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Job Descriptionexo99____
Confidence99.92%DateMon Feb 25 17:28:45 GMT 2019
Rank154Aligned Residues241
% Identity15%Templatec3jcrL_
PDB info PDB header:splicingChain: L: PDB Molecule:hprp4; PDBTitle: 3d structure determination of the human*u4/u6.u5* tri-snrnp complex
Resolution7.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.... .....120.........130...... ...140.........150.....
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Query Sequence  NLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSEEQT
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Template Sequence  QIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKST
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   227..230.........240.........250.........260.........270.........280......
 
   156...160.........170.........180.
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Query Sequence  PVGDIVVPPSKHAVSTLVRCVRSNAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRS
Template Known Secondary structure  SS
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   287..290.........300.........310.........320.........330.........340......
 
   182.......190.........200.........210.........220...
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Query Sequence  . . . . . . . . . . . . . . . . . . VCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNE
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Template Sequence  WRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH
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   347..350.........360.........370.........380.........390.........400......
 
   224.....230.........240.........250.........260.........270.........280...
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Query Sequence  QEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLL
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Template Sequence  LKEIYGINFSPNGY. HIATGSGDNTCKVWDLRQRR. . . CVYTIPAHQNLVTGVKFEPI. H
Template Known Secondary structure  SS

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   407..410.........420 .........430.........440 .........450.........460 .
 
   284.....290.........300.........310.........320.........330.........340...
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Query Sequence  PFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLW
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Template Sequence  GNFLLTGAYDNTAKIWTHP. GWSPLKTLAGHEGKVMGLDISS. DGQLIATCSYDRTFKLW
Template Known Secondary structure  TTTTT.T
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   462.......470.........480 .........490.........500.. .......510.........
 
   344..
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Query Sequence  NLR
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Template Sequence  MAE
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   520..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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