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Job Descriptionexo99____
Confidence99.79%DateMon Feb 25 17:28:45 GMT 2019
Rank206Aligned Residues346
% Identity9%Templatec1qniE_
PDB info PDB header:oxidoreductaseChain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50......... 60.........70......... 80.........90
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Query Sequence  ILPPATTAKVFSTAQLAAHHR. . . . . . ENVLAIGLNPLSTSGACVGL. . LTMESAEAKLS
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Template Sequence  FNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKANTRVARI
Template Known Secondary structure  SS

TTT
TTTS
SSS

S


B


TTTTTT
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   4950.........60.........70.........80.........90.........100........
 
   91..... ...100.........110.... .....120.. ....
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Query Sequence  GMSKMQ. . . WLNLPSTEPLSSVEWCEG. . . . SLLVGTSR. . . . . . . . . . . . . . . . . GRIV
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Template Sequence  RLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFT
Template Known Secondary structure  TTTT
TT




SSB


S
SS
SSS


GGG
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   109110.........120.........130.........140.........150.........160........
 
   127..130.........140.........150.........160.........170
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Query Sequence  VADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVS. . . . . . . . . . . . . . . .
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Template Sequence  AIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV
Template Known Secondary structure  TTT

SS




SSSSS
TT

SST
SS
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   169170.........180.........190.........200.........210.........220........
 
   171........180.........190..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TLVRCVRSNAAVCSSSVVAVCD
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Template Sequence  ERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLS
Template Known Secondary structure  TT

B

TT




SSS
SSSS



TTS

TTS
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   229230.........240.........250.........260.........270.........280........
 
   193......200.........210.........220.........230.........240.........250..
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Query Sequence  SRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFT
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Template Sequence  PTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRG. NAYTTLFIDSQVCKW
Template Known Secondary structure  SBGGGTTTSS
GGGG

B

S

SSS.TTTT
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   289290.........300.........310.........320.........330.. .......340.......
 
   253... ...260.........270.........280.........290 ........
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Query Sequence  DIRT. . . . . . . . . . . KEGSTSKLSLPARRGCMARCADFNTLLPFALATA. . . SSDGIISV
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Template Sequence  NIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDA. DGKWLVVLSKFSKDRFLPV
Template Known Secondary structure  T





SS
TTTTSTT
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S

TTSS


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   348.350.........360.........370.........380....... ..390.........400......
 
   299300.........310... ......320.........330.........340.......
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Query Sequence  FDCRYPSTAVRTIPS. . . LHGDIMSLKYLKLHSDIIATGGVDGSVVLWNLRS. . . . . . . .
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Template Sequence  GPLHPENDQLIDISGEEMKLVHDGPTYAEP. HDCILVRRDQIKTKKIYERNDPYFASCRA
Template Known Secondary structure  SSS


SSSS
SS

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GGG



SS

TT
GGG
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   407..410.........420.........430...... ...440.........450.........460.....
 
   348.350.........360.........370.........380........
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Query Sequence  . . . . . . . . . LPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELTLT
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Template Sequence  QAEKDGVTLESDNKVIRDGNKVRVYMTSVAPQYGMT. DFKVKEGDEVTVY
Template Known Secondary structure  T

TTT


TTTTS
S.TT
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   466...470.........480.........490.........500. ........510....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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