Ecological Archives E096-226-D1
S. Jennings, S. M. Cogan. 2015. Nitrogen and carbon stable isotope variation in northeast Atlantic fishes and squids. Ecology 96:2568. http://dx.doi.org/10.1890/15-0299.1
Metadata
Class I. Data set descriptors
A. Data set identity: Nitrogen and carbon stable isotope variation in northeast Atlantic fishes and squids.
B. Data set identification code: SIA_N_C_Atlantic_marine_fishes_squids_20150105_v1
C. Data set description: 5535 records of δ15N and δ13C natural abundance for individual marine fishes and squids from the Celtic Sea, Channel, Irish Sea and North Sea in the northeast Atlantic. Data were collected from 2002 to 2010. Individuals from each species in each region were sampled to span the range of body sizes present. For species with juvenile stages living offshore the sampling included juveniles. For species with juvenile stages using estuaries and coastal habitats it did not. The range of species and body sizes included in the dataset and the associated δ15N and δ13C estimates for muscle tissue are summarized in Figs. 1 and 2.
Principal Investigator: Simon Jennings, Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, Suffolk, NR33 0HT, UK. simon.jennings@cefas.co.uk).
Abstract: Nitrogen and carbon stable isotope data are frequently used to describe the origins and transformations of organic matter. Nitrogen stable isotopes (δ15N) in tissue are used to estimate species’ trophic levels, the extent of omnivory, food chain length, and community-wide relationships between body size and trophic level; the latter leading to estimates of predator–prey mass ratios for parameterization, calibration, and validation of food web models. Carbon stable isotopes (δ13C) are used to identify pathways linking producers and consumers and for studies of migration and movement. Collectively, δ15N and δ13C, often with other stable isotopes such as δ34S, may be used to define the contribution of different producers and pathways to consumer production, to assess the trophic impacts of invasive species and habitat modification, and to predict past habitat use, movements, and migrations. Stable isotope data often complement dietary data (e.g., from stomach contents) in food web studies, because stable isotope composition is indicative of assimilated diet over months to years, depending on species, size, environment, and tissue type. There are relatively few large-scale compilations of δ15N and δ13C data for marine species from offshore habitats, but such data facilitate comparative analysis and research into food web structure and function. The data provided comprise 5535 records for individuals of 62 species of fish and squid weighing 0.3 g to 17920 g and sampled from the northeast Atlantic shelf seas (Celtic Sea, North Sea, Irish Sea, Channel) from 2002 to 2010. For every sampled individual the record lists: species name, date of sampling, position of sampling, body mass, percentage nitrogen in muscle tissue, percentage carbon in muscle tissue, and δ15N and δ13C natural abundance in muscle tissue. Awareness of, and access to, these data should catalyze and facilitate new research with stable isotopes, to improve understanding of marine biology, food web ecology, and human impacts on the environment.
D. Key words: body size; cephalopod; consumer; elasmobranch; food chain; food web; marine; producer; teleost; trophic position; stable isotopes.
Class II. Research origin descriptors
A. Overall project description
Identity: Marine food webs
Originator: Simon Jennings, Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, Suffolk, NR33 0HT, UK.
Period of Study: 2002–ongoing
Objectives: To improve knowledge of marine food webs; to support development of models of human and environmental impacts.
Sources of funding:U.K. Department of Environment, Food and Rural Affairs. Grants: MF0731 “Development and testing of ecological indicators and models to monitor and predict the ecosystem effects of fishing” (2002–2007), MF1001 “Ecosystem approach to fisheries” (2007–2012) and MF1225 “Developing the evidence base to support the integration of fisheries and environmental management” (2012, ongoing).
Class III. Data set status and accessibility
A. Status
Latest update: 1 May 2015.
Latest Archive date: 1 May 2015
Metadata status: The metadata are complete and up to date.
Data verification: Data quality has been checked as described in Class V, section B, below.
