Predicted piRNA cluster no. 118     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrO_v4 
15758187
15767520
Gene Set
RepeatMasker
Mapped
Reads
61.14
plus strand
minus strand
61.14
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation
1. unknown (unknowndsub_v4_00001601) Tr:4: 15767241-15767359 (-)
2. unknown (unknowndsub_v4_00001601) Tr:4: 15760445-15760613 (-)
3. unknown (unknowndsub_v4_00001601) Tr:4: 15760260-15760313 (-)

RepeatMasker Annotation
1. GYPSY-7_Dsub: 15760419-15760776 (+), Divergence to consensus: 0.3%
2. GYPSY-8_Dsub: 15760774-15766107 (+), Divergence to consensus: 0.4%
3. GYPSY-8_Dsub: 15766093-15767164 (+), Divergence to consensus: 0.2%
4. GYPSY-7_Dsub: 15767165-15767519 (+), Divergence to consensus: 0.3%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATAG (-): 15766113)
RFX4_2 (Sequence: CCTAGATAC (+): 15764538)
FOXP1 (Sequence: TGTTTAC (-): 15759431)
FOXP1 (Sequence: TGTTTAC (-): 15759665)
FOXP1 (Sequence: TGTTTAC (-): 15760400)
FIGLA (Sequence: TACAGGTGTT (-): 15764185)
Lhx8 (Sequence: CTAATTAA (-): 15761171)
Rhox11 (Sequence: TGGTGTAAA (+): 15760059)
FOXP1 (Sequence: GTAAACA (+): 15766194)
FOXO1 (Sequence: GTTGTTTTT (+): 15758732)
FOXO1 (Sequence: GCTGTTTAC (+): 15760398)
POU5F1 (Sequence: ATGCAAA (+): 15759483)
POU5F1 (Sequence: ATGCAAA (+): 15760145)
POU5F1 (Sequence: ATGCAAA (+): 15766108)
FOXO3_mmu (Sequence: TGTTTACA (-): 15759665)
FOXO3_mmu (Sequence: TGTTTACA (-): 15760400)
POU2F1 (Sequence: TATGCAAAT (+): 15759482)
Nobox (Sequence: TAATTGCT (+): 15759954)
RHOXF1 (Sequence: AGCTCA (-): 15759053)
RHOXF1 (Sequence: AGATCA (-): 15759993)
RHOXF1 (Sequence: AGATTA (-): 15760096)
RHOXF1 (Sequence: AGATTA (-): 15760201)
RHOXF1 (Sequence: GGCTCA (-): 15760357)
RHOXF1 (Sequence: AGATCA (-): 15760879)
RHOXF1 (Sequence: AGATCA (-): 15761739)
RHOXF1 (Sequence: AGATTA (-): 15762063)
RHOXF1 (Sequence: GGATTA (-): 15762209)
RHOXF1 (Sequence: AGCTCA (-): 15762249)
RHOXF1 (Sequence: GGCTTA (-): 15762353)
RHOXF1 (Sequence: GGCTCA (-): 15763603)
RHOXF1 (Sequence: AGCTTA (-): 15763640)
RHOXF1 (Sequence: GGATCA (-): 15763959)
RHOXF1 (Sequence: AGATCA (-): 15764158)
RHOXF1 (Sequence: AGATCA (-): 15764258)
RHOXF1 (Sequence: AGATTA (-): 15765788)
RHOXF1 (Sequence: AGCTCA (-): 15766471)
RHOXF1 (Sequence: AGATCA (-): 15766564)
RHOXF1 (Sequence: GGATTA (-): 15766894)
FOXO3_mmu (Sequence: GGAAAACA (+): 15759856)
Sox5 (Sequence: ATTGTT (+): 15761405)
Sox5 (Sequence: ATTGTT (+): 15761487)
Sox5 (Sequence: ATTGTT (+): 15761668)
FOXO1 (Sequence: GTAAACAAG (-): 15766194)
Nobox (Sequence: ACTAATTA (-): 15761170)
Nobox (Sequence: ACCAATTA (-): 15766180)
Mybl1_1 (Sequence: AACCGTTA (+): 15766172)
SOX9 (Sequence: TCATTGTT (+): 15761403)
POU5F1 (Sequence: TTTGCAT (-): 15759464)
A-MYB (Sequence: CCAACTGCCT (-): 15762674)
RHOXF1 (Sequence: TGAGCT (+): 15758292)
RHOXF1 (Sequence: TAAGCT (+): 15759051)
RHOXF1 (Sequence: TAAGCT (+): 15759448)
RHOXF1 (Sequence: TAAGCC (+): 15759810)
RHOXF1 (Sequence: TAATCT (+): 15760701)
RHOXF1 (Sequence: TGATCT (+): 15761584)
RHOXF1 (Sequence: TAAGCT (+): 15761998)
RHOXF1 (Sequence: TGAGCC (+): 15762535)
RHOXF1 (Sequence: TGATCC (+): 15762646)
RHOXF1 (Sequence: TAATCC (+): 15764858)
RHOXF1 (Sequence: TAAGCT (+): 15766469)
RHOXF1 (Sequence: TGAGCC (+): 15766924)
RHOXF1 (Sequence: TGAGCT (+): 15767125)
RHOXF1 (Sequence: TAATCT (+): 15767447)
Rhox11 (Sequence: ATAACACCG (-): 15761466)
Rhox11 (Sequence: AATACACCA (-): 15766837)
FOXO3_hsa (Sequence: GTAAACAA (+): 15766194)
Gata4 (Sequence: AGATAAC (-): 15760052)
Gata4 (Sequence: AGATAAG (-): 15766010)
FOXO3_hsa (Sequence: ATGTTTAC (-): 15759430)
Gata4 (Sequence: GTTATCT (+): 15759341)
Sox5 (Sequence: AACAAT (-): 15759860)
Sox5 (Sequence: AACAAT (-): 15761148)
Sox5 (Sequence: AACAAT (-): 15762581)
Sox5 (Sequence: AACAAT (-): 15762837)
Sox5 (Sequence: AACAAT (-): 15764781)
Sox5 (Sequence: AACAAT (-): 15766113)
Sox5 (Sequence: AACAAT (-): 15766851)