Predicted piRNA cluster no. 147     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
2426003
2450022
Gene Set
RepeatMasker
Mapped
Reads
58.08
plus strand
minus strand
58.08
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation
1. unknown (unknowndsub_v4_00003298) Tr:4: 2445597-2446031 (-)

RepeatMasker Annotation
1. TE-622_Dsub: 2425242-2426715 (+), Divergence to consensus: 20.9%
2. TE-597_Dsub: 2426693-2426792 (-), Divergence to consensus: 11%
3. JOCKEY-2_Dsub: 2426769-2427058 (-), Divergence to consensus: 8.6%
4. TE-627_Dsub: 2426836-2427102 (-), Divergence to consensus: 18.9%
5. JOCKEY-5_Dsub: 2427103-2430970 (-), Divergence to consensus: 4.1%
6. TE-633_Dsub: 2431011-2431096 (-), Divergence to consensus: 4.8%
7. TE-223_Dsub: 2431063-2431202 (-), Divergence to consensus: 30.2%
8. TE-330_Dsub: 2433295-2433306 (+), Divergence to consensus: 40%
9. TABOR-1_Dsub: 2433307-2433454 (+), Divergence to consensus: 25.5%
10. TE-606_Dsub: 2433374-2433525 (-), Divergence to consensus: 34.1%
11. TE-330_Dsub: 2433455-2433527 (+), Divergence to consensus: 40%
12. TE-622_Dsub: 2433526-2433650 (+), Divergence to consensus: 12.8%
13. TE-606_Dsub: 2433651-2433667 (-), Divergence to consensus: 34.1%
14. TE-642_Dsub: 2433674-2433705 (+), Divergence to consensus: 12.5%
15. TE-636_Dsub: 2433702-2433875 (-), Divergence to consensus: 16.2%
16. TE-223_Dsub: 2433866-2433960 (-), Divergence to consensus: 16.1%
17. TE-600_Dsub: 2433897-2434039 (+), Divergence to consensus: 34.3%
18. TE-356_Dsub: 2435129-2435177 (-), Divergence to consensus: 22.4%
19. TE-322_Dsub: 2435180-2435321 (+), Divergence to consensus: 38.3%
20. TE-622_Dsub: 2435321-2435378 (+), Divergence to consensus: 37%
21. TE-561_Dsub: 2435379-2435509 (-), Divergence to consensus: 20.7%
22. BILBO-1_Dsub: 2435566-2436066 (+), Divergence to consensus: 26.3%
23. TE-603_Dsub: 2436033-2436158 (+), Divergence to consensus: 10.1%
24. TE-560_Dsub: 2436056-2436703 (-), Divergence to consensus: 12.6%
25. CR1-4_Dsub: 2436702-2440449 (-), Divergence to consensus: 2%
26. BILBO-1_Dsub: 2440449-2441058 (+), Divergence to consensus: 28.5%
27. BILBO-1_Dsub: 2441059-2443080 (+), Divergence to consensus: 27%
28. BILBO-1_Dsub: 2443083-2443382 (+), Divergence to consensus: 28.6%
29. BILBO-1_Dsub: 2443395-2443961 (+), Divergence to consensus: 31%
30. TE-462_Dsub: 2443962-2444145 (+), Divergence to consensus: 20.8%
31. TE-493_Dsub: 2444149-2444277 (+), Divergence to consensus: 7.8%
