Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.89%DateMon Feb 25 17:28:45 GMT 2019
Rank185Aligned Residues240
% Identity13%Templatec2zkqa_
PDB info PDB header:ribosomal protein/rnaChain: A: PDB Molecule:18s ribosomal rna; PDBTitle: structure of a mammalian ribosomal 40s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
Resolution8.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.... .....120.........130.... .....140....
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Query Sequence  KMQWLNLPSTEPLSSVEWCEG. . . SLLVGTSRGRIVVADVSPQT. . . . . . VEDSDGELQR
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Template Sequence  TLRGTLKGH. GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHF
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   6...10.... .....20.........30.........40.........50.........60....
 
   145....150.........160.........170......... 180.........190.
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Query Sequence  RTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAVCSSSVVAVC
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Template Sequence  VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR
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   66...70.........80.........90.........100.........110.........120.....
 
   192.......200......... 210........
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Query Sequence  DSRAMVWDVKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSVDSSK
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Template Sequence  DKTIKLWNTLGVCKYTVQDESSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT
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   126...130.........140.........150.........160.........170.........180.....
 
   219220.........230.........240.........250.........260.........270........
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Query Sequence  NSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCAD
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Template Sequence  NHIGHTGYLNTVTVSPDGS. LCASGGKDGQAMLWDLNEGKHLYTL. . . . . . DGGDIINAL
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   187..190.........200..... ....210.........220.........230 .........
 
   279280.........290.........300.. .......310.........320.........330
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Query Sequence  FNTLLPFALATASSDGIISVFDCR. . . . . . . . YPSTAVRTIPSLHGDIMSLKYLKLHSDI
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Template Sequence  CFS. PNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA. DGQT
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   240.. .......250.........260.........270.........280.........290... ....
 
   331........340...
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Query Sequence  IATGGVDGSVVLW
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Template Sequence  LFAGYTDNLVRVW
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   298.300.........310
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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