113
KKLTNHI LS I SLLFSP A LPSGGKFTHGT+G+IN+ GN M I G N VIQWGGGFNI K V FG N NYLNIAHGT KSTI
CPEL_1564 +1608487 KKLTNHILLSSIVASLLFSPAFA-----LPSGGKFTHGTSGTINVSGNNMHIHGNKV--NSVIQWGGGFNINKGESVNFG--GNSKNYLNIAHGTNKSTI +1608784
CA..4_0012 +114 AGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPN-KLGNVVNMGNIKADNITLQGNKVVL------GS +213
AG+LNA GNNVFLINPNGVIITKTG INANRFVASTSSM M FANM F G SFSPVFKPN K GNV+NMGNI A+++ L GNKV++
CPEL_1564 +1608187 AGILNASGNNVFLINPNGVIITKTGNINANRFVASTSSMSNDDMNKFANMKTFEQGASFSPVFKPNPKGGNVINMGNINANDVLLIGNKVLIQGYLNTKD +1608484
CA..4_0012 +214 ENYNNINKV---MAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKI--------SGNNNFKKDAYVGIGSDVDWWHF +313
+ +N I + NI L GNE+Y D+A+ + L + AK KG YLNA GYYYNP SF F I N NF YVGIGSDVDWWHF
CPEL_1564 +1607887 KTFNQIKAIDEGKKANIHLVGNEIYADIATF--KDIGKLYITAKDKGSLYLNATGYYYNPSSFKDFDFIVKNYNGINHNNTNFSNMKYVGIGSDVDWWHF +1608184
CA..4_0012 +314 AKGWNENKAGFRTSASEYRLTKDIDFGGN------NNKNYANYCIDGLG--------CTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVG +413
AKGWNE FRT A EYRL DIDF N +NYANY +D G TSMI+ N FTKTFDGQGYTLKNINIDT+ L +VG
CPEL_1564 +1607587 AKGWNEYNNDFRTIANEYRLINDIDFQANCKNGVCTGQNYANYWVDLNGDGIKQDNEFTSMIIN---GNYFTKTFDGQGYTLKNINIDTTKLKYNPSHVG +1607884
CA..4_0012 +414 IFGYINDATIKNINVDYMGGGIRTNTYaggfagsasgtfsnislnnignisgnsngDQS-fvagfagfaggtfSNISLNNIGDISGYHA---GGFAGWLA +513
IFG I +TIKN+NVDYMGGGI+ + + + N+ S S G SNISLNNIGDIS GGFAG+L
CPEL_1564 +1607287 IFGAIT-STIKNVNVDYMGGGIKAKSVGYLGGFVGLSYAGALLNISLSNMGYFSFTGGSFIGGFAGSLQDGIHSNISLNNIGDISVNNVTFMGGFAGYLQ +1607584
CA..4_0012 +514 -GIFTNISLHDIGNISGNKSHGIAGGFAG +542
GI++NISL +IG+IS N GGFAG
CPEL_1564 +1606987 DGIYSNISLNNIGDISVNNVDS-TGGFAG +1607071
Score: 1023.00 bits: 445.10 e-value: 0.000000
length: 489 gaps: 32 id: 274 positives: 338 coverage: 0.55 query coverage 0.61
CA..4_0012 +454 SNISLNNIGDIS-----GY----HAGGFAGWLAGI-FTNISLHDIGNISGNKS-----HGIAGGFAGSY-ENDSTFKNIYIFFNPNAKISGRA--PGKFF +553
NISL IG+I GY H G F ++ + F+NI L +IGNI H AGGF G E D+ F+NI+IFFNPN KI GKFF
CPEL_1564 +1606927 CNISLEKIGNINRIAYNGYEENSHVGAFIARVSKVDFSNIYLKNIGNIFNEAKKNDFLHATAGGFIGYLMEGDTKFENIFIFFNPNIKIINETGLSGKFF +1607224
CA..4_0012 +554 GQ--PFWTAHLNNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKAntisrptppsnpttppnltdtnVKLDENDLHQNIVNEII +653
G T NNIHIYH DL NA D+NYWG TNDKIQIHTY + Q+S Y+DFLSKANTI +PT P P+ V L +DL+++IV++II
CPEL_1564 +1606627 GALNDKATYTFNNIHIYHHEKDLANATADKNYWGSTNDKIQIHTYADKTQESVYKDFLSKANTIEKPTIPNKPSDND------VILASDDLYKDIVDKII +1606924
CA..4_0012 +654 NDITNNH-----YEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSvkntlvtntkkvik +753
D+ N Y + + NLL+MLK+K NY+NM E QK F+AKYFL G+ TKALEVVQSLDFLLAYE NGLSTAS DKF+A L +KNTL+ NT KVIK
CPEL_1564 +1606327 TDLYNSNTDKKIYNLYLVNLLDMLKDKANYSNMSENQKVEFVAKYFLSGDKTKALEVVQSLDFLLAYEKNGLSTASKDKFDAEALNLKNTLLANTNKVIK +1606624
CA..4_0012 +754 nknDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSN +853
NKNDL +FL DLKNL+++ NQ + LK +QEQLK AI KYNDYVKK+NENPS+KN+ATL SLKAEVDRL NLS EL +I +NQ L+TWQ + S SN
CPEL_1564 +1606027 NKNDLSNFLENDLKNLLINSNQALASLKLSQEQLKIAITKYNDYVKKINENPSIKNEATLASLKAEVDRLSNLSGELATTIANNQIKLETWQKQASDKSN +1606324
CA..4_0012 +854 NHFKIKGEFKNLALLTPNLDEV-IVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIVRSF +942