32. TE-493_Dsub: 2444278-2444753 (+), Divergence to consensus: 27.2%
33. TE-198_Dsub: 2444892-2444943 (-), Divergence to consensus: 40.2%
34. TE-250_Dsub: 2444944-2445076 (+), Divergence to consensus: 18.6%
35. TE-634_Dsub: 2445131-2445206 (-), Divergence to consensus: 13.2%
36. TE-493_Dsub: 2445205-2445413 (+), Divergence to consensus: 24.6%
37. TE-113_Dsub: 2445410-2445698 (-), Divergence to consensus: 16.4%
38. TE-113_Dsub: 2445759-2446674 (-), Divergence to consensus: 15%
39. TE-493_Dsub: 2446610-2446683 (+), Divergence to consensus: 21.8%
40. TE-493_Dsub: 2446657-2446832 (+), Divergence to consensus: 10.3%
41. TE-579_Dsub: 2446833-2448036 (+), Divergence to consensus: 1.3%
42. TE-322_Dsub: 2448006-2448052 (-), Divergence to consensus: 14.9%
43. TE-493_Dsub: 2448057-2448230 (+), Divergence to consensus: 15.5%
44. TE-462_Dsub: 2448232-2448287 (+), Divergence to consensus: 19.7%
45. TE-614_Dsub: 2448319-2448696 (-), Divergence to consensus: 24.6%
46. TE-572_Dsub: 2448648-2448705 (+), Divergence to consensus: 10.3%
47. TE-189_Dsub: 2448670-2448710 (-), Divergence to consensus: 15.1%
48. TE-569_Dsub: 2448748-2448901 (+), Divergence to consensus: 25.5%
49. TE-165_Dsub: 2448768-2449037 (+), Divergence to consensus: 33.2%
50. TE-83_Dsub: 2448954-2448973 (-), Divergence to consensus: 36.4%
51. TABOR-1_Dsub: 2448974-2449045 (-), Divergence to consensus: 12.9%
52. TE-572_Dsub: 2449315-2449394 (-), Divergence to consensus: 11.9%
53. TE-622_Dsub: 2449331-2450133 (+), Divergence to consensus: 6.8%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATAA (-): 2433468)
RFX4_2 (Sequence: CTTAGTTAC (+): 2426822)
FOXP1 (Sequence: TGTTTAC (-): 2438680)
FIGLA (Sequence: TACAGCTGGA (-): 2427330)
FIGLA (Sequence: AACAGGTGGT (-): 2430738)
FIGLA (Sequence: AACAGCTGTT (-): 2446983)
Lhx8 (Sequence: TTAATTAA (-): 2431993)
Lhx8 (Sequence: TTAATTAA (-): 2434670)
Lhx8 (Sequence: CTAATTAA (-): 2439024)
Lhx8 (Sequence: TTAATTAA (-): 2447997)
Rhox11 (Sequence: CGCTGTTTA (+): 2426423)
Rhox11 (Sequence: TGGTGTTTT (+): 2430838)
Rhox11 (Sequence: CGGTGTAAA (+): 2435884)
Rhox11 (Sequence: CGCTGTTTA (+): 2449825)
FOXP1 (Sequence: GTAAACA (+): 2434059)
FOXP1 (Sequence: GTAAACA (+): 2439696)
FOXP1 (Sequence: GTAAACA (+): 2443491)
FOXO1 (Sequence: GCTGTTTAT (+): 2426424)
FOXO1 (Sequence: GCTGTTTAT (+): 2449826)
POU5F1 (Sequence: ATGCAAA (+): 2446688)
FOXO3_mmu (Sequence: TGTTTACA (-): 2438680)
