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Job Descriptionexo99____
Confidence99.96%DateMon Feb 25 17:28:45 GMT 2019
Rank58Aligned Residues270
% Identity13%Templatec4h5jB_
PDB info PDB header:protein transportChain: B: PDB Molecule:guanine nucleotide-exchange factor sec12; PDBTitle: crystal structure of the guanine nucleotide exchange factor sec12 (p642 form)
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.....
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Query Sequence  HSDILPPATTAKVFSTAQLAAHHRENVLAIGLNPLSTSGACVGLLTMESAEAKLSGMSKM
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Template Sequence  EFALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVD
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   63......70.........80.........90.........100.........110.........120..
 
   96...100.........110.... .....120.........130.........140.........150.
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Query Sequence  QWLNLPSTEPLSSVEWCEG. . . . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCS
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Template Sequence  FDASTNADDYTKLVYISREGTVAAIASSKVPAIXRIIDPSDLTEKFEIETRGEVKDLHFS
Template Known Secondary structure  SS



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   123......130.........140.........150.........160.........170.........180..
 
   152.......160.........170.........180.........190.........200.........210.
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Query Sequence  EEQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWV
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Template Sequence  TDGKVV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYITGSSLEVISTVTGSC. . . . . . .
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   183..... .190.........200......
 
   212.......220.........230.........240.........250.........260 .......
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Query Sequence  PSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGS. . . . TSKLSLP
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Template Sequence  . . . IARKTDFDKNWSLSKINFIADDT. VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV
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   207..210.........220......... 230.........240.........250.........260..
 
   268.270.........280.........290.........300.........310.........320.......
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Query Sequence  ARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLH
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Template Sequence  TNRFKGITSXDVDX. KGELAVLASNDNSIALVKLKDLSXSKIFKQAHSFAITEVTISP. D
Template Known Secondary structure  SS
S

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   263......270...... ...280.........290.........300.........310......... 320
 
   328.330.........340.......
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Query Sequence  SDIIATGGVDGSVVLWNLRS
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Template Sequence  STYVASVSAANTIHIIKLPL
Template Known Secondary structure  S
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   321........330.........340
 
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No model constructed - rank, confidence too low




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