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Job Descriptionexo99____
Confidence95.97%DateMon Feb 25 17:28:45 GMT 2019
Rank341Aligned Residues177
% Identity12%Templatec5v1dA_
PDB info PDB header:transferase/substrateChain: A: PDB Molecule:eif2ak3 protein; PDBTitle: complex structure of the bovine perk luminal domain and its substrate2 peptide
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.. .... ...140.........150.........160.........170.
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Query Sequence  LLVGTSRGRIVVADVSP. QTVE. . . DSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVST
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Template Sequence  VIISTLDGRIAALDPENHGKKQWDLDVGSGSLVSSMIIPSLDGDLFQETVPFTVESLL. .
Template Known Secondary structure  TTSTTTTS
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   107..110.........120.........130.........140.........150.........160....
 
   172.......180.........190.........200.........210.........220.........230.
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Query Sequence  LVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQ
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Template Sequence  . . . . . . . . . . . EDVVLVGGKSLTTYGLSAYSGKVRY. . . . . . . . . . . . . . . . . . . . . . . I
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   184.....190.........200........ .
 
   232.......240.........250.........260.........270.........280.........290.
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Query Sequence  WVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATAS
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Template Sequence  CSALGCRILLLQRTQKTVRAVGPRSGNEKWNF. . . . . . . . . SVGHFELRY. ITVIK. VSV
Template Known Secondary structure  SSS
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   217..220.........230.........240........ .250....... ..260.. ...
 
   292.......300.........310.........320.........330.. .......340..
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Query Sequence  SDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIA. . . . . . TGGVDGSVVL
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Template Sequence  ADWKVMAFNKK. GGHLEWEYQ. FSTPIASAWLVK. DGKVIPISLFDYLGMYRGQLYL
Template Known Secondary structure  TTT
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   316...320...... ...330..... ....340....... ..350.........360.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Lawrence Kelley, Michael Sternberg 
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