B. Accessibility
Storage location and medium: As well as being made available by Ecological Archives, copies of the latest version of the data file are stored on the network at the Centre for Environment, Fisheries and Aquaculture Science.
Contact person: Simon Jennings, Centre for Environment, Fisheries and Aquaculture Science, Lowestoft,Suffolk, NR33 0HT, UK.
Phone: +44 1502 562244, Fax: +44 1502 513865
E-mail: simon.jennings@cefas.co.uk
Copyright restrictions: None.
Proprietary restrictions: None.
Costs: None.
Class IV. Data structural descriptors
A. Data Set File
Identity: SIA_N_C_Atlantic_marine_fishes_squids_20150105_v1.csv
Size: 5535 records, excluding header row.
Format and storage mode: Text file “.csv” format.
Header information: Headers describe contents of columns. Detailed descriptions of column headers and contents are provided in Section B.
Alphanumeric attributes: Mixed.
Special characters/fields: None. All character and numeric fields are complete and follow descriptions in Table 1.
Authentication procedures: The data set comprises 5536 rows by 12 columns, including one row of headers (variable names). The sums of the 5535 records in each of the 10 columns containing numeric data are: “record”=15320880; “year”= 11112889; “DOY”= 1372534; “latitude”= 300563.1; “longitude”= -8533.36; “mass”= 2473971; “Nperc”=77571.26; “Cperc”= 254435.4; “d15N” =70738.57; “d13C”= -99601.6.
B. Variable information
Table 1 provides the name and description for each variable identified in the data set. Details of species identities are elaborated in Table 2.
Table 1. Details of variables used in data file “SIA_N_C_Atlantic_marine_fishes_squids_20150105_v1.csv”
Variable name |
Variable definition |
Units |
Data type |
Range of numeric values |
record |
Record number |
N.A. |
Integer |
1:5535 |
species |
Latin binomial species name (see Table 2 for list of species and taxonomic classification) |
N.A. |
Character |
N.A. |
year |
Year of sampling |
year |
Integer |
2002 : 2010 |
DOY |
Day of year of sampling (from 1 January = DOY 1) in year of sampling |
day |
Integer |
168 : 335 |
latitude |
Latitude at sampling position (N) |
Degrees |
Numeric |
49.05 : 59.50 |
longitude |
Longitude at sampling position (E, positive values; W, negative values) |
Degrees |
Numeric |
-08.91 : 02.00 |
sea |
Sea area that includes sampling position |
N.A. |
Character |
N.A. |
mass |
Total wet mass of sampled individual |
g |
Numeric |
0.3 : 17920 |
Nperc |
Percentage nitrogen by mass in dried muscle tissue |
% |
Numeric |
2.65 : 28.86 |
Cperc |
Percentage carbon by mass in dried muscle tissue |
% |
Numeric |
11.20 : 93.86 |
d15N |
Nitrogen stable isotope content of muscle tissue as δ15N |
‰ |
Numeric |
5.77 : 19.25 |
d13C |
Nitrogen stable isotope content of muscle tissue as δ13C |
‰ |
Numeric |
-26.97 : -13.79 |
Table 2. Sampled species, taxonomic affiliations and size ranges of fishes for which δ15N and δ13C data are provided. Aphia ID is the unique species identification number used in the “World Register of Marine Species” (WoRMS).
