Phyre Home Retrieve Phyre Job Id
Emailmfield@mac.com
Descriptionexo99____
DateMon Feb 25 17:28:45 GMT 2019
Unique Job ID5c0c9d7c991b8ec9
SequenceMNESIIQVPL ... Download FASTA
Job Typeintensive
Job Expiry

Final Model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:95.794 Y:102.770 Z:118.025
Confidence Summary
1 







































































































































































































 200
201 







































































































































































































 400
401 







































































































































































































 600
601 







































































































































































































 800
801 












































































































Confidence Key
High(9)                    Low (0)
 
63% of residues modelled at >90% confidence (Details)
Publication-ready images
Hi-Res image(black background)
Hi-Res image(white background)
JSmol Viewer
Interactive 3D view in JSmol


Sequence analysis 

Download FASTA version

Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c5a1vK_



100.0 14
PDB header:transport protein
Chain: K: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat linkage i
2c3dm0A_



100.0 16
PDB header:sugar binding protein,signaling protein
Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with rack1;
PDBTitle: maltose binding protein fusion with rack1 from a. thaliana
3c4yczA_



100.0 13
PDB header:structural protein
Chain: A: PDB Molecule:fusion protein of sec13 and nup145c;
PDBTitle: y-complex hub (nup85-nup120-nup145c-sec13 complex) from m. thermophila2 (a.k.a. t. heterothallica)
4c4bzkA_



100.0 16
PDB header:protein transport
Chain: A: PDB Molecule:protein transport protein sec31;
PDBTitle: the structure of the copii coat assembled on membranes
5c2j04B_



100.0 18
PDB header:transcription
Chain: B: PDB Molecule:ydr362cp;
PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic
6c3jroA_



100.0 11
PDB header:transport protein, structural protein
Chain: A: PDB Molecule:fusion protein of protein transport protein sec13 and
PDBTitle: nup84-nup145c-sec13 edge element of the npc lattice
7c2ymuA_



100.0 19
PDB header:unknown function
Chain: A: PDB Molecule:wd-40 repeat protein;
PDBTitle: structure of a highly repetitive propeller structure
8c5juyB_



100.0 12
PDB header:apoptosis
Chain: B: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: active human apoptosome with procaspase-9
9c6em5m_



100.0 13
PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l14-a;
PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
10c5cvoD_



100.0 14
PDB header:hydrolase/protein binding
Chain: D: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48:usp46~ubiquitin ternary complex
11c5wbiA_



100.0 16
PDB header:protein binding
Chain: A: PDB Molecule:regulatory-associated protein of tor 1;
PDBTitle: crystal structure of the arabidopsis thaliana raptor
12c5tzsT_



100.0 14
PDB header:translation
Chain: T: PDB Molecule:utp21;
PDBTitle: architecture of the yeast small subunit processome
13c4wjsA_



100.0 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:rsa4;
PDBTitle: crystal structure of rsa4 from chaetomium thermophilum
14c5cvoA_



100.0 13
PDB header:hydrolase/protein binding
Chain: A: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48:usp46~ubiquitin ternary complex
15c5dfzB_



100.0 15
PDB header:transferase
Chain: B: PDB Molecule:serine/threonine-protein kinase vps15;
PDBTitle: structure of vps34 complex ii from s. cerevisiae.
16c5nzvC_



100.0 18
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit beta';
PDBTitle: the structure of the copi coat linkage iv
17c5i2tA_



100.0 17
PDB header:biosynthetic protein
Chain: A: PDB Molecule:periodic tryptophan protein 2;
PDBTitle: domain characterization of the wd protein pwp2 and their relevance in2 ribosome biogenesis
18c3j65q_



100.0 13
PDB header:ribosome
Chain: Q: PDB Molecule:60s ribosomal protein l18;
PDBTitle: arx1 pre-60s particle. this entry contains the r-proteins and2 biogenesis factors.
19c5n1aB_



100.0 8
PDB header:translation
Chain: B: PDB Molecule:utp4;
PDBTitle: crystal structure of utp4 from chaetomium thermophilum
20c5a1vL_



