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Job Descriptionexo99____
Confidence99.91%DateMon Feb 25 17:28:45 GMT 2019
Rank161Aligned Residues236
% Identity18%Templatec5yzvC_
PDB info PDB header:protein bindingChain: C: PDB Molecule:probable serine/threonine-protein kinase pkwa; PDBTitle: biophysical and structural characterization of the thermostable wd402 domain of a prokaryotic protein, thermomonospora curvata pkwa
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   99100.........110.... .....120.........130...... ...140.........150.....
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Query Sequence  NLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSEEQT
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Template Sequence  ILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAVAFSPDGA
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   455....460.........470.........480.........490.........500.........510....
 
   156...160.........170......... 180.........190.........200..
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Query Sequence  PVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAVCSSSVVAVCDSRAMVWDVKG
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Template Sequence  LLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVAT
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   515....520.........530.........540.........550.........560.........570....
 
   203...... 210.........220.........230.
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Query Sequence  ATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSVDSSKNSPNEQEPLLFAQ
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Template Sequence  GTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLA
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   575....580.........590.........600.........610.........620.........630....
 
   232.......240.........250.........260.........270.........280.........290.
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Query Sequence  WVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATAS
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Template Sequence  FSPDGS. . MLVHGSDSTVHLWDVASGEA. . . . LHTFEGHTDWVRAVAFSP. DGALLASGS
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   635....640 .........650.........660 .........670........ .680.......
 
   292.......300.........310.........320.........330.........340...
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Query Sequence  SDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLW
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Template Sequence  DDRTIRLWDVA. AQEEHTTLEGHTEPVHSVAFHP. EGTTLASASEDGTIRIW
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   688.690........ .700.........710.........720 .........730.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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