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Job Descriptionexo99____
Confidence98.71%DateMon Feb 25 17:28:45 GMT 2019
Rank281Aligned Residues233
% Identity14%Templatec2eepA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dipeptidyl aminopeptidase iv, putative; PDBTitle: prolyl tripeptidyl aminopeptidase complexed with an inhibitor
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140.........150.........160...
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Query Sequence  EPLSSVEWCEGSLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVP
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Template Sequence  EYVVGLQWMGDNYV. . FIEGDDLVFNKTTRFSAADLNALMPFPSFRTLDAGRGL. . . . . .
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SSTT
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   52.......60..... ....70.........80.........90.........100...
 
   164.....170.........180.........190.........200.........210.........220...
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Query Sequence  PSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . VVLFTQGGLVGFDMLARK. . . . . . . . . . . . VTYLFDT
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   121........130........ .140.....
 
   224.....230.........240.........250.........260.........270..
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Query Sequence  QEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGC. . . . . . . . . . .
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Template Sequence  NEETASLDFSPVGD. RVAYVR. NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ
Template Known Secondary structure  TT

TT

TTSS..TT
B
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S
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BTTSS

GG
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   146...150......... 160..... ....170.........180.........190.........200...
 
   273......280.........290.....
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Query Sequence  . . . . MARCADFNTLLPFALATASSDGI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  REFGIEKGTFWSP. KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT
Template Known Secondary structure  G
TT


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   204.....210...... ...220.........230.........240.........250.........260..
 
   296...300..... ....310.........320.........330.... .....340.........
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Query Sequence  ISVFDCRYPS. TAVRTIPSLHGDIMSLKYLKLHSDIIATG. . . . . GVDGSVVLWNLRSLP
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Template Sequence  VGIYHLATGKTVYLQTGEPKEKFLTNLSWSP. DENILYVAEVNRAQNECKVNAYDAETGR
Template Known Secondary structure  TTTT



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TT

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   263......270.........280.........290... ......300.........310.........320.
 
   350 .........360.........370.........380...
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Query Sequence  T. . . . YRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGG
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Template Sequence  FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG
Template Known Secondary structure 
SS




S


TT
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   322.......330.........340.........350.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Lawrence Kelley, Michael Sternberg 
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