Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.91%DateMon Feb 25 17:28:45 GMT 2019
Rank164Aligned Residues239
% Identity16%Templatec6g6nA_
PDB info PDB header:de novo proteinChain: A: PDB Molecule:tako8; PDBTitle: crystal structure of the computationally designed tako8 protein in c2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130. ........140.........150..
Predicted Secondary structure 














.















Query SS confidence 





































.




















Query Sequence  KMQWLNLPSTEPLSSVEWCEGSLLVGTSRGRIVVADVS. PQTVEDSDGELQRRTCLVCSE
Query Conservation 
 








 








 




 









.
 

  
 
 
    


 
 
Alig confidence 





































.




















Template Conservation    
  
 

   
  
  
   
 


 
  
 


            
   
  
    
Template Sequence  QSLRTLQGHQSAVTSLQFNDNIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFND
Template Known Secondary structure 




S

SSTTS
TTTT


SS

S
Template Predicted Secondary structure 
























Template SS confidence 



























































   2.......10.........20.........30.........40.........50.........60.
 
   153......160.........170.........180.........190.........200...
Predicted Secondary structure 





































.........
Query SS confidence 


















































. . . . . . . . .
Query Sequence  EQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGA. . . . . . . . .
Query Conservation 

  
 


  

 
  



 

  
   









 









.........
Alig confidence 


















































.........
Template Conservation                                                              
Template Sequence  NIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFNDNIVVSGSDDSTVKVWDIKTG
Template Known Secondary structure  STTSTTT



SS

SSTTS
TTT
Template Predicted Secondary structure 






















































Template SS confidence 



























































   62.......70.........80.........90.........100.........110.........120.
 
  
Predicted Secondary structure  ............................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  QSLRTLQGHQSAVTSLQFNDNIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFND
Template Known Secondary structure 



SS

SSTTS
TTT




SS

S
Template Predicted Secondary structure 



























































Template SS confidence 



























































   122.......130.........140.........150.........160.........170.........180.
 
   204.....210.........220.........230.........240.........250....
Predicted Secondary structure  .........




























Query SS confidence  . . . . . . . . .


















































Query Sequence  . . . . . . . . . TQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDI
Query Conservation  .........
 

  
  
   
 

 


  
 















 








Alig confidence  .........
































...














Template Conservation                                            ...               
Template Sequence  NIVVSGSDDSTVKVWDIKTGQSLRTLQGHQSAVTSLQFNDNI. . . VVSGSDDSTVKVWDI
Template Known Secondary structure  STTSTTTT

SS

SS...TTST
Template Predicted Secondary structure 





































...














Template SS confidence 



























































   182.......190.........200.........210.........220... ......230........
 
   255....260.........270.........280.........290.........300.........310....
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  RTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSL
Query Conservation 



  



 

 

   
 





 

 





 









 
 
 



 

Alig confidence 








......











.



















.










Template Conservation           ......            .    
 


 

 
 


  .       
  
Template Sequence  KTGQSLRTL. . . . . . QGHQSAVTSLQF. NDNIVVSGSDDSTVKVWDIK. TGQSLRTLQGH
Template Known Secondary structure  TT

......

SS
.
SSTTS
TT.TT


Template Predicted Secondary structure 








......







.







.




Template SS confidence 



























































   239240....... ..250......... 260.........270......... 280.........290
 
   315....320.........330.........340......
Predicted Secondary structure 















Query SS confidence 































Query Sequence  HGDIMSLKYLKLHSDIIATGGVDGSVVLWNLR
Query Conservation 

 
 





 



















Alig confidence 










.
..
















Template Conservation     
  
  
 . .. 
 
 
 

 
 

 
 
Template Sequence  QSAVTSLQFND. N. . IVVSGSDDSTVKVWDIK
Template Known Secondary structure  SS

S.S..TTS
S
Template Predicted Secondary structure 




.
..




Template SS confidence 































   291........300. . .......310.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D