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Job Descriptionexo99____
Confidence96.90%DateMon Feb 25 17:28:45 GMT 2019
Rank322Aligned Residues206
% Identity14%Templatec5yjeA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:protein hira; PDBTitle: crystal structure of hira(644-1017)
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   224.....230.........240.........250.........260.........270.........280...
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Query Sequence  QEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLL
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Template Sequence  TSRILTAAGSC. . . DVVCVACEKRMLSVFSTCGRRLLSPILL. . . . . PSPISTLHC. . . T
Template Known Secondary structure  SS

S...STTTTTS

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   735....740..... ....750.........760.........770... ......780.. .
 
   284.....290.........300.........310 .........320.........330......
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Query Sequence  PFALATASSDGIISVFDCRYPSTAVRT. . . . . . . IPSLHGDIMSLKYLKLHSDIIATGGV
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Template Sequence  GSYVMALTAAATLSVWDVH. RQVVVVKEESLHSILAGSDMTVSQILLTQ. HGIPVMNLS.
Template Known Secondary structure  TTTTSTT.TTSTTS



T.TS
T.
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   784.....790.........800.. .......810.........820.........830. ........840
 
   337..340.........350.........360.........370.........380.........390......
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Query Sequence  DGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELTLTGLAQEAMA
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Template Sequence  DGKAYCFN. . . . . . . . . PSLSTWNLVSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS.........TTTT................................
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   841....... .850.........
 
   397..400.........410.........420.........430.. .......440.........450.....
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Query Sequence  TLAVPVTERLSKPSGRRQEDKTAANEATELMEREKY. GVGLLYSRRLREAYEVIVDCATK
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Template Sequence  . . . . . . . . . . . . . KQDSLAQCADFRCSGPLAIIQGRTSNSGRQAARLFSVPHVVQQETTL
Template Known Secondary structure  .............GGG

TTT





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   860.........870.........880.........890.........900......
 
   456...460.........470.........480.........490.........
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Query Sequence  RFARKEITMAMRLAGLLDVKMLPKFDYRAKVESFEAEEKCKREL
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Template Sequence  AYLENQVAAALTLQSSHEYRHW. LLVYARYLVNEGFEYR. LREI
Template Known Secondary structure  TT
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   917..920.........930........ .940.........950.... ....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Lawrence Kelley, Michael Sternberg 
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