Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence98.05%DateMon Feb 25 17:28:45 GMT 2019
Rank302Aligned Residues245
% Identity14%Templatec4mh1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:sorbose dehydrogenase; PDBTitle: crystal structure and functional studies of quinoprotein l-sorbose2 dehydrogenase from ketogulonicigenium vulgare y25
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130...... ...140.........150.........160....
Predicted Secondary structure 











.......




















.
Query SS confidence 























. . . . . . .



























.
Query Sequence  EGSLLVGTSRGRIVVADVSPQTVE. . . . . . . DSDGELQRRTCLVCSEEQTPVGDIVVPP.
Query Conservation 

 




 










 

 ....... 
 
 
    


 
 

  
 


  
.
Alig confidence 























.......



























.
Template Conservation   
            
    

   
                          
        
Template Sequence  NGTIVAGSTGCFVSGHDSATGEELWRNYFIPRARWMTGAWGQITYDPVTNLVHYGSTAVG
Template Known Secondary structure  TT




TTT

SS






S

S

TTTT




Template Predicted Secondary structure 



































Template SS confidence 



























































   159160.........170.........180.........190.........200.........210........
 
   165....170.........180....
Predicted Secondary structure  ......



















..................................
Query SS confidence  . . . . . .



















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . SKHAVSTLVRCVRSNAAVCS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ......
 
  



 

  
   

..................................
Alig confidence  ......



















..................................
Template Conservation         
 


  

   
                                        
Template Sequence  TLYGTNTRFAVRPDTGEIVWRHQTLPRDNWDQECTFEMMVTNVDVQPSTEMEGLQSINPN
Template Known Secondary structure 

TTSS
TTT

S
SS
SS




S




TT
TT
TT
Template Predicted Secondary structure 



































Template SS confidence 



























































   251........260.........270.........280.........290.........300.........310
 
   185....190.........200.........210.........220........
Predicted Secondary structure  ........


























........
Query SS confidence  . . . . . . . .











































. . . . . . . .
Query Sequence  . . . . . . . . SSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLL. . . . . . . .
Query Conservation  ........







 










 

  
  
   
 

 


  
 ........
Alig confidence  ........











































........
Template Conservation     
            
 
   
   
   
                             
Template Sequence  AATGERRVLTGVPCKTGTMWQFDAETGEFLWARDTNYQNMIESIDENGIVTVNEDAIEYD
Template Known Secondary structure  S



STT

TTT


SS


S
TT


TTT



Template Predicted Secondary structure 



































Template SS confidence 



























































   311........320.........330.........340.........350.........360.........370
 
   229230.........240.. .......250......
Predicted Secondary structure  ............




....................






Query SS confidence  . . . . . . . . . . . .













. . . . . . . . . . . . . . . . . . . .













Query Sequence  . . . . . . . . . . . . FAQWVPNSDSVVLT. . . . . . . . . . . . . . . . . . . . GSYSGSLVFTDIRT
Query Conservation  ............













....................

 










Alig confidence  ............













....................













Template Conservation        
       
                                   
 
 
 
  
Template Sequence  VCPTFLGGRDWPSAALNPDSGIYFIPLNNVCYDMMNTSNVTKLPPGKDMIGRIDAIDIST
Template Known Secondary structure 

S
TT
SS
SS

TTTT

B







S
B

TT


STTT
Template Predicted Secondary structure 




























Template SS confidence 



























































   377..380.........390.........400.........410.........420.........430......
 
   257..260.........270.........280.........290.........300.........310.. ...
Predicted Secondary structure 































.


Query SS confidence 























































.


Query Sequence  KEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIP. SLH
Query Conservation 

  



 

 

   
 





 

 





 









 
 
 



 .


Alig confidence 

.....

















.



















.








.


Template Conservation 
 .....  
               . 
  
  
  

 
 


  .

  

       
Template Sequence  GR. . . . . TLWSVERAAANYSPVLST. GGGVLFNGGTDRYFRALSQE. TGETLWQTRLATV
Template Known Secondary structure 

.....SS




.TTS
BTTSTT.T


SS
Template Predicted Secondary structure 
.....








.







.






Template SS confidence 



























































   449450 .........460........ .470.........480........ .490.........500.
 
   316...320.........330 .........340.........350.........360.....
Predicted Secondary structure 







...






















Query SS confidence 














. . .


































Query Sequence  GDIMSLKYLKLHSDI. . . IATGGVDGSVVLWNLRSLPTYRVGRAQYKCPVFDL
Query Conservation 
 
 





 



...
















 


 
 

     
  
Alig confidence 









.



...


































Template Conservation    
 

    .

  

 
  
                      
       
Template Sequence  ASGQAISYEV. DGMQYVAIAGGGVSYGSGLNSALAGERVDSTAIGNAVYVFAL
Template Known Secondary structure  B
S

.TT
S

GGGGGGGG
SS






S


Template Predicted Secondary structure 


.


























Template SS confidence 




















































   502.......510. ........520.........530.........540.........550...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D