Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence26.25%DateMon Feb 25 17:28:45 GMT 2019
Rank407Aligned Residues127
% Identity11%Templatec4fhmB_
PDB info PDB header:structural protein/oxidoreductaseChain: B: PDB Molecule:nucleoporin nup120; PDBTitle: nup37-nup120(aa1-961) complex from schizosaccharomyces pombe
Resolution4.34 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   180.........190.........200.. .......210.........220..
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Query Sequence  AAVCSSSVVAVCDSRAMVWDVKG. . . . . . . . . . . . . . . . . ATQPVHTWVPSVDSSKNSPN
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Template Sequence  MKDGVAFSFSEHSDTTIIYAITHARVLYYIRLSKTWFQLPDARLDDDWCLCYRPISFLNQ
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   111........120.........130.........140.........150.........160.........170
 
   223......230.........240.........250.. .......260.........270.
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Query Sequence  EQEPLLFAQWVPNSDSVVLTGSYSGSLVFT. . . . . . . . . . . DIRTKEGSTSKLSLPARRG
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Template Sequence  KPDLMAAI. . . . STSEICVSFFNGGLTKIILNPKDASHYEQHIDDSKKYLSLQAFKADYR
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   171....... .180.........190.........200.........210.........220......
 
   272 .......280.........290.........300.........310..
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Query Sequence  C. . MARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIP
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Template Sequence  SPNTIISMIFLS. TYNVLVMLSLDYKLKVLDLS. TNQCVETIE
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   233......240.... .....250.........260.... .....270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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