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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank126Aligned Residues250
% Identity13%Templatec5nuvA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:autophagy-related protein 16-1; PDBTitle: structure of the wd40-domain of human atg16l1
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   92.......100.........110.... .....120.........130.... .....140......
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Query Sequence  MSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQT. . . VEDSDGELQRRT
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Template Sequence  PATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGAACEFKGSLSGSNAGIT
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   311........320.........330.........340.........350.........360.........370
 
   147..150.........160.........170......... 180.........190...
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Query Sequence  CLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAVCSSSVVAVCDS
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Template Sequence  SIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR
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   371........380.........390.........400.........410.........420.........430
 
   194..... 200.........210.........220......
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Query Sequence  RAMVWD. . . . . . . . . . . . . . . . . . . . . . . . . . . VKGATQPVHTWVPSVDSSKNSPNEQEP
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Template Sequence  TLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGK
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   431........440.........450.........460.........470.........480.........490
 
   227..230.........240.........250.........260.........270.........280......
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Query Sequence  LLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFA
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Template Sequence  ITALDLNPERT. ELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSP. DGSY
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   491........500. ........510.........520.........530.........540.... ....
 
   287..290.........300.........310. ........320.........330.........340.....
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Query Sequence  LATASSDGIISVFDCRYPSTAVRTI. PSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNL
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Template Sequence  VAAGSAEGSLYIWSVL. TGKVEKVLSKQHSSSINAVAWSP. SGSHVVSVDKGCKAVLWAQ
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   549550.........560.... .....570.........580....... ..590.........600......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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