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Job Descriptionexo99____
Confidence88.11%DateMon Feb 25 17:28:45 GMT 2019
Rank368Aligned Residues171
% Identity8%Templatec3s94A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:low-density lipoprotein receptor-related protein 6; PDBTitle: crystal structure of lrp6-e1e2
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200.........210.........220.........230.
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Query Sequence  LVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQ
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Template Sequence  DAAAVDFVFSHGLIYWSDVSEEAIKRTEFVQN. . . . . . . . . . . . . . . VVVSGLLSPDGLA
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   52.......60.........70.........80... ......90......
 
   232.......240.........250.........260.........270.........280.........290.
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Query Sequence  WVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATAS
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Template Sequence  CDWLGEKLYWTDSETNRIEVSNLDGSLR. . . . KVLFWQELDQPRAIALDPSSGFMYWTDW
Template Known Secondary structure  TTTTTTTTTTS
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   102.......110.........120......... 130.........140.........150.......
 
   292.. .....300.........310..... ....320.........330.........340.........
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Query Sequence  SDG. IISVFDCRYPSTAVRTIPSLH. GDIMSLKYLKLHSDIIATGGVDGSVVLWNLRSLP
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Template Sequence  GEVPKIERAGM. . DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN
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   158.160........ .170.........180.........190.........200.........210.....
 
   350.........360...
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Query Sequence  TYRVGRAQYKCPVF
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Template Sequence  RQPFALTLFEDILY
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   216...220.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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