Species |
Authority |
Common name (U.K.) |
Aphia ID |
Class |
Order |
Family |
Number |
Minimum |
Maximum |
Agonus cataphractus |
(Linnaeus, 1758) |
pogge |
127190 |
Actinopterygii |
Scorpaeniformes |
Agonidae |
66 |
0.4 |
21.7 |
Alloteuthis subulata |
(Lamarck, 1798) |
squid |
153131 |
Cephalopoda |
Myopsida |
Loliginidae |
56 |
1.8 |
14.9 |
Amblyraja radiata |
(Donovan, 1808) |
starry ray |
105865 |
Elasmobranchii |
Rajiformes |
Rajidae |
144 |
5.3 |
735.0 |
Argentina silus |
(Ascanius, 1775) |
argentine |
126715 |
Actinopterygii |
Osmeriformes |
Argentinidae |
33 |
1.4 |
60.2 |
Arnoglossus laterna |
(Walbaum, 1792) |
scaldfish |
127126 |
Actinopterygii |
Pleuronectiformes |
Bothidae |
80 |
0.3 |
60.5 |
Bathyraja brachyurops |
(Fowler, 1910) |
blonde ray |
271509 |
Elasmobranchii |
Rajiformes |
Arhynchobatidae |
11 |
98.0 |
1942.0 |
Buglossidium luteum |
(Risso, 1810) |
solenette |
127153 |
Actinopterygii |
Pleuronectiformes |
Soleidae |
86 |
0.6 |
39.8 |
Callionymus lyra |
Linnaeus, 1758 |
common dragonet |
126792 |
Actinopterygii |
Perciformes |
Callionymidae |
187 |
1.0 |
166.0 |
Callionymus maculatus |
Rafinesque, 1810 |
spotted dragonet |
126793 |
Actinopterygii |
Perciformes |
Callionymidae |
25 |
0.9 |
23.6 |
Capros aper |
(Linnaeus, 1758) |
boarfish |
127419 |
Actinopterygii |
Perciformes |
Caproidae |
37 |
0.6 |
94.0 |
Chelidonichthys cuculus |
(Linnaeus, 1758) |
red gurnard |
127259 |
Actinopterygii |
Scorpaeniformes |
Triglidae |
102 |
22.1 |
508.6 |
Chelidonichthys lucerna |
(Linnaeus, 1758) |
tub gurnard |
127262 |
Actinopterygii |
Scorpaeniformes |
Triglidae |
85 |
15.1 |
1679.0 |
Clupea harengus |
Linnaeus, 1758 |
herring |
126417 |
Actinopterygii |
Clupeiformes |
Clupeidae |
161 |
2.9 |
394.0 |
Conger conger |
(Linnaeus, 1758) |
conger eel |
126285 |
Actinopterygii |
Anguilliformes |
Congridae |
15 |
99.0 |
17920.0 |
Dicentrarchus labrax |
(Linnaeus, 1758) |
bass |
126975 |
Actinopterygii |
Perciformes |
Moronidae |
15 |
32.4 |
1275.0 |
Echiichthys vipera |
(Cuvier, 1829) |
lesser weaver |
150630 |
Actinopterygii |
Perciformes |
Trachinidae |
89 |
4.4 |
57.8 |
Eutrigla gurnardus |
(Linnaeus, 1758) |
grey gurnard |
150637 |
Actinopterygii |
Scorpaeniformes |
Triglidae |
248 |
1.7 |
724.5 |
Gadus morhua |
Linnaeus, 1758 |
cod |
126436 |
Actinopterygii |
Gadiformes |
Gadidae |
228 |
5.2 |
13960.0 |
Glyptocephalus cynoglossus |
(Linnaeus, 1758) |
witch |
127136 |
Actinopterygii |
Pleuronectiformes |
Pleuronectidae |
42 |
2.6 |
643.0 |
Hippoglossoides platessoides |
(Fabricius, 1780) |
long rough dab |
127137 |
Actinopterygii |
Pleuronectiformes |
Pleuronectidae |
188 |
0.8 |
215.4 |
Hyperoplus immaculatus |
(Corbin, 1950) |
sandeel |
126755 |
Actinopterygii |
Perciformes |
