Predicted piRNA cluster no. 14     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrA_v4 
461001
478026
Gene Set
RepeatMasker
Mapped
Reads
31.07
plus strand
minus strand
31.07
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. BILBO-1_Dsub: 460522-463204 (-), Divergence to consensus: 4.6%
2. TE-387_Dsub: 463183-463248 (-), Divergence to consensus: 11.9%
3. TE-556_Dsub: 463200-463903 (+), Divergence to consensus: 17.1%
4. TE-581_Dsub: 463667-463934 (-), Divergence to consensus: 12%
5. BILBO-1_Dsub: 463896-466111 (-), Divergence to consensus: 6.7%
6. TE-614_Dsub: 466114-466364 (+), Divergence to consensus: 21.1%
7. TE-634_Dsub: 466366-468311 (+), Divergence to consensus: 1.6%
8. BILBO-1_Dsub: 468351-471036 (-), Divergence to consensus: 4.3%
9. TE-387_Dsub: 471015-471080 (-), Divergence to consensus: 11.9%
10. TE-556_Dsub: 471032-471735 (+), Divergence to consensus: 17.2%
11. TE-581_Dsub: 471499-471766 (-), Divergence to consensus: 12%
12. BILBO-1_Dsub: 471728-474001 (-), Divergence to consensus: 7.6%
13. TE-622_Dsub: 473996-474822 (-), Divergence to consensus: 19.5%
14. TE-614_Dsub: 474746-474988 (+), Divergence to consensus: 20.9%
15. TE-634_Dsub: 474990-475369 (+), Divergence to consensus: 13.3%
16. TE-634_Dsub: 475362-476856 (+), Divergence to consensus: 1.3%
17. TE-565_Dsub: 476848-476999 (-), Divergence to consensus: 31.7%
18. TE-614_Dsub: 476865-477155 (+), Divergence to consensus: 21.5%
19. TE-634_Dsub: 477157-477337 (+), Divergence to consensus: 1.1%
20. TE-622_Dsub: 477313-477333 (-), Divergence to consensus: 25.5%
21. TE-581_Dsub: 477334-478142 (+), Divergence to consensus: 13.6%

Transcription Factor Binding Sites
FOXP1 (Sequence: TGTTTAC (-): 462908)
FOXP1 (Sequence: TGTTTAC (-): 470740)
FIGLA (Sequence: ACCAGGTGGT (-): 461469)
FIGLA (Sequence: AACAGGTGTT (-): 468607)
FIGLA (Sequence: ACCAGGTGGT (-): 469301)
Rhox11 (Sequence: TGGTGTTTT (+): 464869)
Rhox11 (Sequence: TGGTGTTTT (+): 472701)
FOXP1 (Sequence: GTAAACA (+): 462085)
FOXP1 (Sequence: GTAAACA (+): 469917)
FOXO1 (Sequence: GCTGTTTAC (+): 462906)
FOXO1 (Sequence: GCTGTTTAC (+): 470738)
POU5F1 (Sequence: ATGCAAA (+): 474497)
POU5F1 (Sequence: ATGCAAA (+): 477901)
FOXO3_mmu (Sequence: TGTTTAGA (-): 464008)
FOXO3_mmu (Sequence: TGTTTAGA (-): 471840)
FOXO3_mmu (Sequence: TGTTTTGC (-): 475688)
RHOXF1 (Sequence: GGATTA (-): 462112)
RHOXF1 (Sequence: AGATTA (-): 462551)
RHOXF1 (Sequence: GGATTA (-): 462625)
RHOXF1 (Sequence: AGATCA (-): 463579)
RHOXF1 (Sequence: GGATCA (-): 463603)
RHOXF1 (Sequence: AGCTTA (-): 463915)
RHOXF1 (Sequence: GGATTA (-): 464814)
RHOXF1 (Sequence: AGCTCA (-): 466443)
RHOXF1 (Sequence: AGCTCA (-): 466933)
RHOXF1 (Sequence: AGCTCA (-): 467638)
RHOXF1 (Sequence: GGCTCA (-): 468100)
RHOXF1 (Sequence: AGCTCA (-): 468763)
RHOXF1 (Sequence: GGATTA (-): 469944)
RHOXF1 (Sequence: AGATTA (-): 470383)
RHOXF1 (Sequence: GGATTA (-): 470457)
RHOXF1 (Sequence: GGATCA (-): 471435)
