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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank135Aligned Residues245
% Identity15%Templatec3jb9L_
PDB info PDB header:rna binding protein/rnaChain: L: PDB Molecule:pre-mrna-splicing factor cwf17; PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.... .....120.........130...... ...140.........150..
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Query Sequence  QWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSE
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Template Sequence  NLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFDVKNYGVLNGCKGAITDLQWSR
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   43......50.........60.........70.........80.........90.........100..
 
   153......160.........170......... 180.........190.........
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Query Sequence  EQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAVCSSSVVAVCDSRAMVWD
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Template Sequence  DSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVSELLTSVSDDCTMKVWD
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   104.....110.........120.........130.........140.........150.........160...
 
   200......... 210.........220.........
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Query Sequence  VKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSVDSSKNSPNEQEPLLF
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Template Sequence  SRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITS
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   165....170.........180.........190.........200.........210.........220....
 
   230.........240.........250.........260.........270.........280.........
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Query Sequence  AQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALAT
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Template Sequence  LAISKDGS. SLLSNSMDNTVRIFDVKAQRQLQIFEGAIHGQEHNLLGVAWSR. NSRFVGA
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   225....230.. .......240.........250.........260.........270..... ....280..
 
   290.........300.........310.........320.........330.........340.....
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Query Sequence  ASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNL
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Template Sequence  GSSDKNVYVWSA. . TGDLRYVLPGHEGSVNHVDFHP. HQDIILSCSSDRTIFLGEL
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   287..290........ .300.........310.........320 .........330.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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