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Job Descriptionexo99____
Confidence95.16%DateMon Feb 25 17:28:45 GMT 2019
Rank351Aligned Residues167
% Identity15%Templated1k3ia3
SCOP info7-bladed beta-propeller Galactose oxidase, central domain Galactose oxidase, central domain
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240....... ..250.........260......
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Query Sequence  KNSPNEQEPLLFAQWVPNSDSVVLTGSYSG. . . . . . . . . . . SLVFTDIRTKEGSTSKLSL
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Template Sequence  PTIDLPIVPAAAAIEPTSGR. VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV. . SDRTV
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STTTT.


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   163......170.........180.. .......190.........200.........210.... .....
 
   267..270.........280.........290. ........300.........310.........320.....
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Query Sequence  PARRGCMARCADFNTLLPFALATAS. SDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLK
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Template Sequence  TVTKHDMFPGISMDG. NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS
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T.TS

SSSTT
GGGT



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   220.........230.... .....240.........250.........260.........270........
 
   326...330....... ..340.........350.........360.........370...... ..
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Query Sequence  LHSDIIATGGVD. . . . . . GSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHV. IG
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Template Sequence  . DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLF
Template Known Secondary structure  .TS





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TTTTTTS
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TTGGGTTT
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   280.........290.........300.........310.........320.........330........
 
   379380.........
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Query Sequence  VTCGGELTLTG
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Template Sequence  GWKKGSVFQAG
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   339340.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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