+F I G+F N+AL PNL+++ G EN+DY+K+SRQ+A +QKQTPTF+YEE E +E++E AL Q+ + CIVSDNFKTMNPC+V S+
CPEL_1564 +1605727 QQFNIIGKFDNIALTIPNLEKLNNSSGIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIDEAALTQRARTCIVSDNFKTMNPCVVESY +1605991
CAQ16704_0012 vs: CAQ16704_1181 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3141bp / 1047aa PV: No
Function: hemagglutination domain proteinScore: 801.00 bits: 349.34 e-value: 0.000000
length: 418 gaps: 48 id: 239 positives: 269 coverage: 0.59 query coverage 0.68
CA..4_0012 +15 KLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTIA +114
KLT HI LSGITVSLLFSPLMA LPSGGKFTHGTTGSININGNTMNING VIQWGGGF I + V FG G N NYLNIAHGTSKSTIA
CA..4_1181 +1152497 KLTHHIILSGITVSLLFSPLMA-----LPSGGKFTHGTTGSININGNTMNINGHKVSS--VIQWGGGFSINQGESVNFG-GSN-KNYLNIAHGTSKSTIA +1152794
CA..4_0012 +115 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSENYNNINK +214
GLLNANGNNVFLINPNGVIITKTGTINANRFV STSS++ A + + +FSPVFKPNKLGNVVNMGNI AD + L GNKV + N+N
CA..4_1181 +1152197 GLLNANGNNVFLINPNGVIITKTGTINANRFVVSTSSLNN-ADYTTFKNLTYENAHTFSPVFKPNKLGNVVNMGNINADKVLLIGNKVDIQGGKLGNVNS +1152494
CA..4_0012 +215 VMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKIS-------------GNNNFKKDAYVG-----IGSDVDWWHFA +314
L GN VY+D S + N+ +NV A G N + + Y F ++ I G NNFKK +G +W +FA
CA..4_1181 +1151897 TT----HLVGNNVYIDADSANLNST--INVTAIQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFYFA +1152194
CA..4_0012 +315 KGWNENKAGFRTSASEYRLTKDIDFGGNNN--------KNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGYIND +414
KGWNE G S E+RL ++DF GN +NYANYC++GLGCTSMIV F KTFDGQGYTLKNINIDT+SLS + + VGIFG N+
CA..4_1181 +1151597 KGWNE-YIGDTQSVDEFRLVGNVDFSGNKGQGVEGRDWQNYANYCLNGLGCTSMIV-----TSFAKTFDGQGYTLKNINIDTTSLSNKPDNVGIFGSTNN +1151894
CA..4_0012 +415 ATIKNINVDYMGGGIRTN +432
ATIKNINVDYMGGGIR N
CA..4_1181 +1151297 ATIKNINVDYMGGGIRAN +1151348
Score: 1027.00 bits: 446.83 e-value: 0.000000
length: 492 gaps: 64 id: 284 positives: 321 coverage: 0.59 query coverage 0.68
CA..4_0012 +454 SNISLNNIGDISGY------------HAGGFAGWLAGIFTNISLHDIGNIS----GNKSHGIAGGFAGSYENDSTFKNIYIFFNPNAKISGRA-----PG +553
SNISLNNIGDIS +AGGFAG +G FTNISL +IGNIS GN + AGGFAG + DS FKNIY+FFNPN IS G
CA..4_1181 +1150742 SNISLNNIGDISSSGGNGGNGEFGRSQAGGFAGEASGTFTNISLNNIGNISTSSRGNGNYIYAGGFAGEADSDSIFKNIYVFFNPNMSISASGGNYNYAG +1151039
CA..4_0012 +554 KFFGQPFWTA-HLNNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSK----AntisrptppsnpttppnltdtnVKLDEND-LHQ +653
KFFG+ + T +NIHIYH NDLTNA D+NYWGNTNDKIQIHTY + NQ +Y F + A I + + P+ P T+ +V L +D +
CA..4_1181 +1150442 KFFGKGYFTGTNPDNIHIYHHTNDLTNATYDQNYWGNTNDKIQIHTYTDKNQ--AYNQFKQQDNTIARPIVQLPSITPPSNPSTPTNPDVILGSDDVISA +1150739
CA..4_0012 +654 NIVNEIINDITNNHYEINIANLLNMLKEKTNYTNMNEE--QKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSvkntlvtntk +753
N +N + +I Y I+I +L + + EE Q F+ + + + LE D+ Y N +F N
CA..4_1181 +1150142 NDLNTWLGEILAGNYWIDINDL-------SSIKGISEELKQSISFLEALYGQEGMKEILEGFGN-DYKTNYRNY-------QRFATN------------- +1150439
CA..4_0012 +754 kviknknDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTS +853
K +L F+ LK LV N+ DLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTS
CA..4_1181 +1149842 -----KANLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTS +1150139
CA..4_0012 +854 TDSNNHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIVRSF +945
TDSNNHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPC+ SF
CA..4_1181 +1149542 TDSNNHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +1149815
Score: 125.00 bits: 57.74 e-value: 0.000000
length: 124 gaps: 21 id: 56 positives: 64 coverage: 0.59 query coverage 0.68
CA..4_0012 +454 SNISLNNIGDISGYH--------AGGFAGWL-AGIFTNISLHDIGNISGNKSHGIAGGFAGSY---ENDSTFKNIYIFFNPNAKISGR----APGKFFGQ +553
SNISLNNIG IS AGGFAG +G +TNISL +IGNIS N S G+ G FAG + D TF NI + N SG G F GQ
CA..4_1181 +1151150 SNISLNNIGSISSRGVYDHDFIIAGGFAGRTDSGTYTNISLNNIGNISSNSS-GLDGDFAGGFAGQATDGTFSNISLSNIGNISTSGANWNNYVGGFAGQ +1151447
CA..4_0012 +554 P---FWTAHLNNIHIYHSR-NDLT +577
F LNNI SR ND++
CA..4_1181 +1150850 ASGTFSNISLNNIGNISSRGNDIS +1150919
Score: 106.00 bits: 49.54 e-value: 0.000001
length: 100 gaps: 15 id: 42 positives: 51 coverage: 0.59 query coverage 0.68
CA..4_0012 +454 SNISLNNIGDIS------GYHAGGFAGWL-AGIFTNISLHDIGNISGNKSHG----IAGGFAGSYENDS----TFKNIYIFFNPNAKISGRAPGKFFGQP +553
SNISLNNIG IS G AGGFAG +G F+NISL +IG IS + IAGGFAG + + + NI + + G G F GQ
CA..4_1181 +1151252 SNISLNNIGSISTIGNDNGGLAGGFAGRADSGTFSNISLNNIGSISSRGVYDHDFIIAGGFAGRTDSGTYTNISLNNIGNISSNSSGLDGDFAGGFAGQA +1151549
CAQ16704_0012 vs: CAQ16704_0538 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2913bp / 971aa PV: No
Function: hemagglutination domain proteinScore: 863.00 bits: 376.08 e-value: 0.000000
length: 586 gaps: 64 id: 303 positives: 341 coverage: 0.61 query coverage 0.65
CA..4_0012 +15 KLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTIA +114
KLT HI LSGITVSLLFSPLMA LPSGGKFTHGTTG+ININGNTMNING VIQWGGGF I + V FG G N NYLNIAHGTSKSTIA
CA..4_0538 +508748 KLTHHIILSGITVSLLFSPLMA-----LPSGGKFTHGTTGTININGNTMNINGHKVSS--VIQWGGGFSINQGESVNFG-GSN-KNYLNIAHGTSKSTIA +509045
CA..4_0012 +115 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSENYNNINK +214
GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKP K GNVVNMGNI AD + L GNKV + K
CA..4_0538 +509048 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSAAMQNFANMNNFNDGLSFSPVFKPSKAGNVVNMGNINADKVLLIGNKVDIQG------GK +509345
CA..4_0012 +215 VMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKIS-------------GNNNFKKDAYVG-----IGSDVDWWHFA +314
+ L GN VY+D S + N+ +NV A G N + + Y F + I G NNFKK +G +W +FA
CA..4_0538 +509348 LGNSTTHLVGNNVYIDADSANLNST--INVTAIQGGYIQRQMNKFANDGYNFGNNTNIQNTNYTETNGQTHIGSNNFKKALTIGNMENEKANATEWFYFA +509645
CA..4_0012 +315 KGWNENKAGFRTSASEYRLTKDIDFGGNNN--------KNYANYCIDGLGCTSMIVGYDA---YNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGY +414
KGWNE+K G+ E+RL ++DF GN +NYANYC+ CT MIVG++ Y GF KTFDGQGYTLKNINIDT+SLS + YVGIFG
CA..4_0538 +509648 KGWNEDK-GYTRNVDEFRLVGNVDFSGNKGQGVEGRDWQNYANYCLSAGNCTNMIVGHNENFYYGGFNKTFDGQGYTLKNINIDTTSLSNKPRYVGIFGG +509945
CA..4_0012 +415 INDATIKNINVDYMGGGIRTNTYaggfagsasgtfsnislnnignisgnsngDQSfvagfagfaggtfSNISLNNI-----GDISGYH-AGGFAGWL-AG +514
+ AT KNINVDYMGGGI+TN Y N N G+ G G G + NI GDIS GGF G++
CA..4_0538 +509948 VLGATFKNINVDYMGGGIKTNNYGHVGGFVGYAISGSTFSNISLNNIGDISSSGGSNGGNVGGFTGYAESATFSNISLNNIGDISSSSFVGGFIGYVYES +510245
