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Job Descriptionexo99____
Confidence97.46%DateMon Feb 25 17:28:45 GMT 2019
Rank317Aligned Residues204
% Identity10%Templatec6gc1A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:nhl repeat-containing protein 2; PDBTitle: crystal structure of trx-like and nhl repeat containing domains of2 human nhlrc2
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150.........160......
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Query Sequence  SSVEWCEGSLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSK
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Template Sequence  WDVVFGDILWIAMAGTHQIWALLLDSGKLPKKNELTKGTCLRFAGSGNEENRNNAYPHKA
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TTTT
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   339340.........350.........360.........370.........380.........390........
 
   167..170.........180.........190.........200.........210.........220......
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Query Sequence  HAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEP
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Template Sequence  GFAQPSGLSLASEDPWSCLFVADSESSTVRTVSLKDGAVKHLVGGERDPMNLFAFGDVDG
Template Known Secondary structure 
BS

STTT
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B
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   408.410.........420.........430.........440.........450.........460.......
 
   227..230.........240.........250.........260.........270.
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Query Sequence  . . . . . . . . . LLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRG. . . . . .
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Template Sequence  VGINAKLQHPLGVTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAGTGDTNNVTSSSFT
Template Known Secondary structure  GGG
B
SS

TTTTTTTTTTTT

S

S

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   468.470.........480.........490.........500.........510.........520.......
 
   272.......280.........290.........300.........310..
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Query Sequence  . . . . CMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIP
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Template Sequence  ESTFNEPGGLCIGENGELLYVADTNNHQIKVMDL. . ETKMVSVLP
Template Known Secondary structure  T


SS


SSSSGGGTT..TTT

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   528.530.........540.........550.........560. ........570
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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