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Job Descriptionexo99____
Confidence96.52%DateMon Feb 25 17:28:45 GMT 2019
Rank331Aligned Residues151
% Identity11%Templatec5jrlC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like PDBTitle: crystal structure of the sphingopyxin i lasso peptide isopeptidase2 spi-isop (native)
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.... .....250.........260.........270........
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Query Sequence  LLFAQWVPNSDSVVLTGS. . . . . . . . YSGSLVFTDIRTKEGSTSKLSLPARRGCMARCAD
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Template Sequence  VNEIALSDNGRLAIYAAEIADLDAGKPRSHIRIVDVETGRTKELL. . . . . . TVDTIKSLR
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SSSSTTTTTTT

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   45....50.........60.........70.........80......... 90........
 
   279280.........290.........300.........310...... ...
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Query Sequence  FNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHG. . . . . . . . . . . . . . . . . . . DIM
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Template Sequence  SVPGTQDWSALVDLGEGQQLYRIDTEGKLLPLIVNPNPVPVGKADMSFPLGIRPSHIGIL
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   99100.........110.........120.........130.........140.........150........
 
   320.........330.. .......340.........350.........360.........370.....
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Query Sequence  SLKYLKLHSDIIA. . . . TGGVDGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQH
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Template Sequence  DYDWSP. DGKWLWYSQLRAKSDGPRVRFDEEVTALLGRRRSTIDVEVDFFLRNPEGDTTR
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TTTTT

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   161..... ...170.........180.........190.........200.........210.........
 
   376...380....
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Query Sequence  VIGVTCGGE
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Template Conservation           
Template Sequence  IMARPSTDR
Template Known Secondary structure  TT
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   220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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