Predicted piRNA cluster no. 134     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
1209047
1223023
Gene Set
RepeatMasker
Mapped
Reads
218.99
plus strand
minus strand
218.99
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. TE-392_Dsub: 1207627-1209223 (+), Divergence to consensus: 9.1%
2. TE-601_Dsub: 1209123-1209242 (-), Divergence to consensus: 40%
3. TE-581_Dsub: 1209227-1210016 (-), Divergence to consensus: 11.1%
4. TE-586_Dsub: 1210017-1210142 (+), Divergence to consensus: 7.9%
5. TE-581_Dsub: 1210143-1210159 (-), Divergence to consensus: 11.1%
6. TE-614_Dsub: 1210690-1210795 (-), Divergence to consensus: 32%
7. TE-603_Dsub: 1210796-1210834 (+), Divergence to consensus: 30.9%
8. TE-577_Dsub: 1211137-1211149 (+), Divergence to consensus: 13.5%
9. TE-185_Dsub: 1211150-1211242 (-), Divergence to consensus: 14.2%
10. TE-577_Dsub: 1211243-1211866 (+), Divergence to consensus: 13.5%
11. TE-358_Dsub: 1211724-1211899 (-), Divergence to consensus: 34.8%
12. TE-185_Dsub: 1212686-1212761 (-), Divergence to consensus: 11.9%
13. TE-267_Dsub: 1213457-1213615 (-), Divergence to consensus: 34.7%
14. TE-494_Dsub: 1213560-1214342 (+), Divergence to consensus: 12.2%
15. TE-620_Dsub: 1214360-1214605 (-), Divergence to consensus: 10.7%
16. TE-494_Dsub: 1214606-1214814 (+), Divergence to consensus: 7.7%
17. TE-267_Dsub: 1214690-1214901 (-), Divergence to consensus: 32.6%
18. CR1-3_Dsub: 1215167-1215999 (+), Divergence to consensus: 15.5%
19. CR1-3_Dsub: 1216037-1216067 (+), Divergence to consensus: 12.9%
20. CR1-2_Dsub: 1216057-1216656 (-), Divergence to consensus: 5.2%
21. TE-212_Dsub: 1216638-1216737 (-), Divergence to consensus: 20.1%
22. TE-556_Dsub: 1216652-1217236 (+), Divergence to consensus: 11.8%
23. TE-8_Dsub: 1217237-1217437 (-), Divergence to consensus: 32.7%
24. CR1-2_Dsub: 1217410-1218148 (-), Divergence to consensus: 8.1%
25. TE-556_Dsub: 1217438-1217450 (+), Divergence to consensus: 11.8%
26. TE-640_Dsub: 1218160-1219468 (+), Divergence to consensus: 2.4%
27. TE-640_Dsub: 1219493-1219571 (-), Divergence to consensus: 7.6%
28. TE-588_Dsub: 1219506-1219801 (+), Divergence to consensus: 5.4%
29. TE-613_Dsub: 1219607-1219846 (-), Divergence to consensus: 14.7%
30. TE-640_Dsub: 1219842-1220261 (-), Divergence to consensus: 16%
31. TE-281_Dsub: 1220001-1220382 (+), Divergence to consensus: 48.5%
32. TABOR-1_Dsub: 1220262-1220401 (-), Divergence to consensus: 13.1%
33. TE-581_Dsub: 1220402-1220418 (-), Divergence to consensus: 17.4%
34. TE-581_Dsub: 1220998-1221800 (+), Divergence to consensus: 15%
35. TE-392_Dsub: 1221801-1221858 (-), Divergence to consensus: 12.5%
36. TE-581_Dsub: 1221859-1221869 (+), Divergence to consensus: 15%
37. TE-581_Dsub: 1222646-1223759 (+), Divergence to consensus: 23.8%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATAA (-): 1212147)
SOX9 (Sequence: AACAATGA (-): 1218268)
FOXP1 (Sequence: TGTTTAC (-): 1212405)
FIGLA (Sequence: AACAGCTGTT (-): 1213543)
Lhx8 (Sequence: CTAATTAA (-): 1212592)
Lhx8 (Sequence: CTAATTAG (-): 1213044)
Rhox11 (Sequence: TGCTGTTAT (+): 1214501)
Rhox11 (Sequence: TGCTGTATT (+): 1220096)
FOXO1 (Sequence: GCTGTTTTT (+): 1210847)
FOXO1 (Sequence: CTTGTTTTT (+): 1211873)
FOXO1 (Sequence: GTTGTTTAT (+): 1215125)
FOXO1 (Sequence: CTTGTTTTT (+): 1220253)
POU5F1 (Sequence: ATGCAAA (+): 1221585)
FOXO3_mmu (Sequence: TGTTTACA (-): 1212405)
Nobox (Sequence: TAATTAGT (+): 1213045)
Nobox (Sequence: TAATTACT (+): 1218136)
Nobox (Sequence: TAATTAGT (+): 1219129)
RHOXF1 (Sequence: AGATTA (-): 1209716)
RHOXF1 (Sequence: GGATCA (-): 1209739)
