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Job Descriptionexo99____
Confidence99.77%DateMon Feb 25 17:28:45 GMT 2019
Rank209Aligned Residues321
% Identity13%Templatec1nnoA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nitrite reductase; PDBTitle: conformational changes occurring upon no binding in nitrite reductase2 from pseudomonas aeruginosa
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90......... 100.........110
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Query Sequence  AQLAAHHRENVLAIGLNPLSTSGACVGLLTMESAEAKLSGMSKMQWLN. LPSTEPLSSVE
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Template Sequence  ESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISR
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GGGS
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   126...130.........140.........150.........160.........170.........180.....
 
   111... .....120.........130.... .....140.........150.........160.
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Query Sequence  WCEG. . SLLVGTSRGRIVVADVSPQT. . . . . . VEDSDGELQRRTCLVCSEEQTPVGDIV.
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Template Sequence  MSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY
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TTSSSSSS

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   186...190.........200.........210.........220.........230.........240.....
 
   162.......170 .........180.........190......
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Query Sequence  VPPSKHAVS. . . . . . . . . . . . . . . . . . . . . . . . . TLVRCVRSNAAVCSSSVVAVCDSRAM
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Template Sequence  WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL
Template Known Secondary structure  TTTTT




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   246...250.........260.........270.........280.........290.........300.....
 
   197..200.........210.........220.........230.........240.........250......
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Query Sequence  VWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRT
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Template Sequence  LVNYKDID. . . . . . . . . . NLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD
Template Known Secondary structure 
TTTT..........S


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GGGTTTT
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   306...310... ......320.........330.........340.........350.....
 
   257..260.........270.........280.........290. ........300.. .......
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Query Sequence  KEGSTSKLSLPARRGCMARCADFNTLLPFALATAS. SDGIISVFDCR. . . . . . YPSTAVR
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Template Sequence  RRLSALVDVGKTPHPGRGANFVHPK. YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA
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SSSB

TT
TT.TBSSSS

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   356...360.........370.........380 .........390.........400.........410....
 
   310.........320.........330... ......340.........350......
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Query Sequence  TIPSLHGDIMSLKYLKLHSDIIAT. . . . . . . GGVDGSVVLWNLRSLPTYRVGRA. . . . . .
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Template Sequence  ELQGQGGGSLFIKTHP. KSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWAD
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T.T


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   415....420.........430 .........440.........450.........460.........470...
 
   357..360.........370.........380. ......
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Query Sequence  . . QYKCPVFDLITTPWSVEQHVIGVTC. . . . . . GGELTL
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Template Sequence  LGEGAKRVVQPEYNK. . . RGDEVWFSVWNGKNDSSALVV
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S...SSS

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   474.....480........ .490.........500.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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