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Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank102Aligned Residues275
% Identity14%Templatec2ovqB_
PDB info PDB header:transcription/cell cycleChain: B: PDB Molecule:f-box/wd repeat protein 7; PDBTitle: structure of the skp1-fbw7-cyclinedegc complex
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80... ......90... ......100.........110.......
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Query Sequence  NVLAIGLNPLSTSGACVGLLTME. SAEAKLSGMS. . KMQWLNLPSTEPLSSVEWCEGSLL
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Template Sequence  KGHDDHVITC. LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIII
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STTS
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   2377..2380...... ...2390.........2400.........2410.........2420.........2430.....
 
   118.120.........130.........140.........150.......
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Query Sequence  VGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPV. . . . . . . . . . . . . . . . . . . .
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Template Sequence  SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLH
Template Known Secondary structure  TTS
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   2436...2440.........2450.........2460.........2470.........2480.........2490.....
 
   158.160.........170.........180.........190........
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Query Sequence  . . . . . . . . . . . . . . . . . . . GDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVW
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Template Sequence  VLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV
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GGGT


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   2496...2500.........2510.........2520.........2530.........2540.........2550.....
 
   199200.........210.........220.........230.........240.........250........
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Query Sequence  DVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKE
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Template Sequence  SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD. . . NILVSGNADSTVKIWDIKTGQ
Template Known Secondary structure  TTS
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   2556...2560.........2570.........2580.........2590. ........2600.........2610..
 
   259260.........270.........280.........290.........300.........310.. .
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Query Sequence  GSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIP. . . . . S
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Template Sequence  CLQT. LQGPNKHQSAVTCLQF. . . NKNFVITSSDDGTVKLWDLK. TGEFIRNLVTLESGG
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SSTTSTT.T


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   2613... ...2620.........2630.. .......2640.........2650.. .......2660.......
 
   314.....320.........330......... 340.....
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Query Sequence  LHGDIMSLKYLKLHSDIIATGGVDGS. . . . VVLWNL
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Template Sequence  SGGVVWRIRASN. TKLVCAVGSRNGTEETKLLVLDF
Template Known Secondary structure  GT

S.S
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   2668.2670......... 2680.........2690.........2700..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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