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Job Descriptionexo99____
Confidence99.34%DateMon Feb 25 17:28:45 GMT 2019
Rank254Aligned Residues226
% Identity15%Templatec1xfdD_
PDB info PDB header:membrane proteinChain: D: PDB Molecule:dipeptidyl aminopeptidase-like protein 6; PDBTitle: structure of a human a-type potassium channel accelerating factor2 dppx, a member of the dipeptidyl aminopeptidase family
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111.... ....120.........130........ .140.........150.........160.....
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Query Sequence  WCEGS. LLVGTSRGRIVVADVSPQTVEDS. . . . DGELQRRTCLVCSEEQTPVGDIVVPPS
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Template Sequence  WISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEP
Template Known Secondary structure  BSSSS
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   150.........160.........170.........180.........190.........200.........
 
   166...170.........180.........190.........200.........210.........220.....
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Query Sequence  KHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQE
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Template Sequence  IYQHS. . . . . . . . . . . . . . . . . . . . YTGYYVLSKIPHGDP. . . . . . . . . QSLDPPEVSNA
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SSS
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   210.... .....220......... 230.........240
 
   226...230.........240.........250.........260.........270......
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Query Sequence  PLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARC. . . . . . . . .
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Template Sequence  KLQYAGWGPKGQ. QLIFIF. ENNIYYCAHVGKQ. . . AIRVVSTGKEGVIYNGLSDWLYEE
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BSB

B
SSTT.
.TTSSSSS
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   241........250.. ...... .260.........270. ........280.........290.....
 
   277..280.........290....
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Query Sequence  . . . . . . . . ADFNTLLPFALATASSDG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  EILKTHIAHWWSP. DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI
Template Known Secondary structure  TTSSSS
T.TSS
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   296...300........ .310.........320.........330.........340.........350....
 
   295....300.........310.. .......320.........330... ......340.....
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Query Sequence  IISVFDCRYPSTAVRTIP. . . . . SLHGDIMSLKYLKLHSDIIAT. . . . GGVDGSVVLWNL
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Template Sequence  SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT. STKVAVTWLNRAQNVSILTLCDA
Template Known Secondary structure  SSSS








GGGSSSS.SSTTS
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   355....360.........370.........380.........390 .........400.........410...
 
   346...350.........360.........370..
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Query Sequence  RSLPTYRVGRAQYKCPVFDLITTPWSV
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Template Sequence  TTGVCTKKHEDESEAWLHRQNEEPVFS
Template Known Secondary structure  TT


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   414.....420.........430.........440
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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