Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank110Aligned Residues251
% Identity14%Templatec4ui9R_
PDB info PDB header:cell cycleChain: R: PDB Molecule:fizzy-related protein homolog; PDBTitle: atomic structure of the human anaphase-promoting complex
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.... .....140.........150......
Predicted Secondary structure 















...















Query SS confidence 


































. . .





















Query Sequence  LPSTEPLSSVEWCEGSLLVGTSRGRIVVADVSPQT. . . VEDSDGELQRRTCLVCSEEQTP
Query Conservation 




 








 




 










 
...
  
 
 
    


 
 

  
Alig confidence 


































...





















Template Conservation              
    

      
 

   
     
  
  
   
 

  
 

  
Template Sequence  LQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGNL
Template Known Secondary structure 



TT
B

TTSTTTTT


SSSTT

TTSS
Template Predicted Secondary structure 


























Template SS confidence 



























































   184.....190.........200.........210.........220.........230.........240...
 
   157..160.........170.........180... ......190.........200.....
Predicted Secondary structure 

























...........










Query SS confidence 


























. . . . . . . . . . .





















Query Sequence  VGDIVVPPSKHAVSTLVRCVRSNAAVC. . . . . . . . . . . SSSVVAVCDSRAMVWDVKGATQ
Query Conservation 
 


  

 
  



 

  
   
...........








 










 
Alig confidence 


























...........





















Template Conservation 
 

  

 
 

                               
               
Template Sequence  VAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNAEQLSSGSRDRMILQRDIRTPPL
Template Known Secondary structure  TTS
TTTT


SS
TTTTSSSSSS
Template Predicted Secondary structure 

































Template SS confidence 



























































   244.....250.........260.........270.........280.........290.........300...
 
   206... 210.........220.........230
Predicted Secondary structure 



...................................












Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




















Query Sequence  PVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSVDSSKNSPNEQEPLLFA
Query Conservation 

  ...................................
  
   
 

 


  
 

Alig confidence 



...................................




















Template Conservation                                                              
Template Sequence  QSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAW
Template Known Secondary structure 
S

SS



TTSS
TTS
TT
SS
S


SS


Template Predicted Secondary structure 
















































Template SS confidence 



























































   304.....310.........320.........330.........340.........350.........360...
 
   231........240.........250.........260.........270.........280.........290
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  QWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATA
Query Conservation 













 












  



 

 

   
 





 

 




Alig confidence 



























.....

















.







Template Conservation                              .....                  .    
  
Template Sequence  SPHQHGLLASGGGTADRCIRFWNTLTGQ. . . . . PLQCIDTGSQVCNLAWSK. HANELVST
Template Known Secondary structure 
SSSTT

TTT
TTT

.....
SS

S.SSS
Template Predicted Secondary structure 




















.....






.


Template SS confidence 



























































   364.....370.........380.........390. ........400......... 410.......
 
   291 ........300.........310.........320.........330.........340........
Predicted Secondary structure  ..




























Query SS confidence 
. .
























































Query Sequence  S. . SDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRSL
Query Conservation 
.. 









 
 
 



 



 
 





 




















 
Alig confidence 
..










.





















.





















Template Conservation 

  
  
 


  .       
 

   
  
  

.

  
 
 
 
  
 



   
Template Sequence  HGYSQNQILVWKYP. SLTQVAKLTGHSYRVLYLAMSP. DGEAIVTGAGDETLRFWNVFSV
Template Known Secondary structure 
TTT

TT.T





B


SS



T.TSSTTT



Template Predicted Secondary structure 





.








.










Template SS confidence 



























































   418.420.........430. ........440.........450... ......460.........470.....
 
   349350........
Predicted Secondary structure 









Query SS confidence 









Query Sequence  PTYRVGRAQY
Query Conservation 


 
 

  
Alig confidence 









Template Conservation    
      
Template Sequence  SVLNLFTRIR
Template Known Secondary structure 
SS
TTTTT
Template Predicted Secondary structure 



Template SS confidence 









   484.....490...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D