CHL_1051 vs: CR44_04865 in pet-3 (Campylobacter fetus subsp. testudinum strain pet-3, complete genome.)
Gene length: 1922bp / 640aa PV: Yes
Function: No annotation data

Score: 389.00 bits: 171.62 e-value: 0.000000
length: 160 gaps: 4 id: 88 positives: 115 coverage: 0.51 query coverage 0.53

CHL_1051 +1 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSQYKNEYKERFFQT----QYGALIFKKDEFLNFLDLRLLSFSYTSFSNKIGLGVSEKRFLK +100
++ + L+ DI+ F TLLNA+SLAISND +IL FLL +S++KNEYK+ FF+ + IFK++ F FLD R+L SYT++SNKIGL + +F+K
CR44_04865 +988739 VMDSNELLNDIECKFKTLLNAKSLAISNDSKILSFLLTESKFKNEYKDMFFEIHKSNEQNIAIFKQNAFFEFLDTRVLGNSYTAYSNKIGLTNAINKFIK +989036

CHL_1051 +101 NSENVVLNFPFKDCVLKGAQSKDDEKNTELFFNNILAKSEIDVLFAPKVLNKFELIGGGD +160
E VVL FPFKD V+KG+QSKD++K E+FFNNIL KSEIDVLFA K L FELI +
CR44_04865 +989039 SNEQVVLSFPFKDGVIKGSQSKDEDKTNEIFFNNILDKSEIDVLFAKKALYNFELISADE +989216

Score: 956.00 bits: 416.20 e-value: 0.000000
length: 486 gaps: 56 id: 241 positives: 293 coverage: 0.51 query coverage 0.53

CHL_1051 +166 NLLIKGNNLIALHSLKEYFRHQSEQNKVKLIYIDPPYNTGSDSFNYNDRFNHSTYLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGREN +265
NLLIKGNNL+ALH LKE F NKVKLIYIDPPYNT DSFNYNDRF HST+LTFMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGREN
CR44_04865 +989263 NLLIKGNNLLALHCLKERF-----ANKVKLIYIDPPYNTSNDSFNYNDRFSHSTWLTFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGREN +989560

CHL_1051 +266 FVSCSI-FEKVKIRKNSAKYFSESHEYILIFSKHKE-----NWN-----------RNLLPRKDTSGYKNPDNDPRGVWIPVPIHANHVYEADYKITKPNG +365
FV+C I + R+ S+ + SHEYIL +SK ++ N R L RK SG D + P+ N
CR44_04865 +989563 FVACFIPLMNPRGRQESSYPIARSHEYILCYSKKEDLATFFNFGIIKNDEINDEFRLLSLRK--SGNASLRKDRPNMFYPIFYNTN------------TQ +989860

CHL_1051 +366 VVLEKPKNNSWRLSEENFKKHVEENRIWWGKDNSYPMIKKFLSE---------------VQDGLVP---RTIFYYDETGGGPAGDKALKDLFEGNKVFDN +465
+ K +N+ ++ K EE R W K N I + + V+DG F D+ + ++ LF N++F
CR44_04865 +989863 SIYTKQRNDKSEITIYPIKTNAEEGRWRWQKSNVENNINLLVCKENSKGEYDIYVKDYIVKDGQTKGEKTKTFIIDKNIINDKAKEHMEILFGRNELFSY +990160

CHL_1051 +466 PKPEKLLEQILEISTQENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIESITKERLKKVIEGEQGGISKAVSWSGGGNLIYCELASLNAKFIEKIEN +565
PK E L+++I+EISTQEND+V+DFFAGSGTTLAVA KM R++IGIEQM+YI++IT ERLKKVI GEQGGISKAV W GGGN IY EL LNA F +KI N
CR44_04865 +990163 PKSEFLMQRIIEISTQENDIVMDFFAGSGTTLAVAMKMNRKFIGIEQMDYIKTITCERLKKVIAGEQGGISKAVGWNGGGNFIYSELMPLNATFKDKIIN +990460

CHL_1051 +566 SSDENELNQIYENLQKLAFIDYRVDIKNDLKDDEFSNLDFTSKKRILKKCLDRNMDYIPYADIKDSEYKIDEQTRVLNDIFYKGGN +651
+ +ENELNQIY+ L+ AF+DYRV+ D D+EF L KK+ L +D+NMDY+ + DI+D Y IDE +N FY N
CR44_04865 +990463 AKNENELNQIYDELKAKAFLDYRVEF--DKFDEEFNKLSLEDKKKNLLLTMDKNMDYVLFDDIEDKNYNIDENCIKINKAFYGQNN +990718

