Predicted piRNA cluster no. 7     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
cDot_v4 
1138126
1145022
Gene Set
RepeatMasker
Mapped
Reads
11.43
plus strand
minus strand
11.43
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation
1. unknown (unknowndsub_v4_00013113) Tr:4: 1144952-1145051 (-)

RepeatMasker Annotation
1. TE-607_Dsub: 1138037-1138191 (-), Divergence to consensus: 19.5%
2. TE-581_Dsub: 1138181-1138568 (-), Divergence to consensus: 16.7%
3. BILBO-1_Dsub: 1138628-1138743 (-), Divergence to consensus: 26.7%
4. BILBO-1_Dsub: 1138725-1138816 (-), Divergence to consensus: 40.2%
5. TE-457_Dsub: 1138816-1138871 (+), Divergence to consensus: 16.1%
6. TE-572_Dsub: 1138974-1139022 (-), Divergence to consensus: 19.6%
7. TE-597_Dsub: 1138985-1139033 (+), Divergence to consensus: 14%
8. TE-566_Dsub: 1139014-1139311 (-), Divergence to consensus: 27.7%
9. TE-560_Dsub: 1139119-1139335 (+), Divergence to consensus: 30.8%
10. TE-572_Dsub: 1139312-1139447 (-), Divergence to consensus: 34.4%
11. TE-606_Dsub: 1139447-1139531 (-), Divergence to consensus: 25.3%
12. BILBO-1_Dsub: 1139530-1142610 (-), Divergence to consensus: 2.8%
13. TE-452_Dsub: 1142608-1142707 (-), Divergence to consensus: 32%
14. TE-613_Dsub: 1142708-1142879 (+), Divergence to consensus: 28.3%
15. TE-452_Dsub: 1142880-1142901 (-), Divergence to consensus: 32%
16. TE-588_Dsub: 1142918-1143312 (-), Divergence to consensus: 10.2%
17. TE-613_Dsub: 1143180-1144199 (+), Divergence to consensus: 5.4%
18. TE-588_Dsub: 1144203-1144277 (+), Divergence to consensus: 13.4%
19. TE-622_Dsub: 1144377-1144643 (-), Divergence to consensus: 23.7%
20. TE-622_Dsub: 1144562-1144672 (+), Divergence to consensus: 21%

Transcription Factor Binding Sites
FOXP1 (Sequence: TGTTTAC (-): 1141927)
FIGLA (Sequence: ACCAGGTGGT (-): 1140488)
FOXP1 (Sequence: GTAAACA (+): 1141104)
FOXO1 (Sequence: GCTGTTTAC (+): 1141925)
POU5F1 (Sequence: ATGCAAA (+): 1139421)
FOXO3_mmu (Sequence: TGTTTAGA (-): 1142328)
RHOXF1 (Sequence: GGATCA (-): 1138182)
RHOXF1 (Sequence: AGCTTA (-): 1138244)
RHOXF1 (Sequence: GGATCA (-): 1139019)
RHOXF1 (Sequence: AGCTTA (-): 1139389)
RHOXF1 (Sequence: AGCTCA (-): 1139944)
RHOXF1 (Sequence: AGCTCA (-): 1140133)
RHOXF1 (Sequence: AGCTCA (-): 1140344)
RHOXF1 (Sequence: GGATTA (-): 1141131)
RHOXF1 (Sequence: AGATTA (-): 1141570)
RHOXF1 (Sequence: AGCTTA (-): 1141939)
RHOXF1 (Sequence: AGCTTA (-): 1142235)
RHOXF1 (Sequence: AGCTTA (-): 1143414)
RHOXF1 (Sequence: GGATCA (-): 1143944)
RHOXF1 (Sequence: GGATCA (-): 1144035)
RHOXF1 (Sequence: AGATTA (-): 1144705)
RHOXF1 (Sequence: AGCTTA (-): 1144884)
FOXO3_mmu (Sequence: GCAAAACA (+): 1139459)
FOXO3_mmu (Sequence: TGTAAACA (+): 1141103)
Sox5 (Sequence: ATTGTT (+): 1140112)
Sox5 (Sequence: ATTGTT (+): 1144488)
FOXO1 (Sequence: AAAAACAGC (-): 1139471)
FOXO1 (Sequence: GTAAACAAC (-): 1141104)
FOXO1 (Sequence: AAAAACAAC (-): 1143041)
Nobox (Sequence: GGTAATTA (-): 1144947)
POU5F1 (Sequence: TTTGCAT (-): 1139866)
Mybl1_1 (Sequence: TAACGGTT (-): 1144551)
RHOXF1 (Sequence: TAAGCC (+): 1138192)
RHOXF1 (Sequence: TGATCT (+): 1138535)
RHOXF1 (Sequence: TGAGCC (+): 1138784)
RHOXF1 (Sequence: TGAGCT (+): 1139913)
RHOXF1 (Sequence: TGAGCT (+): 1140056)
RHOXF1 (Sequence: TAAGCC (+): 1140205)
RHOXF1 (Sequence: TGATCC (+): 1140394)
RHOXF1 (Sequence: TGAGCC (+): 1140452)
RHOXF1 (Sequence: TGAGCT (+): 1140997)
RHOXF1 (Sequence: TGATCT (+): 1141419)
RHOXF1 (Sequence: TGAGCC (+): 1141878)
RHOXF1 (Sequence: TGATCC (+): 1142617)
RHOXF1 (Sequence: TAATCT (+): 1143246)
RHOXF1 (Sequence: TAATCT (+): 1143441)
RHOXF1 (Sequence: TGATCC (+): 1143688)
FOXO3_hsa (Sequence: GTAAACAA (+): 1141104)
Gata4 (Sequence: AGATAAC (-): 1138405)
Gata4 (Sequence: AGATAAC (-): 1139183)
Gata4 (Sequence: CTTATCT (+): 1144363)
Sox5 (Sequence: AACAAT (-): 1143222)
Sox5 (Sequence: AACAAT (-): 1144388)