100.0 18
PDB header:transport protein
Chain: L: PDB Molecule:coatomer subunit beta;
PDBTitle: the structure of the copi coat linkage i
21c4wjuB_



not modelled 100.0 17
PDB header:biosynthetic protein
Chain: B: PDB Molecule:ribosome assembly protein 4;
PDBTitle: crystal structure of rsa4 from saccharomyces cerevisiae
22c5cvlA_



not modelled 100.0 12
PDB header:protein binding
Chain: A: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: wdr48 (uaf-1), residues 2-580
23c3iytG_



not modelled 100.0 17
PDB header:apoptosis
Chain: G: PDB Molecule:apoptotic protease-activating factor 1;
PDBTitle: structure of an apoptosome-procaspase-9 card complex
24c1pi6A_



not modelled 100.0 19
PDB header:protein binding
Chain: A: PDB Molecule:actin interacting protein 1;
PDBTitle: yeast actin interacting protein 1 (aip1), orthorhombic crystal form
25c5a1uC_



not modelled 100.0 11
PDB header:transport protein
Chain: C: PDB Molecule:coatomer subunit alpha;
PDBTitle: the structure of the copi coat triad
26c5n4aA_



not modelled 100.0 15
PDB header:transport protein
Chain: A: PDB Molecule:intraflagellar transport protein 80;
PDBTitle: crystal structure of chlamydomonas ift80
27c5k1bB_



not modelled 100.0 14
PDB header:protein binding/hydrolase
Chain: B: PDB Molecule:wd repeat-containing protein 48;
PDBTitle: crystal structure of the uaf1/usp12 complex in f222 space group
28c3mkqA_



not modelled 100.0 14
PDB header:transport protein
Chain: A: PDB Molecule:coatomer beta'-subunit;
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
29c1nr0A_



not modelled 100.0 19
PDB header:structural protein
Chain: A: PDB Molecule:actin interacting protein 1;
PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1).
30c5thaA_



not modelled 100.0 17
PDB header:rna binding protein
Chain: A: PDB Molecule:gem-associated protein 5;
PDBTitle: gemin5 wd40 repeats in complex with a guanosyl moiety
31c6cb1s_



not modelled 100.0 15
PDB header:ribosome
Chain: S: PDB Molecule:60s ribosomal protein l20-a;
PDBTitle: yeast nucleolar pre-60s ribosomal subunit (state 3)
32c4nsxA_



not modelled 100.0 17
PDB header:protein binding
Chain: A: PDB Molecule:u3 small nucleolar rna-associated protein 21;
PDBTitle: crystal structure of the utp21 tandem wd domain
33c6chgD_



not modelled 100.0 11
PDB header:transferase
Chain: D: PDB Molecule:klla0a08800p;
PDBTitle: crystal structure of the yeast compass catalytic module
34c4xfvA_



not modelled 100.0 12
PDB header:translation
Chain: A: PDB Molecule:elongator complex protein 2;
PDBTitle: crystal structure of elp2
35c4e54B_



not modelled 100.0 13
PDB header:dna binding protein/dna
Chain: B: PDB Molecule:dna damage-binding protein 2;
PDBTitle: damaged dna induced uv-damaged dna-binding protein (uv-ddb)2 dimerization and its roles in chromatinized dna repair
36c4o9dA_



not modelled 100.0 15
PDB header:gene regulation
Chain: A: PDB Molecule:rik1-associated factor 1;
PDBTitle: structure of dos1 propeller
37c5a5uB_



100.0 10
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: structure of mammalian eif3 in the context of the 43s preinitiation2 complex
38c2oajA_



not modelled 100.0 18
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:protein sni1;
PDBTitle: crystal structure of sro7 from s. cerevisiae
39c6mzcG_



not modelled 100.0 17
PDB header:transcription
Chain: G: PDB Molecule:transcription initiation factor tfiid subunit 5;
PDBTitle: human tfiid bc core
40c2aq5A_



not modelled 100.0 15
PDB header:structural protein
Chain: A: PDB Molecule:coronin-1a;
PDBTitle: crystal structure of murine coronin-1
41c2w18A_



not modelled 100.0 9
PDB header:nuclear protein
Chain: A: PDB Molecule:partner and localizer of brca2;
PDBTitle: crystal structure of the c-terminal wd40 domain of human2 palb2
42c3wj9A_



