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Job Descriptionexo99____
Confidence98.25%DateMon Feb 25 17:28:45 GMT 2019
Rank297Aligned Residues194
% Identity16%Templatec2hu7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acylamino-acid-releasing enzyme; PDBTitle: binding of inhibitors by acylaminoacyl peptidase
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   107..110..... ....120.........130.........140.........150.........160...
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Query Sequence  SSVEWCEGS. . . LLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVP
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Template Sequence  YSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVS
Template Known Secondary structure  TTTTTSSSS


SS

S

TTBS
S
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   25....30.........40.........50.........60.........70.........80....
 
   164.....170.........180.........190.........200.........210.........220...
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Query Sequence  PSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNE
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Template Sequence  K. . . . . . . . . . . . . . . . . . . . . . . . GAEQHALFKVNTSRPG. . . . . . . . . . . . EEQRLEA
Template Known Secondary structure  T........................TS

TTSTT............

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   85 ....90.........100. .......
 
   224.....230.........240.........250.........260.........270.........280...
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Query Sequence  QEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLL
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Template Sequence  VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG. . . . . LRELARLPGFGFVSDIRG. D
Template Known Secondary structure  S
SB
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   109110.........120.........130.........140... ......150.........160. .
 
   284.....290.........300.........310.........320.........330.........340...
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Query Sequence  PFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLW
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Template Sequence  LIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISP. GMKVTAGLETAREARLV
Template Known Secondary structure  TTTTT

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   163......170.........180.........190.........200.... .....210.........220.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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