Return to main results Retrieve Phyre Job Id

Job Descriptionexo99____
Confidence99.91%DateMon Feb 25 17:28:45 GMT 2019
Rank159Aligned Residues307
% Identity7%Templatec5y2zD_
PDB info PDB header:cell adhesionChain: D: PDB Molecule:leucine-rich glioma-inactivated protein 1; PDBTitle: crystal structure of human lgi1 eptp-adam22 complex
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80...... ...90.........100 ........
Predicted Secondary structure 

























...








...




Query SS confidence 































. . .













. . .







Query Sequence  AAHHRENVLAIGLNPLSTSGACVGLLTMESAE. . . AKLSGMSKMQWLNL. . . PSTEPLSS
Query Conservation 

  


  

 
  

 

  
 


 



...  



 
 




...



 


Alig confidence 































...













...







Template Conservation     
 
   
  
    
  
    
    
    
  

                 
  
Template Sequence  AKSQDLPYQSLSIDTFSYLNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVC
Template Known Secondary structure  SS

S
TT
TTT
TTTT
TT
Template Predicted Secondary structure 























Template SS confidence 



























































   227..230.........240.........250.........260.........270.........280......
 
   109110.... .....120.........130.........140.........150.........160.....
Predicted Secondary structure 


...































Query SS confidence 





. . .


















































Query Sequence  VEWCEG. . . SLLVGTSRGRIVVADVSPQTVEDSDGELQRRTCLVCSEEQTPVGDIVVPPS
Query Conservation 





... 




 










 

  
 
 
    


 
 

  
 


  

Alig confidence 





...













...................

















Template Conservation            
  
       
 ...................                  
Template Sequence  KPIVIETQLYVIVAQLFGGSHIY. . . . . . . . . . . . . . . . . . . KRDSFANKFIKIQDIEIL
Template Known Secondary structure  TTSSS

...................TTTT

TT
Template Predicted Secondary structure 







...................





Template SS confidence 



























































   287..290.........300......... 310.........320.......
 
   166...170.........180.........190.........200.........210.........220.....
Predicted Secondary structure 












































Query SS confidence 



























































Query Sequence  KHAVSTLVRCVRSNAAVCSSSVVAVCDSRAMVWDVKGATQPVHTWVPSVDSSKNSPNEQE
Query Conservation   
  



 

  
   









 










 

  
  
   
 

 


 
Alig confidence 



























































Template Conservation            
   
       
   
    
                            
Template Sequence  KIRKPNDIETFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEI
Template Known Secondary structure  TSSSTT
SSSS

SS
STT

Template Predicted Secondary structure 



























Template SS confidence 



























































   328.330.........340.........350.........360.........370.........380.......
 
   226...230.........240.........250.........260.........270.........280.....
Predicted Secondary structure 



































Query SS confidence 



























































Query Sequence  PLLFAQWVPNSDSVVLTGSYSGSLVFTDIRTKEGSTSKLSLPARRGCMARCADFNTLLPF
Query Conservation   
 















 












  



 

 

   
 





 

 
Alig confidence 











.




















..



















.


Template Conservation   
          .   
   
  
 


      ..     
           
  .   
Template Sequence  VRTPQTLRTPHL. ILSSSSQRPVIYQWNKATQLF. . TNQTDIPNMEDVYAVKHFSV. KGD
Template Known Secondary structure 

TT
SS
.TTS

TTTT..
TT

S

.TT
Template Predicted Secondary structure 






.









..





.


Template SS confidence 



























































   388.390......... 400.........410.........420 .........430.........440 ...
 
   286...290.........300.........310.........320.........330.........340..
Predicted Secondary structure  ...
























Query SS confidence  . . .
























































Query Sequence  . . . ALATASSDGIISVFDCRYPSTAVRTIPSLHGDIMSLKYLKLHSDIIATGGVDGSVVL
Query Conservation  ...





 









 
 
 



 



 
 





 















Alig confidence  ...
















.





















.















Template Conservation            
  
  
   .       
      
       .    
   
 
    
Template Sequence  VYICLTRFIGDSKVMKWGGS. SFQDIQRMPSRGSMVFQPLQIN. NYQYAILGSDYSFTQV
Template Known Secondary structure 
S
SS.SS


T.T

SSS
Template Predicted Secondary structure 







.






.






Template SS confidence 



























































   444.....450.........460... ......470.........480..... ....490.........500.
 
   343......350.........360.........370.........380.......
Predicted Secondary structure  ..



























Query SS confidence  . .












































Query Sequence  . . WNLRSLPTYRVGRAQYKCPVFDLITTPWSVEQHVIGVTCGGELTL
Query Conservation  ..




 


 
 

     
  
        
        
    
Alig confidence  ..


























.
















Template Conservation    

   
                   
 .
    
   
  
   
Template Sequence  YNWDAEKAKFVKFQELNVQAPRSFTHVSI. NKRNFLFASSFKGNTQI
Template Known Secondary structure  TTTT

SS.TTSSS
Template Predicted Secondary structure 









.






Template SS confidence 














































   502.......510.........520.........530 .........540.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D