Ammodytidae |
15 |
14.3 |
90.5 |
Lepidorhombus whiffiagonis |
(Walbaum, 1792) |
megrim |
127146 |
Actinopterygii |
Pleuronectiformes |
Scophthalmidae |
57 |
1.8 |
1943.0 |
Leucoraja naevus |
(Müller & Henle, 1841) |
cuckoo ray |
105876 |
Elasmobranchii |
Rajiformes |
Rajidae |
26 |
36.7 |
1183.0 |
Limanda limanda |
(Linnaeus, 1758) |
dab |
127139 |
Actinopterygii |
Pleuronectiformes |
Pleuronectidae |
295 |
1.3 |
504.8 |
Loligo forbesii |
Steenstrup, 1857 |
northern squid |
416668 |
Cephalopoda |
Myopsida |
Loliginidae |
59 |
2.1 |
1970.0 |
Lophius piscatorius |
Linnaeus, 1758 |
anglerfish |
126555 |
Actinopterygii |
Lophiiformes |
Lophiidae |
159 |
6.3 |
15750.0 |
Maurolicus muelleri |
(Gmelin, 1789) |
pearlside |
127312 |
Actinopterygii |
Stomiiformes |
Sternoptychidae |
10 |
0.3 |
2.4 |
Melanogrammus aeglefinus |
(Linnaeus, 1758) |
haddock |
126437 |
Actinopterygii |
Gadiformes |
Gadidae |
227 |
4.4 |
4040.0 |
Merlangius merlangus |
(Linnaeus, 1758) |
whiting |
126438 |
Actinopterygii |
Gadiformes |
Gadidae |
319 |
2.2 |
1980.0 |
Merluccius merluccius |
(Linnaeus, 1758) |
hake |
126484 |
Actinopterygii |
Gadiformes |
Merlucciidae |
58 |
4.6 |
8090.0 |
Microchirus variegatus |
(Donovan, 1808) |
thickback sole |
274304 |
Actinopterygii |
Pleuronectiformes |
Soleidae |
96 |
0.3 |
93.4 |
Micromesistius poutassou |
(Risso, 1827) |
blue whiting |
126439 |
Actinopterygii |
Gadiformes |
Gadidae |
48 |
19.9 |
306.6 |
Microstomus kitt |
(Walbaum, 1792) |
lemon sole |
127140 |
Actinopterygii |
Pleuronectiformes |
Pleuronectidae |
217 |
12.6 |
745.0 |
Molva molva |
(Linnaeus, 1758) |
ling |
126461 |
Actinopterygii |
Gadiformes |
Lotidae |
9 |
69.1 |
3734.0 |
Mustelus asterias |
Cloquet, 1819 |
starry smoothhound |
105821 |
Elasmobranchii |
Carcharhiniformes |
Triakidae |
37 |
50.4 |
2304.0 |
Myoxocephalus scorpius |
(Linnaeus, 1758) |
bullrout |
127203 |
Actinopterygii |
Scorpaeniformes |
Cottidae |
19 |
26.8 |
222.8 |
Pegusa lascaris |
(Risso, 1810) |
sand sole |
127156 |
Actinopterygii |
Pleuronectiformes |
Soleidae |
31 |
22.3 |
311.8 |
Pleuronectes platessa |
Linnaeus, 1758 |
plaice |
127143 |
Actinopterygii |
Pleuronectiformes |
Pleuronectidae |
279 |
4.7 |
1819.0 |
Pollachius pollachius |
(Linnaeus, 1758) |
pollack |
126440 |
Actinopterygii |
Gadiformes |
Gadidae |
7 |
207.4 |
1870.0 |
Pollachius virens |
(Linnaeus, 1758) |
saithe |
126441 |
Actinopterygii |
Gadiformes |
Gadidae |
147 |
28.2 |
11720.0 |
Raja clavata |
Linnaeus, 1758 |
thornback ray |
105883 |
Elasmobranchii |
Rajiformes |
Rajidae |
118 |
20.8 |
5460.0 |
Raja microocellata |
Montagu, 1818 |
painted ray |
105885 |
Elasmobranchii |
Rajiformes |
Rajidae |
8 |
261.0 |
4210.0 |
Raja montagui |
Fowler, 1910 |
spotted ray |
105887 |
