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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank133Aligned Residues250
% Identity16%Templatec6n31B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:ribosome biogenesis protein wdr12; PDBTitle: wd repeats of human wdr12
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150..
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Query Sequence  SKMQWLNLPSTEPLSSVEWCEGSLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSE
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Template Sequence  APQPEQCMFHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVK
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   91........100.........110.........120.........130.........140.........150
 
   153.. ....160.........170......... 180.........190..
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Query Sequence  EQT. . . PVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . . . . . AAVCSSSVVAVCD
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Template Sequence  KDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWD
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   151........160.........170.........180.........190.........200.........210
 
   193......200.........210.. .......220.........230......
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Query Sequence  SRAMVWDVKGATQPVHTWVP. SVDSSKNSPNEQEPLLFAQWVPNS. . . . . . . . . . . . . . .
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Template Sequence  KMLKIWSTVPTDEEDEMQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWD
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   211........220.........230.........240.........250.........260.........270
 
   237..240.........250.........260.........270..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . DSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGC
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Template Conservation                                                              
Template Sequence  VGSGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGW
Template Known Secondary structure  TTTT
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   285....290.........300.........310.........320.........330.........340....
 
   273......280.........290.........300.........310.........320.........330..
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Query Sequence  MARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIA
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Template Sequence  VTSVKWSPT. HEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTD. TG. LLL
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   345....350... ......360.........370.........380.........390...... .. .400.
 
   333......340.....
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Query Sequence  TGGVDGSVVLWNL
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Template Sequence  SGGADNKLYSYRY
Template Known Secondary structure  TTS
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   402.......410....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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