|   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
. | . | . | . | . | . | 90 | . | |
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
. | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Query Sequence |   |
V | L | A | I | G | L | N | P | L | S | T | S | G | A | C | V | G | L | L | T | M | E | . |
S | A | E | A | K | L | S | G | . |
. |
. |
M | S | K | M | Q | W | L | N | L | P | S | T | E | P | L | S | S | V | E | W | C | E | G | . |
S | L |
Query Conservation |   |
  |   |
|
|   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|
|   |
| . |
|
|
|   |   |
|
|
| . | . | . |
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
| . |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
T | S | A | N | R | V | N | C | L | V | P | V | D | G | G | R | K | L | V | Y | G | T | D | S | G | I | F | I | S | E | R | W | P | K | D | K | S | A | K | P | R | R | V | L | D | A | S | Q | V | T | Q | I | D | T | L | E | E | Y | Q | L |
Template Known Secondary structure |   |
B | T | T | B |
|  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | S | S |  |  |  |  |  |  | S | S |
| S | S | T | T |
|
|
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  | G | G | G | T |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
873 | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . |
  |
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | G | T | S | R | G | R | I | V | V | A | D | V | S | P | Q | T | V | E | D | S | D | G | E | L | Q | R | R | T | C | L | V | C | S | E | E | Q | T | P | V | G | D | I | V | V | P | P | S | K | H | A | V | S | T | L | V | R | C | V |
Query Conservation |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |
|   |   |   |   |
|
|
|   |
|   |
|
|   |   |
|   |
|
|
|   |   |
|
|   |
|   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |
|
|
|   |   |
|   |   |   |   |
| . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
L | L | V | L | A | N | K | T | L | S | S | Y | P | M | . |
. |
E | A | L | E | L | A | E | G | Q | N | S | V | A | K | R | P | K | K | I | Q | G | H | A | N | F | F | K | A | G | I | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  | G | . | . | G | G | G |
| T | T |
|
| T | T |
| G | G | G |
|
|  |  |  |  | S | S |
| S |  |  |  |  |  |  |
| S | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
933 | . | . | . | . | . | . | 940 | . | . | . | . | . | . | |
|
. | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | N | A | A | V | C | S | S | S | V | V | A | V | C | D | S | R | A | M | V | W | D | V | K | G | A | T | Q | P | V | H | T | W | V | P | S | V | D | S | S | K | N | S | P | N | E | Q | E | P | L | L | F | A | Q | W | V | P | N | S |
Query Conservation |   |
  |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   | . |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
G | R | H | L | V | C | S | V | K | T | S | A | L | S | S | T | I | K | V | Y | E | P | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | P | F | K | E | Y | . |
Y | I | P | A | E | S | S | S | I | H | F | L | R | S | T |
Template Known Secondary structure |   |
. | . | . | . | . | S | S |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |  | S | S |
|  |  |  |  |  |  |  | T | T |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
979 | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | |
. | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . |
  |
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | S | V | V | L | T | G | S | Y | S | G | S | L | V | F | T | D | I | R | T | K | E | G | S | T | S | K | L | S | L | P | A | R | R | G | C | M | A | R | C | A | D | F | N | T | L | L | P | F | A | L | A | T | A | S | S | D | G | I | I |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |
|   |
|
|   | . |   |   |   |   |   |
|   |
|
|   |   |   |   |   | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|
|   |   |   |   |   |
|   |
|   |
Template Sequence |   |
. |
. |
. |
L | C | V | G | C | . |
A | R | G | F | E | V | V | S | L | E | T | T | E | T | . |
. |
. |
. |
Q | S | L | L | D | Q | A | D | T | S | L | D | F | V | A | R | K | E | . |
N | V | K | P | I | H | I | E | R | M | N | G | E | F |
Template Known Secondary structure |   |
. | . | . |  |  |  |  |  | . | T | T |  |  |  |  |  |  | S | S | S |
|
|  | . | . | . | . |  |  | S | S |
| T | T |
| G | G | G |  |  |  |  |  | S |
| . | S |
|
|  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
. | . | . |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
1046 | . | . | . | 1050 | |
. | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | |
|
|
|
. | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | |
. | . | . | . | . | . | . | 1090 | . | . | . | . | . | . |
  |
  |   |
297 | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | F | D | C | R | Y | P | S | T | A | V | R | T | I | P | S | L | H | G | D | I | M | S | L | K | Y | L | K | L | H | S | D | I | I | A | T | . |
. |
. |
. |
. |
. |
G | G | V | D | G | S | V | V | L | W | N | L | R | S |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   | . |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   | . |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |
Template Sequence |   |
L | L | N | Y | S | D | . |
F | S | F | F | V | N | R | N | G | W | R | A | R | P | D | W | K | I | S | W | E | G | . |
N | P | N | A | F | A | L | S | Y | P | Y | I | L | A | F | E | P | N | F | I | E | I | R | H | I | E | T |
Template Known Secondary structure |   |
 |  |  |  | S | S | . |  |  |  |  |  |
| S | S | S |
| B | S | S | T | T |
|
|  |  |
| S | S | . |
|
| S |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1097 | . | . | 1100 | . | . | |
. | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | |
. | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . |
  |