Elasmobranchii |
Rajiformes |
Rajidae |
64 |
18.4 |
1671.0 |
Sardina pilchardus |
(Walbaum, 1792) |
pilchard |
126421 |
Actinopterygii |
Clupeiformes |
Clupeidae |
23 |
7.7 |
141.8 |
Scomber scombrus |
Linnaeus, 1758 |
mackerel |
127023 |
Actinopterygii |
Perciformes |
Scombridae |
155 |
17.6 |
864.0 |
Scophthalmus rhombus |
(Linnaeus, 1758) |
brill |
127150 |
Actinopterygii |
Pleuronectiformes |
Scophthalmidae |
45 |
170.7 |
2420.0 |
Scyliorhinus canicula |
(Linnaeus, 1758) |
lesser spotted dogfish |
105814 |
Elasmobranchii |
Carcharhiniformes |
Scyliorhinidae |
183 |
3.8 |
1099.5 |
Scyliorhinus stellaris |
(Linnaeus, 1758) |
nurse hound |
105815 |
Elasmobranchii |
Carcharhiniformes |
Scyliorhinidae |
1 |
263.2 |
263.2 |
Sepia officinalis |
Linnaeus, 1758 |
cuttlefish |
141444 |
Cephalopoda |
Sepiida |
Sepiidae |
64 |
3.2 |
1295.0 |
Solea solea |
(Linnaeus, 1758) |
sole |
127160 |
Actinopterygii |
Pleuronectiformes |
Soleidae |
124 |
15.1 |
1267.0 |
Spondyliosoma cantharus |
(Linnaeus, 1758) |
black sea bream |
127066 |
Actinopterygii |
Perciformes |
Sparidae |
17 |
2.7 |
52.5 |
Sprattus sprattus |
(Linnaeus, 1758) |
sprat |
126425 |
Actinopterygii |
Clupeiformes |
Clupeidae |
32 |
2.4 |
25.8 |
Squalus acanthias |
Linnaeus, 1758 |
spurdog |
105923 |
Elasmobranchii |
Squaliformes |
Squalidae |
12 |
341.0 |
4730.0 |
Syngnathus acus |
Linnaeus, 1758 |
greater pipefish |
127387 |
Actinopterygii |
Syngnathiformes |
Syngnathidae |
11 |
1.6 |
42.6 |
Taurulus bubalis |
(Euphrasen, 1786) |
sea scorpion |
127204 |
Actinopterygii |
Scorpaeniformes |
Cottidae |
2 |
11.8 |
29.4 |
Trachinus draco |
Linnaeus, 1758 |
greater weever |
127082 |
Actinopterygii |
Perciformes |
Trachinidae |
23 |
39.1 |
412.0 |
Trachurus trachurus |
(Linnaeus, 1758) |
scad |
126822 |
Actinopterygii |
Perciformes |
Carangidae |
139 |
1.0 |
610.0 |
Trigloporus lastoviza |
(Bonnaterre, 1788) |
streaked gurnard |
154462 |
Actinopterygii |
Scorpaeniformes |
Triglidae |
36 |
30.4 |
452.0 |
Trisopterus esmarkii |
(Nilsson, 1855) |
Norway pout |
126444 |
Actinopterygii |
Gadiformes |
Gadidae |
232 |
2.2 |
135.3 |
Trisopterus luscus |
(Linnaeus, 1758) |
pout |
126445 |
Actinopterygii |
Gadiformes |
Gadidae |
59 |
4.3 |
693.0 |
Trisopterus minutus |
(Linnaeus, 1758) |
poor cod |
126446 |
Actinopterygii |
Gadiformes |
Gadidae |
114 |
3.3 |
161.8 |
Zeus faber |
Linnaeus, 1758 |
john dory |
127427 |
Actinopterygii |
Zeiformes |
Zeidae |
60 |
2.0 |
2169.0 |
Fig. 1. Summary of the ranges of species and body sizes for which δ15N data are available. Data presented are for all sampling years and areas combined. Vertical blue bars indicate mean δ15N by species. Points are ‘jittered’ (i.e., offset) to increase visibility. Taxonomy follows Table 2.