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Job Descriptionexo99____
Confidence99.05%DateMon Feb 25 17:28:45 GMT 2019
Rank273Aligned Residues128
% Identity11%Templatec3qqzA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:putative uncharacterized protein yjik; PDBTitle: crystal structure of the c-terminal domain of the yjik protein from2 escherichia coli cft073
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   216...220.........230.........240.........250.........260.........270.....
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Query Sequence  SSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMAR
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Template Sequence  DGKEIAGITNNISSLTWSAQSN. TLFSTINKPAAIVEXTTNGD. . . LIRTIPLDFVKDLE
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   86...90.........100....... ..110.........120....... ..130.........140.
 
   276...280.........290.........300.........310. ........320......
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Query Sequence  CADFNTLLPFALATASSDGIISVFDCRYPSTAVRTI. . . . . . . . . PSLHGDIMSLKYLKL
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Template Sequence  TIEYIG. DNQFVISDERDYAIYVISLT. PNSEVKILKKIKIPLQESPTNCGFEGLAYSR.
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S.TTTTTT
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   142..... ..150.........160....... ..170.........180.........190........
 
   327..330.........340.........350
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Query Sequence  HSDIIATGGVDGSVVLWNLRSLPT
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Template Sequence  QDHTFWFFKEKNPIEVYKVNGLLS
Template Known Secondary structure  TTTSSSSTT
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   199200.........210.........220..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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