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Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank83Aligned Residues251
% Identity14%Templatec4zovB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:ribosome assembly protein sqt1; PDBTitle: crystal structure of the saccharomyces cerevisiae sqt1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.... .....120.........130.... .....140........
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Query Sequence  KMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQT. . . VEDSDGELQRRTCL
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Template Sequence  NSLTYFDKHTDSVFAIGHHPNLPLVCTGGGDNLAHLWTSHSQPPKFAGTLTGYGESVISC
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SS

SSSSTTS
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SS
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   56...60.........70.........80.........90.........100.........110.....
 
   149150.........160.........170.........180.
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Query Sequence  VCSEEQTPVGDIVVPPSKHAVSTLVRCVRSNAA. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SFTSEGGFLVTADMSGKVLVHMGQKGGAQWKLASQMQEVEEIVWLKTHPTIARTFAFGAT
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TTSSTTS
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   116...120.........130.........140.........150.........160.........170.....
 
   182.......190.........200
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VCSSSVVAVCDSRAMVWDV
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Template Sequence  DGSVWCYQINEQDGSLEQLMSGFVHQQDCSMGEFINTDKGENTLELVTCSLDSTIVAWNC
Template Known Secondary structure  TS

TTT




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TTS
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   176...180.........190.........200.........210.........220.........230.....
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  KGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGS
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Template Conservation                                       .                      
Template Sequence  FTGQQLFKITQAEIKGLEAPWISLSLAPETLTKGNSG. VVACGSNNGLLAVINCNNGGAI
Template Known Secondary structure  TTT
GGGGTT





GGGTTT
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.TTSTTTTT
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   236...240.........250.........260.........270.. .......280.........290....
 
   261........270.........280...
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Query Sequence  TSKLSLPARRGCMARCADFNTLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LHLSTVIDELDASIESISWSSKFSLMAIGLVCGEILLYDTSAWRVRHKFVLEDSVTKLMF
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TTTTTTTTTT

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   295....300.........310.........320.........330.........340.........350....
 
   284.....290.........300.........310.........320... ......330....
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Query Sequence  . PFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKY. . . . . . . . LKLHSDIIATG
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Template Sequence  DNDDLFASCINGKVYQFNAR. TGQEKFVCVGHNMGVLDFILLHPVANTGTE. QKRKVITA
Template Known Secondary structure  TTTTS
TT.T




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   361........370.........380 .........390.........400.........410 ........
 
   335....340.......
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Query Sequence  GVDGSVVLWNLRS
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Template Sequence  GDEGVSLVFEVPN
Template Known Secondary structure  TTS


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   419420.........430.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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