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Job Descriptionexo99____
Confidence94.63%DateMon Feb 25 17:28:45 GMT 2019
Rank352Aligned Residues172
% Identity19%Templatec4i0oA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:protein elys; PDBTitle: nucleoporin elys (aa1-494), mus musculus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210.........220.........230. ......
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Query Sequence  VCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQ. . . . WVPNSD
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Template Sequence  GKNGLACLACGPQLEVVNSLTGER. . . . . . . . . LSAYRFSGVNEQPPVVLAVKEFSWHKR
Template Known Secondary structure  SSS
TTTTT

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   41........50.........60.... .....70.........80.........90.
 
   238.240... ......250.........260.........270.........280....
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Query Sequence  SVVLTG. . . SYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLP. . . . . . . . . .
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Template Sequence  TGLLIGLEEADGSVLCLYDLGISRVVKAVVL. . . PGRVTAIEPIINH. GGASASTQHLHP
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SSSTTTT...SS
S
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GGGTTS
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   92.......100.........110.........120.. .......130..... ....140.......
 
   285....290.........300.....
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Query Sequence  . . . . . . FALATASSDGIISVFDCRYPS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SLRWLFGVAAVVTDVGQILLIDLCLDDLSCSQNEVEASDLEVITGIPAEVPHIRERVXRE
Template Known Secondary structure  TSSSTT



TT

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GGG
B
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T
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   148.150.........160.........170.........180.........190.........200.......
 
   306...310.........320.........330.........340..... ....350.........360.
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Query Sequence  . . . TAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNL. RSLPTYRVGRAQYKCP
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Template Sequence  GRHLCFQLVSPLGVAISTLSYIN. RTNQLAVGFSDGYLALWNXKSXKREYYTQLEGGRVP
Template Known Secondary structure  T





SS
T.TTTTTSTTT


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   208.210.........220.........230 .........240.........250.........260......
 
   362.....
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Query Sequence  VFDLIT
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Template Sequence  VHAVAF
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   267..270..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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