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Job Descriptionexo99____
Confidence99.95%DateMon Feb 25 17:28:45 GMT 2019
Rank80Aligned Residues243
% Identity14%Templatec3jzhA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:polycomb protein eed; PDBTitle: eed-h3k79me3
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110..... ....120.........130...... ...140........
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Query Sequence  QWLNLPSTEPLSSVEWCEGS. . . . . . LLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCL
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Template Sequence  NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADE
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   86...90.........100.........110.........120.........130.........140.....
 
   149150 .........160.........170. ........180.....
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Query Sequence  VC. . . . . . . . . SEEQTPVGDIVVPPSKHAVST. . . . . . . . . . . . . . LVRCVRSNAAVCSS
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Template Sequence  NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNL
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   146...150.........160.........170.........180.........190.........200.....
 
   186...190.........200...
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Query Sequence  SVVAVCDSRAMVWDVKGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRI
Template Known Secondary structure  TTS
TTTT
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   206...210.........220.........230.........240.........250.........260.....
 
   204.....210.........220.........230.........240...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . TQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTG
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Template Sequence  NSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDL. . . ILSK
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   266...270.........280.........290.........300.........310........ .320..
 
   244.....250.........260...... ...270.........280.........290.
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Query Sequence  SYSGSLVFTDIRTKEGSTSKLSL. . . . . . . . . . . . PARRGCMARCADFNTLLPFALATAS
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Template Sequence  SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF. WQKMLALGN
Template Known Secondary structure  SSSSSTT

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   323......330.........340.........350.........360.........370.. .......380.
 
   292.......300.........310... ......320.........330.........340....
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Query Sequence  SDGIISVFDCRYPSTAVRTIPS. . . . . . LHGDIMSLKYLKLHSDIIATGGVDGSVVLWN
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Template Sequence  QVGKLYVWDLE. VEDPHKAKCTTLTHHKCGAAIRQTSFSR. DSSILIAVCDDASIWRWD
Template Known Secondary structure  TTS


.SSSGGG


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   382.......390.. .......400.........410.........420 .........430........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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