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Job Descriptionexo99____
Confidence98.62%DateMon Feb 25 17:28:45 GMT 2019
Rank287Aligned Residues215
% Identity7%Templatec6damA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:lanthanide-dependent methanol dehydrogenase xoxf; PDBTitle: crystal structure of lanthanide-dependent methanol dehydrogenase xoxf2 from methylomicrobium buryatense 5g
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120......... 130.........140.........150.........160.........170...
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Query Sequence  SLLVGTSRGRIVVAD. VSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPSKHAVSTLV
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Template Sequence  TAVHFDRNGFGYTLDRVTGELLVAEKFDKAVNWASHVDMKSGRPQVVSQYSTEYNGEDVN
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TTSTTT

SSTT

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GGG

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   348.350.........360.........370.........380.........390.........400.......
 
   174.....180...... ...190.........200.........210.........220.........230
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Query Sequence  RCVRSNAAVCSSS. . . VVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQEPLLFA
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Template Sequence  TEGVCPAALGSKNQQPVSYSPQTGYFYISGNHVCMDYEPFEVEYTAGQPYVGATLSMFPA
Template Known Secondary structure  SS
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   408.410.........420.........430.........440.........450.........460.......
 
   231........240.........250.........260.........270.........280.........290
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Query Sequence  QWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPFALATA
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Template Sequence  GKDVITG. KEDGSNNLGQFTAWDATTGK. . . . . IIWSNKEQFSVWSGSLAT. AGGVVFYG
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B
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   468.470.... .....480.........490.... .....500.........510.. .......520
 
   291........300.........310.. .......320......... 330........
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Query Sequence  SSDGIISVFDCRYPSTAVRTIP. SLHGDIMSLKYLKLHSD. IIATGGVDG
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Template Sequence  TLEGYLKAVDAK. TGKELYRFKTPSGIIGNVNTWEY. EGKQYVGVLSGVG
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TT
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SB
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   521........530.. .......540.........550..... ....560........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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