RHOXF1 (Sequence: AGCTTA (-): 471747)
RHOXF1 (Sequence: GGATTA (-): 472646)
RHOXF1 (Sequence: GGCTCA (-): 474447)
RHOXF1 (Sequence: GGCTCA (-): 474594)
RHOXF1 (Sequence: AGCTCA (-): 475067)
RHOXF1 (Sequence: AGCTCA (-): 475381)
RHOXF1 (Sequence: AGCTCA (-): 476086)
RHOXF1 (Sequence: GGCTCA (-): 476649)
RHOXF1 (Sequence: AGCTCA (-): 477234)
RHOXF1 (Sequence: GGCTCA (-): 477851)
RHOXF1 (Sequence: GGCTCA (-): 477998)
FOXO3_mmu (Sequence: TGTAAACA (+): 462084)
FOXO3_mmu (Sequence: TGAAAACA (+): 467284)
FOXO3_mmu (Sequence: TCTAAACA (+): 467397)
FOXO3_mmu (Sequence: TGTAAACA (+): 469916)
FOXO3_mmu (Sequence: TGAAAACA (+): 475732)
Sox5 (Sequence: ATTGTT (+): 461099)
Sox5 (Sequence: ATTGTT (+): 461509)
Sox5 (Sequence: ATTGTT (+): 466675)
Sox5 (Sequence: ATTGTT (+): 468931)
Sox5 (Sequence: ATTGTT (+): 469341)
Sox5 (Sequence: ATTGTT (+): 475304)
FOXO1 (Sequence: GTAAACAAC (-): 462085)
FOXO1 (Sequence: GTAAACAAC (-): 469917)
POU5F1 (Sequence: TTTGCAT (-): 463423)
POU5F1 (Sequence: TTTGCAT (-): 468685)
POU5F1 (Sequence: TTTGCAT (-): 471255)
Mybl1_1 (Sequence: TAACGGTT (-): 463252)
Mybl1_1 (Sequence: TAACGGTT (-): 471084)
RHOXF1 (Sequence: TGAGCT (+): 461043)
RHOXF1 (Sequence: TAAGCC (+): 461192)
RHOXF1 (Sequence: TGATCC (+): 461356)
RHOXF1 (Sequence: TGAGCC (+): 461363)
RHOXF1 (Sequence: TGAGCC (+): 461433)
RHOXF1 (Sequence: TGAGCT (+): 461978)
RHOXF1 (Sequence: TGATCT (+): 462400)
RHOXF1 (Sequence: TGAGCC (+): 462859)
RHOXF1 (Sequence: TGAGCC (+): 464597)
RHOXF1 (Sequence: TAATCC (+): 464776)
RHOXF1 (Sequence: TAAGCT (+): 465157)
RHOXF1 (Sequence: TAAGCC (+): 465925)
RHOXF1 (Sequence: TAAGCC (+): 466579)
RHOXF1 (Sequence: TGAGCT (+): 466931)
RHOXF1 (Sequence: TGAGCT (+): 467032)
RHOXF1 (Sequence: TAATCT (+): 467447)
RHOXF1 (Sequence: TGAGCC (+): 467588)
RHOXF1 (Sequence: TGAGCT (+): 468732)
RHOXF1 (Sequence: TGAGCT (+): 468875)
RHOXF1 (Sequence: TAAGCC (+): 469024)
RHOXF1 (Sequence: TGATCC (+): 469188)
RHOXF1 (Sequence: TGAGCC (+): 469195)
RHOXF1 (Sequence: TGAGCC (+): 469265)
RHOXF1 (Sequence: TGAGCT (+): 469810)
RHOXF1 (Sequence: TGATCT (+): 470232)
RHOXF1 (Sequence: TGAGCC (+): 470691)
RHOXF1 (Sequence: TGAGCC (+): 472429)
RHOXF1 (Sequence: TAATCC (+): 472608)
RHOXF1 (Sequence: TAAGCT (+): 472989)
RHOXF1 (Sequence: TAAGCC (+): 473729)
RHOXF1 (Sequence: TGATCC (+): 474313)
RHOXF1 (Sequence: TGATCT (+): 474337)
RHOXF1 (Sequence: TGAGCT (+): 475379)
RHOXF1 (Sequence: TGAGCT (+): 475480)
RHOXF1 (Sequence: TAATCT (+): 475895)
RHOXF1 (Sequence: TGAGCC (+): 476036)
RHOXF1 (Sequence: TAAGCC (+): 477365)
RHOXF1 (Sequence: TGATCC (+): 477715)
FOXO3_hsa (Sequence: GTAAACAA (+): 462085)
FOXO3_hsa (Sequence: GTAAACAA (+): 469917)
Gata4 (Sequence: AGATAAC (-): 463528)
Gata4 (Sequence: AGATAAC (-): 471360)
Gata4 (Sequence: AGATAAC (-): 471411)
Gata4 (Sequence: CTTATCT (+): 467915)
Gata4 (Sequence: CTTATCT (+): 476359)
Gata4 (Sequence: CTTATCT (+): 476366)
Sox5 (Sequence: AACAAT (-): 466848)