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Job Descriptionexo99____
Confidence99.43%DateMon Feb 25 17:28:45 GMT 2019
Rank247Aligned Residues320
% Identity14%Templatec3pe7A_
PDB info PDB header:lyaseChain: A: PDB Molecule:oligogalacturonate lyase; PDBTitle: oligogalacturonate lyase in complex with manganese
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80..... .... 90.........
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Query Sequence  AKVFSTAQLAAHHRENVLAIGLNPLSTSGACVGLLTMESA. . . . . EAKL. SGMSKMQWLN
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Template Sequence  ASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT
Template Known Secondary structure  TTT


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   17..20.........30.........40.........50.........60.........70......
 
   100.........110.... .....120.........130...... ...140.........150....
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Query Sequence  LPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. . . DSDGELQRRTCLVCSEEQ
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Template Sequence  EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC
Template Known Secondary structure 
SS
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   77..80.........90.........100.........110.........120.........130......
 
   155....160.........170.........180.........190.........200.........210....
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Query Sequence  TPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSV
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Template Sequence  TKLVGIEIRREDWVPLTDWKKFHEFYFTK. . . . . . . PCCRLMRVDLKTGE. . . . . . . . . .
Template Known Secondary structure  SGGG




SGGG
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   137..140.........150.........160..... ....170.........
 
   215....220.........230.........240........ .250.........260........
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Query Sequence  DSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGS. . . . . . LVFTDIRTKEGSTSKLSLPA
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Template Sequence  . . STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN. . . MRKVKTH
Template Known Secondary structure  ..SS
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   180.........190.........200.........210.........220....... ..230....
 
   269270.........280......... 290.........300.........310.........320...
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Query Sequence  RRGCMARCADFNTLLPFALAT. . . . . ASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKY
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Template Sequence  AEGESCTHEFWVP. DGSALVYVSYLKGSPDRFIYSADPE. TL. . ENRQLTSMPACSHLMS
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TT
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   235....240....... ..250.........260.........270.. .. .....280.........290
 
   324.....330......... 340.........350.........360... ......370
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Query Sequence  LKLHSDIIATGGVDGS. . . . VVLWNLRSLPTYRVGRAQYKCPVF. . . . . . . . . DLITTPW
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Template Sequence  NY. DGSLMVGDGSDAENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTP.
Template Known Secondary structure 
T.TSS






TTTT






BTTBSSTT




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   291. .......300.........310.........320.........330.........340........
 
   371........380 .... .....390....
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Query Sequence  SVEQHVIGVT. CGGE. . LTLTGLAQEA
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Template Sequence  . DDKQILFTSDVHGKPALYLATLPESV
Template Known Secondary structure  .TSS
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   361........370.........380......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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