Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.92%DateMon Feb 25 17:28:45 GMT 2019
Rank150Aligned Residues248
% Identity15%Templatec3odtB_
PDB info PDB header:nuclear proteinChain: B: PDB Molecule:protein doa1; PDBTitle: crystal structure of wd40 beta propeller domain of doa1
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.... .....120.........130...... ...140.........
Predicted Secondary structure 











.









.








Query SS confidence 






















.





















.












Query Sequence  MSKMQWLNLPSTEPLSSVEWCEG. SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLV
Query Conservation 
 
 








 








. 




 










 

 . 
 
 
    


Alig confidence 






















.





















.












Template Conservation 
  
   
 

   
  
       
 
 
 
  
 


            
   
    
Template Sequence  GYQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVC
Template Known Secondary structure 




SS
TTTTSSSS
SS
Template Predicted Secondary structure 























Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   150.........160.........170. ........180.........190.....
Predicted Secondary structure 


















..............

















Query SS confidence 





















. . . . . . . . . . . . . .























Query Sequence  CSEEQTPVGDIVVPPSKHAVST. . . . . . . . . . . . . . LVRCVRSNAAVCSSSVVAVCDSRA
Query Conservation   
 

  
 


  

 
  

..............

 

  
   









 

Alig confidence 





















..............























Template Conservation                                                              
Template Sequence  YDSEKELLLFGGKDTXINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTA
Template Known Secondary structure  TTTTTTS
TT

TTS

S


SS
TTTTS
Template Predicted Secondary structure 











































Template SS confidence 



























































   62.......70.........80.........90.........100.........110.........120.
 
   196...200... ......210.........220......
Predicted Secondary structure 


.............................


















Query SS confidence 







. . . . . . . . . . . . . . . . . . . . . . . . . . . . .






















Query Sequence  MVWDVKGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . TQPVHTWVPSVDSSKNSPNEQEP
Query Conservation 







.............................
 

  
  
   
 

 


  
Alig confidence 







.............................






















Template Conservation                                                              
Template Sequence  KVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDV
Template Known Secondary structure  TT

SS
TTTTTTS
TT
SS
SS
Template Predicted Secondary structure 











































Template SS confidence 



























































   122.......130.........140.........150.........160.........170.........180.
 
   227..230.........240.........250.........260.........270.........280......
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  LLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFA
Query Conservation 
 















 












  



 

 

   
 





 

 
Alig confidence 









..




















....

















..


Template Conservation            ..                     ....                  ..   
Template Sequence  VRHLAVVDDG. . HFISCSNDGLIKLVDXHTGDV. . . . LRTYEGHESFVYCIKLLP. . NGD
Template Known Secondary structure  TT..TTSTTT

....

SS

T..TS
Template Predicted Secondary structure 



..











....














..
Template SS confidence 



























































   182.......190. ........200.........210.. .......220.........230 ...
 
   287..290.........300.........310.........320.........330.........340......
Predicted Secondary structure 


























Query SS confidence 



























































Query Sequence  LATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLR
Query Conservation 




 









 
 
 



 



 
 





 



















Alig confidence 















.





















.


.















Template Conservation      
 
  
 


  .       
  
   
  
    .
  .


 
 

 
 

   
Template Sequence  IVSCGEDRTVRIWSKE. NGSLKQVITLPAISIWSVDCXS. NGD. IIVGSSDNLVRIFSQE
Template Known Secondary structure  TTS
TT.T
S
SSS

T.TS
.TTS
S
Template Predicted Secondary structure 





.








.


.




Template SS confidence 



























































   234.....240......... 250.........260.........270. ... .....280.........290
 
   347..350
Predicted Secondary structure 



Query SS confidence 



Query Sequence  SLPT
Query Conservation 
 

Alig confidence 



Template Conservation    
 
Template Sequence  KSRW
Template Known Secondary structure  GGG
Template Predicted Secondary structure 



Template SS confidence 



   291...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D