Predicted piRNA cluster no. 91     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrO_v4 
102025
117906
Gene Set
RepeatMasker
Mapped
Reads
103.84
plus strand
minus strand
103.84
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. TE-452_Dsub: 101838-102137 (+), Divergence to consensus: 19.9%
2. TE-622_Dsub: 102138-102644 (-), Divergence to consensus: 9%
3. TE-621_Dsub: 102912-103349 (-), Divergence to consensus: 35.6%
4. TE-387_Dsub: 103336-103383 (-), Divergence to consensus: 27.1%
5. TE-352_Dsub: 103345-103384 (+), Divergence to consensus: 5.1%
6. HELITRON-4_Dsub: 103354-103405 (+), Divergence to consensus: 20.4%
7. TE-560_Dsub: 103575-104391 (+), Divergence to consensus: 10.6%
8. TE-281_Dsub: 104273-104427 (-), Divergence to consensus: 20.3%
9. TE-621_Dsub: 104390-104554 (-), Divergence to consensus: 32.4%
10. TE-572_Dsub: 104548-104624 (-), Divergence to consensus: 21.2%
11. TE-633_Dsub: 104578-105459 (+), Divergence to consensus: 9.2%
12. TE-613_Dsub: 105018-105468 (-), Divergence to consensus: 28.5%
13. TE-565_Dsub: 105469-105623 (+), Divergence to consensus: 11.6%
14. TE-621_Dsub: 105599-105763 (-), Divergence to consensus: 32.4%
15. TE-613_Dsub: 105624-105637 (-), Divergence to consensus: 28.5%
16. TE-572_Dsub: 105700-105833 (-), Divergence to consensus: 37.1%
17. TE-560_Dsub: 105787-106482 (+), Divergence to consensus: 11.6%
18. TE-225_Dsub: 106483-106596 (-), Divergence to consensus: 8.8%
19. GYPSY-19_Dsub: 108251-108337 (+), Divergence to consensus: 28.7%
20. TE-622_Dsub: 109201-109908 (+), Divergence to consensus: 10%
21. TE-633_Dsub: 109836-110361 (-), Divergence to consensus: 11.3%
22. GYPSY-21_Dsub: 111085-111343 (+), Divergence to consensus: 40.5%
23. GYPSY-21_Dsub: 111691-111812 (+), Divergence to consensus: 30.3%
24. GYPSY-21_Dsub: 112093-112395 (+), Divergence to consensus: 43.8%
25. GYPSY-21_Dsub: 112543-112790 (+), Divergence to consensus: 26.2%
26. GYPSY-21_Dsub: 112813-113975 (+), Divergence to consensus: 35.5%
27. TE-225_Dsub: 113952-114064 (+), Divergence to consensus: 8%
28. TE-587_Dsub: 113970-114670 (-), Divergence to consensus: 19.7%
29. TE-291_Dsub: 114628-114678 (-), Divergence to consensus: 19.6%
30. TE-584_Dsub: 114645-114683 (-), Divergence to consensus: 14.3%
31. GYPSY-21_Dsub: 114666-115741 (+), Divergence to consensus: 34.3%
32. GYPSY-19_Dsub: 117218-117304 (+), Divergence to consensus: 28.7%
33. GYPSY-19_Dsub: 117642-117728 (+), Divergence to consensus: 29.9%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATGA (-): 113363)
