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Job Descriptionexo99____
Confidence99.90%DateMon Feb 25 17:28:45 GMT 2019
Rank173Aligned Residues252
% Identity9%Templatec4yvdA_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:pleiotropic regulator 1; PDBTitle: crytsal structure of human pleiotropic regulator 1 (prl1)
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   8990.........100.........110.... .....120.........130...... ...140.....
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Query Sequence  LSGMSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRR
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Template Sequence  WHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTV
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   190.........200.........210.........220.........230.........240.........
 
   146...150.........160.........170.... .....180.........190.........200...
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Query Sequence  TCLVCSEEQTPVGDIVVPPSKHAVSTLVR. . CVRSNAAVCSSSVVAVCDSRAMVWDVKGA
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Template Sequence  RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRD
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   250.........260.........270.........280.........290.........300.........
 
   204.....210.........220.........230.........240.........250.........260...
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Query Sequence  TQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSK
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Template Sequence  STARIWDVRTKASVHTLSGHTNAVATVRCQAAEP. QIITGSHDTTIRLWDLVAGKTRVTL
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   310.........320.........330.........340... ......350.........360........
 
   264.. ...270.........280.......
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Query Sequence  LSL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PARRGCMARCADFNTLLPFAL
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Template Sequence  TNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVN. SDGVL
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   369370.........380.........390.........400.........410.........420.. .....
 
   288.290.........300.........310.........320.........330.........340.....
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Query Sequence  ATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNL
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Template Sequence  VSGADNGTMHLWDWR. TGYNFQRVHAESG. IFACAFDQ. SESRLLTAEADKTIKVYRE
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   428.430.........440.. .......450..... ....460... ......470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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