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Job Descriptionexo99____
Confidence99.94%DateMon Feb 25 17:28:45 GMT 2019
Rank96Aligned Residues249
% Identity15%Templatec5gvaA_
PDB info PDB header:replicationChain: A: PDB Molecule:wd repeat and hmg-box dna-binding protein 1; PDBTitle: wd40 domain of human and-1
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   92.......100.........110.... .....120.........130.........140.........
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Query Sequence  MSKMQWLNLPSTEPLSSVEWCEG. . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLV
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Template Sequence  PATRKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFINVGEKAYSCA
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   2.......10.........20.........30.........40.........50.........60.
 
   150.........160.........170.........180.........190.........200.........
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Query Sequence  CSEEQTPVGDIVVPPSKHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHT
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Template Sequence  LKSGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIV
Template Known Secondary structure  TTTTTTTT


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   62.......70.........80.........90.........100.........110.........120.
 
   210.........220.........230.........240.........250.........260......
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Query Sequence  WVPSVDSSKNSPNEQEPLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSL. . .
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Template Sequence  DVMDSSQQKTFRGHDAPVLSLSFDPKDI. FLASASCDGSVRVWQISDQTCAISWPLLQKC
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   122.......130.........140......... 150.........160.........170.........180
 
   267..270.........280.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PARRGCMARCADFNT
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Template Sequence  NDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSP
Template Known Secondary structure  SSGGG
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   181........190.........200.........210.........220.........230.........240
 
   282.......290.........300.........310...... ...320.........330.........340
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Query Sequence  LLPFALATASSDGIISVFDCRYPSTAVRTIPSLHG. DIMSLKYLKLHSDIIATGGVDGSV
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Template Sequence  . CGQYLAAGSINGLIIVWNVE. TKDCMERVKHEKGYAICGLAWHP. TCGRISYTDAEGNL
Template Known Secondary structure  .TSSTTS
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   241........250.........260 .........270.........280... ......290.......
 
   341...
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Query Sequence  VLWN
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Template Sequence  GLLE
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   298.300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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