SOX9 (Sequence: AACAATAG (-): 114997)
FIGLA (Sequence: AACAGCTGTT (-): 107412)
FIGLA (Sequence: AACAGCTGTT (-): 116381)
Lhx8 (Sequence: TTAATTAA (-): 105733)
Rhox11 (Sequence: CGCTGTTTA (+): 102359)
Rhox11 (Sequence: CGCTGTTAA (+): 106950)
Rhox11 (Sequence: CGCTGTTAA (+): 115919)
FOXO1 (Sequence: GCTGTTTAT (+): 102360)
FOXO1 (Sequence: GTTGTTTAT (+): 106699)
FOXO1 (Sequence: CTTGTTTTT (+): 106767)
FOXO1 (Sequence: GTTGTTTAT (+): 108806)
FOXO1 (Sequence: CTTGTTTTT (+): 115736)
POU5F1 (Sequence: ATGCAAA (+): 103396)
POU5F1 (Sequence: ATGCAAA (+): 112567)
POU5F1 (Sequence: ATGCAAA (+): 115623)
FOXO3_mmu (Sequence: TGTTTTCC (-): 108408)
FOXO3_mmu (Sequence: TGTTTAGC (-): 111754)
FOXO3_mmu (Sequence: TGTTTTCC (-): 117375)
FOXO3_mmu (Sequence: TGTTTTCC (-): 117799)
POU2F1 (Sequence: TATGTTAAT (+): 103441)
Nobox (Sequence: TAATTACT (+): 110355)
RHOXF1 (Sequence: AGATCA (-): 102252)
RHOXF1 (Sequence: GGATCA (-): 102276)
RHOXF1 (Sequence: AGATCA (-): 104007)
RHOXF1 (Sequence: GGATCA (-): 104031)
RHOXF1 (Sequence: AGCTTA (-): 104094)
RHOXF1 (Sequence: AGATCA (-): 104983)
RHOXF1 (Sequence: AGATCA (-): 105284)
RHOXF1 (Sequence: GGATCA (-): 105308)
RHOXF1 (Sequence: AGCTTA (-): 105371)
RHOXF1 (Sequence: AGATCA (-): 106192)
RHOXF1 (Sequence: GGATCA (-): 106216)
RHOXF1 (Sequence: AGCTTA (-): 106279)
RHOXF1 (Sequence: GGCTCA (-): 107938)
RHOXF1 (Sequence: AGCTCA (-): 107945)
RHOXF1 (Sequence: GGATCA (-): 108254)
RHOXF1 (Sequence: AGATTA (-): 109000)
RHOXF1 (Sequence: GGCTCA (-): 109738)
RHOXF1 (Sequence: GGCTCA (-): 109877)
RHOXF1 (Sequence: GGCTCA (-): 110055)
RHOXF1 (Sequence: GGCTCA (-): 110194)
RHOXF1 (Sequence: GGATCA (-): 110572)
RHOXF1 (Sequence: GGCTCA (-): 110835)
RHOXF1 (Sequence: GGCTTA (-): 110875)
RHOXF1 (Sequence: AGATTA (-): 111912)
RHOXF1 (Sequence: GGCTTA (-): 112159)
RHOXF1 (Sequence: GGCTCA (-): 112827)
RHOXF1 (Sequence: AGATTA (-): 112839)
RHOXF1 (Sequence: GGCTTA (-): 113126)
RHOXF1 (Sequence: GGATTA (-): 113894)
RHOXF1 (Sequence: GGCTCA (-): 114415)
RHOXF1 (Sequence: GGCTCA (-): 114550)
RHOXF1 (Sequence: AGATCA (-): 114889)
RHOXF1 (Sequence: AGATCA (-): 115028)
RHOXF1 (Sequence: AGCTCA (-): 115188)
RHOXF1 (Sequence: GGCTCA (-): 116905)
RHOXF1 (Sequence: AGCTCA (-): 116912)
RHOXF1 (Sequence: GGATCA (-): 117221)
RHOXF1 (Sequence: GGATCA (-): 117645)
FOXO3_mmu (Sequence: TGAAAACA (+): 103866)
FOXO3_mmu (Sequence: GGAAAACA (+): 107875)
FOXO3_mmu (Sequence: TCTAAACA (+): 108569)
FOXO3_mmu (Sequence: GCTAAACA (+): 113410)
