Predicted piRNA cluster no. 80     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrJ_v4 
7575024
7587017
Gene Set
RepeatMasker
Mapped
Reads
38.59
plus strand
minus strand
38.59
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation
1. unknown (unknowndsub_v4_00006311) Tr:4: 7586542-7586605 (-)
2. unknown (unknowndsub_v4_00006311) Tr:4: 7575872-7576010 (-)
3. unknown (unknowndsub_v4_00006311) Tr:4: 7574980-7575811 (-)
4. unknown (unknowndsub_v4_00006311) Tr:4: 7586542-7586605 (-)
5. unknown (unknowndsub_v4_00006311) Tr:4: 7575872-7576010 (-)
6. unknown (unknowndsub_v4_00006311) Tr:4: 7574980-7575811 (-)

RepeatMasker Annotation
1. TE-564_Dsub: 7576886-7577286 (+), Divergence to consensus: 4.7%
2. TE-564_Dsub: 7577437-7577986 (+), Divergence to consensus: 6.3%
3. TE-441_Dsub: 7577973-7578897 (+), Divergence to consensus: 1.2%
4. TE-564_Dsub: 7578898-7578974 (-), Divergence to consensus: 5.2%
5. TE-564_Dsub: 7578941-7584104 (+), Divergence to consensus: 1%
6. TE-564_Dsub: 7584103-7584828 (+), Divergence to consensus: 3.6%
7. TE-564_Dsub: 7584979-7585527 (+), Divergence to consensus: 6%
8. TE-441_Dsub: 7585514-7586440 (+), Divergence to consensus: 1.2%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATGA (-): 7575823)
SOX9 (Sequence: AACAATAG (-): 7580137)
SOX9 (Sequence: AACAATAG (-): 7584348)
FOXP1 (Sequence: TGTTTAC (-): 7576497)
Lhx8 (Sequence: TTAATTAA (-): 7577246)
Lhx8 (Sequence: TTAATTAA (-): 7578352)
Lhx8 (Sequence: TTAATTAA (-): 7584788)
Lhx8 (Sequence: TTAATTAA (-): 7585893)
Lhx8 (Sequence: TTAATTAA (-): 7586516)
FOXP1 (Sequence: GTAAACA (+): 7580503)
FOXP1 (Sequence: GTAAACA (+): 7586732)
FOXO3_mmu (Sequence: TGTTTACC (-): 7576497)
FOXO3_mmu (Sequence: TGTTTAGA (-): 7581971)
Nobox (Sequence: TAATTGCT (+): 7576297)
Nobox (Sequence: TAATTGCT (+): 7576652)
Nobox (Sequence: TAATTGCT (+): 7580309)
Nobox (Sequence: TAATTACT (+): 7586521)
RHOXF1 (Sequence: AGATCA (-): 7576661)
RHOXF1 (Sequence: GGCTTA (-): 7576809)
RHOXF1 (Sequence: AGATCA (-): 7577035)
RHOXF1 (Sequence: AGCTTA (-): 7577125)
RHOXF1 (Sequence: AGCTCA (-): 7577746)
RHOXF1 (Sequence: AGATCA (-): 7579155)
RHOXF1 (Sequence: AGATTA (-): 7579264)
RHOXF1 (Sequence: GGATCA (-): 7579323)
RHOXF1 (Sequence: GGATCA (-): 7580459)
RHOXF1 (Sequence: AGATCA (-): 7580479)
RHOXF1 (Sequence: AGATTA (-): 7582104)
RHOXF1 (Sequence: AGCTTA (-): 7582782)
RHOXF1 (Sequence: GGCTCA (-): 7582809)
RHOXF1 (Sequence: GGATCA (-): 7582914)
RHOXF1 (Sequence: GGCTTA (-): 7582934)
RHOXF1 (Sequence: AGATTA (-): 7582963)
RHOXF1 (Sequence: GGATCA (-): 7583589)
RHOXF1 (Sequence: AGATTA (-): 7583991)
RHOXF1 (Sequence: AGCTTA (-): 7584102)
RHOXF1 (Sequence: AGATCA (-): 7584577)
RHOXF1 (Sequence: AGCTTA (-): 7584667)
RHOXF1 (Sequence: AGCTCA (-): 7585288)
FOXO3_mmu (Sequence: TGTAAACA (+): 7586731)
Sox5 (Sequence: ATTGTT (+): 7576674)
Sox5 (Sequence: ATTGTT (+): 7576832)
Sox5 (Sequence: ATTGTT (+): 7577851)
Sox5 (Sequence: ATTGTT (+): 7577966)
Sox5 (Sequence: ATTGTT (+): 7581733)
Sox5 (Sequence: ATTGTT (+): 7585393)
Sox5 (Sequence: ATTGTT (+): 7585507)
FOXO1 (Sequence: GTAAACAGG (-): 7580503)
FOXO1 (Sequence: GAAAACAGC (-): 7582132)
Nobox (Sequence: ACCAATTA (-): 7576637)
SOX9 (Sequence: CCATTGTT (+): 7576830)
POU5F1 (Sequence: TTTGCAT (-): 7578132)
POU5F1 (Sequence: TTTGCAT (-): 7585673)
A-MYB (Sequence: AGACAGTTGG (+): 7576447)
RHOXF1 (Sequence: TAAGCT (+): 7576071)
RHOXF1 (Sequence: TAATCT (+): 7576092)
RHOXF1 (Sequence: TGAGCT (+): 7576530)
RHOXF1 (Sequence: TGAGCT (+): 7577102)
RHOXF1 (Sequence: TGATCC (+): 7577457)
RHOXF1 (Sequence: TAAGCC (+): 7577639)
RHOXF1 (Sequence: TAATCT (+): 7578563)
RHOXF1 (Sequence: TGAGCC (+): 7578829)
RHOXF1 (Sequence: TGATCC (+): 7579047)
RHOXF1 (Sequence: TAATCT (+): 7579567)
RHOXF1 (Sequence: TGAGCC (+): 7580064)
RHOXF1 (Sequence: TAATCT (+): 7580127)
RHOXF1 (Sequence: TAATCT (+): 7581069)
RHOXF1 (Sequence: TGAGCT (+): 7584644)
RHOXF1 (Sequence: TGATCC (+): 7584999)
RHOXF1 (Sequence: TAAGCC (+): 7585181)
RHOXF1 (Sequence: TAATCT (+): 7586104)
RHOXF1 (Sequence: TGAGCC (+): 7586370)
RHOXF1 (Sequence: TGAGCC (+): 7586562)
Rhox11 (Sequence: AATACACCA (-): 7583922)
FOXO3_hsa (Sequence: GTAAACAT (+): 7586732)
Gata4 (Sequence: GTTATCT (+): 7576476)
Gata4 (Sequence: CTTATCT (+): 7576879)
Gata4 (Sequence: GTTATCT (+): 7582564)
Sox5 (Sequence: AACAAT (-): 7575823)
Sox5 (Sequence: AACAAT (-): 7580137)
Sox5 (Sequence: AACAAT (-): 7584348)