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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank116Aligned Residues279
% Identity12%Templatec5ov3B_
PDB info PDB header:structural proteinChain: B: PDB Molecule:retinoblastoma-binding protein 5; PDBTitle: structure of the rbbp5 beta-propeller domain
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.........80... ......90........ .100.........110.... .....120
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Query Sequence  GLNPLSTSGACVGLLTME. SAEAKLSGMSKMQWL. . NLPSTEPLSSVEWCEG. . SLLVGT
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Template Sequence  MALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSAS
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TTSSTTSTTTT

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   26...30.........40.........50.........60.........70.........80.....
 
   121........130.........140.........150.........160.........170...
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Query Sequence  SRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLV. . . . . . .
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Template Sequence  TDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVL
Template Known Secondary structure  TTSTTTT
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   86...90.........100.........110.........120.........130.........140.....
 
   174.....180.........190.........200.........210.........220.....
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Query Sequence  . . . . . . . . RCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQE
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Template Sequence  PVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFR. . . . . . VTTGTSNTT
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STT

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   146...150.........160.........170.........180.........190 .........
 
   226...230.........240.........250..... ....260.........270........
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Query Sequence  PLLFAQWVPNSDSVVLTGSYSGSLVFTDIR. . . . . . . TKEGSTSKLSLPARRGCMARCAD
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Template Sequence  AIKSIEFARKGS. CFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCC
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   200.........210. ........220.........230.........240.........250........
 
   279280.........290.........300.........310....... ..320.........330.......
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Query Sequence  FNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGD. IMSLKYLKLHSDIIATGGVD
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Template Sequence  FSGDGEYIVAGSARQHALYIWEKS. IGNLVKILHGTRGELLLDVAWHP. VRPIIASIS. S
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TTSSSSSSTT.TT
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   259260.........270.........280.. .......290.........300..... ....310.... .
 
   338.340.........350....
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Query Sequence  GSVVLWNLRSLPTYRVG
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Template Sequence  GVVSIWAQNQVENWSAF
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   316...320.........330..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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