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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank4Aligned Residues328
% Identity16%Templatec4bzkA_
PDB info PDB header:protein transportChain: A: PDB Molecule:protein transport protein sec31; PDBTitle: the structure of the copii coat assembled on membranes
Resolution40.00 Å
Model Dimensions (Å)X:60.919 Y:66.891 Z:63.203

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.. .......60.........70.........80.........90...
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Query Sequence  AHSDILPPATTAKVFSTA. QLAAHHRENVLAIGLNPLSTSGACVGLLTMESAEAKLSGMS
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Template Sequence  ATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS. . . . . . . . . . . .
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B

B
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   11........20.........30.........40.........50........
 
   94.....100.........110.... .....120.........130. ........140......
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Query Sequence  KMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVS. . . . . PQTVEDSDGELQRRT
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Template Sequence  . . . . . . LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK
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SS

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   5960.........70.........80.........90.........100.........110..
 
   147..150.. .......160.........170.. .......180..
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Query Sequence  CLVCSE. EQTPVGDIVVPPSKHAVSTL. . . . . . . . . . . . . . . . . . . . . . . VRCVRSNAAV
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Template Sequence  TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL
Template Known Secondary structure 
SSSTTB
SSS
B
BTTTTSS
TTT


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   113......120.........130.........140.........150.........160.........170..
 
   183......190.........200.........210.........220.........230.........240..
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Query Sequence  CSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLT
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Template Sequence  AHVFASAGSSNFASIWDLKAKKEVIHLSYTSP. . . . . NSGIKQQLSVVEWHPKNSTRVAT
Template Known Secondary structure  TTSSSS
TTTT




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   173......180.........190.........200.... .....210.........220.......
 
   243..... .250.........260.........270.........280.........290.........
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Query Sequence  GSYSGS. . . LVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVF
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Template Sequence  ATGSDNDPSILIWDLRNANT. . PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW
Template Known Secondary structure 

SSS



TTSTTS..
SB


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   228.230.........240....... ..250.........260.........270.........280.....
 
   300.........310.........320.........330.........340.........350.........
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Query Sequence  DCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRSLPTYRVGRAQYK
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Template Sequence  NPE. SAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDESK. EK
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SS.S


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   286.. .290.........300.........310.........320.........330.........340. ..
 
   360.........370..... ....380.........
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Query Sequence  CPVFDLITTPWSVEQH. VIGVTCGGELTLTG
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Template Sequence  PSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT
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   366...370.........380.........390......
 
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