not modelled 100.0 13
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 2a;
PDBTitle: crystal structure of the eukaryotic initiation factor
43c6f3tD_



not modelled 100.0 16
PDB header:transcription
Chain: D: PDB Molecule:transcription initiation factor tfiid subunit 5;
PDBTitle: crystal structure of the human taf5-taf6-taf9 complex
44c5o9zF_



not modelled 100.0 17
PDB header:splicing
Chain: F: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp4;
PDBTitle: cryo-em structure of a pre-catalytic human spliceosome primed for2 activation (b complex)
45c5mzhB_



not modelled 100.0 16
PDB header:motor protein
Chain: B: PDB Molecule:dynein assembly factor with wdr repeat domains 1;
PDBTitle: crystal structure of oda16 from chlamydomonas reinhardtii
46c5ch2A_



not modelled 100.0 11
PDB header:transferase
Chain: A: PDB Molecule:putative polycomb protein eed;
PDBTitle: crystal structure of an active polycomb repressive complex 2 in the2 basal state
47c3jcmB_



not modelled 100.0 15
PDB header:transcription
Chain: B: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp4;
PDBTitle: cryo-em structure of the spliceosomal u4/u6.u5 tri-snrnp
48c4j0xA_



not modelled 100.0 13
PDB header:rna binding protein
Chain: A: PDB Molecule:ribosomal rna-processing protein 9;
PDBTitle: structure of rrp9
49c4ozuA_



not modelled 100.0 13
PDB header:structural protein
Chain: A: PDB Molecule:coronin;
PDBTitle: crystal structure of wd40 domain from toxoplasma gondii coronin
50c2pm9A_



not modelled 100.0 15
PDB header:protein transport
Chain: A: PDB Molecule:protein transport protein sec31;
PDBTitle: crystal structure of yeast sec13/31 vertex element of the copii2 vesicular coat
51c4ci8B_



not modelled 100.0 11
PDB header:structural protein
Chain: B: PDB Molecule:echinoderm microtubule-associated protein-like 1;
PDBTitle: crystal structure of the tandem atypical beta-propeller domain of eml1
52c3lrvA_



not modelled 100.0 11
PDB header:splicing
Chain: A: PDB Molecule:pre-mrna-splicing factor 19;
PDBTitle: the prp19 wd40 domain contains a conserved protein interaction region2 essential for its function.
53c4pswB_



not modelled 100.0 14
PDB header:transferase
Chain: B: PDB Molecule:histone acetyltransferase type b subunit 2;
PDBTitle: crystal structure of histone acetyltransferase complex
54c3jrpA_



not modelled 100.0 12
PDB header:transport protein, structural protein
Chain: A: PDB Molecule:fusion protein of protein transport protein sec13 and
PDBTitle: sec13 with nup145c (aa109-179) insertion blade
55c4uerb_



not modelled 100.0 10
PDB header:translation
Chain: B: PDB Molecule:us2;
PDBTitle: 40s-eif1-eif1a-eif3-eif3j translation initiation complex from2 lachancea kluyveri
56c3cfvA_



not modelled 100.0 15
PDB header:histone/chaperone
Chain: A: PDB Molecule:histone-binding protein rbbp7;
PDBTitle: structural basis of the interaction of rbap46/rbap48 with histone h4
57d1sq9a_



not modelled 100.0 16
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
58c4h5jB_



not modelled 100.0 13
PDB header:protein transport
Chain: B: PDB Molecule:guanine nucleotide-exchange factor sec12;
PDBTitle: crystal structure of the guanine nucleotide exchange factor sec12 (p642 form)
59c5vljB_



not modelled 100.0 11
PDB header:motor protein
Chain: B: PDB Molecule:nuclear distribution protein pac1;
PDBTitle: cryo-em structure of yeast cytoplasmic dynein with walker b mutation2 at aaa3 in presence of atp-vo4
60d1ospo_



not modelled 100.0 16
Fold:open-sided beta-meander
Superfamily:Outer surface protein
Family:Outer surface protein
61d1tbga_



not modelled 100.0 12
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
62c4u7aA_



