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Job Descriptionexo99____
Confidence99.91%DateMon Feb 25 17:28:45 GMT 2019
Rank160Aligned Residues226
% Identity9%Templatec3jb9U_
PDB info PDB header:rna binding protein/rnaChain: U: PDB Molecule:pre-mrna-processing factor 19; PDBTitle: cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.... .....120.........130.........140........
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Query Sequence  GMSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCL
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Template Sequence  HKDELLCLDIQSEGSALACCWLTSSKIAVATADAISIFEFPVSSSGLQSVGEIDEKVNFL
Template Known Secondary structure  TTTT





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   229230.........240.........250.........260.........270.........280........
 
   149150.........160.........170......... 180.........190.........200
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Query Sequence  VCSEEQTPVGDIVVPPSKHAVSTLVRCVRSN. . . . . . . . AAVCSSSVVAVCDSRAMVWDV
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Template Sequence  QAHPSGEYLLAASNEKCYIFSKSQVYNITVAQHITSLAVHPDGNLFVAGLENGELRFFET
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   302.......310.........320.........330.........340.........350.........360.
 
   201........210.........220.........230.........240.........250.........260
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Query Sequence  KGATQPVHTWVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGS
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Template Sequence  SSG. . . . . . . . . . . NELTKFGPHSSPVKTLQFGENGY. . WLVVTTNSDIFIWDLRKSELV
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   363.. ....370.........380........ .390.........400.........
 
   261........270.........280.........290.........300.........310.........320
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Query Sequence  TSKLSLPARRGCMARCADFNTLLPFALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMS
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Template Sequence  QKI. . . . . PLQTKVAAVSLDI. TQLLVSSDGETLYVHIYVKSR. . . . . CMSQTHVSSISN
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   412.. .....420....... ..430.........440........ .450.........460
 
   321........330.........340.
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Query Sequence  LKYLKLHSDIIATGGVDGSVV
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Template Sequence  LVWLN. ELHQLLFSTSNGAIL
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   466...470 .........480.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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