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Job Descriptionexo99____
Confidence99.95%DateMon Feb 25 17:28:45 GMT 2019
Rank72Aligned Residues331
% Identity14%Templatec6bm0B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:pre-mrna 3' end processing protein wdr33; PDBTitle: cryo-em structure of human cpsf-160-wdr33 complex at 3.8 a resolution
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.. .......60....
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Query Sequence  QVPLYVSTSAWRKEVQLRGLLRNHPSIIAHSDILPPATTAKVFSTA. . QLAAHHRENVLA
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Template Sequence  SVIKYLENRIWQRDQRDMRAI. . QPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVK
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   62.......70.........80.. .......90.........100.........110.........
 
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Query Sequence  IGLNPLSTSGACVGLLTME. SAEAKLSGMS. . KMQWLNLPSTEPLSSVEWCEG. . SLLVG
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Template Sequence  CPVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTA
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   120.........130.........140.........150.........160.........170.........
 
   120.........130.........140.........150.........160.........170.. ...
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Query Sequence  TSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTL. . . . VRC
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Template Sequence  DHGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERI
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   180.........190.........200.........210.........220.........230.........
 
   176...180.........190.........200.........210.........220.........230.....
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Query Sequence  VRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPN
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Template Sequence  LRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLN
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   240.........250.........260.........270.........280.........290.........
 
   236...240.........250.........260.........270.........280.........290.....
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Query Sequence  SDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGI
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Template Sequence  GN. WLLTASRDHLCKLFDIRNLK. . . EELQVFRGHKKEATAVAWHPVHEGLFASGGSDGS
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   300. ........310.........320. ........330.........340.........350.....
 
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Query Sequence  ISVFDCRYPSTAVRTI. PSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNL
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Template Sequence  LLFWHVG. VEKEVGGMEMAHEGMIWSLAWHP. LGHILCSGSNDHTSKFWTR
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   356...360.. .......370.........380..... ....390.........400....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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