Predicted piRNA cluster no. 145     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
2339001
2349008
Gene Set
RepeatMasker
Mapped
Reads
14.77
plus strand
minus strand
14.77
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. TE-560_Dsub: 2338663-2339483 (+), Divergence to consensus: 11.3%
2. TE-572_Dsub: 2339537-2340123 (-), Divergence to consensus: 27.9%
3. TE-613_Dsub: 2339755-2340404 (+), Divergence to consensus: 34.1%
4. TE-614_Dsub: 2340331-2340420 (-), Divergence to consensus: 20.8%
5. TE-626_Dsub: 2340400-2340538 (-), Divergence to consensus: 9.3%
6. SPOCK-1_Dsub: 2340538-2340618 (+), Divergence to consensus: 1.2%
7. TE-615_Dsub: 2340622-2340970 (-), Divergence to consensus: 7.2%
8. TE-356_Dsub: 2340972-2341042 (+), Divergence to consensus: 18.9%
9. TE-560_Dsub: 2341463-2341476 (-), Divergence to consensus: 18.2%
10. TE-613_Dsub: 2341477-2341592 (+), Divergence to consensus: 12.2%
11. TE-626_Dsub: 2341618-2341854 (+), Divergence to consensus: 9.9%
12. TE-626_Dsub: 2341864-2341905 (-), Divergence to consensus: 4.8%
13. BILBO-1_Dsub: 2341906-2342917 (+), Divergence to consensus: 2.6%
14. BILBO-1_Dsub: 2342921-2347147 (+), Divergence to consensus: 2.4%
15. TE-626_Dsub: 2347144-2347885 (+), Divergence to consensus: 11%
16. TE-500_Dsub: 2347884-2347947 (-), Divergence to consensus: 9.4%
17. TE-571_Dsub: 2347950-2348006 (+), Divergence to consensus: 19.3%
18. TE-566_Dsub: 2347956-2348308 (-), Divergence to consensus: 24.2%
19. BEL-3_Dsub: 2348918-2348971 (-), Divergence to consensus: 22.2%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATGA (-): 2340655)
FOXP1 (Sequence: TGTTTAC (-): 2340511)
FOXP1 (Sequence: TGTTTAC (-): 2345548)
FOXP1 (Sequence: TGTTTAC (-): 2348721)
FIGLA (Sequence: TACACCTGTA (-): 2340227)
FIGLA (Sequence: ACCACCTGGT (-): 2346161)
Rhox11 (Sequence: TGCTGTTTT (+): 2340503)
Rhox11 (Sequence: TGCTGTATT (+): 2347959)
FOXP1 (Sequence: GTAAACA (+): 2344725)
FOXP1 (Sequence: GTAAACA (+): 2347749)
FOXO1 (Sequence: GTTGTTTAC (+): 2345546)
FOXO1 (Sequence: CTTGTTTAC (+): 2348719)
FOXO1 (Sequence: GTTGTTTAT (+): 2348890)
POU5F1 (Sequence: ATGCAAA (+): 2340663)
POU5F1 (Sequence: ATGCAAA (+): 2346805)
POU5F1 (Sequence: ATGCAAA (+): 2347427)
FOXO3_mmu (Sequence: TGTTTACC (-): 2340511)
FOXO3_mmu (Sequence: TGTTTACA (-): 2345548)
FOXO3_mmu (Sequence: TGTTTTCC (-): 2347222)
FOXO3_mmu (Sequence: TGTTTACA (-): 2348721)
POU2F1 (Sequence: TATGCAAAT (+): 2347426)
Nobox (Sequence: TAATTGCT (+): 2340050)
Nobox (Sequence: TAATTGGT (+): 2348687)
RHOXF1 (Sequence: AGATCA (-): 2339049)
RHOXF1 (Sequence: GGATCA (-): 2339073)
RHOXF1 (Sequence: AGCTTA (-): 2339136)
RHOXF1 (Sequence: GGCTCA (-): 2340212)
RHOXF1 (Sequence: AGATTA (-): 2340685)