not modelled 100.0 14
PDB header:protein binding
Chain: A: PDB Molecule:ribosome biogenesis protein erb1;
PDBTitle: the carboxy-terminal domain of erb1 is a seven-bladed beta-propeller2 that binds rna.
63c4zoyA_



not modelled 100.0 20
PDB header:chaperone
Chain: A: PDB Molecule:sqt1;
PDBTitle: crystal structure of the chaetomium thermophilum sqt1
64c6bx3B_



not modelled 100.0 12
PDB header:gene regulation/transferase
Chain: B: PDB Molecule:compass component swd1;
PDBTitle: structure of histone h3k4 methyltransferase
65c3acpA_



not modelled 100.0 14
PDB header:chaperone
Chain: A: PDB Molecule:wd repeat-containing protein ygl004c;
PDBTitle: crystal structure of yeast rpn14, a chaperone of the 19s regulatory2 particle of the proteasome
66c5o9zL_



not modelled 100.0 15
PDB header:splicing
Chain: L: PDB Molecule:wd40 repeat-containing protein smu1;
PDBTitle: cryo-em structure of a pre-catalytic human spliceosome primed for2 activation (b complex)
67c2pbiB_



not modelled 100.0 14
PDB header:signaling protein
Chain: B: PDB Molecule:guanine nucleotide-binding protein subunit beta 5;
PDBTitle: the multifunctional nature of gbeta5/rgs9 revealed from its crystal2 structure
68c6eojD_



not modelled 100.0 12
PDB header:rna binding protein
Chain: D: PDB Molecule:polyadenylation factor subunit 2,polyadenylation factor
PDBTitle: polya polymerase module of the cleavage and polyadenylation factor2 (cpf) from saccharomyces cerevisiae
69c3ow8A_



not modelled 100.0 12
PDB header:transcription
Chain: A: PDB Molecule:wd repeat-containing protein 61;
PDBTitle: crystal structure of the wd repeat-containing protein 61
70c4a11B_



not modelled 100.0 13
PDB header:dna binding protein
Chain: B: PDB Molecule:dna excision repair protein ercc-8;
PDBTitle: structure of the hsddb1-hscsa complex
71c3ei4D_



not modelled 100.0 14
PDB header:dna binding protein
Chain: D: PDB Molecule:dna damage-binding protein 2;
PDBTitle: structure of the hsddb1-hsddb2 complex
72c6bm0B_



not modelled 100.0 14
PDB header:protein binding
Chain: B: PDB Molecule:pre-mrna 3' end processing protein wdr33;
PDBTitle: cryo-em structure of human cpsf-160-wdr33 complex at 3.8 a resolution
73c3iz6a_



not modelled 100.0 14
PDB header:ribosome
Chain: A: PDB Molecule:40s ribosomal protein sa (s2p);
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
74c4lg9A_



not modelled 100.0 16
PDB header:unknown function
Chain: A: PDB Molecule:f-box-like/wd repeat-containing protein tbl1xr1;
PDBTitle: crystal structure of tbl1xr1 wd40 repeats
75c3i2nA_



not modelled 99.9 13
PDB header:transcription
Chain: A: PDB Molecule:wd repeat-containing protein 92;
PDBTitle: crystal structure of wd40 repeats protein wdr92
76c6e29C_



not modelled 99.9 15
PDB header:protein binding
Chain: C: PDB Molecule:swd1-like protein;
PDBTitle: crystal structure of myceliophteria_thermophila cps50 (swd1) beta-2 propeller domain
77c3ei3B_



not modelled 99.9 14
PDB header:dna binding protein
Chain: B: PDB Molecule:dna damage-binding protein 2;
PDBTitle: structure of the hsddb1-drddb2 complex
78c5cxcA_



not modelled 99.9 14
PDB header:protein binding
Chain: A: PDB Molecule:ribosome biogenesis protein ytm1;
PDBTitle: structure of ytm1 bound to the c-terminal domain of erb1 in p 65 2 22 space group
79c3fm0A_



not modelled 99.9 15
PDB header:biosynthetic protein
Chain: A: PDB Molecule:protein ciao1;
PDBTitle: crystal structure of wd40 protein ciao1
80c3jzhA_



