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Job Descriptionexo99____
Confidence99.65%DateMon Feb 25 17:28:45 GMT 2019
Rank231Aligned Residues260
% Identity12%Templatec3g4hB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:regucalcin; PDBTitle: crystal structure of human senescence marker protein-30 (zinc bound)
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.... .....120.........130.........140........
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Query Sequence  MSKMQWLNLPSTEPLSSVEWCEG. . . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCL
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Template Sequence  SIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV. TMDAPVSSV
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SBTTTTTTTTTTT

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   3......10.........20.........30.........40.........50.. .......60.
 
   149150.........160.........170... ......180.........190.........200...
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Query Sequence  VCSEEQTPVGDIVVPPSKHAVSTLV. . . . . RCVRSNAAVCSSSVVAVCDSRAMVWDVKGA
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Template Sequence  ALRQSGGYVATIGTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEE
Template Known Secondary structure  BTTSSTT
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   62.......70.........80.........90.........100.........110.........120.
 
   204.....210......... 220.........230.........240.........250.....
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Query Sequence  TQPVHTWVPSVDSSKN. . . . . . . . SPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIR
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Template Sequence  TAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD
Template Known Secondary structure  STTS



S

TTS
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GGGT
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   122.......130.........140.........150.........160.........170.........180.
 
   256...260.. .......270.........280.........290.........300.........310..
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Query Sequence  TKEGSTS. . . KLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIP
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Template Sequence  LQTGQISNRRSVYKLEKEEQIPDGMCIDA. EGKLWVACYNGGRVIRLDPV. TGKRLQTVK
Template Known Secondary structure  TTT



GGG

T.TS
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   182.......190.........200.........210 .........220.........230 .........
 
   313......320... ......330. ........340.........350.....
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Query Sequence  SLHGDIMSLKY. LKLHSDII. . . . ATGGVDGSVVLWNLRSLPTYRVGR
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Template Sequence  LPVDKTTSCCFGGK. NYSEMYVTCARDGMDPEGLLRQPEAGGIFKITG
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SSSBSG.GG
B
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   240.........250... ......260.........270.........280......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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