Predicted piRNA cluster no. 151     previous   next

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Show proTRAC cluster info

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
4079002
4085726
Gene Set
RepeatMasker
Mapped
Reads
7.14
plus strand
minus strand
7.14
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. GYPSY-18_Dsub: 4078414-4080564 (+), Divergence to consensus: 3.2%
2. GYPSY-18_Dsub: 4080565-4085583 (+), Divergence to consensus: 1%
3. GYPSY-18_Dsub: 4085584-4085726 (+), Divergence to consensus: 0%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATAG (-): 4080683)
RFX4_2 (Sequence: CGTAGTTAC (+): 4083404)
Lhx8 (Sequence: TTAATTAG (-): 4083456)
FOXO3_mmu (Sequence: TGTTTTGA (-): 4080090)
FOXO3_mmu (Sequence: TGTTTTGC (-): 4081277)
FOXO3_mmu (Sequence: TGTTTTGA (-): 4085252)
POU2F1 (Sequence: TATTCAAAT (+): 4081142)
Nobox (Sequence: TAATTGGC (+): 4080565)
Nobox (Sequence: TAATTAGC (+): 4083457)
RHOXF1 (Sequence: AGCTCA (-): 4079699)
RHOXF1 (Sequence: AGATCA (-): 4079734)
RHOXF1 (Sequence: AGATTA (-): 4080021)
RHOXF1 (Sequence: AGATCA (-): 4080290)
RHOXF1 (Sequence: AGCTTA (-): 4080475)
RHOXF1 (Sequence: GGATTA (-): 4080752)
RHOXF1 (Sequence: AGATCA (-): 4080883)
RHOXF1 (Sequence: AGCTTA (-): 4081102)
RHOXF1 (Sequence: AGATCA (-): 4081394)
RHOXF1 (Sequence: AGCTCA (-): 4083102)
RHOXF1 (Sequence: AGCTTA (-): 4083696)
RHOXF1 (Sequence: AGATCA (-): 4083831)
RHOXF1 (Sequence: AGCTTA (-): 4084022)
RHOXF1 (Sequence: AGCTCA (-): 4084861)
RHOXF1 (Sequence: AGATCA (-): 4084896)
RHOXF1 (Sequence: AGATTA (-): 4085183)
RHOXF1 (Sequence: AGATCA (-): 4085452)
RHOXF1 (Sequence: AGCTTA (-): 4085637)
Sox5 (Sequence: ATTGTT (+): 4079647)
Sox5 (Sequence: ATTGTT (+): 4081208)
Sox5 (Sequence: ATTGTT (+): 4084809)
POU2F1 (Sequence: ATTAGCATA (-): 4083459)
POU5F1 (Sequence: TTTGCAT (-): 4081363)
RHOXF1 (Sequence: TGATCC (+): 4079114)
RHOXF1 (Sequence: TAAGCT (+): 4079310)
RHOXF1 (Sequence: TAAGCC (+): 4079348)
RHOXF1 (Sequence: TGAGCT (+): 4079697)
RHOXF1 (Sequence: TAATCT (+): 4079955)
RHOXF1 (Sequence: TGATCC (+): 4080328)
RHOXF1 (Sequence: TAATCT (+): 4081369)
RHOXF1 (Sequence: TAAGCC (+): 4082645)
RHOXF1 (Sequence: TAATCC (+): 4082666)
RHOXF1 (Sequence: TAAGCT (+): 4082877)
RHOXF1 (Sequence: TGAGCT (+): 4082932)
RHOXF1 (Sequence: TGAGCT (+): 4082981)
RHOXF1 (Sequence: TAAGCT (+): 4083392)
RHOXF1 (Sequence: TGAGCT (+): 4083878)
RHOXF1 (Sequence: TGATCC (+): 4084275)
RHOXF1 (Sequence: TAAGCT (+): 4084472)
RHOXF1 (Sequence: TAAGCC (+): 4084510)
RHOXF1 (Sequence: TGAGCT (+): 4084859)
RHOXF1 (Sequence: TAATCT (+): 4085117)
RHOXF1 (Sequence: TGATCC (+): 4085490)
Gata4 (Sequence: AGATAAG (-): 4081389)
Gata4 (Sequence: AGATAAG (-): 4082874)
Gata4 (Sequence: GTTATCT (+): 4080964)
Gata4 (Sequence: CTTATCT (+): 4083748)
Sox5 (Sequence: AACAAT (-): 4080683)