CA..4_0012 +515 IFTNISLHDIGNISGNKSHG-IAGGFAGSYENDSTFKNIYI----FFNPNAKISGRAPGKFFGQP----FWTAHLNNIHIYHSRND +600
TNISL +IG+IS N G AGGF G Y +TF NI + + G G F G+ F LNNI S ND
CA..4_0538 +510248 TLTNISLNNIGDISSNSVGGSYAGGFTG-YAVAATFSNISLNNIGNISSSNSVGGSYAGGFTGHAESATFSNISLNNIGNISSVND +510503
Score: 1032.00 bits: 448.99 e-value: 0.000000
length: 482 gaps: 52 id: 294 positives: 330 coverage: 0.61 query coverage 0.65
CA..4_0012 +454 SNISLNNIGDIS------GYHAGGFAGWL-AGIFTNISLHDIGNISG-NKSHGIAGGFAG---SYENDS-TFKNIYIFFNPNAKISGRA----PGKFFGQ +553
SNISLNNIG+IS G +AGGF G + F+NISL +IGNIS N S AGGFAG ++ S TFKNIYIFFNPN IS GKFFG+
CA..4_0538 +510299 SNISLNNIGNISSSNSVGGSYAGGFTGHAESATFSNISLNNIGNISSVNDSGSFAGGFAGYIYTFGTSSLTFKNIYIFFNPNMSISASGNYIYAGKFFGK +510596
CA..4_0012 +554 PFWTAHLNNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKAntisrptppsnpttppnltdtnVKLDEND-LHQNIVNEIINDI +653
T L+NIHIYH NDL NA D+NYWG +NDKIQIHTYNNSNQ+S YQDFLSK NTISRPTPP+NP+TP N T+ +V L +D + N +N + +I
CA..4_0538 +510599 GDFTGTLDNIHIYHHTNDLANATYDQNYWGSSNDKIQIHTYNNSNQESFYQDFLSKVNTISRPTPPTNPSTPSNPTNPDVILGSDDVISANDLNTWLREI +510896
CA..4_0012 +654 TNNHYEINIANLLNMLKEKTNYTNMNEE--QKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSvkntlvtntkkviknknDLF +753
Y I+I +L + + EE Q F+ + + + LE D+ Y N +F N K +L
CA..4_0538 +510899 LAGNYWIDINDL-------SSIKGISEELKQSISFLEALYGQEGMKEILEGFGN-DYKTNYRNY-------QRFATN------------------KANLL +511196
CA..4_0012 +754 DFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIK +853
F+ LK LV N+ DLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASIN+NQ LLQTWQ KTS DSNNHFKI
CA..4_0538 +511199 AFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKII +511496
CA..4_0012 +854 GEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIVRSF +935
GEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPC+ SF
CA..4_0538 +511499 GEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +511742
CAQ16704_0012 vs: CAQ16704_1535 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3009bp / 1003aa PV: No
Function: hemagglutination domain proteinScore: 992.00 bits: 431.73 e-value: 0.000000
length: 412 gaps: 33 id: 285 positives: 306 coverage: 0.58 query coverage 0.63
CA..4_0012 +15 KLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTIA +114
KLT HI LSGITVSLLFSPLMA LPSGGKFTHGTTG+ININGNTMNING VIQWGGGF I + V FG G N NYLNIAHGTSKSTIA
CA..4_1535 +1511359 KLTHHIILSGITVSLLFSPLMA-----LPSGGKFTHGTTGTININGNTMNINGHKVSS--VIQWGGGFSINQGESVNFG-GSN-KNYLNIAHGTSKSTIA +1511656
CA..4_0012 +115 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSE-NYNN-- +214
GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMD MQNFANMNNFNDGLSFSPVFKPNKLGNVVNMGNI A+ + L GNKV+L S N N
CA..4_1535 +1511659 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDNTTMQNFANMNNFNDGLSFSPVFKPNKLGNVVNMGNINANKVLLIGNKVLLQSSFNTKNKT +1511956
CA..4_0012 +215 INKVMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKISG---------NNNFKKDAYVGIGSDVDWWHFAKGWNEN +314
N++ A NI L GNE++ D+A++ + L + AK KG YLNA GYYYNP SFS F N NF YVGIGSDVDWWHFAKGWNEN
CA..4_1535 +1511959 FNQIKASNIHLVGNEIHADIATLK--DINKLYITAKDKGSLYLNATGYYYNPSSFSHFNNYESKAYNGINHNNTNFSNMRYVGIGSDVDWWHFAKGWNEN +1512256