CHL_1051 vs: CHH_1055 in LMG 9260 (Campylobacter hyointestinalis subsp. hyointestinalis LMG 9260, complete genome.)
Gene length: 1941bp / 647aa PV: Yes
Function: type III restriction/modification system, mod subunit

Score: 2061.00 bits: 892.86 e-value: 0.000000
length: 649 gaps: 34 id: 460 positives: 499 coverage: 0.71 query coverage 0.74

CHL_1051 +1 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSQYKNEYKERFFQTQYGALIFKKDEFLNFLDLRLLSFSYTSFSNKIGLGVSEKRFLKNSEN +100
MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKS +KNEYKERFFQTQYGALIFKKDEFLNFLDLRLLS SYTSFSNKIGLG SEK+FLKNS+N
CHH_1055 +995785 MIKEDSLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSSFKNEYKERFFQTQYGALIFKKDEFLNFLDLRLLSHSYTSFSNKIGLGASEKKFLKNSQN +996082

CHL_1051 +101 VVLNFPFKDCVLKGAQSKDDEKNTELFFNNILAKSEIDVLFAPKVLNKFELIGGGD---LETTLKNRPNLLIKGNNLIALHSLKEYFRHQSEQNKVKLIY +200
VVLNFPFKDCVLKG+QSKDD+K TELFFNNILAKSEIDVLF+PKVLN FELIGGG LE LKN+PNLLIKGNNLIALH+LKE+F HQSEQNKVKLIY
CHH_1055 +996085 VVLNFPFKDCVLKGSQSKDDDKSTELFFNNILAKSEIDVLFSPKVLNNFELIGGGQNDTLENVLKNKPNLLIKGNNLIALHTLKEHFHHQSEQNKVKLIY +996382

CHL_1051 +201 IDPPYNTGSDSFNYNDRFNHSTYLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCSIFEKVKIRKNSAKYFSESHEYILIFSK +300
IDPPYNTGSDSFNYNDRFNHS++LTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSC + S+ + ++ H Y L ++K
CHH_1055 +996385 IDPPYNTGSDSFNYNDRFNHSSWLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCFVCVSAPAGTQSSVFVAQQHNYCLSYAK +996682

CHL_1051 +301 HKEN---WNRNLLPRKDTSGYKNPD-------------------NDPRGVWIPVPI--HANHVYEADYKITKPNGVVL----EKPKNNSWRLSEENFKKH +400
K N L ++ YK D D + PV + ++ D N + + K W S E K
CHH_1055 +996685 NKNSLKLFNIKLTEQELKEKYKEKDEYGNFYSERIWKRGEGGRMEDVPSLHFPVYYDKEQDKIFIDDENSNTKNLIKIIPYQTKGVLGRWTWSREKMKNE +996982

CHL_1051 +401 VEENRIWWGKDNSYPMIKKFLSEVQDGLVPRTIFYYDETGGGPAGDKALKDLFEGNKVFDNPKPEKLLEQILEISTQENDLVLDFFAGSGTTLAVAHKMK +500
+ R+ +N Y + KK S G +P +I D G +K++F +KVF PK EKLL+ ILEIST ENDLVLDFFAGSGTTLAVAHKMK
CHH_1055 +996985 RHKLRVKIV-NNEYVLHKKLYSHEDKGKLPNSIITSD-IARTELGSLEIKEIF-NDKVFSYPKSEKLLQYILEISTNENDLVLDFFAGSGTTLAVAHKMK +997282

CHL_1051 +501 RRYIGIEQMEYIESITKERLKKVIEGEQGGISKAVSWSGGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDDEFSNLD +600
RRYIGIEQMEYI+SITKERLKKVIEGEQGGISKAV W GGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKD EFSNLD
CHH_1055 +997285 RRYIGIEQMEYIKSITKERLKKVIEGEQGGISKAVNWQGGGNLIYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDMEFSNLD +997582

CHL_1051 +601 FTSKKRILKKCLDRNMDYIPYADIKDSEYKIDEQTRVLNDIFYKGGNDE +649
F KKRILKKCLDRNMDYIPYADI D EYKIDEQTR+LN IFYKGGNDE
CHH_1055 +997585 FIEKKRILKKCLDRNMDYIPYADIDDREYKIDEQTRILNGIFYKGGNDE +997729

CHL_1051 vs: CIG11343_0145 in RM11343 (Campylobacter iguaniorum strain RM11343, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: type III restriction/modification system, mod subunit

