The files in these sub-directories are meant to be run an a High Performance Computing system, NOT on a PC.
There are directories for each vital rate (growth, survival, and recruitment) that include scripts for running the ridge-regression fits on a High Performance Computing system.
The get_plot_lppd.R
file is script for fetching ridge-regression results (specifically, the log pointwise predictive density from cross-validation model fits) and plotting the lppd versus the prior variance assigned to climate effects.