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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank6Aligned Residues244
% Identity11%Templatec3jroA_
PDB info PDB header:transport protein, structural proteinChain: A: PDB Molecule:fusion protein of protein transport protein sec13 and PDBTitle: nup84-nup145c-sec13 edge element of the npc lattice
Resolution4.00 Å
Model Dimensions (Å)X:57.014 Y:53.926 Z:41.170

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  STEPLSSVEWCEGS. . LLVGTSRGRIVVADVSPQ. . . TVEDSDGELQRRTCLVCSEEQTP
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Template Sequence  HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG
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   8.10.........20.........30.........40.........50.........60.......
 
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Query Sequence  VGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . TILASCSYDGKVLIWKEENGRW. . . . . . . . . SQ
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   68.70.........80......... 90.
 
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Query Sequence  SKNSPNEQEPLLFAQWVPN. . SDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMA
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Template Sequence  IAVHAVHSASVNSVQWAPHEYGP. LLLVASSDGKVSVVEFKENGT. . TSPIIIDAHAIGV
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   92.......100.........110.... .....120.........130..... ....140........
 
   275....280.. .......290.........300..... ....310.........320.......
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Query Sequence  RCADFNTL. . . LPFALATASSDGIISVFDCRYPS. . . TAVRTIPSLHGDIMSLKYLKLH.
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Template Sequence  NSASWAPATTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP. TV
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   149150.........160.........170.........180.........190.........200..... ..
 
   328.330.........340.........350..... ....360.........370.........380.
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Query Sequence  . . SDIIATGGVDGSVVLWNLRSLPTYRVGR. . . . AQYKCPVFDLITTPWSVEQHVIGVTC
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Template Sequence  LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL. . SGNVLALSGG
Template Known Secondary structure  SSSSSS
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   217..220.........230.........240.........250.........260.... .....270....
 
   382.....
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Query Sequence  GGELTL
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Template Sequence  DNKVTL
Template Known Secondary structure  SS

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   275....280
 
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