Class a: All alpha proteins Class e: Multi-domain proteins (alpha and beta) Class i: Low resolution protein structures
Class b: All beta proteins Class f: Membrane and cell surface proteins and peptides Class j: Peptides
Class c: Alpha and beta proteins (a/b) Class g: Small proteins Class k: Designed proteins
Class d: Alpha and beta proteins (a+b) Class h: Coiled coil proteins SCOP Classes with more than 5 compatible hydrophobic patterns

Class: Alpha and beta proteins (a/b)

Folds

  • (Phosphotyrosine protein) phosphatases II
  • 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
  • 7-stranded beta/alpha barrel
  • Aconitase iron-sulfur domain
  • Activating enzymes of the ubiquitin-like proteins
  • Adenine nucleotide alpha hydrolase-like
  • ALDH-like
  • Alkaline phosphatase-like
  • alpha/beta knot
  • alpha/beta-Hydrolases
  • Amidase signature (AS) enzymes
  • Aminoacid dehydrogenase-like, N-terminal domain
  • Anticodon-binding domain-like
  • AraD-like aldolase/epimerase
  • Archaeal malate dehydrogenase-like
  • Arginase/deacetylase
  • ATC-like
  • Barstar-like
  • BRCT domain
  • Carbamate kinase-like
  • Caspase-like
  • Cell-division inhibitor MinC, N-terminal domain
  • Chelatase-like
  • ClpP/crotonase
  • CoA transferase
  • CoA-dependent acyltransferases
  • CoA-transferase family III (CaiB/BaiF)
  • Cobalt precorrin-4 methyltransferase CbiF
  • Cryptochrome/photolyase, N-terminal domain
  • Cysteine hydrolase
  • Cytidine deaminase-like
  • DegV-like
  • DFP DNA/pantothenate metabolism flavoprotein
  • DHH phosphoesterases
  • DHS-like NAD/FAD-binding domain
  • Dihydrofolate reductases
  • Dipeptide transport protein
  • DNA glycosylase
  • D-Tyr tRNAtyr deacylase, DTD
  • FabD/lysophospholipase-like
  • FAD/NAD(P)-binding domain
  • Fe-only hydrogenase
  • Ferredoxin reductase-like, C-terminal NADP-linked domain
  • Flavodoxin-like
  • Formate dehydrogenase/DMSO reductase, domains 1-3
  • Formyltransferase
  • GckA/TtuD-like
  • Glutaminase/Asparaginase
  • Glycerol-3-phosphate (1)-acyltransferase
  • HAD-like
  • Hypothetical protein MT938 (MTH938)
  • Hypothetical protein MTH777 (MT0777)
  • IIA domain of mannose transporter, IIA-Man
  • Initiation factor IF2/eIF5b, domain 3
  • Isocitrate/Isopropylmalate dehydrogenases
  • Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
  • L-fucose isomerase, N-terminal and second domains
  • Lumazine synthase
  • Macro domain-like
  • Methylesterase CheB, C-terminal domain
  • Methylglyoxal synthase-like
  • Molybdenum cofactor biosynthesis proteins
  • MurCD N-terminal domain
  • MurD-like peptide ligases, peptide-binding domain
  • MurF and HprK N-domain-like
  • NAD(P)-binding Rossmann-fold domains
  • Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
  • Nucleoside hydrolase
  • Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • Nucleotide-binding domain
  • Nucleotide-diphospho-sugar transferases
  • Outer arm dynein light chain 1
  • PEP carboxykinase N-terminal domain
  • PEP carboxykinase-like
  • Periplasmic binding protein-like I
  • Periplasmic binding protein-like II
  • PFL-like glycyl radical enzymes
  • Phosphofructokinase
  • Phosphoglucomutase, first 3 domains
  • Phosphoglycerate kinase
  • Phosphoglycerate mutase-like
  • Phosphorylase/hydrolase-like
  • Phosphosugar isomerase
  • Phosphotyrosine protein phosphatases I-like
  • PIN domain-like
  • P-loop containing nucleoside triphosphate hydrolases
  • PLP-dependent transferases
  • PreATP-grasp domain
  • PRTase-like
  • PTS IIb component
  • Pyruvate kinase C-terminal domain-like
  • Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
  • Resolvase-like
  • Restriction endonuclease-like
  • Rhodanese/Cell cycle control phosphatase
  • Ribokinase-like
  • Ribonuclease H-like motif
  • Ribose/Galactose isomerase RpiB/AlsB
  • Ribosomal protein L13
  • Ribosomal protein L4
  • Ribosomal proteins L15p and L18e
  • S-adenosyl-L-methionine-dependent methyltransferases
  • SIS domain
  • SpoIIaa-like
  • Subtilisin-like
  • SurE-like
  • The "swivelling" beta/beta/alpha domain
  • Thiamin diphosphate-binding fold (THDP-binding)
  • Thiamin pyrophosphokinase, catalytic domain
  • Thiolase-like
  • Thioredoxin fold
  • TIM beta/alpha-barrel
  • TK C-terminal domain-like
  • Tryptophan synthase beta subunit-like PLP-dependent enzymes
  • Tubulin/Dihydroxyacetone kinase nucleotide-binding domain
  • UDP-Glycosyltransferase/glycogen phosphorylase
  • Undecaprenyl diphosphate synthase
  • Uroporphyrinogen III synthase (U3S, HemD)
  • vWA-like
  • YchN-like
  • YjeF N-terminal domain-like


    Class a: All alpha proteins Class e: Multi-domain proteins (alpha and beta) Class i: Low resolution protein structures
    Class b: All beta proteins Class f: Membrane and cell surface proteins and peptides Class j: Peptides
    Class c: Alpha and beta proteins (a/b) Class g: Small proteins Class k: Designed proteins
    Class d: Alpha and beta proteins (a+b) Class h: Coiled coil proteins