RHOXF1 (Sequence: AGCTTA (-): 1209802)
RHOXF1 (Sequence: AGCTTA (-): 1210766)
RHOXF1 (Sequence: AGCTTA (-): 1210896)
RHOXF1 (Sequence: AGATCA (-): 1211542)
RHOXF1 (Sequence: AGCTTA (-): 1211610)
RHOXF1 (Sequence: AGCTTA (-): 1213245)
RHOXF1 (Sequence: AGATTA (-): 1214576)
RHOXF1 (Sequence: AGCTTA (-): 1214619)
RHOXF1 (Sequence: GGCTTA (-): 1214892)
RHOXF1 (Sequence: AGATCA (-): 1217045)
RHOXF1 (Sequence: GGATCA (-): 1217069)
RHOXF1 (Sequence: AGCTTA (-): 1217117)
RHOXF1 (Sequence: AGCTCA (-): 1217973)
RHOXF1 (Sequence: AGATCA (-): 1218080)
RHOXF1 (Sequence: GGATTA (-): 1218654)
RHOXF1 (Sequence: AGATTA (-): 1218790)
RHOXF1 (Sequence: GGATCA (-): 1218902)
RHOXF1 (Sequence: AGATTA (-): 1219484)
RHOXF1 (Sequence: GGATCA (-): 1220172)
RHOXF1 (Sequence: GGATCA (-): 1220182)
RHOXF1 (Sequence: GGCTCA (-): 1221535)
RHOXF1 (Sequence: GGCTCA (-): 1221698)
RHOXF1 (Sequence: AGCTCA (-): 1222346)
FOXO3_mmu (Sequence: TGAAAACA (+): 1222122)
Sox5 (Sequence: ATTGTT (+): 1210867)
Sox5 (Sequence: ATTGTT (+): 1211938)
Sox5 (Sequence: ATTGTT (+): 1212034)
Sox5 (Sequence: ATTGTT (+): 1217654)
Sox5 (Sequence: ATTGTT (+): 1217769)
Sox5 (Sequence: ATTGTT (+): 1218158)
Sox5 (Sequence: ATTGTT (+): 1222049)
FOXO1 (Sequence: AAAAACAAC (-): 1210561)
FOXO1 (Sequence: AAAAACAGC (-): 1210890)
FOXO1 (Sequence: AAAAACAAC (-): 1211921)
FOXO1 (Sequence: AAAAACAAC (-): 1222105)
Mybl1_1 (Sequence: AACCGTTA (+): 1221783)
POU2F1 (Sequence: ATTTGCATA (-): 1212579)
POU2F1 (Sequence: ATTAAAATA (-): 1212595)
POU2F1 (Sequence: ATTAAAATA (-): 1219486)
POU2F1 (Sequence: ATTTAAATA (-): 1219828)
POU2F1 (Sequence: ATTTGAATA (-): 1222480)
SOX9 (Sequence: CCATTGTT (+): 1212032)
POU5F1 (Sequence: TTTGCAT (-): 1210854)
POU5F1 (Sequence: TTTGCAT (-): 1211379)
POU5F1 (Sequence: TTTGCAT (-): 1212580)
POU5F1 (Sequence: TTTGCAT (-): 1212804)
POU5F1 (Sequence: TTTGCAT (-): 1220005)
Mybl1_1 (Sequence: TAACGGTT (-): 1209382)
Mybl1_1 (Sequence: TAACGGTT (-): 1211208)
Mybl1_1 (Sequence: TAACGGTT (-): 1216704)
RFX4_1 (Sequence: CTTGGCAAC (+): 1215228)
RHOXF1 (Sequence: TGAGCC (+): 1209604)
RHOXF1 (Sequence: TGATCT (+): 1211018)
RHOXF1 (Sequence: TGAGCC (+): 1211430)
RHOXF1 (Sequence: TAAGCT (+): 1212290)
RHOXF1 (Sequence: TAATCC (+): 1212294)
RHOXF1 (Sequence: TAAGCT (+): 1212473)
RHOXF1 (Sequence: TAAGCC (+): 1212535)
RHOXF1 (Sequence: TAATCC (+): 1213106)
RHOXF1 (Sequence: TAAGCT (+): 1214299)
RHOXF1 (Sequence: TAAGCT (+): 1214617)
RHOXF1 (Sequence: TAAGCC (+): 1215622)
RHOXF1 (Sequence: TAATCC (+): 1215792)
RHOXF1 (Sequence: TGATCT (+): 1216096)
RHOXF1 (Sequence: TGAGCC (+): 1216791)
RHOXF1 (Sequence: TGAGCC (+): 1216938)
RHOXF1 (Sequence: TAATCT (+): 1217862)
RHOXF1 (Sequence: TAAGCT (+): 1217971)
RHOXF1 (Sequence: TGATCC (+): 1218633)
RHOXF1 (Sequence: TAAGCC (+): 1219089)
RHOXF1 (Sequence: TAAGCT (+): 1219323)
RHOXF1 (Sequence: TAAGCC (+): 1221049)
RHOXF1 (Sequence: TGATCC (+): 1221399)
RHOXF1 (Sequence: TAATCT (+): 1221863)
RHOXF1 (Sequence: TGATCT (+): 1222012)
RHOXF1 (Sequence: TGAGCC (+): 1222332)
RHOXF1 (Sequence: TAAGCC (+): 1222677)
Rhox11 (Sequence: AATACAGCA (-): 1210753)
Rhox11 (Sequence: TTTACACCA (-): 1217929)
Gata4 (Sequence: AGATAAC (-): 1209665)
Gata4 (Sequence: AGATAAC (-): 1215693)
Gata4 (Sequence: AGATAAG (-): 1216994)
FOXO3_hsa (Sequence: TTGTTTAC (-): 1212404)
Gata4 (Sequence: GTTATCT (+): 1210188)
Gata4 (Sequence: CTTATCT (+): 1214305)
Gata4 (Sequence: GTTATCT (+): 1214445)
Sox5 (Sequence: AACAAT (-): 1210928)
Sox5 (Sequence: AACAAT (-): 1210933)
Sox5 (Sequence: AACAAT (-): 1212147)
Sox5 (Sequence: AACAAT (-): 1217832)
Sox5 (Sequence: AACAAT (-): 1218268)