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Job Descriptionexo99____
Confidence99.18%DateMon Feb 25 17:28:45 GMT 2019
Rank261Aligned Residues194
% Identity6%Templatec5l8sD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:amino acyl peptidase; PDBTitle: the crystal structure of a cold-adapted acylaminoacyl peptidase2 reveals a novel quaternary architecture based on the arm-exchange3 mechanism
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180.........190.........200.........210.........220.........230.
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Query Sequence  LVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQ
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Template Sequence  TITNFAVSSDEKRLVFNANLNGKMNLWAMDLPD. . . . . . . . . . TYPYLFAHRDESCNFIK
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   17..20.........30.........40......... 50.........60......
 
   232.......240....... ..250.........260.........270.........280.......
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Query Sequence  WVPNSDSVVLTGSYSG. . . . SLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFAL
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Template Sequence  FDPENRYVLAGFDKDGDENYQIYAIPNEGGL. . . PHPLITGDASEKYYFSHLSA. DGKCV
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   67..70.........80.........90....... ..100.........110....... ..120..
 
   288.290..... ....300.........310.........320.........330.........340..
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Query Sequence  ATASSDGI. . . . . ISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVL
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Template Sequence  YYETSKENPSFLNTRIRNLE. TGEDRLLNVGEVSTTELAAVSE. NEESFVYLRAFANTYI
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   123......130.........140.. .......150.........160.... .....170.........180
 
   343.. ....350.........360.........370.........380...
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Query Sequence  WNL. . RSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGG
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Template Sequence  VGFVKMGEETFNITPDPEKVHVAMEPVFT. . DNETIYFATDYD
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   181........190.........200......... 210.........220.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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