not modelled 99.9 14
PDB header:gene regulation
Chain: A: PDB Molecule:polycomb protein eed;
PDBTitle: eed-h3k79me3
81c5ganH_



not modelled 99.9 20
PDB header:transcription
Chain: H: PDB Molecule:u4/u6 small nuclear ribonucleoprotein prp4;
PDBTitle: the overall structure of the yeast spliceosomal u4/u6.u5 tri-snrnp at2 3.7 angstrom
82c5nnzB_



not modelled 99.9 14
PDB header:transport protein
Chain: B: PDB Molecule:dynein assembly factor with wdr repeat domains 1;
PDBTitle: crystal structure of human oda16
83c4zovB_



not modelled 99.9 14
PDB header:chaperone
Chain: B: PDB Molecule:ribosome assembly protein sqt1;
PDBTitle: crystal structure of the saccharomyces cerevisiae sqt1
84d1gxra_



not modelled 99.9 10
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
85c3dw8B_



not modelled 99.9 13
PDB header:hydrolase/hydrolase inhibitor
Chain: B: PDB Molecule:serine/threonine-protein phosphatase 2a 55 kda regulatory
PDBTitle: structure of a protein phosphatase 2a holoenzyme with b55 subunit
86c3mmyE_



not modelled 99.9 14
PDB header:nuclear protein
Chain: E: PDB Molecule:mrna export factor;
PDBTitle: structural and functional analysis of the interaction between the2 nucleoporin nup98 and the mrna export factor rae1
87c4xyhA_



not modelled 99.9 15
PDB header:chaperone
Chain: A: PDB Molecule:kinetochore protein mis16;
PDBTitle: wild-type full length mis16 in schizosaccharomyces japonicus
88d1yfqa_



not modelled 99.9 15
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:Cell cycle arrest protein BUB3
89c5a31R_



not modelled 99.9 11
PDB header:cell cycle
Chain: R: PDB Molecule:the anaphase-promoting complex chain r;
PDBTitle: structure of the human apc-cdh1-hsl1-ubch10 complex.
90c5wjcA_



not modelled 99.9 14
PDB header:protein binding
Chain: A: PDB Molecule:kinetochore protein mis16;
PDBTitle: crystal structure of schizosaccharomyces pombe mis16 in complex with2 eic1
91c5cykB_



not modelled 99.9 17
PDB header:protein binding
Chain: B: PDB Molecule:ribosome biogenesis protein erb1;
PDBTitle: structure of ytm1 bound to the c-terminal domain of erb1-r486e
92c5mqfE_



not modelled 99.9 14
PDB header:splicing
Chain: E: PDB Molecule:pre-mrna-processing factor 17;
PDBTitle: cryo-em structure of a human spliceosome activated for step 2 of2 splicing (c* complex)
93c5sumA_



not modelled 99.9 6
PDB header:ribosomal protein
Chain: A: PDB Molecule:ribosome biogenesis protein nsa1;
PDBTitle: ribosome assembly factor nsa1
94c2qxvA_



not modelled 99.9 14
PDB header:gene regulation
Chain: A: PDB Molecule:embryonic ectoderm development;
PDBTitle: structural basis of ezh2 recognition by eed
95c3dwlH_



not modelled 99.9 11
PDB header:structural protein
Chain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1;
PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit
96c5gvaA_



not modelled 99.9 15
PDB header:replication
Chain: A: PDB Molecule:wd repeat and hmg-box dna-binding protein 1;
PDBTitle: wd40 domain of human and-1
97c5h64b_



not modelled 99.9 15
PDB header:transferase
Chain: B: PDB Molecule:regulatory-associated protein of mtor;
PDBTitle: cryo-em structure of mtorc1
98c3zwlB_



not modelled 99.9 12
PDB header:translation
Chain: B: PDB Molecule:eukaryotic translation initiation factor 3 subunit i;
PDBTitle: structure of eukaryotic translation initiation factor eif3i complex2 with eif3b c-terminus (655-700)
99d1vyhc1



not modelled 99.9 17
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
100c2gnqA_



not modelled 99.9 13
PDB header:transcription
Chain: A: PDB Molecule:wd-repeat protein 5;
PDBTitle: structure of wdr5
101c4av9A_



