Class a: All alpha proteins Class e: Multi-domain proteins (alpha and beta) Class i: Low resolution protein structures
Class b: All beta proteins Class f: Membrane and cell surface proteins and peptides Class j: Peptides
Class c: Alpha and beta proteins (a/b) Class g: Small proteins Class k: Designed proteins
Class d: Alpha and beta proteins (a+b) Class h: Coiled coil proteins SCOP Classes with more than 5 compatible hydrophobic patterns

Class: Designed proteins

Folds

  • alpha2d
  • Alpha-t-alpha, a de novo designed peptide
  • Amphiphilic (amphipathic) alpha helix
  • Artificial ankyrin repeat proteins
  • beta-hairpin design
  • Beta-sheet designs
  • Calmodulin
  • Coiled serine
  • Collagen-like peptides
  • Designed four helix bundle protein
  • Designed heterodimeric leucine zipper
  • Designed single chain three-helix bundle
  • Designed trimeric coiled-coil peptide
  • Erythropoietin (EPO) mimetic peptides
  • Glytm1bzip
  • Hybrid and chimeric proteins
  • IFN mimetic syr6
  • IL-1 receptor type 1 antagonist peptide AF10847
  • Inhibitor of mammalian ribonucleotide reductase
  • Integrin-binding RGD peptide
  • Mimochrome, heme-binding design
  • Octreotide (Sandostatine), a somatostatine analogue
  • Peptide antagonists of IGF-1
  • Peptide f (amphiphilic octadecapeptide)
  • Protein A Ig(Fc)-binding domain mimics
  • Prototype WW domain
  • PW2, a tryptophan-rich anticocidial peptide
  • Retro-GCN4 leucine zipper
  • RH4 designed right-handed coiled coil tetramer
  • Scorpion toxin-based designs
  • Synthetic high affinity IgE receptor antagonists
  • TAZ (CH) Zn-binding domain based design
  • TH (toxin hand)-motif beta-sheet mini-protein designs
  • Thermostable heterotrimeric coiled coil
  • TPR domain-based design
  • Trp-cage miniprotein
  • VaLd trimeric coiled-coil
  • Zinc finger based beta-beta-alpha motif
  • Zinc finger design


    Class a: All alpha proteins Class e: Multi-domain proteins (alpha and beta) Class i: Low resolution protein structures
    Class b: All beta proteins Class f: Membrane and cell surface proteins and peptides Class j: Peptides
    Class c: Alpha and beta proteins (a/b) Class g: Small proteins Class k: Designed proteins
    Class d: Alpha and beta proteins (a+b) Class h: Coiled coil proteins