Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank97Aligned Residues200
% Identity15%Templatec5h64b_
PDB info PDB header:transferaseChain: B: PDB Molecule:regulatory-associated protein of mtor; PDBTitle: cryo-em structure of mtorc1
Resolution4.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.... .....120.........130.........140.........150.......
Predicted Secondary structure 







..























Query SS confidence 














. .










































Query Sequence  LPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPV
Query Conservation 




 








.. 




 










 

  
 
 
    


 
 

  
Alig confidence 














..







.









........................
Template Conservation 
     
    
 
    



  
.

 


    ........................
Template Sequence  RKMFDSFISATVQTFTPCIAVADKD. SICFWDWEKG. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 













TTS.S


TTTT........................
Template Predicted Secondary structure 













.



........................
Template SS confidence 



























































   927..930.........940.........950. ........960.
 
   158.160.........170.........180.........190.........200.........210.......
Predicted Secondary structure 














































Query SS confidence 



























































Query Sequence  GDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSS
Query Conservation   


  

 
  



 

  
   









 










 

  
  
   
Alig confidence  ...


















....


























....


Template Conservation  ...  
  
  
   



 
 ....






 







        
 
....   
Template Sequence  . . . EKLDYFHPRYTRVTAMEYL. . . . NLLLTATDDGAIRVWKNFADLEKNAWQ. . . . GLS
Template Known Secondary structure  ...S







S




S
....




TTS

TT


S....
Template Predicted Secondary structure  ...






....








....


Template SS confidence 



























































   1055....1060.........1070... ......1080.........1090.........1100 ...
 
   218.220.........230.........240.........250.........260.........270.......
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  KNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCA
Query Conservation   

 


  
 















 












  



 

 

   
 

Alig confidence 



















.
























...










Template Conservation      
      
  
    
. 




 
  




  

  
  
...     
 



Template Sequence  DMLPTTRGAGMVVDWEQETG. LLMSSGDVRIVRIWDTDREMKVQDI. . . PTGADSCVTSL
Template Known Secondary structure 
SSS

SB



SSS
.

SSSSSSS


...



SS

Template Predicted Secondary structure 










.






...






Template SS confidence 



























































   1117..1120.........1130...... ...1140.........1150.........1160. ........1170..
 
   278.280.........290.........300.........310.........320.........330.......
Predicted Secondary structure 




























Query SS confidence 



























































Query Sequence  DFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVD
Query Conservation 



 

 





 









 
 
 



 



 
 





 










Alig confidence 



.



















...............



















Template Conservation      . 
  



  





 
  ...............
  
     
   




 
Template Sequence  SCDS. HRSLIVAGLGDGSIRVYDRW. . . . . . . . . . . . . . . VVKASLQKRPDGHIVSVSVN
Template Known Secondary structure 


S.SS
TTS


...............




SS








Template Predicted Secondary structure 

.








...............






Template SS confidence 



























































   1173... ...1180.........1190...... ...1200.........1210......
 
   338.340.........350.....
Predicted Secondary structure 












Query SS confidence 

















Query Sequence  GSVVLWNLRSLPTYRVGR
Query Conservation 









 


 
 
Alig confidence 

















Template Conservation 
 






    
 
  
Template Sequence  GDVRIFDPRMPESVNVLQ
Template Known Secondary structure  SSS

B



SSS

Template Predicted Secondary structure 








Template SS confidence 

















   1234.....1240.........1250.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D