CA..4_0012 +315 KAGFRTSASEYRLTKDIDFGGNNN--------KNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGYINDATIKNI +414
KAGFRTSASEY+LT DIDF GN +NYANYC+ CTSMIVG+ N F KTFDGQGYTLKNINID +SLS + EYVGIFG I AT KNI
CA..4_1535 +1512259 KAGFRTSASEYKLTNDIDFKGNKGQGVEGRDWQNYANYCLSTYNCTSMIVGFS--NAFNKTFDGQGYTLKNINIDITSLSNKPEYVGIFGSIYGATFKNI +1512556
CA..4_0012 +415 NVDYMGGGIRTN +426
NVDYMGGGI+ N
CA..4_1535 +1512559 NVDYMGGGIKAN +1512592
Score: 1027.00 bits: 446.83 e-value: 0.000000
length: 483 gaps: 58 id: 292 positives: 326 coverage: 0.58 query coverage 0.63
CA..4_0012 +454 SNISLNNIGDISGY--------HAGGFAGWLA-GIFTNISLHDIGNISGNKSHGI--AGGFAGSYENDSTFKNIYIFFNPNAKISGRA-----PGKFFGQ +553
SNISLNNIG+IS +AGGFAG G F+NISL +IGNIS A GFAG +STFKNIYIFFNPN IS GKFFG
CA..4_1535 +1513018 SNISLNNIGNISSSGGSRYTRSQAGGFAGNAGYGTFSNISLNNIGNISASVDNNFVSAAGFAGIITVNSTFKNIYIFFNPNMSISASGNWQNYIGKFFGY +1513315
CA..4_0012 +554 PFWTAHL--NNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKAntisrptppsnpttppnltdtnVKLDENDLHQNIVNEIIND +653
+ L +N+HIYH NDL NA D+NYWG +NDKIQIHTYNNSNQ+ YQDFLSKANTISRPTPP+NP+ P + ++ + NDL N + +
CA..4_1535 +1513318 INGSPNLTFDNVHIYHHTNDLANATYDQNYWGSSNDKIQIHTYNNSNQENVYQDFLSKANTISRPTPPTNPSNPDVILGSDDVISANDL-----NTWLGE +1513615
CA..4_0012 +654 ITNNHYEINIANLLNMLKEKTNYTNMNEE--QKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSvkntlvtntkkviknknDL +753
I Y I+I +L + + EE Q F+ + + + LE S D+ + Y N +F N K +L
CA..4_1535 +1513618 ILAGNYWIDINDL-------SSIKGISEELKQSISFLEALYGQEGMKEILEGF-SNDYKINYRNY-------QRFATN------------------KANL +1513915
CA..4_0012 +754 FDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKI +853
F+ LK LV N+ DLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKI
CA..4_1535 +1513918 LAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKI +1514215
CA..4_0012 +854 KGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIVRSF +936
KGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPC+ SF
CA..4_1535 +1514218 KGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +1514464
CAQ16704_0012 vs: CAQ16704_0923 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2625bp / 875aa PV: Yes
Function: hemagglutination domain proteinScore: 1077.00 bits: 468.40 e-value: 0.000000
length: 617 gaps: 86 id: 334 positives: 379 coverage: 0.56 query coverage 0.54
CA..4_0012 +13 YKKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKST +112
YKKL+ +I LS I SLLFS A LPSGGKFTHGTTG+ININGNTMNING VIQWGGGF I + V F G N NYLNIAHGTSKST
CA..4_0923 +894746 YKKLSKQILLSNIVASLLFSSTFA-----LPSGGKFTHGTTGTININGNTMNINGHKVSS--VIQWGGGFSINQGESVNF-NGSN-KNYLNIAHGTSKST +895043
CA..4_0012 +113 IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSENYNNI +212
IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSS++ A + + +FSPVFKPNKLGNVVNMGNIKA+N+ L GNKV + N
CA..4_0923 +895046 IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNN-ADYTTFKNLTYENAHTFSPVFKPNKLGNVVNMGNIKANNVLLIGNKVDIQGGKLGNA +895343
CA..4_0012 +213 NKVMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKISGNN--------------NFKKDAYVG-----IGSDVDWW +312
N L GN VY+D S + N+ +NV A G N + + Y F+ I N NFKK +G +W
