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Job Description | exo99____ | Confidence | 25.62% | Date | Mon Feb 25 17:28:45 GMT 2019 |
Rank | 410 | Aligned Residues | 92 |
% Identity | 15% | Template | c5w64O_ |
PDB info |
PDB header:transcription | Chain: O: PDB Molecule:rna polymerase i-specific transcription initiation factor |
PDBTitle: rna polymerase i initial transcribing complex state 1
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Resolution | 4.20 Å |
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276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
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. | 320 | . |
Predicted Secondary structure |   |
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Query Sequence |   |
C | A | D | F | N | T | L | L | P | F | A | L | A | T | A | S | S | D | G | I | I | S | V | F | D | C | R | Y | P | S | . |
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M | S | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | F | A | F | N | P | W | D | L | Q | Q | F | A | I | I | D | I | K | G | N | W | S | I | G | R | I | P | K | N | F | N | N | N | N | K | R | K | L | Q | L | I | D | N | L | H | G | T | I | F | D | P | E | E | L | S | S | W | K | R | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . |
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322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | Y | L | K | L | H | S | D | I | I | A | T | G | G | V | D | G | S | V | V | L | W | N | L | R | S | L | P | T | Y | R | V | G | R | A | Q | Y | K | C | P | V | F | D | L | I | T | T | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | W | F | S | H | F | Q | K | I | L | V | F | D | R | S | . |
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K | M | I | E | I | D | F | M | N | N | W | Q | T | E | V | V | Q | A | K | A | W | S | N | I | R | D | Y | K | R | I | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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364 | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | |
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. | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
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publication with acknowledgement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis |
Kelley LA et al. Nature Protocols
10, 845-858 (2015)
[paper]
[Citation
link] |
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