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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank20Aligned Residues247
% Identity18%Templatec5a1vL_
PDB info PDB header:transport proteinChain: L: PDB Molecule:coatomer subunit beta; PDBTitle: the structure of the copi coat linkage i
Resolution21.00 Å
Model Dimensions (Å)X:60.349 Y:49.030 Z:39.803

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.... .....120.........130. ........140.........150
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Query Sequence  KMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVS. PQTVEDSDGELQRRTCLVC
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Template Sequence  DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF
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   6...10.........20.........30.........40.........50.........60.....
 
   151........160.........170.........180.........190.........200.........210
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Query Sequence  SEEQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTW
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Template Sequence  VARKNWV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VTGADDMQIRVFNYNTL. . . . . . .
Template Known Secondary structure  TTTT.............................TTS
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   66...70.. .......80.........
 
   211........220.........230.........240.........250.........260.........270
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Query Sequence  VPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARR
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Template Sequence  . . . . ERVHMFEAHSDYIRCIAVHPTQP. FILTSSDDMLIKLWDWDKKW. . . SCSQVFEGH
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   90.........100.........110.. .......120.........130.. .......140.
 
   271........280.........290.........300..
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Query Sequence  GCMARCADFNTLLPFALATASSDGIISVFDCR. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  THYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPY
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   142.......150.........160.........170.........180.........190.........200.
 
   303......310.........320.........330.........340.......
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Query Sequence  . . . . . . . . . . . . . . . YPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRS
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Template Sequence  LISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHP. ELPIIITGSEDGTVRIWHSST
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   202.......210.........220.........230......... 240.........250.........260
 
   348.350.........360.........370.........380........
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Query Sequence  LPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELTLT
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Template Sequence  YRLESTLNY. GMERVWCVASLR. . GSNNVALGYDEGSIIVK
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   261........ 270.........280. ........290........
 
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Lawrence Kelley, Michael Sternberg 
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