Predicted piRNA cluster no. 115     previous   next

Show proTRAC run info

Show proTRAC cluster info

Hide read coverage
1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrO_v4 
10784335
10789680
Gene Set
RepeatMasker
Mapped
Reads
6.71
plus strand
minus strand
6.71
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. R1-1_Dsub: 10784318-10789682 (-), Divergence to consensus: 0.9%

Transcription Factor Binding Sites
RHOXF1 (Sequence: GGATCA (-): 10786171)
RHOXF1 (Sequence: GGATCA (-): 10787455)
RHOXF1 (Sequence: GGCTTA (-): 10788414)
Sox5 (Sequence: ATTGTT (+): 10789419)
POU5F1 (Sequence: TTTGCAT (-): 10788581)
RHOXF1 (Sequence: TAAGCC (+): 10785454)
RHOXF1 (Sequence: TGAGCC (+): 10785982)
RHOXF1 (Sequence: TGAGCT (+): 10787449)
RHOXF1 (Sequence: TGAGCT (+): 10788028)
RHOXF1 (Sequence: TGATCT (+): 10788681)
RHOXF1 (Sequence: TGAGCC (+): 10788842)
RFX4_2 (Sequence: GTAACCAGG (-): 10785737)
Sox5 (Sequence: AACAAT (-): 10786355)