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Job Descriptionexo99____
Confidence100.00%DateMon Feb 25 17:28:45 GMT 2019
Rank7Aligned Residues274
% Identity19%Templatec2ymuA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:wd-40 repeat protein; PDBTitle: structure of a highly repetitive propeller structure
Resolution1.79 Å
Model Dimensions (Å)X:57.347 Y:92.616 Z:34.204

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   61........70.........80... ......90.........100.........110.... ..
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Query Sequence  NVLAIGLNPLSTSGACVGLLTME. . SAEAKLSGMSKMQWLNLPSTEPLSSVEWCEG. . SL
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Template Sequence  EAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTI
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   13......20.........30.........40.........50.........60.........70..
 
   117..120.........130.........140.........150.........160.........170......
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Query Sequence  LVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLVRCV
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Template Conservation   
   
  
 


               
  
  
 
   
     
             
Template Sequence  ASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLL
Template Known Secondary structure  TTS
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   73......80.........90.........100.........110.........120.........130..
 
   177.. 180.........190.........200...
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Query Sequence  RSN. . . . . . . . . . . . AAVCSSSVVAVCDSRAMVWDVKGA. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG
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   133......140.........150.........160.........170.........180.........190..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG
Template Known Secondary structure  S
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   193......200.........210.........220.........230.........240.........250..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFS
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   253......260.........270.........280.........290.........300.........310..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  PDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN
Template Known Secondary structure  TTSSTTS
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   313......320.........330.........340.........350.........360.........370..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ............................................................
Template Conservation                                                              
Template Sequence  RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGV
Template Known Secondary structure  TT



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   373......380.........390.........400.........410.........420.........430..
 
   204.....210.........220.........230.........240.........
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Query Sequence  . . . . . . . . . . . . . . TQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSL
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Template Conservation                                   
   
  
  
 
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Template Sequence  AFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQ. TIASASDDKTV
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   433......440.........450.........460.........470.........480 .........490.
 
   250.........260.........270.........280.........290.........300.........
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Query Sequence  VFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVR
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Template Sequence  KLWNRNG. . . . . QLLQTLTGHSSSVRGVAFSP. DGQTIASASDDKTVKLWNR. . NGQLLQ
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   492...... .500.........510........ .520.........530....... ..540...
 
   310.........320.........330.........340....
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Query Sequence  TIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVLWN
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Template Sequence  TLTGHSSSVWGVAFSP. DGQTIASASSDKTVKLWN
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   544.....550......... 560.........570.......
 
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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