FOXO3_mmu (Sequence: GCAAAACA (+): 113831)
FOXO3_mmu (Sequence: GGAAAACA (+): 116842)
Sox5 (Sequence: ATTGTT (+): 103423)
Sox5 (Sequence: ATTGTT (+): 106221)
Sox5 (Sequence: ATTGTT (+): 107626)
Sox5 (Sequence: ATTGTT (+): 108653)
Sox5 (Sequence: ATTGTT (+): 113278)
Sox5 (Sequence: ATTGTT (+): 113708)
Sox5 (Sequence: ATTGTT (+): 114978)
Sox5 (Sequence: ATTGTT (+): 116595)
FOXO1 (Sequence: AAAAACAGC (-): 107409)
FOXO1 (Sequence: ATAAACAGC (-): 109515)
FOXO1 (Sequence: AAAAACAGC (-): 116378)
Nobox (Sequence: ACCAATTA (-): 112574)
Mybl1_1 (Sequence: AACCGTTA (+): 114635)
SOX9 (Sequence: TCATTGTT (+): 106219)
SOX9 (Sequence: CCATTGTT (+): 113276)
SOX9 (Sequence: TCATTGTT (+): 114976)
POU5F1 (Sequence: TTTGCAT (-): 104813)
POU5F1 (Sequence: TTTGCAT (-): 106022)
POU5F1 (Sequence: TTTGCAT (-): 111935)
RHOXF1 (Sequence: TGAGCC (+): 102140)
RHOXF1 (Sequence: TGAGCT (+): 102454)
RHOXF1 (Sequence: TGAGCC (+): 103745)
RHOXF1 (Sequence: TGAGCC (+): 104717)
RHOXF1 (Sequence: TGAGCC (+): 104864)
RHOXF1 (Sequence: TGAGCC (+): 105042)
RHOXF1 (Sequence: TGAGCC (+): 105165)
RHOXF1 (Sequence: TGAGCC (+): 105926)
RHOXF1 (Sequence: TGAGCC (+): 106073)
RHOXF1 (Sequence: TAAGCC (+): 107174)
RHOXF1 (Sequence: TGATCT (+): 108079)
RHOXF1 (Sequence: TAAGCT (+): 108993)
RHOXF1 (Sequence: TAAGCC (+): 109087)
RHOXF1 (Sequence: TAATCT (+): 109202)
RHOXF1 (Sequence: TGATCC (+): 109602)
RHOXF1 (Sequence: TGATCT (+): 109626)
RHOXF1 (Sequence: TGATCT (+): 109936)
RHOXF1 (Sequence: TAATCT (+): 110964)
RHOXF1 (Sequence: TAATCC (+): 111344)
RHOXF1 (Sequence: TAAGCT (+): 111429)
RHOXF1 (Sequence: TGAGCC (+): 111516)
RHOXF1 (Sequence: TGATCT (+): 113560)
RHOXF1 (Sequence: TGATCT (+): 113713)
RHOXF1 (Sequence: TAAGCT (+): 114258)
RHOXF1 (Sequence: TGATCC (+): 114321)
RHOXF1 (Sequence: TGATCT (+): 114345)
RHOXF1 (Sequence: TGAGCC (+): 115344)
RHOXF1 (Sequence: TGATCT (+): 115363)
RHOXF1 (Sequence: TAAGCC (+): 116143)
RHOXF1 (Sequence: TGATCT (+): 117046)
Rhox11 (Sequence: TAAACAGCG (-): 109516)
Rhox11 (Sequence: ATTACACCG (-): 113430)
Rhox11 (Sequence: TATACAGCG (-): 115079)
Gata4 (Sequence: AGATAAG (-): 109084)
Gata4 (Sequence: AGATAAG (-): 109635)
Gata4 (Sequence: AGATAAG (-): 111426)
Gata4 (Sequence: AGATAAC (-): 112334)
Gata4 (Sequence: CTTATCT (+): 102242)
Gata4 (Sequence: GTTATCT (+): 102674)
Gata4 (Sequence: CTTATCT (+): 104396)
Gata4 (Sequence: CTTATCT (+): 105605)
Sox5 (Sequence: AACAAT (-): 110784)
Sox5 (Sequence: AACAAT (-): 112493)
Sox5 (Sequence: AACAAT (-): 113363)
Sox5 (Sequence: AACAAT (-): 114997)