Score: 1392.00 bits: 604.28 e-value: 0.000000
length: 640 gaps: 44 id: 341 positives: 417 coverage: 0.53 query coverage 0.55

CHL_1051 +6 SLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSQYKNEYKERFFQTQYGA-----LIFKKDEFLNFLDLRLLSFSYTSFSNKIGLGVSEKRFLKNSEN +105
+L+ D++ F +LL R LA++ +L FLL+ S +K Y E FF TQ+ L FK+ EFL FL+LR+L S+T+FSNKI L +K +K+ E
CI..3_0145 +132276 ALLDDLETRFGSLLGVRNLAVARKDELLSFLLDGSAFKARYLELFF-TQHKLNGREFLEFKEKEFLQFLNLRVLGTSFTAFSNKIALASDDKLIIKD-EK +132573

CHL_1051 +106 VVLNFPFKDCVLKGAQSKDDEKNTELFFNNILAKSEIDVLFAPKVLNKFELI------GGGDLETTLKNRPNLLIKGNNLIALHSLKEYFRHQSEQNKVK +205
+VLNFPFKD V+KGAQSKD+ K ELFFN+ILA+ EID LF PK L F+LI G G+L++ LKN PNLLIKGNNL+ALH+LK + + +VK
CI..3_0145 +131976 IVLNFPFKDGVIKGAQSKDESKTNELFFNDILARDEIDALFRPKALQNFKLITPAFARGNGNLKSALKNTPNLLIKGNNLLALHTLK---KRKDIYGQVK +132273

CHL_1051 +206 LIYIDPPYNTGSDSFNYNDRFNHSTYLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCSIFEKVKIRKNSAKYFSESHEYILI +305
LIYIDPPYNTG DSFNYND+FNHS++L FMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFV C + + N YF+ +YILI
CI..3_0145 +131676 LIYIDPPYNTGNDSFNYNDKFNHSSWLCFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVGCVAWRRTDNQPNIG-YFARVKDYILI +131973

CHL_1051 +306 FSKHKENWNRNLLPRKDTSGYKNPDNDPRGVWIPVPI----HANHVYEADYKITKPNGVVLEKPKNNSWRLSEENFKKHVEENRIWWG-KDNSYPMIKKF +405
FSK K N N +P + + + D +G + H Y+ KITK G LE P W ++EE F + N I+W K + P K +
CI..3_0145 +131376 FSKNKINLKFNKMPLTEKAKKEYRYQDEKGYFRRAILLDKTRGRHFYK---KITKL-GNELEGP----WMVTEEKFDEMNANNEIYWTEKGDGQPYGKIY +131673

CHL_1051 +406 LSEVQDGLVPRTIFYYDETGGGPAGDKALKDLFEGNKVFDNPKPEKLLEQILEISTQENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIESITKERL +505
L + +V F+ + G L+ F +VF PKPE LL++ILEIST ENDLVLDFFAGSGTTLAVAHKMKRR+IGIEQM+YIESITKERL
CI..3_0145 +131076 LDNAKGQIVND--FWDIDVGTNQGASLELEKTF-SKRVFSFPKPEPLLQRILEISTNENDLVLDFFAGSGTTLAVAHKMKRRWIGIEQMDYIESITKERL +131373

CHL_1051 +506 KKVIEGEQGGISKAVSWSG------GGNL-----IYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDDEFSNLDFTSKKRILK +605
KVIEGEQGGISKAV W G L IYCEL LNA F E+I+ DE EL +IY++LQ+ AF+DYRVDIK LKD EF L+ KKRIL
CI..3_0145 +130776 IKVIEGEQGGISKAVGWNPLFPSLMDGELPKNEFIYCELMPLNAVFKEQIKALNDESELERIYKDLQEKAFVDYRVDIKEMLKDKEFEALNLDEKKRILH +131073

CHL_1051 +606 KCLDRNMDYIPYADIKDSEYKIDEQTRVLNDIFYKGGNDE +645
LD NMDY+ Y DIKD + + + LN F+KGG DE
CI..3_0145 +130476 MVLDSNMDYVLYDDIKDEDLGVSSELVELNREFFKGGEDE +130593

CHL_1051 vs: CIG11343_0014 in RM11343 (Campylobacter iguaniorum strain RM11343, complete genome.)
Gene length: 1923bp / 641aa PV: No
Function: type III restriction/modification system, mod subunit

