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Job Descriptionexo99____
Confidence97.93%DateMon Feb 25 17:28:45 GMT 2019
Rank307Aligned Residues323
% Identity13%Templatec3q54A_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:outer membrane assembly lipoprotein yfgl; PDBTitle: crystal structure of escherichia coli bamb
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.... .....80.........90.....
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Query Sequence  ILPPATTAKVFSTAQLAAHHRENVLAIGLNPLSTSG. . . ACVGLLTMESAEAKLSGMSKM
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Template Sequence  VKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDG
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   30.........40.........50.........60.........70.........80.........
 
   96...100 .........110.........120.........130... ..
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Query Sequence  QWLNL. . . . . . . . . . . . PSTEPLSSVEWCEGSLLVGTSRGRIVVADVSPQ. . . . . . . . TV
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Template Sequence  KEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG
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   90.........100.........110.........120.........130.........140.........
 
   136...140.........150.........160.........170.........180.........190.....
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Query Sequence  EDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRA
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Template Sequence  EALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLRGESAPTTAFGAAVVGGDNGRV
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   150.........160.........170.........180.........190.........200.........
 
   196...200.........210.........220.........230.... .....240.........250...
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Query Sequence  MVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVP. . NSDSVVLTGSYSGSLVFTD
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Template Sequence  SAVLMEQG. . . . . . . . . . . QMIWQQRISQDRLSDVDTTPVVVNG. VVFALAYNGNLTALD
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   217..220.... .....230.........240......... 250.........260....
 
   254.....260.........270.........280.........290.........300.........310...
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Query Sequence  IRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPS
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Template Sequence  LRSGQIMWKR. . . . . . . . ELGSVNDFIV. DGNRIYLVDQNDRVMALTID. GGVTLWTQSD
Template Known Secondary structure  TTT

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   272.......280. ........290. ........300.........310. ........320.
 
   314.....320.........330.........340.........350.........360.........370...
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Query Sequence  LHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVE
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Template Sequence  LLHRLLTSPVLY. . NGNLVVGDSEGYLHWINVEDGRF. . . . VAQQKVDSSGFQTEPVAAD
Template Known Secondary structure  TTTS
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   322.......330... ......340.........350...... ...360.........370.....
 
   374.....380.........
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Query Sequence  QHVIGVTCGGELTLTG
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Template Sequence  GKLLIQAKDGTVYSIT
Template Known Secondary structure  TBTTS
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   376...380.........390.
 
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No model constructed - rank, confidence too low




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