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Job Descriptionexo99____
Confidence99.97%DateMon Feb 25 17:28:45 GMT 2019
Rank36Aligned Residues306
% Identity15%Templatec4o9dA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:rik1-associated factor 1; PDBTitle: structure of dos1 propeller
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80... ......90.........100
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Query Sequence  TAKVFSTAQLAAHHRENVLAIGLNPLSTSGACVGLLTME. SAEAKLSGMSKMQWLNL. . .
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Template Sequence  LMDGESVFFLKPWKHFNETSGDTVCVAYNPLCEKFALGSTAQGNLWIGDFHSETIQSLES
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   221........230.........240.........250.........260.........270.........280
 
   101........110.... .....120.........130.........140.........
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Query Sequence  . . . . . . . . . PSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLV
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Template Sequence  HYKLNQVGEKEYSTISDLCFSKGNLFLYTGAFDNAVKVWDMEGNLCGIFNAPTDYIHKLA
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TTS



TTSSTTS
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   288.290.........300.........310.........320.........330.........340.......
 
   150.........160.........170.........180.
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Query Sequence  CSEEQTPVGDIVVPPSKHAVSTLVRCVRSNAA. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LSDDDLLAVACKNGYGYLLSTDNSTGEILTSANLIYPEALEKGYSASLIEFSNFLGRSSD
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   348.350.........360.........370.........380.........390.........400.......
 
   182.......190.........200.........
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Query Sequence  . . . . VCSSSVVAVCDSRAMVWDVKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KVIIGYDSFHTSNNRGCLALFDASTASFVQKFNTADEAFTSLYMHPSQVGFVASSNTLSN
Template Known Secondary structure  GGGTTTTT
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   408.410.........420.........430.........440.........450.........460.......
 
   210.........220.........230.........240.........250........ .260..
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Query Sequence  . . . . . . WVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKE. GSTS
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Template Conservation                                    .                         
Template Sequence  GRVYYLDTRMYKVCLNFTTTQKDINHATISNSGI. LVTSSGTDNQTFVWDSRKPDKPLSL
Template Known Secondary structure  TTTTS
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   468.470.........480.........490.........500. ........510.........520......
 
   263......270.........280.........290.........300.........310.........320..
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Query Sequence  KLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLK
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Template Sequence  LKHGKTKMIAGINMAQWQP. KGNLFVTGGSDGIVKVWDLRLNNPFIQNFTEMNSAITYGG
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   527..530.........540..... ....550.........560.........570.........580.....
 
   323......330.........340..... ....350...
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Query Sequence  YLKLHSDIIATGGVDGSVVLWNL. RSLPTYRV
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Template Sequence  FSE. DASKLTVCCVGGDVNMYSLGNKFGEFRI
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T.TSSTTT


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B

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   597.. 600.........610.........620.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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