FastQCFastQC Report
mer. 21 févr. 2018
190216G8R06_GCCAAT_L005_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename190216G8R06_GCCAAT_L005_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22904996
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAACATGCGCGCGAGTCGTTGGGTAGTACGAAACCCGAAGGCGAAGTGA412280.17999566557444496No Hit
CTACGAATGATTTGGCACCGCCACGTCGCATGGGGTGAATATCGTCCCGG318260.13894785225022524No Hit
AGGGAATCGGGTTAATATTCCCGAACCTGGACACGGAGAAAGGTCCTTTG304590.13297972197855876No Hit
CCCGTCTGTCCCTCTTAATCATTACCTCGTGTTCCGAAAACCAGCAAAAT254950.11130759420346548No Hit
CTTCGATTCAGAACGGACTTCTCCTATCTCTTAGGACCGACTGACCCATG251050.10960490890284375No Hit

[OK]Adapter Content

Adapter graph