Predicted piRNA cluster no. 150     previous   next

Show proTRAC run info

Show proTRAC cluster info

Hide read coverage
1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
3044051
3053975
Gene Set
RepeatMasker
Mapped
Reads
13.73
plus strand
minus strand
13.73
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. GYPSY-20_Dsub: 3044040-3044340 (-), Divergence to consensus: 0.3%
2. TE-576_Dsub: 3044337-3045964 (-), Divergence to consensus: 0%
3. GYPSY-20_Dsub: 3045965-3046103 (-), Divergence to consensus: 0.7%
4. TE-621_Dsub: 3046104-3052840 (-), Divergence to consensus: 0.4%
5. TE-576_Dsub: 3052804-3052840 (-), Divergence to consensus: 0%
6. GYPSY-20_Dsub: 3052841-3053276 (-), Divergence to consensus: 0.2%
7. TE-626_Dsub: 3053277-3054253 (-), Divergence to consensus: 19%

Transcription Factor Binding Sites
FOXP1 (Sequence: TGTTTAC (-): 3047810)
FOXP1 (Sequence: TGTTTAC (-): 3049723)
FIGLA (Sequence: TACAGGTGTA (-): 3047194)
Lhx8 (Sequence: TTAATTAA (-): 3046216)
Lhx8 (Sequence: TTAATTAA (-): 3049380)
Rhox11 (Sequence: TGCTGTTAT (+): 3050205)
Rhox11 (Sequence: CGCTGTTAT (+): 3050755)
FOXP1 (Sequence: GTAAACA (+): 3047384)
POU5F1 (Sequence: ATGCAAA (+): 3053361)
POU5F1 (Sequence: ATGCAAA (+): 3053840)
FOXO3_mmu (Sequence: TGTTTTCC (-): 3048047)
FOXO3_mmu (Sequence: TGTTTTCC (-): 3049920)
FOXO3_mmu (Sequence: TGTTTTCA (-): 3053542)
Nobox (Sequence: TAATTGCC (+): 3048078)
Nobox (Sequence: TAATTGGT (+): 3049385)
Nobox (Sequence: TAATTACC (+): 3050138)
RHOXF1 (Sequence: GGATCA (-): 3044271)
RHOXF1 (Sequence: AGCTTA (-): 3044637)
RHOXF1 (Sequence: AGATTA (-): 3047109)
RHOXF1 (Sequence: AGATCA (-): 3049650)
RHOXF1 (Sequence: AGCTTA (-): 3051730)
RHOXF1 (Sequence: GGCTTA (-): 3051931)
RHOXF1 (Sequence: GGCTCA (-): 3052547)
RHOXF1 (Sequence: GGATTA (-): 3052732)
RHOXF1 (Sequence: GGATCA (-): 3053072)
FOXO3_mmu (Sequence: TGTAAACA (+): 3047383)
FOXO3_mmu (Sequence: GGAAAACA (+): 3053744)
Sox5 (Sequence: ATTGTT (+): 3045048)
Sox5 (Sequence: ATTGTT (+): 3046430)
Sox5 (Sequence: ATTGTT (+): 3047210)
Sox5 (Sequence: ATTGTT (+): 3047843)
Sox5 (Sequence: ATTGTT (+): 3049562)
Sox5 (Sequence: ATTGTT (+): 3049610)
Sox5 (Sequence: ATTGTT (+): 3049937)
Sox5 (Sequence: ATTGTT (+): 3050059)
Sox5 (Sequence: ATTGTT (+): 3050173)
Sox5 (Sequence: ATTGTT (+): 3050645)
Sox5 (Sequence: ATTGTT (+): 3053879)
FOXO1 (Sequence: GAAAACAAC (-): 3053745)
POU2F1 (Sequence: ATTTACATA (-): 3046941)
POU2F1 (Sequence: ATTTGCATA (-): 3053588)
SOX9 (Sequence: TTATTGTT (+): 3047208)
SOX9 (Sequence: TTATTGTT (+): 3050057)
SOX9 (Sequence: TTATTGTT (+): 3050643)
POU5F1 (Sequence: TTTGCAT (-): 3052170)
POU5F1 (Sequence: TTTGCAT (-): 3053589)
RFX4_1 (Sequence: CTTGGCAAC (+): 3053791)
RHOXF1 (Sequence: TGATCT (+): 3044112)
RHOXF1 (Sequence: TGATCT (+): 3045159)
RHOXF1 (Sequence: TAAGCT (+): 3045665)
RHOXF1 (Sequence: TAAGCT (+): 3046622)
RHOXF1 (Sequence: TAATCT (+): 3046658)
RHOXF1 (Sequence: TGATCT (+): 3047143)
RHOXF1 (Sequence: TGAGCT (+): 3047983)
RHOXF1 (Sequence: TGATCT (+): 3048145)
RHOXF1 (Sequence: TAATCT (+): 3048358)
RHOXF1 (Sequence: TGAGCC (+): 3048781)
RHOXF1 (Sequence: TGATCC (+): 3048893)
RHOXF1 (Sequence: TGAGCT (+): 3049288)
RHOXF1 (Sequence: TGAGCT (+): 3049293)
RHOXF1 (Sequence: TGATCT (+): 3049538)
RHOXF1 (Sequence: TAAGCT (+): 3050273)
RHOXF1 (Sequence: TGATCC (+): 3050677)
RHOXF1 (Sequence: TAATCT (+): 3050685)
RHOXF1 (Sequence: TGATCT (+): 3050915)
RHOXF1 (Sequence: TGATCT (+): 3052913)
RHOXF1 (Sequence: TAAGCC (+): 3053464)
RHOXF1 (Sequence: TAATCT (+): 3053867)
RHOXF1 (Sequence: TAAGCT (+): 3053909)
RFX4_2 (Sequence: GTAACCACG (-): 3050218)
Gata4 (Sequence: AGATAAC (-): 3053855)
FOXO3_hsa (Sequence: TTGTTTAC (-): 3049722)
Gata4 (Sequence: CTTATCT (+): 3046525)
Sox5 (Sequence: AACAAT (-): 3051771)