Predicted piRNA cluster no. 156     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
6825472
6832387
Gene Set
RepeatMasker
Mapped
Reads
192.43
plus strand
minus strand
192.43
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation
1. unknown (unknowndsub_v4_00003741) Tr:4: 6826524-6827029 (-)
2. unknown (unknowndsub_v4_00003741) Tr:4: 6827253-6827311 (-)
3. unknown (unknowndsub_v4_00003741) Tr:4: 6828193-6828887 (-)

RepeatMasker Annotation
1. TE-630_Dsub: 6825519-6825583 (-), Divergence to consensus: 20.7%
2. TE-501_Dsub: 6826213-6826340 (-), Divergence to consensus: 4.8%
3. TE-501_Dsub: 6827697-6827880 (+), Divergence to consensus: 24.3%
4. TE-536_Dsub: 6827703-6827941 (-), Divergence to consensus: 35.4%
5. TE-501_Dsub: 6827979-6829494 (+), Divergence to consensus: 10.9%
6. TE-124_Dsub: 6829695-6829742 (+), Divergence to consensus: 12.8%
7. TE-572_Dsub: 6829869-6829953 (-), Divergence to consensus: 23.6%
8. TE-633_Dsub: 6829896-6830331 (+), Divergence to consensus: 7.2%
9. TE-619_Dsub: 6830257-6831169 (-), Divergence to consensus: 1.2%
10. TE-619_Dsub: 6830371-6831586 (+), Divergence to consensus: 5.6%
11. TE-638_Dsub: 6831587-6832411 (-), Divergence to consensus: 2.5%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATAA (-): 6825959)
SOX9 (Sequence: AACAATAA (-): 6826411)
FOXO1 (Sequence: GTTGTTTTC (+): 6831643)
FOXO1 (Sequence: GTTGTTTTT (+): 6831767)
POU5F1 (Sequence: ATGCAAA (+): 6827889)
FOXO3_mmu (Sequence: TGTTTTCA (-): 6827605)
RHOXF1 (Sequence: AGATTA (-): 6827475)
RHOXF1 (Sequence: AGCTCA (-): 6828143)
RHOXF1 (Sequence: GGCTCA (-): 6828155)
RHOXF1 (Sequence: AGATCA (-): 6828935)
RHOXF1 (Sequence: AGCTCA (-): 6829649)
RHOXF1 (Sequence: GGCTCA (-): 6829770)
RHOXF1 (Sequence: AGATTA (-): 6830284)
RHOXF1 (Sequence: GGATCA (-): 6830308)
RHOXF1 (Sequence: AGATCA (-): 6830702)
RHOXF1 (Sequence: AGCTCA (-): 6831800)
RHOXF1 (Sequence: GGATCA (-): 6831863)
RHOXF1 (Sequence: GGATCA (-): 6831960)
FOXO3_mmu (Sequence: GCAAAACA (+): 6828580)
Sox5 (Sequence: ATTGTT (+): 6826074)
Sox5 (Sequence: ATTGTT (+): 6829464)
Sox5 (Sequence: ATTGTT (+): 6831197)
Sox5 (Sequence: ATTGTT (+): 6831908)
FOXO1 (Sequence: GAAAACAGG (-): 6831423)
Nobox (Sequence: AGCAATTA (-): 6830889)
POU2F1 (Sequence: ATTTACATA (-): 6827722)
POU2F1 (Sequence: ATTTACATA (-): 6830405)
POU2F1 (Sequence: ATTTACATA (-): 6830415)
POU2F1 (Sequence: ATTTGAATA (-): 6831900)
SOX9 (Sequence: TTATTGTT (+): 6831195)
Mybl1_1 (Sequence: TAACGGTT (-): 6829959)
RHOXF1 (Sequence: TGATCT (+): 6825870)
RHOXF1 (Sequence: TGATCT (+): 6826117)
RHOXF1 (Sequence: TGATCT (+): 6827898)
RHOXF1 (Sequence: TAAGCT (+): 6828141)
RHOXF1 (Sequence: TGATCT (+): 6828251)
RHOXF1 (Sequence: TAAGCC (+): 6828462)
RHOXF1 (Sequence: TGATCC (+): 6828787)
RHOXF1 (Sequence: TGAGCC (+): 6830046)
RHOXF1 (Sequence: TGATCT (+): 6830339)
RHOXF1 (Sequence: TGAGCT (+): 6830527)
RHOXF1 (Sequence: TAATCC (+): 6831008)
RHOXF1 (Sequence: TAATCT (+): 6831782)
RHOXF1 (Sequence: TAATCC (+): 6831922)
RFX4_2 (Sequence: GTATCTATG (-): 6828492)
Gata4 (Sequence: AGATAAC (-): 6829562)
Gata4 (Sequence: AGATAAC (-): 6830233)
Sox5 (Sequence: AACAAT (-): 6825844)
Sox5 (Sequence: AACAAT (-): 6825952)
Sox5 (Sequence: AACAAT (-): 6825959)
Sox5 (Sequence: AACAAT (-): 6826238)
Sox5 (Sequence: AACAAT (-): 6826411)
Sox5 (Sequence: AACAAT (-): 6827668)