CA..4_0923 +895346 NSTT----HLVGNNVYIDADSANLNST--INVTAIQNGYIQRQMNKFANDNYNFTNNVNINKVNYTDSANTTHNGISSNFKKVLTIGNMENEKANATEWF +895643
CA..4_0012 +313 HFAKGWNENKAGFRTSASEYRLTKDIDFGGNNNKNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGYINDATIKN +412
+FAKGWNE G+ S E+RL ++DF GN +NYANYCIDGLGCTSMIVG+ N F KTFDGQGYTLKNINIDTSSL + +VGIFG N+AT KN
CA..4_0923 +895646 YFAKGWNE-SIGYTQSVDEFRLVGNVDFSGNQGQNYANYCIDGLGCTSMIVGFS--NTFDKTFDGQGYTLKNINIDTSSLNNKPYFVGIFGSTNNATFKN +895943
CA..4_0012 +413 INVDYMGGGIRTNTYaggfagsasgtfsnislnnignisgnsngDQSfvagfagfaggtfSNISLNNIGDISG-----YHAGGFAGWLAGIFTNISLHDI +512
INVDYMGGGI+T D + V GFAG+A GTFSNISLNNIG+IS + GGFAG GIF+NISL +I
CA..4_0923 +895946 INVDYMGGGIKT-------------------------------TDGARVGGFAGYASGTFSNISLNNIGNISNSGKYDSYTGGFAGFAYGIFSNISLNNI +896243
CA..4_0012 +513 GNISGNKSH-GIAGGFAGSYEN--DSTFKNIYIFFNPNAKISGRAPGKFFGQPFWTAH--LNNIHIYHSRNDLTNAITDRNYW------GNTNDKIQIHT +612
GNIS S+ AGGFAGS TFKNIYIFFNPN IS GKFFG + +A +N+HIYH DLTNA D YW G +KI IHT
CA..4_0923 +896246 GNISSSNSYDARAGGFAGSINSFLSITFKNIYIFFNPNMSISIDG-GKFFGDKYGSANPTFDNVHIYHHVSDLTNANNDNSYWNDFNTNGYVSNKINIHT +896543
CA..4_0012 +613 YNNSNQQSSYQDFLSKA +629
YNNSNQ+S YQDFLSKA
CA..4_0923 +896546 YNNSNQESVYQDFLSKA +896594
Score: 683.00 bits: 298.44 e-value: 0.000000
length: 185 gaps: 3 id: 160 positives: 165 coverage: 0.56 query coverage 0.54
CA..4_0012 +732 DLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHF +831
+L F+ LK LV N+ DLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASIN+NQ LLQTWQ KTS DSNNHF
CA..4_0923 +896756 NLLAFINDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHF +897053
CA..4_0012 +832 KIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIVRSF +916
KI GEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALM ICIVSDNFKTMNPC+VRSF
CA..4_0923 +897056 KIIGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALML---ICIVSDNFKTMNPCVVRSF +897308
CAQ16704_0012 vs: CAQ16704_0852 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 2979bp / 993aa PV: No
Function: hemagglutination domain proteinScore: 844.00 bits: 367.89 e-value: 0.000000
length: 535 gaps: 52 id: 276 positives: 316 coverage: 0.66 query coverage 0.71
CA..4_0012 +15 KLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKSTIA +114
KLT HI LSGITVSLLFSPLMA LPSGGKFTHGTTG+ININGNTMNING VIQWGGGF I + V FG G N NYLNIAHGTSKSTIA
CA..4_0852 +823461 KLTHHIILSGITVSLLFSPLMA-----LPSGGKFTHGTTGTININGNTMNINGHKVSS--VIQWGGGFSINQGESVNFG-GSN-KNYLNIAHGTSKSTIA +823758
CA..4_0012 +115 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSENYNNINK +214
GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSS++ A + + +FSPVFKP KLGNVVNMGNI AD + L GNKV + N N
CA..4_0852 +823161 GLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNN-ADYTTFKNLTYENAHTFSPVFKPSKLGNVVNMGNINADKVLLIGNKVDIQGGKLGNANS +823458
CA..4_0012 +215 VMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKI-------------SGNNNFKKDAYVG-----IGSDVDWWHFA +314
L GN VY+D S + N+ +NV A G N + + Y F ++ I G NNFKK +G +W +FA
CA..4_0852 +822861 TT----HLVGNNVYIDADSANLNST--INVTAIQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFYFA +823158
CA..4_0012 +315 KGWNENKAGFRTSASEYRLTKDIDFGGNNNKNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGYINDATIKNINV +414
