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Job Descriptionexo99____
Confidence99.86%DateMon Feb 25 17:28:45 GMT 2019
Rank194Aligned Residues330
% Identity15%Templatec4ui9I_
PDB info PDB header:cell cycleChain: I: PDB Molecule:anaphase-promoting complex subunit 4; PDBTitle: atomic structure of the human anaphase-promoting complex
Resolution3.60 Å
Model Dimensions (Å)X:72.530 Y:64.954 Z:97.349

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  PNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCM. . . ARCA
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Template Sequence  KQLPQEIIFLVWSPKRD. LIALANTAGEVLLHRLASFHR. . . . VWSFPPNENTGKEVTCL
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B
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SGGG
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Query Sequence  DFNTLLPFALATASSD. GIISVFDCRYPSTAVRTIPSLHGDIMSLKY. . . . . . . . . . . . .
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Template Sequence  AWRP. DGKLLAFALADTKKIVLCDV. EKPESLHSFS. VEAPVSCMHWMEVTVESSVLTSF
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S.SSSSSS

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   72... ....80.........90..... ....100..... ....110.........120........
 
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LKLHSDIIATGGVDGSVVLWN
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Template Sequence  YEDESNLLLPKLPTLPKNYSNTSKIFSEENSDEIIKLLGDV. RLNILVLGGSSGFIELYA
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S

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   129130.........140.........150.........160......... 170.........180.......
 
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Query Sequence  LRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGV. . TCGGELTLTGLAQEAMATLAVPV
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Template Sequence  YGMFKIARVT. . GIAGTCLALCLSSDLKSLSVVTEVSTNGASEVS. . . . . . . YFQLETNL
Template Known Secondary structure  TTT..


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TTSSB

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Query Sequence  TERLSKPSGRRQEDKTAANEATELMEREKYGVGLLYSRRLREAYEVIVDCATKRFARK. .
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Template Sequence  LYSFLPEVTRMARKFTHISALLQYINLS. . . . . . . . LTCMCEAWEEILMQMDSRLTKFVQ
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   241........250.........260........ .270.........280.........290..
 
   461........470.........480.........490....... ..500.........510..
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Query Sequence  . . . . EITMAMRLAGLLDVKMLPKFDYRAKVESFEAEEKCKR. . . . ELGVAALSQSQVIVA
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Template Sequence  EKNTTTSVQDEFM. HLLLWGKASAELQTLLMNQLTVKGLKKLGQSIESSYSSIQKLVISH
Template Known Secondary structure  S
SSS
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   293......300..... ....310.........320.........330.........340.........350.
 
   513......520.........530.........540.........550.........560.........570..
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Query Sequence  FEDALVRSSQWLFPSLLSENIRDLQKPAKQDVTKLEALQLNLLLHNNIASGCIGSVVGGL
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Template Sequence  LQSGSESLLYHLSELKGMASWKQKYEPLGLDAAGIEEAITAVGSFILKANELLQVIDSSM
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TTTT

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   352.......360.........370.........380.........390.........400.........410.
 
   573....
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Query Sequence  QYFIA
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Template Sequence  KNFKA
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