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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank111Aligned Residues262
% Identity8%Templatec3bwsA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:protein lp49; PDBTitle: crystal structure of the leptospiral antigen lp49
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80... ......90.........100 .........110....
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Query Sequence  LAIGLNPLSTSGACVGLLTME. SAEAKLSGMSKMQWLNL. . . . . . . PSTEPLSSVEWCEG
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Template Sequence  TGFQPKSVRFIDNTRLAIPLLEDEGXDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH
Template Known Secondary structure 
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SSSSBTTSSSTTT




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GGG
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   144.....150.........160.........170.........180.........190.........200...
 
   115....120.........130. ........140.........150....... ..160.........170
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Query Sequence  . . SLLVGTSRGRIVVADVS. PQTVEDSDGELQRRTCLVCSEEQTPV. GDIVVPPSKHAVS
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Template Sequence  NELWVSQXQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVID
Template Known Secondary structure  TGGGTTTT


SSSSTTTTTTTT
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   204.....210.........220.........230.........240.........250.........260...
 
   171........180.........190.. .......200.........210
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Query Sequence  TLVRCVRSNAAVCSSSVVAVCD. . . . . . . . . . . . . . . . . . . . SRAMVWDVKGATQPVHTW
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Template Sequence  RKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSXDKE. . . . . . .
Template Known Secondary structure  TTTT



S
TTSSS
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   264.....270.........280.........290.........300.........310......
 
   211........220.........230.........240.........250.........260.........270
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Query Sequence  VPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARR
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Template Sequence  . . . . KLIDTIGPPGNKRHIVSGNTENK. IYVSDXCCSKIEVYDLKEKK. . . . . VQKSIPV
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   317..320.........330......... 340.........350......... 360......
 
   271........280.........290 .........300.........310.....
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Query Sequence  GCMARCADFNTLLPFALATA. . . . . . . . . . . . . . . SSDGIISVFDCRYPSTAVRTIPSLH
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Template Sequence  FDKPNTIALSP. DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT. TDTVKEFWEAGN
Template Known Secondary structure  SSS
T.TSS




TTT
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TT.TT
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   367..370....... ..380.........390.........400.........410.. .......420....
 
   316...320.........330. ........340.....
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Query Sequence  GDIMSLKYLKLHSDII. ATGGVDGSVVLWNL
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Template Sequence  Q. PTGLDVSP. DNRYLVISDFLDHQIRVYRR
Template Known Secondary structure  S.
T.TS
TTTT
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   425 ....430... ......440.........450...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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