Nobox (Sequence: TAATTGCT (+): 2430404)
RHOXF1 (Sequence: AGATCA (-): 2426316)
RHOXF1 (Sequence: GGATCA (-): 2426340)
RHOXF1 (Sequence: GGATCA (-): 2427884)
RHOXF1 (Sequence: AGCTTA (-): 2428062)
RHOXF1 (Sequence: AGCTCA (-): 2428809)
RHOXF1 (Sequence: AGATCA (-): 2429308)
RHOXF1 (Sequence: GGCTCA (-): 2429962)
RHOXF1 (Sequence: GGCTCA (-): 2430028)
RHOXF1 (Sequence: GGCTTA (-): 2430400)
RHOXF1 (Sequence: GGCTCA (-): 2430613)
RHOXF1 (Sequence: GGATCA (-): 2430748)
RHOXF1 (Sequence: AGCTTA (-): 2435364)
RHOXF1 (Sequence: GGCTCA (-): 2435592)
RHOXF1 (Sequence: AGCTCA (-): 2435770)
RHOXF1 (Sequence: AGCTCA (-): 2435916)
RHOXF1 (Sequence: GGCTCA (-): 2436545)
RHOXF1 (Sequence: GGCTCA (-): 2437180)
RHOXF1 (Sequence: AGATCA (-): 2437582)
RHOXF1 (Sequence: AGATCA (-): 2437732)
RHOXF1 (Sequence: AGCTTA (-): 2437783)
RHOXF1 (Sequence: AGATTA (-): 2438130)
RHOXF1 (Sequence: GGCTTA (-): 2438454)
RHOXF1 (Sequence: AGATCA (-): 2439219)
RHOXF1 (Sequence: GGCTTA (-): 2439550)
RHOXF1 (Sequence: AGCTTA (-): 2439750)
RHOXF1 (Sequence: AGCTCA (-): 2441269)
RHOXF1 (Sequence: GGATTA (-): 2441620)
RHOXF1 (Sequence: GGCTCA (-): 2441799)
RHOXF1 (Sequence: GGATTA (-): 2442004)
RHOXF1 (Sequence: GGCTCA (-): 2442847)
RHOXF1 (Sequence: AGCTCA (-): 2443868)
RHOXF1 (Sequence: GGCTCA (-): 2443995)
RHOXF1 (Sequence: AGCTCA (-): 2444185)
RHOXF1 (Sequence: AGCTCA (-): 2445074)
RHOXF1 (Sequence: AGCTTA (-): 2446323)
RHOXF1 (Sequence: GGATCA (-): 2447602)
RHOXF1 (Sequence: AGATTA (-): 2447603)
RHOXF1 (Sequence: AGATCA (-): 2449718)
RHOXF1 (Sequence: GGATCA (-): 2449742)
FOXO3_mmu (Sequence: GCTAAACA (+): 2429507)
FOXO3_mmu (Sequence: TGTAAACA (+): 2434058)
FOXO3_mmu (Sequence: GGTAAACA (+): 2439695)
Sox5 (Sequence: ATTGTT (+): 2428142)
Sox5 (Sequence: ATTGTT (+): 2429618)
Sox5 (Sequence: ATTGTT (+): 2431352)
Sox5 (Sequence: ATTGTT (+): 2438618)
Sox5 (Sequence: ATTGTT (+): 2444439)
Sox5 (Sequence: ATTGTT (+): 2448218)
FOXO1 (Sequence: ATAAACAGC (-): 2435690)
Nobox (Sequence: AGTAATTA (-): 2438794)
Mybl1_1 (Sequence: AACCGTTA (+): 2426599)
Mybl1_1 (Sequence: AACCGTTA (+): 2431029)
POU2F1 (Sequence: ATTTGCATA (-): 2429461)
POU2F1 (Sequence: ATTAAAATA (-): 2434840)
SOX9 (Sequence: TTATTGTT (+): 2428140)
SOX9 (Sequence: CTATTGTT (+): 2429616)
SOX9 (Sequence: TCATTGTT (+): 2438616)
POU5F1 (Sequence: TTTGCAT (-): 2426153)
POU5F1 (Sequence: TTTGCAT (-): 2429462)
POU5F1 (Sequence: TTTGCAT (-): 2447447)
