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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank113Aligned Residues254
% Identity13%Templatec1vyhT_
PDB info PDB header:hydrolaseChain: T: PDB Molecule:platelet-activating factor acetylhydrolase ib PDBTitle: paf-ah holoenzyme: lis1/alfa2
Resolution3.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.... .....120.........130. ........140...
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Query Sequence  AKLSGMSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVS. PQTVEDSDGELQ
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Template Sequence  KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD
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   92.......100.........110.........120.........130.........140.........150.
 
   144.....150.........160.........170.... .....180.........190.........200.
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Query Sequence  RRTCLVCSEEQTPVGDIVVPPSKHAVSTLVR. . CVRSNAAVCSSSVVAVCDSRAMVWDVK
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Template Sequence  SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS
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   152.......160.........170.........180.........190.........200.........210.
 
   202.......210.........220.........230.........240.........250.........260.
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Query Sequence  GATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGST
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Template Sequence  RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT. LIASCSNDQTVRVWVVATKECKA
Template Known Secondary structure  TTTTTT



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   212.......220.........230.........240....... ..250.........260.........270
 
   262.... ...270
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Query Sequence  SKLSL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PARR
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Template Conservation                                                              
Template Sequence  ELREHRHVVECISWAPESSYSSISEATGSEGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH
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SS
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GGGGGGG

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   271........280.........290.........300.........310.........320.........330
 
   271........280.........290.........300.........310.........320.........330
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Query Sequence  GCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDI
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Template Sequence  DNWVRGVLFHS. GGKFILSCADDKTLRVWDYK. NKRCMKTLNAHEHFVTSLDFHK. TAPY
Template Known Secondary structure  SS





S.SSS
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   338.340........ .350.........360........ .370.........380.........390 ....
 
   331........340....
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Query Sequence  IATGGVDGSVVLWN
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Template Sequence  VVTGSVDQTVKVWE
Template Known Secondary structure  TTT
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   395....400........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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