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Job Descriptionexo99____
Confidence98.18%DateMon Feb 25 17:28:45 GMT 2019
Rank298Aligned Residues158
% Identity10%Templatec3a9gA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pqq-dependent sugar dehydrogenase apo-form
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250.........260.........270.....
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Query Sequence  SSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMAR
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Template Sequence  KISEVASDLEVPWSIAPLGGGR. . YLVTERPGRLVLISP. SGKKLVASFDVANVGEAGLL
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S
S
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STT
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   37..40.........50........ .60.........70... ......80.........90...
 
   276...280... ......290.. .......300.........310.. ....
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Query Sequence  CADFNTLL. . . . PFALATASS. . . . . . . . DGIISVFDCRYPSTAVRTIP. . . . . . . SLHG
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Template Sequence  GLALHP. EFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH
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T.TTTTS

GGG

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   94..... 100.........110.........120.........130.........140.........150..
 
   317..320.........330.........340.........350.........360.........370......
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Query Sequence  DIMSLKYLKLHSDIIATGGVDGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHV
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Template Sequence  NGGRIRFGP. DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP. . . . . . .
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T.TS



TT
GGGGT
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   153......160. ........170.........180.........190.........200....
 
   377..380.........390
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Query Sequence  IGVTCGGELTLTGL
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Template Sequence  . . . . . NSPIWSYGH
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   205....210...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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