POU5F1 (Sequence: TTTGCAT (-): 2449555)
Mybl1_1 (Sequence: TAACGGTT (-): 2449380)
RHOXF1 (Sequence: TGAGCC (+): 2426204)
RHOXF1 (Sequence: TAAGCT (+): 2426605)
RHOXF1 (Sequence: TGATCT (+): 2426848)
RHOXF1 (Sequence: TGATCC (+): 2427065)
RHOXF1 (Sequence: TGAGCC (+): 2427244)
RHOXF1 (Sequence: TGAGCT (+): 2427624)
RHOXF1 (Sequence: TAAGCC (+): 2428791)
RHOXF1 (Sequence: TGAGCT (+): 2428807)
RHOXF1 (Sequence: TAAGCT (+): 2429160)
RHOXF1 (Sequence: TAATCC (+): 2430159)
RHOXF1 (Sequence: TGAGCT (+): 2430445)
RHOXF1 (Sequence: TGAGCT (+): 2430457)
RHOXF1 (Sequence: TGAGCT (+): 2430624)
RHOXF1 (Sequence: TGATCC (+): 2430684)
RHOXF1 (Sequence: TAAGCC (+): 2432334)
RHOXF1 (Sequence: TAATCT (+): 2433166)
RHOXF1 (Sequence: TAAGCT (+): 2433889)
RHOXF1 (Sequence: TAAGCT (+): 2434098)
RHOXF1 (Sequence: TAAGCT (+): 2436357)
RHOXF1 (Sequence: TGATCT (+): 2436444)
RHOXF1 (Sequence: TAAGCT (+): 2436996)
RHOXF1 (Sequence: TAATCC (+): 2437065)
RHOXF1 (Sequence: TGAGCC (+): 2437410)
RHOXF1 (Sequence: TGAGCT (+): 2438169)
RHOXF1 (Sequence: TGAGCT (+): 2439037)
RHOXF1 (Sequence: TAAGCT (+): 2439046)
RHOXF1 (Sequence: TAAGCC (+): 2439281)
RHOXF1 (Sequence: TAAGCC (+): 2439761)
RHOXF1 (Sequence: TAAGCC (+): 2440075)
RHOXF1 (Sequence: TAATCC (+): 2441590)
RHOXF1 (Sequence: TAATCC (+): 2443438)
RHOXF1 (Sequence: TGATCT (+): 2445251)
RHOXF1 (Sequence: TGAGCC (+): 2445588)
RHOXF1 (Sequence: TGATCC (+): 2445639)
RHOXF1 (Sequence: TAATCC (+): 2447301)
RHOXF1 (Sequence: TAAGCC (+): 2449606)
Rhox11 (Sequence: ATTACACCA (-): 2437233)
Rhox11 (Sequence: TTAACACCA (-): 2437573)
FOXO3_hsa (Sequence: GTAAACAA (+): 2434059)
FOXO3_hsa (Sequence: GTAAACAT (+): 2443491)
RFX4_2 (Sequence: GTAACTAAG (-): 2431718)
Gata4 (Sequence: AGATAAC (-): 2426265)
Gata4 (Sequence: AGATAAG (-): 2428788)
Gata4 (Sequence: AGATAAC (-): 2430863)
Gata4 (Sequence: AGATAAC (-): 2430871)
Gata4 (Sequence: AGATAAC (-): 2431568)
Gata4 (Sequence: AGATAAG (-): 2437916)
Gata4 (Sequence: AGATAAG (-): 2441607)
Gata4 (Sequence: AGATAAG (-): 2443837)
Gata4 (Sequence: AGATAAC (-): 2446979)
Gata4 (Sequence: GTTATCT (+): 2426774)
Gata4 (Sequence: GTTATCT (+): 2436494)
Sox5 (Sequence: AACAAT (-): 2429511)
Sox5 (Sequence: AACAAT (-): 2431572)
Sox5 (Sequence: AACAAT (-): 2432690)
Sox5 (Sequence: AACAAT (-): 2433468)
Sox5 (Sequence: AACAAT (-): 2434062)
Sox5 (Sequence: AACAAT (-): 2446693)
Sox5 (Sequence: AACAAT (-): 2447013)
Sox5 (Sequence: AACAAT (-): 2447553)