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Job Descriptionexo99____
Confidence99.71%DateMon Feb 25 17:28:45 GMT 2019
Rank218Aligned Residues305
% Identity14%Templated1nira2
SCOP info8-bladed beta-propeller C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80... ......90.........100 .........110.... .....120.....
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Query Sequence  LSTSGACVGLLTME. SAEAKLSGMSKMQWLNL. PSTEPLSSVEWCEG. . SLLVGTSRGRI
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Template Sequence  NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARI
Template Known Secondary structure  S


GGGGGGTTTT


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   143......150.........160.........170.........180.........190.........200..
 
   126...130... ......140.........150.........160. ........170.....
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Query Sequence  VVADVSPQ. . . . . . TVEDSDGELQRRTCLVCSEEQTPVGDIV. VPPSKHAVSTLVRC. . .
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Template Sequence  DMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ
Template Known Secondary structure  TTSSS


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   203......210.........220.........230.........240.........250.........260..
 
   176...180.........190.........200.........210...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . VRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPS
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Template Sequence  IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID. . . . . . . . .
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SSS

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SSSSTTTT
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   263......270.........280.........290.........300.........310...
 
   214.....220.........230.........240.........250.........260.........270...
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Query Sequence  VDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCM
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Template Sequence  . NLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR
Template Known Secondary structure  .S


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   314.....320.........330.........340.........350.........360.........370..
 
   274.....280.........290.........300.... .....310.........320.......
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Query Sequence  ARCADFNTLLPFALATASSDGIISVFDCRYP. . . . . . STAVRTIPSLHGDIMSLKYLKLH
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Template Sequence  GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP. K
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TTTBSSSS

TTT
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   373......380.........390.........400.........410.........420.........430 .
 
   328.330... ......340.........350...... ...360.........370..
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Query Sequence  SDIIAT. . . . . . . GGVDGSVVLWNLRSLPTYRVGRA. . . . . . . . QYKCPVFDLITTPWSV
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Template Sequence  SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK. . R
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TT
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   432.......440.........450.........460.........470.........480........ .
 
   373.... ..380.......
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Query Sequence  EQHVI. . . . . GVTCGGELTL
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Template Sequence  GDEVWFSVWNGKNDSSALVV
Template Known Secondary structure  SS

TTS

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   490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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