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Job Descriptionexo99____
Confidence99.91%DateMon Feb 25 17:28:45 GMT 2019
Rank172Aligned Residues242
% Identity14%Templatec6az1g_
PDB info PDB header:ribosome/antibioticChain: G: PDB Molecule:ribosomal protein s6e; PDBTitle: cryo-em structure of the small subunit of leishmania ribosome bound to2 paromomycin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110..... ....120.........130.... .....140..
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Query Sequence  KMQWLNLPSTEPLSSVEWCEGS. . . . . LLVGTSRGRIVVADVSPQT. . . . . . VEDSDGEL
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Template Sequence  NYEGHLRGHRGWVTSLACPEQAESYIKVVSTSRDGTAIAWKANADRHDYGLPSHRLEGHT
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   2.......10.........20.........30.........40.........50.........60.
 
   143......150.........160.........170......... 180.........
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Query Sequence  QRRTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAVCSSSVVA
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Template Sequence  GFVSCVSLAHATDYALTASWDRSIRMWDLRNGQSQRKFLKHTKDVLAVAFSPDDRLIVSA
Template Known Secondary structure  S

SSSSTTS
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   66...70.........80.........90.........100.........110.........120.....
 
   190.........200......... 210.........220
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Query Sequence  VCDSRAMVWDVKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSVDSSKNS
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Template Sequence  GRDNVVRVWNVAGDCMHEFLRDGHKDWVSSICFSPIVVSGSWDNTIKVWNVNGGKCERTL
Template Known Secondary structure  TTS
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   126...130.........140.........150.........160.........170.........180.....
 
   221........230.........240.........250.........260.........270.........280
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Query Sequence  PNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFN
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Template Sequence  KGHSNYVSTVTVSPDGS. LCASGGKDGVALLWDLSTG. . . . . . EQLFKINVESPINQIAF
Template Known Secondary structure  B

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   191........200....... ..210.........220...... ...230.........240...
 
   281........290.........300.........310.. .......320.........330.......
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Query Sequence  TLLPFALATASSDGIISVFDCRYPSTAVRTIP. . . SLHGDIMSLKYLKLHSDIIATGGVD
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Template Sequence  S. PNRFWMCVATEKSLSVYDLE. SKTVIAELTPDGAKPSECISIAWSA. DGNTLYSGHKD
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   244 .....250.........260.... .....270.........280......... 290.........300
 
   338.340.....
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Query Sequence  GSVVLWNL
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Template Sequence  NLIRVWSI
Template Known Secondary structure  S

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   301.......
 
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No model constructed - rank, confidence too low




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