KGWNENK G+ S E+RL ++DF GN +NYANYC+ CTSMIVGY N FTKTFDGQGYTLKNINIDT+SL + +VGIFG +AT KNINV
CA..4_0852 +822561 KGWNENK-GYTRSVDEFRLVGNVDFSGNQGQNYANYCLSTYNCTSMIVGYQN-NIFTKTFDGQGYTLKNINIDTTSLNNKPYFVGIFGGTRNATFKNINV +822858
CA..4_0012 +415 DYMGGGIRTNTYaggfagsasgtfsnislnnignisgnsngDQSfvagfagfaggtfSNISLNNIGDISGYHA--------GGFAGWLA---GIFTNISL +514
DYMGGGI+ N + + NI S GTF NISLNNI I+ +A GGFAG+ G F NISL
CA..4_0852 +822261 DYMGGGIKVNGGEYVGGFAGGTLNGTFNNISLNNIGDISSSSSYVGGFIGYVYDGTFGNISLNNIYSITNIYASSTSNVYTGGFAGYAGSTNGTFYNISL +822558
CA..4_0012 +515 HDIGNISGNKSHGI----AGGFAGSYENDSTFKNI +549
+IG IS S + GGFAG + T+ NI
CA..4_0852 +821961 NNIGSISNSASDSVFYVYTGGFAGR-TDSGTYTNI +822063
Score: 983.00 bits: 427.85 e-value: 0.000000
length: 480 gaps: 55 id: 288 positives: 322 coverage: 0.66 query coverage 0.71
CA..4_0012 +454 SNISLNNIGDISGY-----HAGGFAGWLA-GIFTNISLHDIGNISGNKSHGIAGGFAGSYENDSTFKNIYIFFNPNAKISGRAPGKFFGQPFWTAHL--N +553
+NISLNNIGDIS Y H+ GFAG + G FTNISL +IGNI N ++GGF G ++STFKNIYIFFNPN IS GKFFG + A L +
CA..4_0852 +821823 TNISLNNIGDISNYGSASHHSSGFAGSIGYGSFTNISLNNIGNINSNFNR-LSGGFVGYVNDNSTFKNIYIFFNPNMSIS-IDGGKFFGVKYSNANLTFD +822120
CA..4_0012 +554 NIHIYHSRNDLTNAITDRNYW------GNTNDKIQIHTYNNSNQQSSYQDFLSKAntisrptppsnpttppnltdtnVKLDEND-LHQNIVNEIINDITN +653
N+HIYH DLTNA D YW G +KI IHTYN SNQQS YQDFLSKANTISRPTPP+NP+ P N V L +D + N ++ + +I
CA..4_0852 +821523 NVHIYHHVSDLTNANNDNSYWNDFNTNGYVSNKINIHTYNRSNQQSFYQDFLSKANTISRPTPPTNPSNPTNPD---VILGSDDVISANDLDTWLGEILA +821820
CA..4_0012 +654 NHYEINIANLLNMLKEKTNYTNMNEE--QKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSvkntlvtntkkviknknDLFDF +753
Y I+I N LN +K + EE Q F+ + + + LE D+ Y N +F N K +L F
CA..4_0852 +821223 GNYWIDI-NDLNSIK------GISEELKQSISFLEALYGQEGMKEILEGFGN-DYKTNYRNY-------QRFATN------------------KANLLAF +821520
CA..4_0012 +754 LSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSNNHFKIKGE +853
+ LK LV N+ DLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASIN+NQ LLQTWQ KTS DSNNHFKI GE
CA..4_0852 +820923 INDKLKPLVKQSNKAFIDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINNNQVLLQTWQNKTSNDSNNHFKIIGE +821220
CA..4_0012 +854 FKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIVRSF +933
FKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPC+ SF
CA..4_0852 +820623 FKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQKGKICIVSDNFKTMNPCVTGSF +820860
Score: 304.00 bits: 134.95 e-value: 0.000000
length: 187 gaps: 47 id: 88 positives: 101 coverage: 0.66 query coverage 0.71
CA..4_0012 +454 SNISLNNIGDISGYHA------GGFAGWLAGIFTNISLHDIGNIS--GNKSH------------------------------GIAGGFAGSYENDSTFKN +553
+NISLNNIGDI + GGF GW G +TNISL +IG+IS G SH ++GGF G ++STFKN
CA..4_0852 +821922 TNISLNNIGDIYSHNGSQISSTGGFTGWANGTYTNISLNNIGDISNYGSASHHSSGFAGSIGYGSFTNISLNNIGNINSNFNRLSGGFVGYVNDNSTFKN +822219
CA..4_0012 +554 IYIFFNPNAKISGRAPGKFFGQPFWTAHL--NNIHIYHSRNDLTNAITDRNYW------GNTNDKIQIHTYNNSNQQSSYQDFLSKA +640
IYIFFNPN IS GKFFG + A L +N+HIYH DLTNA D YW G +KI IHTYN SNQQS YQDFLSKA
CA..4_0852 +821622 IYIFFNPNMSIS-IDGGKFFGVKYSNANLTFDNVHIYHHVSDLTNANNDNSYWNDFNTNGYVSNKINIHTYNRSNQQSFYQDFLSKA +821880
CAQ16704_0012 vs: CAQ16704_1287 in RM16704 (Campylobacter sp. RM16704, complete genome.)
