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Job Descriptionexo99____
Confidence99.90%DateMon Feb 25 17:28:45 GMT 2019
Rank179Aligned Residues242
% Identity14%Templatec3j80g_
PDB info PDB header:ribosomeChain: G: PDB Molecule:es6; PDBTitle: cryoem structure of 40s-eif1-eif1a preinitiation complex
Resolution3.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.... .....120.........130.... .....140......
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Query Sequence  QWLNLPSTEPLSSVEWCEG. . . SLLVGTSRGRIVVADVSPQT. . . . . . VEDSDGELQRRT
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Template Sequence  RGTLEGHNGWVTSLSTSAAQPNLLVSGSRDKTLISWRLTENEQQFGVPVRSYKGHSHIVQ
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   11........20.........30.........40.........50.........60.........70
 
   147..150.........160.........170.........180.........190
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Query Sequence  CLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAV. . . . . . . . . . . . . . . .
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Template Sequence  DVVVSADGNYAVSASWDKTLRLWNLATGNSEARFVGHTGDVLSVAIDANSSKIISASRDK
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   71........80.........90.........100.........110.........120.........130
 
   191........200.........210.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CDSRAMVWDVKGATQPVHTWVPSVDSS
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Template Sequence  TIRVWNTVGDCAYVLLGHTDWVTKVRVAPKNLVDDGRITFVSAGMDKIVRSWSLNSYRIE
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   131........140.........150.........160.........170.........180.........190
 
   218.220.........230.........240.........250.........260.........270.......
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Query Sequence  KNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCA
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Template Sequence  ADFIGHNNYINVVQPSPDGS. LAASAGKDGQIYVWNLKHKSAFMNF. . . . . . DAKDEVFA
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   197..200.........210...... ...220.........230.........240. ........
 
   278.280.........290.........300.........310.. .......320.........
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Query Sequence  DFNTLLPFALATASSDGIISVFDCRYPSTAVRTIP. . . . . . . . SLHGDIMSLKYLKLHSD
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Template Sequence  LAFS. PSRFWLTAATASGIKIYDLE. NEVLIDELKPEFAGYTKAQDPHAVSLAWSA. DGQ
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   250... ......260.........270... ......280.........290.........300... ...
 
   330.........340.......
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Query Sequence  IIATGGVDGSVVLWNLRS
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Template Sequence  TLFAGYTDNVIRVWQVMT
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   307..310.........320....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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