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Job Descriptionexo99____
Confidence98.60%DateMon Feb 25 17:28:45 GMT 2019
Rank289Aligned Residues220
% Identity11%Templatec3fw0A_
PDB info PDB header:lyaseChain: A: PDB Molecule:peptidyl-glycine alpha-amidating monooxygenase; PDBTitle: structure of peptidyl-alpha-hydroxyglycine alpha-amidating2 lyase (pal) bound to alpha-hydroxyhippuric acid (non-3 peptidic substrate)
Resolution2.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.... .....120.........130.........140.........150.........160....
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Query Sequence  SSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPP
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Template Sequence  HGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLL. . . . . . . . . . . . . . . . . ILGRSMQPG
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   585....590.........600.........610........ .620.......
 
   165....170.........180.........190.........200.........210.........220....
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Query Sequence  SKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQ
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Template Sequence  SDQNHFCQPTDVAVEPSTGA. VFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQF
Template Known Secondary structure  SSTT

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   628.630.........640....... ..650.........660.........670.........680......
 
   225....230.........240.........250........ .260.........270.........280
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Query Sequence  EPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKE. . . . GSTSKLSLPARRGCMARCADFN
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Template Sequence  SVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFA
Template Known Secondary structure  SSTTTTGGGTTTT



GGGTT
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   687..690.........700.........710.........720.........730.........740......
 
   281........290.........300.........310. ........320.........330.......
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Query Sequence  TLLPFALATASSDGIISVFDCRYPSTAVRTI. . . PSLHGDIMSLKYLKLHSDIIATGGVD
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Template Sequence  V. NGKPYFGDQEPVQGFVMNFS. SGEIIDVFKPVRKHFDMPHDIVASE. DGTVYIGDAHT
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   747 ..750.........760....... ..770.........780.........790.. .......800...
 
   338.340.......
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Query Sequence  GSVVLWNLRS
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Template Sequence  NTVWKFTLTE
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   804.....810...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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