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Job Descriptionexo99____
Confidence98.06%DateMon Feb 25 17:28:45 GMT 2019
Rank301Aligned Residues168
% Identity15%Templatec2j04C_
PDB info PDB header:transcriptionChain: C: PDB Molecule:hypothetical protein ypl007c; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210.........220.........230.........240.........250.........260...
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Query Sequence  TQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSK
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Template Sequence  ENKLDFELAQQNGLLNSQP. VCYPRVCKPSPIDD. WMAVLSNNGNVSVFKDNK. . MLTNL
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   66...70.........80.... .....90........ .100.........110...... ...120.
 
   264.....270.........280.........290.........300.... .....310 ...
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Query Sequence  LSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYP. . . . . STAVRT. . . . . IPS
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Template Sequence  DSKGNLSSRTYHCFEWNP. IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAG
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   122.......130......... 140.........150.........160.........170.........180
 
   314.....320.........330.........340...... ...350.........360.........
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Query Sequence  LHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLR. . . . SLPTYRVGRAQYKCPVFDLITTP
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Template Sequence  SKDWVTHIVWY. . . EDVLVAALSNNSVFSMTVSASSHQPVSRMIQNA. SRRKITDLKIVD
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   181........190. ........200.........210.........220.... .....230......
 
   370.........380.....
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Query Sequence  WSVEQHVIGVTCGGEL
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Template Sequence  YK. . . . . VVLTCPGYV
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   237. .240.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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