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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank130Aligned Residues214
% Identity14%Templatec5gmkq_
PDB info PDB header:rna binding protein/rnaChain: Q: PDB Molecule:pre-mrna-splicing factor slt11; PDBTitle: cryo-em structure of the catalytic step i spliceosome (c complex) at2 3.4 angstrom resolution
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.... .....140.........150.........160.........
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Query Sequence  LLVGTSRGRIVVADVSPQT. . . . . . VEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAV
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Template Sequence  CMCRCEDGALHFTQLKTITTITTPNPRTGGEHPARLLLLYPSKTNKVLREMYGHNEVN. .
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   211........220.........230.........240.........250.........260........
 
   170.........180.........190.........200.........210.........220.........
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Query Sequence  STLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLF
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Template Sequence  . . . . . . . . . . . . . TEYFIWADNRGTIGFYIVH. . . . . . . . . . . . . . . . . . SAKSDVEYSS
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   299300.........310....... ..320.......
 
   230.........240.........250.........260.........270.........280.........
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Query Sequence  AQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALAT
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Template Sequence  GVLHKDSL. LLALYSPDGILDVYNLSSPDQASSR. . . . . . FPAKIKEVKFAD. NGYWMVV
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   336...340... ......350.........360........ .370.........380 .......
 
   290.........300.........310.........320.........330.........340.........
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Query Sequence  ASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRSLP
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Template Sequence  ECQT. . VVCFDLR. . . KDVGTLAYPTYKTGTVTYDI. DM. . IAYSNESNSLTIYKFDKKK
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   392... ....400.. .......410.........420.. .. .....430.........440...
 
   350.........360.........370.........380.
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Query Sequence  TYRVGRAQYKCPVFDLITTPWSVEQHVIGVTC
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Template Sequence  NW. . . TKDEESALCLQSDTADFTDMDVVCGDA
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   456. ..460.........470.........480....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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