Predicted piRNA cluster no. 135     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
1247781
1254993
Gene Set
RepeatMasker
Mapped
Reads
47.22
plus strand
minus strand
47.22
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. TE-445_Dsub: 1248995-1249062 (+), Divergence to consensus: 11.8%
2. TE-625_Dsub: 1249088-1249308 (-), Divergence to consensus: 23.4%
3. TE-555_Dsub: 1249235-1249426 (+), Divergence to consensus: 24.4%
4. TE-632_Dsub: 1249288-1249523 (-), Divergence to consensus: 22.8%
5. TE-632_Dsub: 1249530-1249570 (-), Divergence to consensus: 14.6%
6. TE-605_Dsub: 1249606-1249700 (-), Divergence to consensus: 23.3%
7. TE-559_Dsub: 1249614-1249743 (+), Divergence to consensus: 36.2%
8. TE-466_Dsub: 1249674-1249780 (-), Divergence to consensus: 15.9%
9. TE-492_Dsub: 1249812-1249908 (+), Divergence to consensus: 14.5%
10. TE-492_Dsub: 1249924-1250214 (+), Divergence to consensus: 8.2%
11. TE-281_Dsub: 1250178-1250238 (-), Divergence to consensus: 23.3%
12. TE-622_Dsub: 1250201-1250765 (+), Divergence to consensus: 10.7%
13. TE-320_Dsub: 1250758-1250793 (+), Divergence to consensus: 11.1%
14. TE-492_Dsub: 1250781-1250897 (+), Divergence to consensus: 12%
15. TE-622_Dsub: 1250794-1250806 (-), Divergence to consensus: 14.9%
16. TRANSIB-1_Dsub: 1250899-1250969 (-), Divergence to consensus: 25.4%
17. BILBO-1_Dsub: 1250968-1252558 (-), Divergence to consensus: 31.3%
18. BILBO-1_Dsub: 1252558-1254237 (-), Divergence to consensus: 21.3%
19. TRANSIB-1_Dsub: 1254240-1254289 (-), Divergence to consensus: 6%
20. TE-622_Dsub: 1254283-1255052 (+), Divergence to consensus: 15.2%
21. TE-572_Dsub: 1254923-1255081 (-), Divergence to consensus: 11.9%

Transcription Factor Binding Sites
FOXP1 (Sequence: TGTTTAC (-): 1250186)
Rhox11 (Sequence: CGGTGTTTA (+): 1248036)
Rhox11 (Sequence: CGCTGTTTA (+): 1250704)
FOXO1 (Sequence: CTTGTTTAC (+): 1250184)
FOXO1 (Sequence: GCTGTTTAT (+): 1250705)
FOXO1 (Sequence: GCTGTTTAT (+): 1254105)
POU5F1 (Sequence: ATGCAAA (+): 1252093)
FOXO3_mmu (Sequence: TGTTTAGA (-): 1248039)
FOXO3_mmu (Sequence: TGTTTTCA (-): 1249462)
FOXO3_mmu (Sequence: TGTTTACC (-): 1250186)
FOXO3_mmu (Sequence: TGTTTAGC (-): 1252761)
POU2F1 (Sequence: TATTTTAAT (+): 1248921)
POU2F1 (Sequence: TATGTAAAT (+): 1250906)
POU2F1 (Sequence: TATTCAAAT (+): 1250925)
Nobox (Sequence: TAATTGCC (+): 1248687)
Nobox (Sequence: TAATTGGT (+): 1248697)
RHOXF1 (Sequence: AGATTA (-): 1248030)
RHOXF1 (Sequence: AGCTTA (-): 1248191)
RHOXF1 (Sequence: GGATCA (-): 1248815)
RHOXF1 (Sequence: AGATTA (-): 1249051)
RHOXF1 (Sequence: GGATTA (-): 1249195)
RHOXF1 (Sequence: GGATTA (-): 1249216)
RHOXF1 (Sequence: GGCTTA (-): 1249628)
RHOXF1 (Sequence: AGATTA (-): 1250046)
RHOXF1 (Sequence: AGATCA (-): 1250597)
RHOXF1 (Sequence: GGATCA (-): 1250621)
RHOXF1 (Sequence: AGATCA (-): 1252486)
RHOXF1 (Sequence: AGCTCA (-): 1252721)
RHOXF1 (Sequence: GGCTCA (-): 1254780)
RHOXF1 (Sequence: GGCTCA (-): 1254914)
Sox5 (Sequence: ATTGTT (+): 1247937)
Sox5 (Sequence: ATTGTT (+): 1248221)
Sox5 (Sequence: ATTGTT (+): 1249617)
Sox5 (Sequence: ATTGTT (+): 1250121)
Sox5 (Sequence: ATTGTT (+): 1250792)
Sox5 (Sequence: ATTGTT (+): 1250872)
Sox5 (Sequence: ATTGTT (+): 1253765)
Nobox (Sequence: ACTAATTA (-): 1248679)
SOX9 (Sequence: TTATTGTT (+): 1247935)
SOX9 (Sequence: TTATTGTT (+): 1253763)
POU5F1 (Sequence: TTTGCAT (-): 1248914)
POU5F1 (Sequence: TTTGCAT (-): 1249653)
POU5F1 (Sequence: TTTGCAT (-): 1250441)
Mybl1_1 (Sequence: TAACGGTT (-): 1250266)
RHOXF1 (Sequence: TAAGCT (+): 1248189)
RHOXF1 (Sequence: TGATCT (+): 1248254)
RHOXF1 (Sequence: TGATCT (+): 1249104)
RHOXF1 (Sequence: TGAGCC (+): 1250353)
RHOXF1 (Sequence: TGAGCC (+): 1250492)
RHOXF1 (Sequence: TGAGCC (+): 1251178)
RHOXF1 (Sequence: TGAGCT (+): 1251495)
RHOXF1 (Sequence: TAATCC (+): 1252434)
RHOXF1 (Sequence: TGAGCT (+): 1252719)
RHOXF1 (Sequence: TGATCC (+): 1253782)
RHOXF1 (Sequence: TGAGCT (+): 1253879)
RHOXF1 (Sequence: TGAGCT (+): 1254028)
RHOXF1 (Sequence: TGAGCC (+): 1254206)
RHOXF1 (Sequence: TAAGCT (+): 1254579)
RHOXF1 (Sequence: TGATCC (+): 1254641)
RHOXF1 (Sequence: TGATCT (+): 1254665)
Gata4 (Sequence: AGATAAC (-): 1250263)
FOXO3_hsa (Sequence: TTGTTTAC (-): 1250185)
Gata4 (Sequence: CTTATCT (+): 1251532)
Gata4 (Sequence: GTTATCT (+): 1254715)
Sox5 (Sequence: AACAAT (-): 1250092)