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Job Descriptionexo99____
Confidence99.96%DateMon Feb 25 17:28:45 GMT 2019
Rank57Aligned Residues242
% Identity16%Templated1sq9a_
SCOP info7-bladed beta-propeller WD40 repeat-like WD40-repeat
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130......... 140......
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Query Sequence  LNLPSTEPLSSVEWCEGSLLVGTSRGRIVVADVSPQTVEDSD. . . . . . . . . . . GELQRRT
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Template Sequence  AGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV
Template Known Secondary structure  SS
SSS

SSTTSSB

TT

GGGG

TT
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   11........20.........30.........40.........50.........60.........70
 
   147..150........ .160.........170.. .......
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Query Sequence  CLVCSEEQTPVG. . . DIVVPPSKHAVSTL. . . . . . . . . . . . . . . . . . . . . . . . VRCVRSN
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Template Conservation      
        
 
 
 
  
 

                                  
Template Sequence  LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG
Template Known Secondary structure  TTTTTS

TTT



S
TTGGGS
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   71........80.........90.........100.........110.........120.........130
 
   180.........190.........200.........
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Query Sequence  AAVCSSSVVAVCDSRAMVWDVKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ASNSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI
Template Known Secondary structure 



TTS
SSSSTTT





SSSS




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   131........140.........150.........160.........170.........180.........190
 
   210.........220.........230.........240........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . WVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGS
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Template Sequence  SERGLIATGFNNGTVQISELSTLRPLYNFESQHNNSNSIRSVKFSPQGS. LLAIAHDSNS
Template Known Secondary structure 
TTS
TTSTTTT








SSTT.TT
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   195....200.........210.........220.........230.........240... ......250...
 
   249250.... .....260.........270.........280.........290.........300....
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Query Sequence  LVFTDI. . . . RTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYP
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Template Sequence  FGCITLYETEFGERIGSLSVPGEFAHSSWVMSLSFND. SGETLCSAGWDGKLRFWDVK. T
Template Known Secondary structure  TTT


B


BSBSS

S.SSSTTSTT.T
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   257..260.........270.........280.........290... ......300.........310... .
 
   305....310...... ...320... ......330...
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Query Sequence  STAVRTIPSLHG. . . . . . . . . . . . . . . . . . . . . DIMSLKY. . . . . . . . . . LKLHSDIIAT
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Template Conservation 
    

  
   
                    
  
     
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Template Sequence  KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGAD. LNESLCC
Template Known Secondary structure  T

GGG
SSGGG


B
TTS
B
SS


TTTSBSTT
T.TS
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   323......330.........340.........350.........360.........370.... .....380.
 
   334.....340...
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Query Sequence  GGVDGSVVLW
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Template Conservation     
  

  
Template Sequence  VCLDRSIRWF
Template Known Secondary structure  TTT
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   382.......390.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Lawrence Kelley, Michael Sternberg 
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