Predicted piRNA cluster no. 132     previous   next

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Show proTRAC cluster info

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
720001
726694
Gene Set
RepeatMasker
Mapped
Reads
4.09
plus strand
minus strand
4.09
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. TE-622_Dsub: 719737-720140 (+), Divergence to consensus: 26.8%
2. TE-614_Dsub: 720139-720223 (-), Divergence to consensus: 13.9%
3. TE-322_Dsub: 720378-720498 (-), Divergence to consensus: 26.8%
4. TE-622_Dsub: 720499-720571 (+), Divergence to consensus: 12.5%
5. BILBO-1_Dsub: 720859-726393 (-), Divergence to consensus: 2.1%
6. TE-561_Dsub: 726500-726875 (+), Divergence to consensus: 30.6%

Transcription Factor Binding Sites
FOXP1 (Sequence: TGTTTAC (-): 720726)
FOXP1 (Sequence: TGTTTAC (-): 723274)
FIGLA (Sequence: ACCAGGTGGT (-): 721835)
FOXP1 (Sequence: GTAAACA (+): 722451)
FOXO1 (Sequence: GTTGTTTAC (+): 720724)
FOXO1 (Sequence: GCTGTTTAC (+): 723272)
FOXO3_mmu (Sequence: TGTTTAGA (-): 723675)
RHOXF1 (Sequence: GGATCA (-): 720113)
RHOXF1 (Sequence: AGCTCA (-): 721272)
RHOXF1 (Sequence: AGCTCA (-): 721461)
RHOXF1 (Sequence: AGCTCA (-): 721672)
RHOXF1 (Sequence: AGCTTA (-): 721744)
RHOXF1 (Sequence: GGATTA (-): 722478)
RHOXF1 (Sequence: AGATTA (-): 722917)
RHOXF1 (Sequence: AGCTTA (-): 723286)
RHOXF1 (Sequence: AGCTTA (-): 723582)
RHOXF1 (Sequence: GGATTA (-): 724466)
RHOXF1 (Sequence: GGATCA (-): 724872)
RHOXF1 (Sequence: GGATCA (-): 726383)
FOXO3_mmu (Sequence: TGTAAACA (+): 722450)
Sox5 (Sequence: ATTGTT (+): 720297)
Sox5 (Sequence: ATTGTT (+): 720824)
Sox5 (Sequence: ATTGTT (+): 721440)
FOXO1 (Sequence: AAAAACAAG (-): 720253)
FOXO1 (Sequence: GTAAACAAC (-): 722451)
POU2F1 (Sequence: ATTTAAATA (-): 720620)
POU5F1 (Sequence: TTTGCAT (-): 721194)
RHOXF1 (Sequence: TGAGCT (+): 720356)
RHOXF1 (Sequence: TGAGCT (+): 720366)
RHOXF1 (Sequence: TAATCC (+): 720399)
RHOXF1 (Sequence: TGAGCT (+): 721241)
RHOXF1 (Sequence: TGAGCT (+): 721384)
RHOXF1 (Sequence: TAAGCC (+): 721533)
RHOXF1 (Sequence: TGATCC (+): 721722)
RHOXF1 (Sequence: TGAGCC (+): 721799)
RHOXF1 (Sequence: TGAGCT (+): 722344)
RHOXF1 (Sequence: TGATCT (+): 722766)
RHOXF1 (Sequence: TGAGCC (+): 723225)
RHOXF1 (Sequence: TGAGCC (+): 724249)
RHOXF1 (Sequence: TAATCC (+): 724428)
RHOXF1 (Sequence: TGAGCT (+): 724824)
RHOXF1 (Sequence: TGAGCT (+): 725983)
RHOXF1 (Sequence: TGAGCT (+): 726136)
RHOXF1 (Sequence: TGAGCC (+): 726361)
Rhox11 (Sequence: AATACAGCA (-): 720481)
FOXO3_hsa (Sequence: GTAAACAA (+): 722451)
Gata4 (Sequence: AGATAAC (-): 723996)
FOXO3_hsa (Sequence: TTGTTTAC (-): 720725)