FastQCFastQC Report
mer. 21 févr. 2018
190216G10R014_AGTTCC_L005_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename190216G10R014_AGTTCC_L005_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26914966
Sequences flagged as poor quality0
Sequence length126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA358720.13327900915795324No Hit
CTCCTGTTCTTTTTTTTTCTCTCTTGCTTCTCTTTTTTTCTTCCATCTTT311040.11556395798530825No Hit
CTTTTCTGGATTTTGCTTTTTAGTCGACCCCTCCGCTCACTACTTCCTTT288360.10713741938221287No Hit

[OK]Adapter Content

Adapter graph