RHOXF1 (Sequence: AGATTA (-): 2341166)
RHOXF1 (Sequence: AGATTA (-): 2341807)
RHOXF1 (Sequence: GGCTCA (-): 2341933)
RHOXF1 (Sequence: AGCTCA (-): 2342158)
RHOXF1 (Sequence: AGCTCA (-): 2342311)
RHOXF1 (Sequence: AGCTCA (-): 2343177)
RHOXF1 (Sequence: GGATTA (-): 2343573)
RHOXF1 (Sequence: GGCTCA (-): 2343752)
RHOXF1 (Sequence: GGCTCA (-): 2344775)
RHOXF1 (Sequence: AGATCA (-): 2345234)
RHOXF1 (Sequence: AGCTCA (-): 2345656)
RHOXF1 (Sequence: GGCTCA (-): 2346201)
RHOXF1 (Sequence: GGATCA (-): 2346278)
RHOXF1 (Sequence: GGCTTA (-): 2346467)
RHOXF1 (Sequence: AGCTCA (-): 2346616)
RHOXF1 (Sequence: AGCTCA (-): 2346759)
RHOXF1 (Sequence: GGCTTA (-): 2347880)
RHOXF1 (Sequence: AGATCA (-): 2348028)
RHOXF1 (Sequence: GGATCA (-): 2348052)
RHOXF1 (Sequence: AGCTTA (-): 2348481)
RHOXF1 (Sequence: AGCTTA (-): 2348488)
FOXO3_mmu (Sequence: GCTAAACA (+): 2339735)
FOXO3_mmu (Sequence: GCAAAACA (+): 2339770)
FOXO3_mmu (Sequence: TCTAAACA (+): 2344323)
FOXO3_mmu (Sequence: GGTAAACA (+): 2347748)
RFX4_1 (Sequence: GTTGCCAAG (-): 2347174)
Sox5 (Sequence: ATTGTT (+): 2347491)
Sox5 (Sequence: ATTGTT (+): 2347703)
FOXO1 (Sequence: GTAAACAGC (-): 2344725)
FOXO1 (Sequence: AAAAACAAC (-): 2347668)
Mybl1_1 (Sequence: AACCGTTA (+): 2340345)
POU2F1 (Sequence: ATTTGCATA (-): 2340910)
SOX9 (Sequence: TCATTGTT (+): 2347701)
POU5F1 (Sequence: TTTGCAT (-): 2340875)
POU5F1 (Sequence: TTTGCAT (-): 2340911)
POU5F1 (Sequence: TTTGCAT (-): 2341833)
POU5F1 (Sequence: TTTGCAT (-): 2341874)
Mybl1_1 (Sequence: TAACGGTT (-): 2341556)
RHOXF1 (Sequence: TAAGCT (+): 2339496)
RHOXF1 (Sequence: TGATCC (+): 2340076)
RHOXF1 (Sequence: TAATCC (+): 2340562)
RHOXF1 (Sequence: TGATCC (+): 2341088)
RHOXF1 (Sequence: TGAGCC (+): 2341257)
RHOXF1 (Sequence: TGAGCT (+): 2341760)
RHOXF1 (Sequence: TGATCC (+): 2341911)
RHOXF1 (Sequence: TGATCC (+): 2343129)
RHOXF1 (Sequence: TAATCC (+): 2343535)
RHOXF1 (Sequence: TAAGCT (+): 2344418)
RHOXF1 (Sequence: TAATCT (+): 2344714)
RHOXF1 (Sequence: TAATCT (+): 2345083)
RHOXF1 (Sequence: TAATCC (+): 2345522)
RHOXF1 (Sequence: TAAGCT (+): 2346256)
RHOXF1 (Sequence: TGAGCT (+): 2346328)
RHOXF1 (Sequence: TGAGCT (+): 2346728)
RHOXF1 (Sequence: TAAGCT (+): 2348500)
RHOXF1 (Sequence: TGATCT (+): 2348992)
Rhox11 (Sequence: AATACAGCA (-): 2340169)
FOXO3_hsa (Sequence: GTAAACAA (+): 2347749)
FOXO3_hsa (Sequence: TTGTTTAC (-): 2340510)
FOXO3_hsa (Sequence: TTGTTTAC (-): 2345547)
FOXO3_hsa (Sequence: TTGTTTAC (-): 2348720)
Gata4 (Sequence: GTTATCT (+): 2344004)
Gata4 (Sequence: CTTATCT (+): 2348490)
Sox5 (Sequence: AACAAT (-): 2339481)
Sox5 (Sequence: AACAAT (-): 2340655)
Sox5 (Sequence: AACAAT (-): 2341713)
Sox5 (Sequence: AACAAT (-): 2346560)