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Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank89Aligned Residues295
% Identity11%Templatec5a31R_
PDB info PDB header:cell cycleChain: R: PDB Molecule:the anaphase-promoting complex chain r; PDBTitle: structure of the human apc-cdh1-hsl1-ubch10 complex.
Resolution4.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110...
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Query Sequence  LAAHHRENVLAIGLNPLSTSGACVGLLTMESAEAKLSGMSKMQWLNLPSTEPLSSVEWCE
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Template Sequence  RVLDAPSLADDFYYSLIDWSSTDVLAVALGKSIFLTDNNTGDVVHLCDTENEYTSLSWIG
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   177..180.........190.........200.........210.........220.........230......
 
   114 .....120.........130...... ...140.........150.........160.........170
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Query Sequence  G. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVS
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Template Sequence  AGSHLAVGQANGLVEIYDVMKRKCIRTLSGHIDRVACLSWNNHVLTSGSRDHRILHRDVR
Template Known Secondary structure  TSSTTS
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   237..240.........250.........260.........270.........280.........290......
 
   171...... ..180.........190.........200.........210.........220.........
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Query Sequence  TLVRCVR. SNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLF
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Template Sequence  MPDPFFETIESHTQEVCGLKWNVADNKLASGGNDNVVHVYEGTSKSPILTFDEHKAAVKA
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   297..300.........310.........320.........330.........340.........350......
 
   230........ .240.........250.........260.........270.........280.....
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Query Sequence  AQWVPNSDS. . VVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPF. .
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Template Sequence  MAWSPHKRGVLATGGGTADRRLKIWNVNTSI. . . . . KMSDIDSGSQICNMVWSK. NTNEL
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   357..360.........370.........380....... ..390.........400..... ....410
 
   286...290.........300.........310.........320.........330.........340.....
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Query Sequence  ALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNL
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Template Sequence  VTSHGYSKYNLTLWDCN. SMDPIAILKGHSFRVLHLTLSN. DGTTVVSGAGDETLRYWKL
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   411........420....... ..430.........440......... 450.........460........
 
   346...350......
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Query Sequence  RSLPTYRVGRA
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Template Sequence  FDVSVLNLFTR
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   469470.........
 
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No model constructed - rank, confidence too low




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