FastQCFastQC Report
mer. 21 févr. 2018
190216G3R012_CTTGTA_L005_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename190216G3R012_CTTGTA_L005_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32878807
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA803650.24442796844788192No Hit
CTCCTGTTCTTTTTTTTTCTCTCTTGCTTCTCTTTTTTTCTTCCATCTTT465730.14165051669910042No Hit
GTAAACTCGACCTTCGACTTACCAAAAGCCTTCACTTTTTTCCTGTATCT408510.12424720884793661No Hit

[OK]Adapter Content

Adapter graph