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Job Descriptionexo99____
Confidence99.90%DateMon Feb 25 17:28:45 GMT 2019
Rank176Aligned Residues244
% Identity17%Templatec6em5p_
PDB info PDB header:ribosomeChain: P: PDB Molecule:60s ribosomal protein l17-a; PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
Resolution4.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.... .....120.........130.........140.........150
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Query Sequence  SKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVC
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Template Sequence  PSYLNSF. SNEDWVSSLDVGDGSKHIISGSYDGIVRTWDLSGNVQKQYSGHSGPIRAVKY
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   94.....100 .........110.........120.........130.........140.........150..
 
   151........160.........170......... 180.........190........
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Query Sequence  SEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . AAVCSSSVVAVCDSRAMVW
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Template Sequence  ISNTRLVSAGNDRTLRLWKTKNDGKTLAILEGHKAPVVSIDVSDNSRILSASYDNSIGFW
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   153......160.........170.........180.........190.........200.........210..
 
   199200.........210.........220.........230.........240.........250........
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Query Sequence  DVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKE
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Template Sequence  STIYKEMTV. . . VRRRAPLSLLESHTAPVEQVIFDSTDNTVGYSVSQDHTIKTWDLVTAR
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   235....240... ......250.........260.........270.........280.........290.
 
   259260...... ...270.........280....
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Query Sequence  GSTSKLSL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PARRGCMARCADFNTLLP
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Template Sequence  CIDTRTTSYSLLSIAQLSTLNLLACGSSARHITLHDPRTQQQLIGHKNFVSSLDTCPENE
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   322.......330.........340.........350.........360.........370.........380.
 
   285....290.........300.........310. ........320.........330.........
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Query Sequence  FALATASSDGIISVFDCRYPSTAVRTI. . . . . PSLHGDIMSLKYLKLHSDIIATGGVDGS
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Template Sequence  YILCSGSHDGTVKVWDVR. STSPMYTITREDKSGVNDKVFAVKWAE. KVG. IISAGQDKK
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   389390.........400...... ...410.........420.........430... ... ...440.....
 
   340...
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Query Sequence  VVLW
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Template Sequence  IQIN
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   449450..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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