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Job Descriptionexo99____
Confidence99.97%DateMon Feb 25 17:28:45 GMT 2019
Rank41Aligned Residues271
% Identity9%Templatec2w18A_
PDB info PDB header:nuclear proteinChain: A: PDB Molecule:partner and localizer of brca2; PDBTitle: crystal structure of the c-terminal wd40 domain of human2 palb2
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.... .....140.........150.........160
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Query Sequence  LSSVEWCEGSLLVGTSRGRIVVADVSPQT. . . . VEDSDGELQRRTCLVCSEEQTPVGDI.
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Template Sequence  VSAMFWEKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVA
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   872.......880.........890.........900.........910.........920.........930.
 
   161........170.........180.........190.........200.........210 .....
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Query Sequence  . VVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTW. . . . VPSVD
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Template Sequence  LGNLEIREIRALFCEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGK
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   936...940.........950.........960.........970.........980.........990.....
 
   216...220.........230.........240.........250.........260.........270.....
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Query Sequence  SSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMAR
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Template Sequence  ENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL. . . . LKKMHIDDASVC
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   1002.......1010.........1020.........1030.........1040..... ....1050.......
 
   276...280.........290.........300.........310....... ..320.........330..
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Query Sequence  CADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGD. . . IMSLKYLKLHSDIIA
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Template Sequence  HKAYSE. MGLLFIVLSPVFQLIVINPK. TTLSVGVMLYCLPPGQAGRFLEGDV. KDHCAA
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   1061..... ...1070.........1080...... ...1090.........1100.........1110. ......
 
   333......340.........350.........360.........370.........380.......
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Query Sequence  TGGVDGSVVLWNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELTL
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Template Sequence  AILTSGTIAIWDLLLGQCTALLPPVQH. . WSFVKWSG. . TDSHLLAGQKDGNIFV
Template Known Secondary structure  TTS
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   1130.........1140.........1150...... ...1160.... .....1170.........1180
 
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No model constructed - rank, confidence too low




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