Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence98.05%DateMon Feb 25 17:28:45 GMT 2019
Rank303Aligned Residues284
% Identity14%Templatec4v0nH_
PDB info PDB header:hydrolase/structural proteinChain: H: PDB Molecule:bardet-biedl syndrome 1 protein; PDBTitle: crystal structure of bbs1n in complex with arl6dn, soaked with2 mercury
Resolution3.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130....
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  ACVGLLTMESAEAKLSGMSKMQWLNLPSTEPLSSVEWCEGSLLVGTSRGRIVVADVSPQT
Query Conservation    
 


 



  



 
 








 








 




 










 
Alig confidence 






























.......
















..


Template Conservation     

 
   
   
      
 
 

  

.......   



     
 


..
  
Template Sequence  RSVWLDAFNDPVAGISAYTPCVHTCNLFGDG. . . . . . . ENRLVIADEDRKLKIWK. . GTQ
Template Known Secondary structure 



TT





GGG
TTSSS.......SB
TTS..TT
Template Predicted Secondary structure 


















.......




..


Template SS confidence 



























































   37..40.........50.........60....... ..70.........80.... ...
 
   135....140......... 150.........160.........
Predicted Secondary structure 










.....
















....................
Query SS confidence 














. . . . .



















. . . . . . . . . . . . . . . . . . . .
Query Sequence  VEDSDGELQRRTCLV. . . . . CSEEQTPVGDIVVPPSKHAV. . . . . . . . . . . . . . . . . . . .
Query Conservation 
  
 
 
    


..... 
 

  
 


  

 
  ....................
Alig confidence 














.....



















....................
Template Conservation            
  
              



  
 
 

   

  
  

       
Template Sequence  KASEHPLLDTPVAICSYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEE
Template Known Secondary structure 
SS


BS

SS



TT
SSS









Template Predicted Secondary structure 
































Template SS confidence 



























































   88.90.........100.........110.........120.........130.........140.......
 
   170.........180.........190.........200.........210.........220...
Predicted Secondary structure  ......






































Query SS confidence  . . . . . .





















































Query Sequence  . . . . . . STLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNE
Query Conservation  ......



 

  
   









 










 

  
  
   
 

 

Alig confidence  ......

































...........








Template Conservation    


    
   
 
 

   




 

 
  
     ........... 

      
Template Sequence  TTVITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAGT. . . . . . . . . . . AIVKNIWVG
Template Known Secondary structure 


SSSS
SS
BTTT
SSTT...........

S
Template Predicted Secondary structure 



















...........

Template SS confidence 



























































   213......220.........230.........240.........250.. .......260.
 
   224.....230.. .......240.........250.........260.........270.........280..
Predicted Secondary structure 


.































Query SS confidence 








.

















































Query Sequence  QEPLLFAQW. VPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTL
Query Conservation 
  
 



.











 












  



 

 

   
 





 
Alig confidence 








.


































........





.
Template Conservation    
  
   
  
 
 



   

 

 

        
   
 ........ 
    .
Template Sequence  ITPAMIAVQGELDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQ. . . . . . . . PVGLVR.
Template Known Secondary structure  S
TTTTTSTT
S


SS
.........
Template Predicted Secondary structure 





















........
.
Template SS confidence 



























































   262.......270.........280.........290.........300...... ...310..
 
   283......290.........300.........310.........320.........330..... ....340.
Predicted Secondary structure 























.



Query SS confidence 




















































.





Query Sequence  LPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGG. VDGSVV
Query Conservation 

 





 









 
 
 



 



 
 





 








.





Alig confidence 




















































.





Template Conservation      
 
 



 
     


 


  
   
  
  
          
 


  
 
 
Template Sequence  LAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVR
Template Known Secondary structure 
SSSTTS
TTS

SS

TTS
TTS
Template Predicted Secondary structure 






















Template SS confidence 



























































   313......320.........330.........340.........350.........360.........370..
 
   342.......350.........360.........370 .........380.........390.
Predicted Secondary structure 




















.








Query SS confidence 




























.




















Query Sequence  LWNLRSLPTYRVGRAQYKCPVFDLITTPW. SVEQHVIGVTCGGELTLTGLA
Query Conservation 





 


 
 

     
  
     .   
        
        
Alig confidence 


....





















.




















Template Conservation 

 ....    
      
 
 
  

 




  

 

  
 
 
  
 
Template Sequence  VYN. . . . EKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLP
Template Known Secondary structure  ....TT
SS
BTTTS


Template Predicted Secondary structure  ....















Template SS confidence 


















































   373.. ....380.........390.........400.........410.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D