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Job Descriptionexo99____
Confidence99.97%DateMon Feb 25 17:28:45 GMT 2019
Rank34Aligned Residues317
% Identity12%Templatec4xfvA_
PDB info PDB header:translationChain: A: PDB Molecule:elongator complex protein 2; PDBTitle: crystal structure of elp2
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  NESIIQVPLYVSTSAWRKEVQLRGLLRNHPSIIAHSDILPPATTAKVFSTAQLAAHHREN
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Template Sequence  MDFFLTNGKTGSWRMWAT. . . . . . . . . . . CDQRLGISGATKDVTDIAWSPSGEYLLATSL
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TTS


B
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B

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T
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   352.......360......... 370.........380.........390.........400
 
   62.......70.........80.........90.........100.........110.... .....120
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Query Sequence  VLAIGLNPLSTSGACVGLLTMESAEAKLSGMSKMQWLNLPSTEPLSSVEWCEG. SLLVGT
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Template Conservation 
  
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Template Sequence  DQTTRLFAPWIYDASGRKREIATWHE. . . . . . . . FSRPQIHGYDMICVETVTDTRFVSGG
Template Known Secondary structure  TS



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   406...410.........420.........430. ........440.........450.......
 
   121........130.. .......140.........
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Query Sequence  SRGRIVVADVSP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QTVEDSDGELQRRTCLV
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Template Conservation   
  
                                              
   
  
 
Template Sequence  DEKILRSFDLPKGVAGMLQKFVGIQFEEECPPMEDQLQRHLLWPEVEKLYGHGFEITCLD
Template Known Secondary structure  SSSS

T










SSS






SS
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   458.460.........470.........480.........490.........500.........510.......
 
   150.........160.........170......... 180.........190
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Query Sequence  CSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . . . . . . . AAVCSSSVVAV
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Template Conservation   
     
                                                    
Template Sequence  ISPDQKLIASACRSNNVQNAVIRIFSTENWLEIKPALPFHSLTITRLKFSKDGKFLLSVC
Template Known Secondary structure 
TTSS

SSTTTS
TTT

B
S

B


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   566...570.........580.........590.........600.........610.........620.....
 
   191........200.........210.........220.........230....... ..240.........
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Query Sequence  CDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSD. SVVLTGSYSGSL
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Template Sequence  RDRKWALWERNMEDNTFE. . . . . . LRFKNEKPHTRIIWDADWAPLEFGNVFVTASRDKTV
Template Known Secondary structure  SSS

TTT

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   626...630.........640... ......650.........660.........670.........
 
   250.........260.........270.........280. ........290.........300......
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Query Sequence  VFTDIRTKEGSTSKLSLPARRGCMARCADFNT. . . LLPFALATASSDGIISVFDCRYPST
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Template Sequence  KVWRHQKEPADDYVLEASIKHTKAVTAISIHDSMIREKILISVGLENGEIYLYSYT. LGK
Template Known Secondary structure 
SSSS
SS

SS
SSSSSS

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   680.........690.........700.........710.........720.........730..... ...
 
   307 ..310.........320......... 330.........340.....
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Query Sequence  A. . . . . VRTIPSLHGDIMSLKYLKLHSD. . . . IIATGGVDGSVVLWNL
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Template Sequence  FELITQLNEDITPADKITRLRWSH. LKRNGKLFLGVGSSDLSTRIYSL
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TTTS
SS
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   739740.........750.........760.. .......770.........780.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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