Clicking on the HCA plots will open the relevant PDB entry
Class a: All alpha proteins Class e: Multi-domain proteins (alpha and beta) Class i: Low resolution protein structures
Class b: All beta proteins Class f: Membrane and cell surface proteins and peptides Class j: Peptides
Class c: Alpha and beta proteins (a/b) Class g: Small proteins Class k: Designed proteins
Class d: Alpha and beta proteins (a+b) Class h: Coiled coil proteins SCOP Classes with more than 5 compatible hydrophobic patterns

Class: Membrane and cell surface proteins and peptides

Folds

  • (Pro)aerolysin, pore-forming lobe
  • 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • ABC transporter involved in vitamin B12 uptake, BtuC
  • Anthrax protective antigen
  • Aquaporin-like
  • Bacterial photosystem II reaction centre, L and M subunits
  • Calcium ATPase, transmembrane domain M
  • Clc chloride channel
  • Cytochrome c oxidase subunit III-like
  • Cytochrome c oxidase subunit I-like
  • F1F0 ATP synthase subunit A
  • Family A G protein-coupled receptor-like
  • Gated mechanosensitive channel
  • Head and neck region of the ectodomain of NDV fusion glycoprotein
  • Heme-binding four-helical bundle
  • Integral outer membrane protein TolC, efflux pump component
  • Leukocidin (pore-forming toxin)
  • Light-harvesting complex subunits
  • Lipovitellin-phosvitin complex; beta-sheet shell regions
  • Mechanosensitive channel protein MscS (YggB), transmembrane region
  • Multidrug efflux transporter AcrB transmembrane domain
  • Multidrug resistance ABC transporter MsbA, N-terminal domain
  • Neurotransmitter-gated ion-channel pransmembrane pore
  • Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • Perfringolysin
  • Photosystem I reaction center subunit X, PsaK
  • Photosystem I reaction center subunit XI, PsaL
  • Photosystem I subunits PsaA/PsaB
  • Single transmembrane helix
  • Small-conductance potassium channel
  • Toxins' membrane translocation domains
  • Transmembrane beta-barrels
  • Transmembrane helix hairpin
  • Viral glycoprotein, central and dimerisation domains
  • Voltage-gated potassium channels

    Clicking on the HCA plots will open the relevant PDB entry
    Class a: All alpha proteins Class e: Multi-domain proteins (alpha and beta) Class i: Low resolution protein structures
    Class b: All beta proteins Class f: Membrane and cell surface proteins and peptides Class j: Peptides
    Class c: Alpha and beta proteins (a/b) Class g: Small proteins Class k: Designed proteins
    Class d: Alpha and beta proteins (a+b) Class h: Coiled coil proteins SCOP Classes with more than 5 compatible hydrophobic patterns