Predicted piRNA cluster no. 162     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
12794720
12801845
Gene Set
RepeatMasker
Mapped
Reads
19.48
plus strand
minus strand
19.48
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. POLINTON-1_Dsub: 12794720-12811673 (-), Divergence to consensus: 0.1%

Transcription Factor Binding Sites
RFX4_2 (Sequence: CATGGATAC (+): 12800337)
FOXP1 (Sequence: TGTTTAC (-): 12798198)
Lhx8 (Sequence: TTAATTAA (-): 12800092)
Lhx8 (Sequence: TTAATTAA (-): 12800386)
Rhox11 (Sequence: CGCTGTAAA (+): 12797666)
Rhox11 (Sequence: TGCTGTTTT (+): 12801667)
FOXO1 (Sequence: GCTGTTTTC (+): 12801314)
FOXO1 (Sequence: GCTGTTTTC (+): 12801668)
POU5F1 (Sequence: ATGCAAA (+): 12797521)
FOXO3_mmu (Sequence: TGTTTACA (-): 12798198)
FOXO3_mmu (Sequence: TGTTTTCA (-): 12801316)
FOXO3_mmu (Sequence: TGTTTTCA (-): 12801547)
POU2F1 (Sequence: TATGTAAAT (+): 12795501)
POU2F1 (Sequence: TATGCAAAT (+): 12797520)
POU2F1 (Sequence: TATTTAAAT (+): 12799540)
POU2F1 (Sequence: TATTTTAAT (+): 12800963)
Nobox (Sequence: TAATTGCT (+): 12799257)
RHOXF1 (Sequence: GGATTA (-): 12795111)
RHOXF1 (Sequence: AGCTCA (-): 12795561)
RHOXF1 (Sequence: AGATCA (-): 12796248)
RHOXF1 (Sequence: GGCTCA (-): 12798410)
RHOXF1 (Sequence: AGCTTA (-): 12799015)
RHOXF1 (Sequence: AGATTA (-): 12799275)
RHOXF1 (Sequence: GGCTTA (-): 12799952)
RHOXF1 (Sequence: GGATTA (-): 12800476)
RHOXF1 (Sequence: AGATTA (-): 12800591)
RHOXF1 (Sequence: AGATTA (-): 12800623)
RHOXF1 (Sequence: GGATTA (-): 12801051)
RHOXF1 (Sequence: GGATCA (-): 12801263)
RHOXF1 (Sequence: AGCTCA (-): 12801557)
FOXO3_mmu (Sequence: GGAAAACA (+): 12799813)
Sox5 (Sequence: ATTGTT (+): 12798196)
Sox5 (Sequence: ATTGTT (+): 12798940)
FOXO1 (Sequence: AAAAACAAG (-): 12799066)
FOXO1 (Sequence: GAAAACAAG (-): 12799792)
POU2F1 (Sequence: ATTTGAATA (-): 12797624)
POU2F1 (Sequence: ATTTGCATA (-): 12797774)
POU2F1 (Sequence: ATTAGCATA (-): 12797985)
POU5F1 (Sequence: TTTGCAT (-): 12797775)
RHOXF1 (Sequence: TGATCT (+): 12795310)
RHOXF1 (Sequence: TAATCC (+): 12795757)
RHOXF1 (Sequence: TGAGCT (+): 12797636)
RHOXF1 (Sequence: TGATCC (+): 12798383)
RHOXF1 (Sequence: TAATCT (+): 12798509)
RHOXF1 (Sequence: TGAGCC (+): 12798711)
RHOXF1 (Sequence: TAAGCC (+): 12798894)
RHOXF1 (Sequence: TGATCC (+): 12799452)
RHOXF1 (Sequence: TGATCT (+): 12799968)
RHOXF1 (Sequence: TGATCC (+): 12801035)
RHOXF1 (Sequence: TGATCC (+): 12801115)
RHOXF1 (Sequence: TAAGCT (+): 12801311)
RHOXF1 (Sequence: TAAGCT (+): 12801555)
Gata4 (Sequence: AGATAAC (-): 12796810)
Gata4 (Sequence: AGATAAG (-): 12797837)
Gata4 (Sequence: AGATAAG (-): 12800735)
FOXO3_hsa (Sequence: TTGTTTAC (-): 12798197)
Gata4 (Sequence: CTTATCT (+): 12799839)
Sox5 (Sequence: AACAAT (-): 12799600)
Sox5 (Sequence: AACAAT (-): 12799817)