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Job Descriptionexo99____
Confidence99.08%DateMon Feb 25 17:28:45 GMT 2019
Rank269Aligned Residues225
% Identity10%Templatec3no2A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein of unknown function (baccac_01654) from2 bacteroides caccae at 1.35 a resolution
Resolution1.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112... ....120.........130...... ...140.........150.........160........
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Query Sequence  CEGS. LLVGTSRGRIVVADVSPQTVE. . DSDGELQRRTCLVCSEEQTPVGDIVVPPSKHA
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Template Sequence  SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKXIT
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   21........30.........40.........50.........60.........70.........80
 
   169170.. .......180.........190.........200.........210.......
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Query Sequence  VSTL. . . . . . . . . . . VRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSS
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Template Sequence  RDGRELWNIAAPAGCEXQTARILPDGNALVAWCGHPSTILEVNXKGEVLSKTEFETG. . .
Template Known Secondary structure  TTS


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   81........90.........100.........110.........120.........130.......
 
   218.220.........230.........240.........250.........260.........270.......
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Query Sequence  KNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCA
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Template Sequence  . . IERPHAQFRQINKNKKGN. YLVPLFATSEVREIAPNGQLLNSVK. . . . . . LSGTPFSS
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   138.140.........150..... ....160.........170.........180 ........
 
   278.280.........290.........300.........310....... ..320.........330.
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Query Sequence  DFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGD. . . . . . IMSLKYLKLHSDII
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Template Sequence  AFLD. NGDCLVACGDAHCFVQLNLE. SNRIVRRVNANDIEGVQLFFVAQLFPLQ. NGGLY
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   189190.. .......200.........210.. .......220.........230.........240 .....
 
   332.. .....340.........350..
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Query Sequence  ATG. . . . . . . . . . . . . . . . . . . GVDGSVVLWNLRSLPTYR
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Template Sequence  ICNWQGHDREAGKGKHPQLVEIDSEGKV. VWQLNDKVKFG
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   246...250.........260.........270... ......280....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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