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Job Descriptionexo99____
Confidence99.91%DateMon Feb 25 17:28:45 GMT 2019
Rank163Aligned Residues261
% Identity12%Templatec4fhlA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:nucleoporin nup37; PDBTitle: nucleoporin nup37 from schizosaccharomyces pombe
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.... .....120.........130.........140.........150...
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Query Sequence  LPSTEPLSSVEWCEG. . . . . . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEE
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Template Sequence  TLHLSFSSSCSYSENSPVYSLFLACVCQDNTVRLIITKNETIITQ. . . . . . . . . . . . . . .
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   70.........80.........90.........100.........110....
 
   154.....160.........170.........180.........190.........200.........210...
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Query Sequence  QTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPS
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Template Sequence  HVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE. . . . . . . . . .
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   125....130.........140.........150.........160.........170....
 
   214.....220.........230.........240.........250........ .260.......
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Query Sequence  VDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKE. . . . . . GSTSKLSLP
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Template Sequence  . GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLTELVKNPWLLTLNTL
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   175....180.........190.........200.........210.........220.........230...
 
   268.270.........280.........290.........300.........310.........320.......
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Query Sequence  ARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLH
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Template Sequence  PLVNSSLANVRWIGSDGSGILAMCKSGAWLRWNLFKNLLPNVQGISLFPSLLGACPHPRY
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   241........250.........260.........270.........280.........290.........300
 
   328.330. ........340.........350.........360.........370.........380......
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Query Sequence  SDII. ATGGVDGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELT
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Template Sequence  MDYFATAHSQHGLIQLINTYEKDSNSIPIQ. LGMPIVDFCWHQ. . . DGSHLAIATEGSVL
Template Known Secondary structure  TTTTTTSSS
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   326...330.........340.........350..... ....360....... ..370.........380.
 
   387..390
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Query Sequence  LTGL
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Template Sequence  LTRL
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   382...
 
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No model constructed - rank, confidence too low




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