Score: 1392.00 bits: 604.28 e-value: 0.000000
length: 640 gaps: 44 id: 341 positives: 417 coverage: 0.53 query coverage 0.55

CHL_1051 +6 SLISDIKEHFNTLLNARSLAISNDKRILEFLLEKSQYKNEYKERFFQTQYGA-----LIFKKDEFLNFLDLRLLSFSYTSFSNKIGLGVSEKRFLKNSEN +105
+L+ D++ F +LL R LA++ +L FLL+ S +K Y E FF TQ+ L FK+ EFL FL+LR+L S+T+FSNKI L +K +K+ E
CI..3_0014 +15893 ALLDDLETRFGSLLGVRNLAVARKDELLSFLLDGSAFKARYLELFF-TQHKLNGREFLEFKEKEFLQFLNLRVLGTSFTAFSNKIALASDDKLIIKD-EK +16190

CHL_1051 +106 VVLNFPFKDCVLKGAQSKDDEKNTELFFNNILAKSEIDVLFAPKVLNKFELI------GGGDLETTLKNRPNLLIKGNNLIALHSLKEYFRHQSEQNKVK +205
+VLNFPFKD V+KGAQSKD+ K ELFFN+ILA+ EID LF PK L F+LI G G+L++ LKN PNLLIKGNNL+ALH+LK + + +VK
CI..3_0014 +15593 IVLNFPFKDGVIKGAQSKDESKTNELFFNDILARDEIDALFRPKALQNFKLITPAFARGNGNLKSALKNTPNLLIKGNNLLALHTLK---KRKDIYGQVK +15890

CHL_1051 +206 LIYIDPPYNTGSDSFNYNDRFNHSTYLTFMKNRLEIARELLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVSCSIFEKVKIRKNSAKYFSESHEYILI +305
LIYIDPPYNTG DSFNYND+FNHS++L FMKNRLEIARE LRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFV C + + N YF+ +YILI
CI..3_0014 +15293 LIYIDPPYNTGNDSFNYNDKFNHSSWLCFMKNRLEIAREFLRDDGVIFVQCDDNEQAYLKVLMDEIFGRENFVGCVAWRRTDNQPNIG-YFARVKDYILI +15590

CHL_1051 +306 FSKHKENWNRNLLPRKDTSGYKNPDNDPRGVWIPVPI----HANHVYEADYKITKPNGVVLEKPKNNSWRLSEENFKKHVEENRIWWG-KDNSYPMIKKF +405
FSK K N N +P + + + D +G + H Y+ KITK G LE P W ++EE F + N I+W K + P K +
CI..3_0014 +14993 FSKNKINLKFNKMPLTEKAKKEYRYQDEKGYFRRAILLDKTRGRHFYK---KITKL-GNELEGP----WMVTEEKFDEMNANNEIYWTEKGDGQPYGKIY +15290

CHL_1051 +406 LSEVQDGLVPRTIFYYDETGGGPAGDKALKDLFEGNKVFDNPKPEKLLEQILEISTQENDLVLDFFAGSGTTLAVAHKMKRRYIGIEQMEYIESITKERL +505
L + +V F+ + G L+ F +VF PKPE LL++ILEIST ENDLVLDFFAGSGTTLAVAHKMKRR+IGIEQM+YIESITKERL
CI..3_0014 +14693 LDNAKGQIVND--FWDIDVGTNQGASLELEKTF-SKRVFSFPKPEPLLQRILEISTNENDLVLDFFAGSGTTLAVAHKMKRRWIGIEQMDYIESITKERL +14990

CHL_1051 +506 KKVIEGEQGGISKAVSWSG------GGNL-----IYCELASLNAKFIEKIENSSDENELNQIYENLQKLAFIDYRVDIKNDLKDDEFSNLDFTSKKRILK +605
KVIEGEQGGISKAV W G L IYCEL LNA F E+I+ DE EL +IY++LQ+ AF+DYRVDIK LKD EF L+ KKRIL
CI..3_0014 +14393 IKVIEGEQGGISKAVGWNPLFPSLMDGELPKNEFIYCELMPLNAVFKEQIKALNDESELERIYKDLQEKAFVDYRVDIKEMLKDKEFEALNLDEKKRILH +14690

CHL_1051 +606 KCLDRNMDYIPYADIKDSEYKIDEQTRVLNDIFYKGGNDE +645
LD NMDY+ Y DIKD + + + LN F+KGG DE
CI..3_0014 +14093 MVLDSNMDYVLYDDIKDEDLGVSSELVELNREFFKGGEDE +14210