FastQCFastQC Report
mer. 21 févr. 2018
220415G3R012_CTTGTA_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename220415G3R012_CTTGTA_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26735401
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGTTCTTTTTTTTTCTCTCTTGCTTCTCTTTTTTTCTTCCATCTTT436730.1633527022841363No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA428970.16045018363479943No Hit
GTAAACTCGACCTTCGACTTACCAAAAGCCTTCACTTTTTTCCTGTATCT357740.13380760587806406No Hit
CCTGTATCTATCATCGTCTTTTTCTCTTCTTTTTTTCACTCTTTTTTTTT284860.10654786887243622No Hit

[OK]Adapter Content

Adapter graph