|   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
S | V | V | A | V | C | D | S | R | A | M | V | W | D | V | K | G | A | T | Q | P | V | H | T | W | V | P | S | V | D | S | S | K | N | S | P | N | E | Q | E | P | L | L | F | A | Q | . |
. |
. |
. |
. |
. |
. |
. |
W | V | P | N | S | D |
Query Conservation |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|
|
|   |   |
|   |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|   |
Template Sequence |   |
Y | C | W | I | T | S | D | N | K | L | I | L | W | N | I | N | N | S | S | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | H | C | I | D | E | I | E | H | T | I | L | K | V | K | L | V | K | P | S | P | N | T | F | V | S | S | V | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | T | S | S |
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
| S |
|  |  |  |  |  |  |  |
|
|
| T | T | S | T | T | T | T | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
  |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
270 | . | . | . | . | . | . | . | |
. | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |  |  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | V | L | T | G | S | Y | S | G | S | L | V | F | T | D | I | R | T | K | E | G | S | T | S | K | L | S | L | P | A | R | . |
. |
. |
. |
. |
R | G | C | M | A | R | C | A | . |
D | F | N | T | L | L | P | F | A | L | A | T | A | S |
Query Conservation |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|   |
| . | . | . | . | . |
|   |   |   |
|   |
|
| . |
|
|
|
|   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
| . |
|
|   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   | . |   |
|
|
|
|   |   |
|   |
Template Sequence |   |
N | L | L | I | V | . |
A | T | L | F | D | I | Y | I | L | T | I | S | F | N | D | R | T | H | E | L | N | I | F | N | T | G | L | K | V | N | V | T | G | F | N | V | S | N | I | I | S | Y | E | R | . |
T | G | Q | I | F | F | T | G | A |
Template Known Secondary structure |   |
 |  |  |  |  | . |  |  | S | S |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
| T | T | T |
|  |  |  |  |  |  |  | T | T | . | T | T |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . |
  |
  |   |
292 | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | |
|
|
|
|
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
S | D | G | I | I | S | V | F | D | C | R | Y | P | S | T | A | V | R | T | I | P | S | L | H | G | D | I | M | S | L | K | Y | L | K | L | H | S | D | I | I | A | T | G | G | V | D | G | S | V | V | L | W | N | L | . |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   | . |   |   |   |
|
|
|
|   |
|   |
|
|
| . |   |
|   |
|   |   |   |
|   |
|   |
|
|   |
|
|   | . |
|
|   |
|
|
|
|
|
|   |   |   |   |
|   |
|
|   |
|   |   |   |
|   |   |
Template Sequence |   |
T | D | . |
G | V | N | V | W | E | L | Q | Y | N | K | I | C | . |
L | T | K | S | N | L | E | E | T | I | S | Q | L | E | V | D | Q | . |
S | R | G | V | L | H | T | L | S | T | K | S | I | V | R | S | Y | L | I | T | S | N | G | L | V |
Template Known Secondary structure |   |
T | S | . | T | T |
|
|  |  |  |
|
|
|
|
|  | . |  |  | S | S |
|
|
|
| S |  |  |  |  |  |  |  | T | . | T | T | T |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
278 | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | |
. | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
346 | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | |
|
. | . | . | . | . | . | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | S | L | P | T | Y | R | V | G | R | A | Q | Y | K | C | P | V | F | D | L | I | T | T | P | W | . |
. |
S | V | E | Q | H | V | I | G | V | T | C | G | G |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|
|
|   |
|
|   |   |   |
|
|   |   |
|   |
|
|
|
|
|   |   |
|
Template Sequence |   |
G | P | V | L | I | D | A | A | H | I | R | R | G | M | N | A | L | G | V | K | N | S | P | L | L | S | N | . |
R | A | F | K | I | A | K | I | V | S | I | S | M | C | E | N | N | D | L | F | L | A | V | I | T | T | T | G |
Template Known Secondary structure |   |
 |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
| G | G | G | S | T | . | T | T |
|
|  |  |  |  |  |  |
|
| T | T | T |
| S | S |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | |
. | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
  |