Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank106Aligned Residues247
% Identity14%Templatec2vduB_
PDB info PDB header:transferaseChain: B: PDB Molecule:trna (guanine-n(7)-)-methyltransferase- PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110..... ....120.........130.........140 .........150......
Predicted Secondary structure 



.













.......









Query SS confidence 










.
























. . . . . . .















Query Sequence  PLSSVEWCEGS. LLVGTSRGRIVVADVSPQTVEDSDG. . . . . . . ELQRRTCLVCSEEQTP
Query Conservation   








 .




 










 

  
 
....... 
    


 
 

  
Alig confidence 










.
























.......















Template Conservation           

  
       
                          
  
  
 
   
Template Sequence  PLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFPIYSYIRNLRLTSDESR
Template Known Secondary structure 



SSSSTTTTT








TTSS
Template Predicted Secondary structure 


























Template SS confidence 



























































   6...10.........20.........30.........40.........50.........60.....
 
   157..160.........170.........180.........190.........200.........210......
Predicted Secondary structure 














































Query SS confidence 



























































Query Sequence  VGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDS
Query Conservation 
 


  

 
  



 

  
   









 










 

  
  
   
Alig confidence 
............................





















.......

Template Conservation 
............................
     
  
 

         .......  
Template Sequence  L. . . . . . . . . . . . . . . . . . . . . . . . . . . . IACADSDKSLLVFDVDKTSKNV. . . . . . . LK
Template Known Secondary structure  ............................GGGT
SSSSS
.......
Template Predicted Secondary structure  ............................











.......
Template SS confidence 



























































   117 ..120.........130......... 140.
 
   217..220.........230.........240.........250.........260.........270......
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  SKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARC
Query Conservation 
 

 


  
 















 












  



 

 

   
 
Alig confidence 




















.





































Template Conservation            
  
  
 
  .        
                          
  
Template Sequence  LRKRFCFSKRPNAISIAEDDT. TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTD
Template Known Secondary structure 
SS

TTSS.TTSTTS


SS




S
SS
Template Predicted Secondary structure 











.


















Template SS confidence 



























































   142.......150.........160.. .......170.........180.........190.........200
 
   277..280.. .......290.........300.........310.........320.........330....
Predicted Secondary structure 


..






















Query SS confidence 





. .



















































Query Sequence  ADFNTL. . LPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATG
Query Conservation 




 ..

 





 









 
 
 



 



 
 





 







Alig confidence 





..










































..






Template Conservation 
             
   
  
 
 
                 
       ..   
 
 
Template Sequence  VHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGK. . DYLLLSA
Template Known Secondary structure 
TTS
TTS
S
TT




SS

S..TT
Template Predicted Secondary structure 





















..

Template SS confidence 



























































   201........210.........220.........230.........240.........250. .......
 
   335....340......... 350.........360.........370.........380
Predicted Secondary structure 









..............



















Query SS confidence 














. . . . . . . . . . . . . .






























Query Sequence  GVDGSVVLWNLRSLP. . . . . . . . . . . . . . TYRVGRAQYKCPVFDLITTPWSVEQHVIGVT
Query Conservation 












 
..............

 
 

     
  
        
      
Alig confidence 














..............
























.




Template Conservation    
  
  
       
                           
         .     
Template Sequence  GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAIIEFAVSKIIKSKNLPFV. AFFVE
Template Known Secondary structure  SSSTTT


GGG

TTSB

B



SSSS.T
Template Predicted Secondary structure 




























.
Template SS confidence 



























































   259260.........270.........280.........290.........300.........310.. .....
 
   381........390
Predicted Secondary structure 



Query SS confidence 









Query Sequence  CGGELTLTGL
Query Conservation    
       
Alig confidence 









Template Conservation            
Template Sequence  ATKCIIILEM
Template Known Secondary structure  T
S
Template Predicted Secondary structure 


Template SS confidence 









   328.330.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D