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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank137Aligned Residues261
% Identity13%Templatec3vu4B_
PDB info PDB header:protein transportChain: B: PDB Molecule:kmhsv2; PDBTitle: crystal structure of kluyvelomyces marxianus hsv2
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110.... .....120
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Query Sequence  AIGLNPLSTSGACVGLLTMESAEAKLSGMSKMQWLNLPSTEPLSSVEWCEG. . . SLLVGT
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Template Sequence  SNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTG
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   14.....20.........30.........40.........50.........60.........70...
 
   121........130.........140.........150..... ....160.........170..
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Query Sequence  SRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQT. . . . . . . . PVGDIVVPPSKHAVSTL
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Template Sequence  VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR
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   74.....80.........90.........100.........110.........120.........130...
 
   173......180.........190.........200.........210.........220.........230..
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Query Sequence  VRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQW
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Template Sequence  FGGVCEFSNGLLVYSNEFNLGQIHITKLQKGV. . . . . . . . . . . . . . LIKAHTNPIKMVRL
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   134.....140.........150.........160..... ....170.........
 
   233......240.........250.........260.........270.........280.........290..
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Query Sequence  VPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASS
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Template Sequence  NRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR. . GLDRADVVDMKWST. DGSKLAVVSD
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   199200.........210.........220.........230. ........240..... ....250.....
 
   293......300.........310.........320.........330.........340......
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Query Sequence  DGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLR
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Template Sequence  KWTLHVFEIFNDQS. . . . EWSLCNFKLSVDKHV. RGCKIAWISESSLVVVWPHT
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   256...260......... 270.........280.... .....290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Lawrence Kelley, Michael Sternberg 
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