not modelled 99.9 11
PDB header:lipid binding protein
Chain: A: PDB Molecule:svp1-like protein 2;
PDBTitle: kluyveromyces lactis hsv2
102c2ovqB_



not modelled 99.9 14
PDB header:transcription/cell cycle
Chain: B: PDB Molecule:f-box/wd repeat protein 7;
PDBTitle: structure of the skp1-fbw7-cyclinedegc complex
103c4czvB_



not modelled 99.9 12
PDB header:gene regulation
Chain: B: PDB Molecule:pab-dependent poly(a)-specific ribonuclease subunit pan2;
PDBTitle: structure of the neurospora crassa pan2 wd40 domain
104c4noxA_



not modelled 99.9 10
PDB header:translation
Chain: A: PDB Molecule:eukaryotic translation initiation factor 3 subunit b;
PDBTitle: structure of the nine-bladed beta-propeller of eif3b
105c3jcrD_



not modelled 99.9 13
PDB header:splicing
Chain: D: PDB Molecule:u5-40k;
PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
106c2vduB_



not modelled 99.9 14
PDB header:transferase
Chain: B: PDB Molecule:trna (guanine-n(7)-)-methyltransferase-
PDBTitle: structure of trm8-trm82, the yeast trna m7g methylation2 complex
107c5k19C_



not modelled 99.9 16
PDB header:unknown function
Chain: C: PDB Molecule:wd repeat-containing protein 20;
PDBTitle: crystal structure of wd repeat-containing protein 20
108d1erja_



not modelled 99.9 11
Fold:7-bladed beta-propeller
Superfamily:WD40 repeat-like
Family:WD40-repeat
109c3w15A_



not modelled 99.9 20
PDB header:protein transport
Chain: A: PDB Molecule:peroxisomal targeting signal 2 receptor;
PDBTitle: structure of peroxisomal targeting signal 2 (pts2) of saccharomyces2 cerevisiae 3-ketoacyl-coa thiolase in complex with pex7p and pex21p
110c4ui9R_



not modelled 99.9 14
PDB header:cell cycle
Chain: R: PDB Molecule:fizzy-related protein homolog;
PDBTitle: atomic structure of the human anaphase-promoting complex
111c3bwsA_



not modelled 99.9 8
PDB header:unknown function
Chain: A: PDB Molecule:protein lp49;
PDBTitle: crystal structure of the leptospiral antigen lp49
112c4yhcA_



not modelled 99.9 12
PDB header:structural protein
Chain: A: PDB Molecule:sterol regulatory element-binding protein cleavage-
PDBTitle: crystal structure of the wd40 domain of scap from fission yeast
113c1vyhT_



not modelled 99.9 13
PDB header:hydrolase
Chain: T: PDB Molecule:platelet-activating factor acetylhydrolase ib
PDBTitle: paf-ah holoenzyme: lis1/alfa2
114c4gqbB_



not modelled 99.9 18
PDB header:transferase/protein binding
Chain: B: PDB Molecule:methylosome protein 50;
PDBTitle: crystal structure of the human prmt5:mep50 complex
115c4i79B_



not modelled 99.9 14
PDB header:cell cycle
Chain: B: PDB Molecule:nucleoporin nup43;
PDBTitle: crystal structure of human nup43
116c5ov3B_



not modelled 99.9 12
PDB header:structural protein
Chain: B: PDB Molecule:retinoblastoma-binding protein 5;
PDBTitle: structure of the rbbp5 beta-propeller domain
117c4g56B_



not modelled 99.9 18
PDB header:transferase
Chain: B: PDB Molecule:mgc81050 protein;
PDBTitle: crystal structure of full length prmt5/mep50 complexes from xenopus2 laevis
118c4d0kA_



not modelled 99.9 15
PDB header:gene regulation
Chain: A: PDB Molecule:a-specific ribonuclease subunit pan2;
PDBTitle: complex of chaetomium thermophilum pan2 (wd40-cs1) with pan3 (c-term)
119c4j8bA_



not modelled 99.9 14
PDB header:protein transport
Chain: A: PDB Molecule:coatomer alpha subunit;
PDBTitle: crystal structure of alpha-cop/emp47p complex
120c5m89B_



not modelled 99.9 11
PDB header:splicing
Chain: B: PDB Molecule:spliceosome wd40 sc;
PDBTitle: spliceosome component

