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Job Descriptionexo99____
Confidence99.90%DateMon Feb 25 17:28:45 GMT 2019
Rank182Aligned Residues242
% Identity14%Templatec5k0yT_
PDB info PDB header:translationChain: T: PDB Molecule:eukaryotic translation initiation factor 3 subunit i; PDBTitle: m48s late-stage initiation complex, purified from rabbit reticulocytes2 lysates, displaying eif2 ternary complex and eif3 i and g subunits3 relocated to the intersubunit face
Resolution5.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.... .....120.........130...... ...140.........150..
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Query Sequence  QWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSE
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Template Sequence  PILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADW
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   3......10.........20.........30.........40.........50.........60..
 
   153......160.........170......... 180.........190.........200
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Query Sequence  EQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . AAVCSSSVVAVCDSRAMVWDV
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Template Sequence  DTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFV
Template Known Secondary structure  SSSSSSTTT


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   63......70.........80.........90.........100.........110.........120..
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  KGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGS
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Template Sequence  SFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGE. CIIAGHESGELNQYSAKSGEV.
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   123......130.........140.........150......... 160.........170.........180
 
   261........270.........280.........290.
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Query Sequence  TSKLSLPARRGCMARCADFNTLLPFALATAS. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . LVNVKEHSRQINDIQLSR. EMTMFVTASKDNTAKLFDSTTLEHQKTFRTEPPRELAA
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   181........190........ .200.........210.........220.........230......
 
   292.......300.........310.........320.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . SDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLK
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Template Sequence  LSPNYEHVVVGGGQEAMDVTTTSTRIGKFEARFFHLA. FEEEFGRVKGHFGPINSVAFHP
Template Known Secondary structure  TTTT






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   237..240.........250.........260.........270... ......280.........290.....
 
   326...330.........340.....
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Query Sequence  LHSDIIATGGVDGSVVLWNL
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Template Sequence  . DGKSYSSGGEDGYVRIHYF
Template Known Secondary structure  .TSSSSS

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   296...300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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