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Job Descriptionexo99____
Confidence21.09%DateMon Feb 25 17:28:45 GMT 2019
Rank418Aligned Residues166
% Identity14%Templatec4yd8A_
PDB info PDB header:protein transportChain: A: PDB Molecule:protein pthb1; PDBTitle: bardet-biedl syndrome 9 protein (aa1-407), homo sapiens
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   173......180.........190.........200.........210.........220.........230..
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Query Sequence  VRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFAQW
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Template Sequence  LANVDNSGNGQDKIIVGSFXGYLRIFSPHPAKTGDGAQAEDLLLEVDLRDPVLQVEVGKF
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   27..30.........40.........50.........60.........70.........80......
 
   233......240.........250...... ...260.........270.........280..... .
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Query Sequence  VPNSDSVVLTGSYSGSLVFTDIRT. . KEGSTSKLSLPARRGCMARCADFNTLLPF. . . . A
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Template Sequence  VSGTEXLHLAVLHSRKLCVYSVSGTLGNQCQXKLXYEHNLQRTACNXTYGSFGGVKGRDL
Template Known Secondary structure  STT




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   87..90.........100.........110.........120.........130.........140......
 
   287..290.........300.........310.........320.........330.........340.
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Query Sequence  LATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVV
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Template Sequence  ICIQSXDGXLXVFEQ. . ESYAFGRFLPGFLLPGPLAYSS. RTDSFLTVSSCQQVE
Template Known Secondary structure  TTST..T
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   152.......160...... ...170.........180........ .190.........200...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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