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Job Descriptionexo99____
Confidence99.69%DateMon Feb 25 17:28:45 GMT 2019
Rank224Aligned Residues274
% Identity12%Templatec1fwxB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:nitrous oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from p. denitrificans
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   70.........80.........90.........100 .........110..... ....120.....
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Query Sequence  LSTSGACVGLLTMESAEAKLSGMSKMQWLNL. PSTEPLSSVEWCEGS. . . LLVGTSRGRI
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Template Sequence  EKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTV
Template Known Secondary structure  TT
STT
SGGG

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TTSSB
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   232.......240.........250.........260.........270.........280.........290.
 
   126...130.........140.........150... ......160.........170.........180 ...
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Query Sequence  VVADVSPQTVEDSDGELQRRTCLVCSEE. QTPVGDIVVPPSKHAVSTLVRCVRSNA. AVC
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Template Sequence  TVLDVTRFD. AVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE
Template Known Secondary structure  GGG.S


GGGG

B

S

TTSTTTT
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   292.......300 .........310.........320.........330.........340.........350
 
   184.....190.........200.........210.........220.........230.........240...
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Query Sequence  SSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTG
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Template Sequence  DAIRAYAGEKVDPIKDKLD. . . . . . . . . . . . . . VHYQPGHLKTVMGETLDATND. WLVCL
Template Known Secondary structure  TT
S


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SS
TTTTSTT

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   351........360......... 370.........380.........390 .....
 
   244.....250.........260.........270.........280.........290.........300...
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Query Sequence  SYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRY
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Template Sequence  SKFSKDRFLNVGP. . . . . . . . . . . . . . . . . . . . . . LKP. ENDQLIDISGDKMVLVHDGPT
Template Known Secondary structure  S

GGGS



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   396...400........ .410. ........420.........430..
 
   304... ..310.........320.........330.........340.........350........
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Query Sequence  PSTA. . . . . VRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRSLPTYRVGRAQY
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Template Sequence  FAEPHDAIAVHPSILSDIKSVWDRNDP. MWAETRAQAEADGVDIDNWTEEVIRDGNKVRV
Template Known Secondary structure  SS




GGGGTT

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TT
G.GGTT

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TT
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   433......440.........450......... 460.........470.........480.........490.
 
   359360.........370.........380........
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Query Sequence  KCPVFDLITTPWSVEQHVIGVTCGGELTLT
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Template Sequence  YMSSVAPSFSI. . . . . ESFTVKEGDEVTVI
Template Known Secondary structure  TTS
.....STT
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   490.........500 .........510....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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