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Job Descriptionexo99____
Confidence99.54%DateMon Feb 25 17:28:45 GMT 2019
Rank239Aligned Residues228
% Identity10%Templatec2g8sB_
PDB info PDB header:sugar binding proteinChain: B: PDB Molecule:glucose/sorbosone dehydrogenases; PDBTitle: crystal structure of the soluble aldose sugar dehydrogenase2 (asd) from escherichia coli in the apo-form
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.... .....120.........130.. .......140.........150.......
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Query Sequence  SSVEWCEG. . SLLVGTSRGRIVVADVSP. . . . . . . QTVEDSDGELQRRTCLVCSEEQTPV
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Template Sequence  WALAFLPDNHGXLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQS
Template Known Secondary structure 
STT

TTTTTT



BS





STT
S
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   18.20.........30.........40.........50.........60.........70.......
 
   158.160.........170.........180.
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Query Sequence  GDIVVPPSKHAVSTLVRCVRSNAA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                             
Template Sequence  RRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQXPKLSTGNHFGGRLVFDGK
Template Known Secondary structure 

SSS

TTSSB
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SS
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   78.80.........90.........100.........110.........120.........130.......
 
   182....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VCSSS
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Template Conservation         
                                                    
Template Sequence  GYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQ
Template Known Secondary structure  S

TT
GGGGG
TTS
TTTTS


TT
TTTTSTT

TT

S
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   138.140.........150.........160.........170.........180.........190.......
 
   187..190.........200. ........210.. .......220.........230.........240....
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Query Sequence  VVAVCDSRAMVWDVK. GATQPVHTWVP. SVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGS
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Template Conservation            
     
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Template Sequence  GXAXNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK. GEIVAG
Template Known Secondary structure  TTTT
SBS



TT
B

TTTB
SSB
TTSS

TT

.BSS
TT
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   198.200.........210.........220.........230.........240.........250 ......
 
   245....250.........260.........270.........280.........290.........300....
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Query Sequence  YSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYP
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Template Sequence  TEQPVFYWKDSPAV. . . . . . . . . SGXAFYNSDKFPQW. QQKLFIGALKDKDVIVXSVNGD
Template Known Secondary structure  S


SSS


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SSSGGG.TTTTTTTT
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   257..260.........270 .........280.... .....290.........300......
 
   305 ....310.........320......... 330.........340......
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Query Sequence  S. . TAVRTIPSLHGDIMSLKYLKLHSD. IIATGGVDGSVVLWNLR
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Template Sequence  KVTEDGRILTDRGQRIRDVRTGP. DGYLYVLTDESSGELLKVSPR
Template Known Secondary structure  SGGG



T.TS

STT
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   307..310.........320......... 330.........340.........350
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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