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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank22Aligned Residues310
% Identity12%Templatec5cvlA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:wd repeat-containing protein 48; PDBTitle: wdr48 (uaf-1), residues 2-580
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   57..60.........70.........80... ......90..... ....100.........110
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Query Sequence  HHRENVLAIGLNPLSTSGACVGLLTME. SAEAKLSGMSKM. . . . . QWLNLPSTEPLSSVE
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Template Sequence  DEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIV
Template Known Secondary structure 
S


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   23......30.........40.........50.........60.........70.........80..
 
   111... .....120.........130...... ...140.........150.........160.......
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Query Sequence  WCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSEEQTPVGDIVVPPSKH
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Template Sequence  LCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIF
Template Known Secondary structure  GGGTTTS
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   83......90.........100.........110.........120.........130.........140..
 
   168.170.........180. ........190.........200.....
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Query Sequence  AVSTLVRCVRSNAA. . . . . . . . . . . . . . . . . . . . . . VCSSSVVAVCDSRAMVWDVKGATQ
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Template Sequence  LWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTC. .
Template Known Secondary structure  S
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   143......150.........160.........170.........180.........190.........200
 
   206...210.........220.........230.........240.........250.........260.....
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Query Sequence  PVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLS
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Template Sequence  . . . . . . . . . AKLMKLKGHTDNVKALLLNRDGT. QCLSGSSDGTIRLWSLGQQRC. . . . IA
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   201........210.........220... ......230.........240.... ..
 
   266...270.........280.........290.........300.........310.........320.....
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Query Sequence  LPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLK
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Template Sequence  TYRVHDEGVWALQVND. AFTHVYSGGRDRKIYCTDLR. NPDIRVLICEEKAPVLKMELDR
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   247..250.........260.. .......270.........280.. .......290.........300....
 
   326.. .330.........340.........350..... ....360.........370
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Query Sequence  LHS. . . DIIATGGVDGSVVLWNLRSLPTYRVGR. . . . . . . . . . . . AQYKCPVFDLITTPW
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Template Sequence  . SADPPPAIWVATTKSTVNKWTLKGIHNFRASGPITPLCTQPDQVIKGGASIIQCHILN.
Template Known Secondary structure  .SSSS

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   305....310.........320.........330.........340.........350.........360..
 
   371........380.......
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Query Sequence  SVEQHVIGVTCGGELTL
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Template Sequence  . DKRHILTKDTNNNVAY
Template Known Secondary structure  .TSSTT

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   371........380......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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