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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank9Aligned Residues279
% Identity13%Templatec6em5m_
PDB info PDB header:ribosomeChain: M: PDB Molecule:60s ribosomal protein l14-a; PDBTitle: state d architectural model (nsa1-tap flag-ytm1) - visualizing the2 assembly pathway of nucleolar pre-60s ribosomes
Resolution4.30 Å
Model Dimensions (Å)X:57.205 Y:69.563 Z:43.718

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.... .....120.........130......
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Query Sequence  LLTMESAEAKLSGMSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE
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Template Sequence  IPELPSPKDLRPFPIRCSTIYAGHKGKVRTLSIDPSGLWLATGSDDGTVRVWEILT. . . .
Template Known Secondary structure  S




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   413......420.........430.........440.........450.........460........
 
   137..140.........150.........160.........170.........180.........190......
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Query Sequence  DSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAM
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Template Sequence  . . . . . . . . . . . . . . . . . GREVYRTTLIDDEENPDYHIECIEWNPDANNGILAVAVGENIH
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   469470.........480.........490.........500.........510.
 
   197..200......... 210.........220.........230.........
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Query Sequence  VWDVKGATQPVHT. . . . . . . . . . . . . . . . . WVPSVDSSKNSPNEQEPLLFAQWVPNSDSV
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Template Sequence  LIVPPIFGYDIENNGKTKIEDGFAQWNKPSQKQLEKDICITISCKKTVKKLSWHRKGD. Y
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   512.......520.........530.........540.........550.........560......... 570
 
   240....... ..250.....
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Query Sequence  VLTGSYSG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SLVFTDIR
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Template Sequence  FVTVQPDSGNTSVLIHQVSKHLTQSPFKKSKGIIMDAKFHPFKPQLFVCSQRYVRIYDLS
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TT
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   609610.........620.........630.........640.........650.........660........
 
   256...260.........270.........280.........290.........300.........310.....
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Query Sequence  TKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLH
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Template Sequence  QQIL. . . . VKKLLPGARWLSKIDIHP. RGDNLIASSFDKRVLWHDLDLASTPYKTLRYHE
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   669670.. .......680.........690 .........700.........710.........720...
 
   316...320.........330.........340...... ...350.........360...
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Query Sequence  GDIMSLKYLKLHSDIIATGGVDGSVVLWNLR. . . . . . . . . . . . SLPTYRVGRAQYKCPVF
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Template Sequence  KAVRSVNFHK. KLPLFSSAADDGTIHVFHATVYDDMMKNPMIVPLKKLTGHKVINSLGVL
Template Known Secondary structure  S

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   724.....730... ......740.........750.........760.........770.........780..
 
   364.....370.........380.......
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Query Sequence  DLITTPWSVEQHVIGVTCGGELTL
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Template Sequence  DAIWHP. . REAWLFSAGADNTARL
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   783..... .790.........800....
 
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