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Job Descriptionexo99____
Confidence99.93%DateMon Feb 25 17:28:45 GMT 2019
Rank119Aligned Residues246
% Identity14%Templatec4j8bA_
PDB info PDB header:protein transportChain: A: PDB Molecule:coatomer alpha subunit; PDBTitle: crystal structure of alpha-cop/emp47p complex
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.... .....120.........130...... ...140.........150
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Query Sequence  KMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVE. DSDGELQRRTCLVC
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Template Sequence  AMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAF
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   2.......10.........20.........30.........40.........50.........60.
 
   151........160.........170......... 180.........190.......
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Query Sequence  SEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . . . . . . AAVCSSSVVAVCDSRAMV
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Template Sequence  HPTQPIFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRI
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   62.......70.........80.........90.........100.........110.........120.
 
   198.200......... 210.........220..
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Query Sequence  WDVKGATQPVHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WVPSVDSSKNSPN
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Template Sequence  WNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRADAIVKFVLEG
Template Known Secondary structure  TTTT


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   122.......130.........140.........150.........160.........170.........180.
 
   223......230.........240.........250.........260.........270.........280..
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Query Sequence  EQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTL
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Template Sequence  HDRGVNWCAFHPTLP. LILSAGDDRLVKLWRMTASKA. . WEVDTCRGHFNNVSCCLFHP.
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   211........220..... ....230.........240...... ...250.........260......
 
   283......290.........300.........310.........320.........330.........340..
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Query Sequence  LPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVL
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Template Sequence  HQELILSASEDKTIRVWDLN. RRTAVQTFRRANDRFWFITVHP. KLNLFAAAH. DSGVMV
Template Known Secondary structure  SSSTTSTT.T


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   267..270.........280...... ...290.........300........ .310....... ..320...
 
   343...
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Query Sequence  WNLR
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Template Sequence  FKLE
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   324...
 
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No model constructed - rank, confidence too low




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