Binding site prediction 

The overall confidence in the final model (63% modelled at >90% confidence) was considered too low (<70%) for submission to 3DLigandSite

You may manually submit your model to 3DLigandSite, but please be aware that results may be misleading

Multi-template and ab initio information 

8 templates were selected to model your protein based on heuristics to maximise confidence, percentage identity and alignment coverage. Below is a table indicating where your sequence was covered by each template, colour-coded by the confidence of the match to that template overall.

333 residues were modelled by ab initio. Please note: ab initio modelling is highly unreliable.

 
TemplateConfidence1....................................................................................................
c4ui9I_99% 



































































































c3jroA_100% 



































































































c5a5uB_100% 


































































                                 
c5a1vK_100% 





























































                                      
c4yczA_100% 

































































                                  
c4bzkA_100% 

































                                               

















 
c2j04B_100% 
                                                                                                   
c3dm0A_100% 





















                   








                             














      
 
TemplateConfidence101....................................................................................................
c4ui9I_99% 



































































































c3jroA_100% 
                                                       


























                 
c5a5uB_100%                                                                                                     
c5a1vK_100%                                                          




























              
c4yczA_100%                                                         


























                 
c4bzkA_100%                                                                                                     
c2j04B_100%                                                                 

















                  
c3dm0A_100%                                                                                                     
 
TemplateConfidence201....................................................................................................
c4ui9I_99% 



















                                                                                
c3jroA_100%                                                                                                     
c5a5uB_100%                                                                                                     
c5a1vK_100%    










                                                                                      
c4yczA_100%     









                                                                                      
c4bzkA_100%                                                                                                     
c2j04B_100%                                                                                                     
c3dm0A_100%                                                                                                     
 
TemplateConfidence301....................................................................................................
c4ui9I_99%                                                                                                     
c3jroA_100%                                                                                        












c5a5uB_100%                                     
                                                               
c5a1vK_100%                                                                                              






c4yczA_100%   
                                         























































c4bzkA_100%                                                                                          










c2j04B_100%                                                                                              






c3dm0A_100%                 
                            






















































 
TemplateConfidence401....................................................................................................
c4ui9I_99%                                                                                                     
c3jroA_100% 



































































































c5a5uB_100%                                                                            




              





c5a1vK_100% 



































































































c4yczA_100% 



































































































c4bzkA_100% 



































































































c2j04B_100% 



































































































c3dm0A_100% 



































































































 
TemplateConfidence501....................................................................................................
c4ui9I_99%                                                                              






















c3jroA_100% 



































































































c5a5uB_100% 



































































































c5a1vK_100% 



































































































c4yczA_100% 



































































































c4bzkA_100% 



































































































c2j04B_100% 



































































































c3dm0A_100% 



































































































 
TemplateConfidence601....................................................................................................
c4ui9I_99% 



































































































c3jroA_100% 



































































































c5a5uB_100% 



































































































c5a1vK_100% 



































































































c4yczA_100% 



































































































c4bzkA_100% 



































































































c2j04B_100% 



































































































c3dm0A_100% 



































































































 
TemplateConfidence701....................................................................................................
c4ui9I_99% 



































































































c3jroA_100% 



































































































c5a5uB_100% 



































































































c5a1vK_100% 



































































































c4yczA_100% 



































































































c4bzkA_100% 



































































































c2j04B_100% 



































































































c3dm0A_100% 



































































































 
TemplateConfidence801....................................................................................................
c4ui9I_99% 



































































































c3jroA_100% 



































































































c5a5uB_100% 



































































































c5a1vK_100% 



































































































c4yczA_100% 



































































































c4bzkA_100% 



































































































c2j04B_100% 



































































































c3dm0A_100% 



































































































 
TemplateConfidence901.........
c4ui9I_99% 







c3jroA_100% 







c5a5uB_100% 







c5a1vK_100% 







c4yczA_100% 







c4bzkA_100% 







c2j04B_100% 







c3dm0A_100%