Predicted piRNA cluster no. 157     previous   next

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Show proTRAC cluster info

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
7281122
7287762
Gene Set
RepeatMasker
Mapped
Reads
101.81
plus strand
minus strand
101.81
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. TE-192_Dsub: 7281318-7281426 (-), Divergence to consensus: 25.2%
2. TE-595_Dsub: 7282847-7283301 (+), Divergence to consensus: 0%
3. BEL-3_Dsub: 7283302-7287305 (+), Divergence to consensus: 0%
4. TE-595_Dsub: 7287306-7287760 (+), Divergence to consensus: 0%

Transcription Factor Binding Sites
FOXP1 (Sequence: TGTTTAC (-): 7282580)
FOXP1 (Sequence: TGTTTAC (-): 7282893)
FOXP1 (Sequence: TGTTTAC (-): 7287352)
FOXO1 (Sequence: CTTGTTTAC (+): 7282891)
FOXO1 (Sequence: CTTGTTTAC (+): 7287350)
POU5F1 (Sequence: ATGCAAA (+): 7286275)
FOXO3_mmu (Sequence: TGTTTACA (-): 7282893)
FOXO3_mmu (Sequence: TGTTTACA (-): 7287352)
Nobox (Sequence: TAATTACT (+): 7282870)
Nobox (Sequence: TAATTGCT (+): 7285018)
Nobox (Sequence: TAATTGGT (+): 7286910)
Nobox (Sequence: TAATTACT (+): 7287329)
RHOXF1 (Sequence: AGATTA (-): 7281810)
RHOXF1 (Sequence: GGCTCA (-): 7282678)
RHOXF1 (Sequence: GGCTCA (-): 7282687)
RHOXF1 (Sequence: GGATTA (-): 7283934)
RHOXF1 (Sequence: AGCTTA (-): 7284098)
RHOXF1 (Sequence: AGCTCA (-): 7284449)
RHOXF1 (Sequence: GGATCA (-): 7284811)
RHOXF1 (Sequence: AGATCA (-): 7284832)
RHOXF1 (Sequence: GGATCA (-): 7285316)
RHOXF1 (Sequence: AGATCA (-): 7285503)
RHOXF1 (Sequence: GGATCA (-): 7285707)
RHOXF1 (Sequence: GGATCA (-): 7286413)
RHOXF1 (Sequence: GGATTA (-): 7286424)
FOXO3_mmu (Sequence: GGAAAACA (+): 7286026)
RFX4_1 (Sequence: GTTGCCATG (-): 7285181)
Sox5 (Sequence: ATTGTT (+): 7281657)
FOXO1 (Sequence: AAAAACAAC (-): 7285268)
Nobox (Sequence: GCTAATTA (-): 7284470)
SOX9 (Sequence: CCATTGTT (+): 7281655)
POU5F1 (Sequence: TTTGCAT (-): 7282303)
POU5F1 (Sequence: TTTGCAT (-): 7285099)
RHOXF1 (Sequence: TAAGCC (+): 7281173)
RHOXF1 (Sequence: TAATCT (+): 7281274)
RHOXF1 (Sequence: TAAGCT (+): 7281406)
RHOXF1 (Sequence: TGAGCT (+): 7281955)
RHOXF1 (Sequence: TGAGCC (+): 7282271)
RHOXF1 (Sequence: TGAGCT (+): 7282361)
RHOXF1 (Sequence: TGAGCT (+): 7282434)
RHOXF1 (Sequence: TGAGCC (+): 7282614)
RHOXF1 (Sequence: TGAGCT (+): 7283704)
RHOXF1 (Sequence: TGATCT (+): 7284034)
RHOXF1 (Sequence: TGAGCC (+): 7286938)
Gata4 (Sequence: AGATAAG (-): 7282670)
FOXO3_hsa (Sequence: TTGTTTAC (-): 7282579)
FOXO3_hsa (Sequence: TTGTTTAC (-): 7282892)
FOXO3_hsa (Sequence: TTGTTTAC (-): 7287351)