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Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank95Aligned Residues280
% Identity11%Templatec3dwlH_
PDB info PDB header:structural proteinChain: H: PDB Molecule:actin-related protein 2/3 complex subunit 1; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit
Resolution3.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80... ......90..... ....100.........110....
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Query Sequence  NVLAIGLNPLSTSGACVGLLTME. SAEAKLSGMSKM. . . . QWLNLPSTEPLSSVEWCEG.
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Template Sequence  HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS
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   8.10.........20.........30.........40.........50.........60.......
 
   115....120.........130.........140.........150.........160.........170...
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Query Sequence  . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLV
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Template Sequence  NRIVTCSQDRNAYVYTWKQTLV. . LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEW
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   68.70.........80......... 90.........100.........110.........120.....
 
   174..... 180.........190.........200..... ....210.....
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Query Sequence  RCVRSN. . . . . . . . . . . . . AAVCSSSVVAVCDSRAMVWDVKGATQ. . . . . PVHTWVPSVD
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Template Sequence  WVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDKPEASVWGSRLPFN
Template Known Secondary structure  B


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   136...140.........150.........160.........170.........180.........190.....
 
   216...220.........230.........240.........250.........260.........270.....
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Query Sequence  SSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMAR
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Template Sequence  TVCAEYPSGGWVHAVGFSPSGN. ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLR
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   197..200.........210........ .220.........230.........240.........250.....
 
   276...280.........290.........300. ........310..
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Query Sequence  CADFNTLLPFALATASSDGIISVFDC. . . . . . . . . . . . . . . . . . . . . . . RYPSTAVRTIP
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Template Sequence  SLLWAN. . ESAIVAAGYNYSPILLQGNEAHTRDLDAGTSKTSFTHTGNTGEGREESSLPT
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   256...260. ........270.........280.........290.........300.........310...
 
   313......320..... ....330.........340.....
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Query Sequence  SLHGDIMSLKYLK. . . LHSDIIATGGVDGSVVLWNL
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Template Sequence  VHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL
Template Known Secondary structure  S
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   342.......350.........360.........370.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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