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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank12Aligned Residues253
% Identity14%Templatec5tzsT_
PDB info PDB header:translationChain: T: PDB Molecule:utp21; PDBTitle: architecture of the yeast small subunit processome
Resolution5.10 Å
Model Dimensions (Å)X:51.993 Y:59.850 Z:37.940

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EAKLSGMSKMQWLNLPSTEPLSSVEWCEG. . . . . . . SLLVGTSRGRIVVADVSPQTVE. .
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Template Sequence  SFSLRKDAQSQEMSQSKFPEIVALAIENARIGEWENIITAHKDEKFARTWDMRNKRVGRW
Template Known Secondary structure  SSTT



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   377..380.........390.........400.........410.........420.........430......
 
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Query Sequence  . DSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAV
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Template Sequence  TFDTTDDGFVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKYKLHKRAVTGISLDGM
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   454.....460.........470.........480.........490.........500.........510...
 
   183......190.........200.........210.........220.........230.........240..
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Query Sequence  CSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLT
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Template Sequence  NRKMVSCGLDGIVGFYDFNKS. . . . . . . . . . . TLLGKLKLDA. PITAMVYHRSSD. LFAL
Template Known Secondary structure  SSTTSSSS
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   514.....520.........530.... .....540.... .....550...... ...560
 
   243......250.........260.........270.........280.........290.........300..
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Query Sequence  GSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCR
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Template Sequence  ALDDLSIVVIDAVTQRV. . . . VRQLWGHSNRITAFDFSP. EGRWIVSASLDSTIRTWDLP
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   561........570....... ..580.........590..... ....600.........610.....
 
   303......310.........320.........330......... 340.........350.........
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Query Sequence  YPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGS. VVLWNLRSLPTYRVGRAQYK
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Template Sequence  . TGGCIDGII. VDNVATNVKFSP. NGDLLATTHVTGNGICIWTNRAQSTRTIDESEFX
Template Known Secondary structure  .TT.
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   616...620.... .....630...... ...640.........650.........660.........670
 
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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