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Job Descriptionexo99____
Confidence95.95%DateMon Feb 25 17:28:45 GMT 2019
Rank342Aligned Residues183
% Identity10%Templatec4maeB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:methanol dehydrogenase; PDBTitle: methanol dehydrogenase from methylacidiphilum fumariolicum solv
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230
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Query Sequence  SSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFA. . . . . . . . . . . . .
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Template Sequence  PCLVHFDRNGFGYVLDRRTGQLIEAQPFVYVNWAKEISKENDRPVEIPEKRTKQGVDTKG
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   319320.........330.........340.........350.........360.........370........
 
   231........240.........250.........260.........270......
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Query Sequence  . . . . . . . . . . . . . . QWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARC
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Template Sequence  ICPNSMGGKDQQPAAFSPQTG. LFYVPTNNMCMNYEGVEATYTAGAP. . . . . . . . . . YVG
Template Known Secondary structure  SS
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   379380.........390......... 400.........410.........420.... ...
 
   277..280.........290.........300.........310.........320.........330......
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Query Sequence  ADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGV
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Template Sequence  ANVLM. YSGHEGKDDYYGAFICYDAL. KGKRVWEIHEHFPVWSGPVVTA. . GGLAFYGTM
Template Known Secondary structure  .T
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TT.TTSS


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   428.430.. .......440.........450.. .......460.........470.... .....480...
 
   337..340.........350.........360.........370.........380...
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Query Sequence  DGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGG
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Template Sequence  DGWFKAVDIKTGKV. . LWQQKLGSGIIGNPITFLGPDKKQYVAVYSG
Template Known Secondary structure  TSTTT

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   484.....490....... ..500.........510.........520........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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