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Job Descriptionexo99____
Confidence99.90%DateMon Feb 25 17:28:45 GMT 2019
Rank175Aligned Residues291
% Identity17%Templatec1r5mA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:sir4-interacting protein sif2; PDBTitle: crystal structure of the c-terminal wd40 domain of sif2
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30. ........40.........50.........60.........70.........80..
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Query Sequence  GLLRNHP. . SIIAHSDILPPATTAKVFSTAQLAAHHRENVLAIGLNPLSTSGACVGLLTM
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Template Sequence  KILKEIVKLDNIVSSTWNP. . . . . . . . . LDESILAYGEKNSVARLARIVETYWKLTIIAE
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S

S
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TTTBT

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   149150.........160....... ..170.........180.........190.........
 
   83......90.........100.........110.... .....120.........130.........140
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Query Sequence  ESAEAKLSGMSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDG
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Template Sequence  LRHPF. . . . . . . . . . . . ALSTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNF
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B

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   206...210 .........220.........230.........240.........250...
 
   141........150.........160.........
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Query Sequence  ELQRRTCLVCSEEQTPVGDIVVPPSKHAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKGSLGVDVEWVDDDKFVI
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TTSSTT

TTTT





BS

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   260.........270.........280.........290.........300.........310.........
 
   170.........180.........190.........200.........210.......
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Query Sequence  . . . . . . . . . . . . STLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSS
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Template Sequence  PGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ
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GGG
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SS
TTTTTTS

SSSBS
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   335....340.........350.........360.........370.........380.........390....
 
   218.220.........230.........240.........250.........260.........270.......
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Query Sequence  KNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCA
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Template Sequence  NCFYGHSQSIVSASWVGDD. . KVISCSMDGSVRLWSLKQNTL. . . . LALSIVDGVPIFAG
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TTT..TTSTTTT....
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   395....400.........410... ......420.........430.... .....440........
 
   278.280.........290.........300.........310.... .....320.........
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Query Sequence  DFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSL. . . . . . . . HGDIMSLKYLKLHSD
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Template Sequence  RISQ. DGQKYAVAFMDGQVNVYDLK. KLNSPLPIPLYASYQSSQDNDYIFDLSWNC. AGN
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T.TSSTTS

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   449450.. .......460.........470.. .......480.........490.........500.. ...
 
   330.........340.....
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Query Sequence  IIATGGVDGSVVLWNL
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Template Sequence  KISVAYSLQEGSVVAI
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   520.........530.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Lawrence Kelley, Michael Sternberg 
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