Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.95%DateMon Feb 25 17:28:45 GMT 2019
Rank79Aligned Residues252
% Identity15%Templatec3fm0A_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:protein ciao1; PDBTitle: crystal structure of wd40 protein ciao1
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.... .....110.... .....120.........130....... ..140....
Predicted Secondary structure 







.



..










....






Query SS confidence 












.









. .






















. . . .






Query Sequence  MSKMQWLNLPSTE. PLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVED. . . . SDGELQR
Query Conservation 
 
 








. 








.. 




 










 

  ....
 
 
  
Alig confidence 












.









..






















....






Template Conservation 

 

  
 

    
  
 




  




 
  
 


               
   
Template Sequence  SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRT
Template Known Secondary structure 


STTS

TTSS
TTS
TT
SS
SS
Template Predicted Secondary structure 



























Template SS confidence 



























































   4.....10.........20.........30.........40.........50.........60...
 
   145....150.........160.........170......... 180.........190
Predicted Secondary structure 



























..............





Query SS confidence 


































. . . . . . . . . . . . . .










Query Sequence  RTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . . AAVCSSSVVAV
Query Conservation    


 
 

  
 


  

 
  



 

  
..............   







Alig confidence 


































..............










Template Conservation 
  
  
                                                     
Template Sequence  VRKVAWSPCGNYLASASFDATTCIWKKNQDFECVTTLEGHENEVKSVAWAPSGNLLATCS
Template Known Secondary structure 
TTSSTTS






SS

TTSS
Template Predicted Secondary structure 





















































Template SS confidence 



























































   64.....70.........80.........90.........100.........110.........120...
 
   191........200......... 210....
Predicted Secondary structure 












....................................




Query SS confidence 


















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




Query Sequence  CDSRAMVWDVKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSV
Query Conservation 

 










 

  ....................................
  
 
Alig confidence 


















....................................




Template Conservation                                                              
Template Sequence  RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW
Template Known Secondary structure  TTS

TTS




S

SSSS
TTS
TT
Template Predicted Secondary structure 



























































Template SS confidence 



























































   125....130.........140.........150.........160.........170.........180....
 
   215....220.........230.........240.........250.........260......
Predicted Secondary structure 





























........
Query SS confidence 



















































. . . . . . . .
Query Sequence  DSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSL. . . . . . . .
Query Conservation    
 

 


  
 















 












  



 
........
Alig confidence 






















.



























........
Template Conservation                         .                                    
Template Sequence  VCCATLEGHESTVWSLAFDPSGQ. RLASCSDDRTVRIWRQYLPGNEQGVACSPSWKCICT
Template Known Secondary structure 


SS

TTSS.TTS

TT
TT





Template Predicted Secondary structure 






















.































Template SS confidence 



























































   185....190.........200....... ..210.........220.........230.........240...
 
   267..270.........280.........290.........300...... ...310......
Predicted Secondary structure  .





















.........



Query SS confidence  .







































. . . . . . . . .









Query Sequence  . PARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPST. . . . . . . . . AVRTIPSLHG
Query Conservation  .
 

   
 





 

 





 









 
 
......... 



 



Alig confidence  .














.



















.


.........









Template Conservation          
       .      
 
 
  
 

   .                   
  
Template Sequence  LSGFHSRTIYDIAWCQ. LTGALATACGDDAIRVFQED. PNSDPQQPTFSLTAHLHQAHSQ
Template Known Secondary structure 
SS
SS

T.TT

TTS

.TTS
TTS

TTSSSS
Template Predicted Secondary structure 





.








.


















Template SS confidence 



























































   247..250.........260.. .......270.........280.. .......290.........300....
 
   317..320.........330.........340......
Predicted Secondary structure 













Query SS confidence 





























Query Sequence  DIMSLKYLKLHSDIIATGGVDGSVVLWNLR
Query Conservation   
 





 



















Alig confidence 





























Template Conservation   
  
  

     
 
 
 

 
 

   
Template Sequence  DVNCVAWNPKEPGLLASCSDDGEVAFWKYQ
Template Known Secondary structure 

SSSTTTTS

Template Predicted Secondary structure 










Template SS confidence 





























   305....310.........320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D