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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank8Aligned Residues335
% Identity12%Templatec5juyB_
PDB info PDB header:apoptosisChain: B: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: active human apoptosome with procaspase-9
Resolution4.10 Å
Model Dimensions (Å)X:75.368 Y:61.966 Z:46.916

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NESIIQVPLYVSTSAWRKEVQLRGLLRNHPSIIAHSDILPPATTAKVFSTAQLAAHHREN
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Template Sequence  GSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRT
Template Known Secondary structure  TTTTS
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   894.....900.........910.........920.........930.........940.........950...
 
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Query Sequence  VLAIG. . . . . LNPLSTSGACVGLLTMESAEAKL. . . SGMSKMQWLNLPSTEPLSSVEWCE
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Template Sequence  GQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTA
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   954.....960.........970.........980.........990.........1000.........1010...
 
   114 .....120.........130.........140.........150.........160.........170.
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Query Sequence  G. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVST
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Template Sequence  DEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDFRLLK. . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
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   1014.....1020.........1030.........1040.........1050....
 
   172.......180.........190.........200.........210.........220.........230.
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Query Sequence  LVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQ
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Template Sequence  . . . . . . . . . . . NSRLLSWSFDGTVKVWNIITGNK. . . . . . . . . . . EKDFVCHQGTVLSCD
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   1055....1060.........1070....... ..1080.........1090..
 
   232.......240.........250.........260.........270.........280.........290.
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Query Sequence  WVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATAS
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Template Sequence  ISHDAT. KFSSTSADKTAKIWSFDLLLP. . . . LHELRGHNGCVRCSAFSV. DSTLLATGD
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   1093..... .1100.........1110......... 1120.........1130....... ..1140......
 
   292.......300.........310.. .......320.........330.........340...
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Query Sequence  SDGIISVFDCRYPSTAVRTIP. . . . . . . . SLHGDIMSLKYLKLHSDIIATGGVDGSVVLW
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Template Sequence  DNGEIRIWNVS. NGELLHLCAPLSEEGAATHGGWVTDLCFSP. DGKMLISAG. . GYIKWW
Template Known Secondary structure  TT



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   1147..1150....... ..1160.........1170.........1180....... ..1190...... ...1200..
 
   344.....350.........360.........370.........380.........390
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Query Sequence  NLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELTLTGL
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Template Sequence  NVVTGESSQTFYT. NGTNLKKIHVSP. . DFKTYVTVDNLGILYILQT
Template Known Secondary structure  SSSS
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   1203......1210..... ....1220....... ..1230.........1240......
 
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