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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank13Aligned Residues319
% Identity17%Templatec4wjsA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:rsa4; PDBTitle: crystal structure of rsa4 from chaetomium thermophilum
Resolution1.80 Å
Model Dimensions (Å)X:69.143 Y:66.891 Z:46.573

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60......
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Query Sequence  QVPLYVSTSAWRKEVQLRGLLRNHPSIIAHSDILPPATTAKVFSTAQLAAHHRENVLAIG
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Template Sequence  QMTDVVEINFADATEKNISNLLNTLLGRDREEFTPY. . . . . . . . . . RFRIHIPGKDLIID
Template Known Secondary structure  B
S

GGG

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   48.50.........60.........70.........80... ......90.......
 
   67..70.........80.........90........ .100.........110...
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Query Sequence  LNPLSTSGACVGLLTMESAEAKLSGMSKMQWL. . . . . . . . . . . . NLPSTEPLSSVEWCE.
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Template Sequence  QYPNDLLSLLQKHGVTNPFETTITLSAEPQAIFKVHAVSRLAHRIPGHGQPILSCQFSPV
Template Known Secondary structure  S

S
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   98.100.........110.........120.........130.........140.........150.......
 
   114 .....120.........130...... ...140.........150.........160.........170
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Query Sequence  G. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVS
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Template Sequence  SSSRLATGSGDNTARIWDTDSGTPKFTLKGHTGWVLGVSWSPDGKYLATCSMDTTVRVWD
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TTTTS
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   158.160.........170.........180.........190.........200.........210.......
 
   171........180 .........190.........200...
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Query Sequence  TLVRCVRSNA. . . . . . . . . . . . . . . . . . . . AVCSSSVVAVCDSRAMVWDVKGA. . . . . . .
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Template Sequence  PESGKQVNQEFRGHAKWVLALAWQPYHLWRDGTARLASASKDCTVRIWLVNTGRTEHVLS
Template Known Secondary structure  TTTT
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BTTB
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   218.220.........230.........240.........250.........260.........270.......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  GHKGSVSCVKWGGTDLIYTGSHDRSVRVWDAVKGTLVHNFTAHGHWVNHIALSSDHVLRT
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TTSTTS
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   278.280.........290.........300.........310.........320.........330.......
 
   204.....210.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TQPVHTWVPSVDSS
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Template Conservation                                       
                      
Template Sequence  AYHDHTKEVPGTEEERRAKAKERFEKAAKIKGKVAERLVSASDDFTMYLWDPTNNGSKPV
Template Known Secondary structure  TT

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SSTT


TTS

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   338.340.........350.........360.........370.........380.........390.......
 
   218.220.........230.........240.........250.........260.........270.......
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Query Sequence  KNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCA
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Template Sequence  ARLLGHQNKVNHVQFSPDGT. LIASAGWDNSTKLWNARDGKF. . . . IKNLRGHVAPVYQC
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   398.400.........410....... ..420.........430........ .440.........450..
 
   278.280.........290.........300.........310.........320.........330.......
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Query Sequence  DFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVD
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Template Sequence  AWSA. DSRLVVTGSKDCTLKVWNVR. TGKLAMDLPGHEDEVYAVDWAA. DGELVASGGKD
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T.TSSTTS
TT.TT


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   453... ...460.........470...... ...480.........490........ .500.........
 
   338.340...
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Query Sequence  GSVVLW
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Template Sequence  KAVRTW
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   510.....
 
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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