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Job Descriptionexo99____
Confidence33.83%DateMon Feb 25 17:28:45 GMT 2019
Rank398Aligned Residues116
% Identity9%Templatec4hvtA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:post-proline cleaving enzyme; PDBTitle: structure of a post-proline cleaving enzyme from rickettsia typhi
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240........ .250.........260. ........270........
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Query Sequence  LLFAQWVPNSDSVVLTGSYSGS. . . . LVFTDIRTKEGST. . . . SKLSLPARRGCMARCAD
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Template Sequence  RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPT
Template Known Secondary structure 
SSSTTTT
STTTT
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B
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   132.......140.........150.........160.........170.........180.........190.
 
   279280.........290... ......300....... ..310.........320.......
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Query Sequence  FNTLLPFALATASSD. . . . . . . . . . GIISVFDCRYPSTA. VRTIPSLHGDIMSLKYLKLH
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Template Sequence  WIN. KDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLS
Template Known Secondary structure  .TT



STT
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   192.. .....200.........210.........220.........230.........240.........250
 
   328. 330.........340...
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Query Sequence  SD. . . . . IIATGGVDGSVVLW
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Template Conservation           
           
Template Sequence  DTISSSLIFISANKDFYNYDN
Template Known Secondary structure  TTT
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   251........260.........270.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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