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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank29Aligned Residues290
% Identity19%Templatec1nr0A_
PDB info PDB header:structural proteinChain: A: PDB Molecule:actin interacting protein 1; PDBTitle: two seven-bladed beta-propeller domains revealed by the2 structure of a c. elegans homologue of yeast actin3 interacting protein 1 (aip1).
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90....... ..100.........110
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Query Sequence  QLAAHHRENVLAIGLNPLSTSGACVGLLTMESAEAKLSGMSKMQW. . LNLPSTEPLSSVE
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Template Sequence  TALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAK
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   7..10.........20.........30.........40.........50.........60......
 
   111... .....120.........130... ......140.........150.........160.. .
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Query Sequence  WCEG. . SLLVGTSRGRIVVADVSPQ. . . TVEDSDGELQRRTCLVCSEEQTPVGDIVV. . P
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Template Sequence  TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE
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TTSSTTSSSSTT


SSS

TTS


SS
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   67..70.........80.........90.........100.........110.........120......
 
   164.....170..... ....180.........190.........200...
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Query Sequence  PSKHAVSTLVRC. . . . . . . . . . . . . . VRSNAAVCSSSVVAVCDSRAMVWDVKGA. . . . . .
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Template Sequence  RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF
Template Known Secondary structure 
STTT

B
B




SS

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   127..130.........140.........150.........160.........170.........180......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation              
                                      
        
Template Sequence  GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT
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SS

TTSSTTS
TTT


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   187..190.........200.........210.........220.........230.........240......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation   
                                                          
Template Sequence  WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI
Template Known Secondary structure 
TTSSTTSTTTT

SSGGG

SS
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   247..250.........260.........270.........280.........290.........300......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH
Template Known Secondary structure  TTTT


SS

TTSSTTS
TTT


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   307..310.........320.........330.........340.........350.........360......
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                              
Template Sequence  ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIA
Template Known Secondary structure  SS

TTS
TTT
SSSSSS
TTS


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   367..370.........380.........390.........400.........410.........420......
 
   204.....210.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TQPVHTWVPSVDSSKN
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Template Conservation                                                              
Template Sequence  VAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVK
Template Known Secondary structure  SSTT
SS

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   427..430.........440.........450.........460.........470.........480......
 
   220.........230.........240.........250.........260.........270.........
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Query Sequence  SPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADF
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Template Sequence  TIVHPAEITSVAFSNNGA. FLVATDQSRKVIPYSVANNFELAH. TNSWTFHTAKVACVSW
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SS

TTSS.TTS
GGGTTS
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   487..490.........500.... .....510.........520........ .530.........540....
 
   280.........290.........300..... ....310.........320.........330........
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Query Sequence  NTLLPFALATASSDGIISVFDCRYPS. TAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDG
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Template Sequence  SP. DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL. NETTIVSAGQDS
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T.TSSTTS
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   545. ...550.........560.........570.........580.........590 .........600..
 
   339340......
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Query Sequence  SVVLWNLR
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Template Conservation   
 



 
Template Sequence  NIKFWNVP
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   603......610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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