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Job Descriptionexo99____
Confidence96.32%DateMon Feb 25 17:28:45 GMT 2019
Rank335Aligned Residues144
% Identity10%Templatec6eosB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dipeptidyl peptidase 8; PDBTitle: dpp8 - apo, space group 19
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250..... ....260.........270.......
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Query Sequence  QEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIR. . . . . . TKEGSTSKLSLPARRGCMARCA
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Template Sequence  DLGIASYDYHQGSGTFLFQAGS. . . . GIYHVKDGGPQGFTQQPLRPNLVETSCPNIRMDP
Template Known Secondary structure 


B


B

TTTTB
BTT....
B
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SS

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   137..140.........150........ .160.........170.........180.........190..
 
   278.280.........290.........300.........310.........
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Query Sequence  DFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIM. . . . . . . . . . . . . . . . . .
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Template Sequence  KLCPADPDWIA. FIHSNDIWISNIV. TREERRLTYVHNELANMEEDARSAGVATFVLQEE
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SSSTT.SSSSTT.T







SSS



SSB

T
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   219220......... 230.........240.. .......250.........260.........270......
 
   320......... 330.........340..... ....350.......
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Query Sequence  . . . . . SLKYLKLHSD. . . . . . . . . . IIATGGVDGSVVLWNL. . . . . . . RSLPTYRVGRAQ
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Template Sequence  FDRYSGYWWCP. KAETTPSGGKILRILYEENDESEVEIIHVTSPMLETRRADSFRYPKTG
Template Known Secondary structure  S


B

S.

B

TTS



B
SSS

S
TTT



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   277..280....... ..290.........300.........310.........320.........330.....
 
   358.360.........370....
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Query Sequence  YKCPVFDLITTPWSVEQ
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Template Sequence  TANPKVTFKMSEIMIDA
Template Known Secondary structure  S


B


S
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   336...340.........350..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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