Gene length: 3186bp / 1062aa PV: Yes
Function: hemagglutination domain proteinScore: 772.00 bits: 336.83 e-value: 0.000000
length: 418 gaps: 48 id: 232 positives: 264 coverage: 0.65 query coverage 0.75
CA..4_0012 +13 YKKLTNHIYLSGITVSLLFSPLMAINPNQLPSGGKFthgttgsiningntmningttpnKNHVIQWGGGFNIGKDAQVHFGKGQNGHNYLNIAHGTSKST +112
YKKL+ +I LS I SLLFS A LPSGGKFTHGTTG+ININGNTMNING VIQWGGGF I + V F G N NYLNIAHGTSKST
CA..4_1287 +1266072 YKKLSKQILLSNIVASLLFSSTFA-----LPSGGKFTHGTTGTININGNTMNINGHKVSS--VIQWGGGFSINQGESVNF-NGSN-KNYLNIAHGTSKST +1266369
CA..4_0012 +113 IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSMDSaamqnfanmnnfnDGLSFSPVFKPNKLGNVVNMGNIKADNITLQGNKVVLGSENYNNI +212
IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSS++ A + + +FSPVFKPNKLGNVVNMGNIKAD + L GNKV + N
CA..4_1287 +1265772 IAGLLNANGNNVFLINPNGVIITKTGTINANRFVASTSSLNN-ADYTTFKNLTYENAHTFSPVFKPNKLGNVVNMGNIKADKVLLIGNKVDIQGGKLGNA +1266069
CA..4_0012 +213 NKVMAKNIKLEGNEVYVDVASIDGNTLQGLNVDAKTKgnaylnangyyynPYSFSVFSKIS-------------GNNNFKKDAYVG-----IGSDVDWWH +312
N L GN VY+D S + N+ +NV A G N + + Y F ++ I G NNFKK +G +W +
CA..4_1287 +1265472 NSTT----HLVGNNVYIDADSANLNST--INVTATQNGYIQRQMNKFANDNYNFGNYTNIQNTNYTETNGQTHNGSNNFKKVLTIGNMENEKANATEWFY +1265769
CA..4_0012 +313 FAKGWNENKAGFRTSASEYRLTKDIDFGGNNN--------KNYANYCIDGLGCTSMIVGYDAYNGFTKTFDGQGYTLKNINIDTSSLSSESEYVGIFGYI +412
FAKGWNE G S E+RL ++DF GN +NYANYC++GLGCTSMIV F KTFDGQGYTLKNINIDTSSLS + +VGIFG
CA..4_1287 +1265172 FAKGWNE-YIGDTQSVDEFRLVGNVDFSGNKGQGVEGRDWQNYANYCLNGLGCTSMIV-----TSFAKTFDGQGYTLKNINIDTSSLSNKPYFVGIFGST +1265469
CA..4_0012 +413 NDATIKNINVDYMGGGIR +430
N+ATIKNINVDYMGGGI+
CA..4_1287 +1264872 NNATIKNINVDYMGGGIK +1264923
Score: 1601.00 bits: 694.43 e-value: 0.000000
length: 485 gaps: 28 id: 417 positives: 430 coverage: 0.65 query coverage 0.75
CA..4_0012 +454 SNISLNNIGDISGY------HAGGFAGW-LAGIFTNISLHDIGNISGNKS-----HGIAGGFAGSYENDST-----FKNIYIFFNPNAKIS---GRA--P +553
SNISLNNIG+ISG +AGGFAG+ + G F+NISL +IGNIS S AGGF G ND T F+NIYIFFNPN IS GR
CA..4_1287 +1264410 SNISLNNIGNISGSGLTSVSYAGGFAGYAIDGTFSNISLNNIGNISSSNSNYGGSESYAGGFIGYIYNDDTSSIITFENIYIFFNPNMSISASGGRQNYI +1264707
CA..4_0012 +554 GKFFGQPFWTAH---LNNIHIYHSRNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKAntisrptppsnpttppnltdtnVKLDENDLHQNI +653
GKFFG+ + T N+HIYH NDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKANTISRPTPPSNPTTPPNLTDTNVKLDENDLHQNI
CA..4_1287 +1264110 GKFFGRGYFTGANPTFTNVHIYHHTNDLTNAITDRNYWGNTNDKIQIHTYNNSNQQSSYQDFLSKANTISRPTPPSNPTTPPNLTDTNVKLDENDLHQNI +1264407
CA..4_0012 +654 VNEIINDITNNHYEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSvkntlvtntkkvik +753
VNEIINDITNNHYEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSVKNTLVTNTKKVIK
CA..4_1287 +1263810 VNEIINDITNNHYEINIANLLNMLKEKTNYTNMNEEQKANFIAKYFLKGNTTKALEVVQSLDFLLAYENNGLSTASNDKFEANGLSVKNTLVTNTKKVIK +1264107
CA..4_0012 +754 nknDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLNNLSKELFASINDNQELLQTWQSKTSTDSN +853
NKNDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRL+NLSKELFASIN+NQELLQTWQSKTSTDSN
CA..4_1287 +1263510 NKNDLFDFLSGDLKNLVVDYNQNITDLKTAQEQLKTAIAKYNDYVKKVNENPSLKNDATLNSLKAEVDRLDNLSKELFASINNNQELLQTWQSKTSTDSN +1263807
CA..4_0012 +854 NHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFeyeenekeeveeTALMQKGKICIVSDNFKTMNPCIV +938
NHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQ ICIVSDNFKTMNPC+V
CA..4_1287 +1263210 NHFKIKGEFKNLALLTPNLDEVIVNGNENEDYKKVSRQVANAQKQTPTFEYEENEKEEVEETALMQ---ICIVSDNFKTMNPCVV +1263462
Score: 111.00 bits: 51.70 e-value: 0.000000
length: 72 gaps: 9 id: 38 positives: 43 coverage: 0.65 query coverage 0.75
CA..4_0012 +454 SNISLNNIGDIS------GY-HAGGFAGWLAGI-FTNISLHDIGNISGNKSHGI-AGGFAGSYENDSTFKNI +525
SNISLNNIGDIS G+ + GGFAG + F+NISL +I ISG I AGGF G Y TF NI
CA..4_1287 +1264827 SNISLNNIGDISSSSSSVGFSYIGGFAGNAGDVSFSNISLNNISSISGSGYRDIRAGGFVGGYAYRGTFSNI +1265040