Predicted piRNA cluster no. 137     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrU_v4 
1491056
1502254
Gene Set
RepeatMasker
Mapped
Reads
241.08
plus strand
minus strand
241.08
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation
1. unknown (unknowndsub_v4_00003251) Tr:4: 1499891-1500188 (-)
2. unknown (unknowndsub_v4_00003251) Tr:4: 1499759-1499885 (-)
3. unknown (unknowndsub_v4_00003251) Tr:4: 1496353-1497919 (-)
4. unknown (unknowndsub_v4_00003251) Tr:4: 1496107-1496316 (-)
5. unknown (unknowndsub_v4_00003251) Tr:4: 1494934-1495233 (-)

RepeatMasker Annotation
1. TE-622_Dsub: 1490216-1491199 (+), Divergence to consensus: 37.6%
2. TE-614_Dsub: 1490888-1491254 (-), Divergence to consensus: 21.8%
3. TE-223_Dsub: 1491225-1491245 (-), Divergence to consensus: 26.5%
4. TE-572_Dsub: 1491246-1491360 (+), Divergence to consensus: 21.9%
5. TE-223_Dsub: 1491361-1491379 (-), Divergence to consensus: 26.5%
6. TE-291_Dsub: 1491487-1491775 (-), Divergence to consensus: 33.8%
7. TE-572_Dsub: 1491513-1491639 (+), Divergence to consensus: 1.6%
8. TE-622_Dsub: 1491640-1492260 (-), Divergence to consensus: 13.7%
9. TE-565_Dsub: 1492367-1492516 (+), Divergence to consensus: 31.2%
10. TE-572_Dsub: 1492388-1492598 (-), Divergence to consensus: 33.3%
11. TE-615_Dsub: 1492491-1492621 (+), Divergence to consensus: 37.2%
12. TE-614_Dsub: 1492598-1492848 (-), Divergence to consensus: 17%
13. TE-185_Dsub: 1492786-1492861 (+), Divergence to consensus: 24%
14. TE-167_Dsub: 1492948-1493020 (-), Divergence to consensus: 33.7%
15. TE-349_Dsub: 1493647-1493760 (-), Divergence to consensus: 30.3%
16. TE-621_Dsub: 1493756-1494087 (-), Divergence to consensus: 23.9%
17. TE-621_Dsub: 1494089-1494595 (-), Divergence to consensus: 28.1%
18. TE-621_Dsub: 1494595-1494690 (-), Divergence to consensus: 14.6%
19. TE-90_Dsub: 1494686-1494762 (-), Divergence to consensus: 19.7%
20. TE-493_Dsub: 1494786-1495384 (+), Divergence to consensus: 31.6%
21. TE-113_Dsub: 1495512-1496108 (-), Divergence to consensus: 7.2%
22. TE-113_Dsub: 1497857-1498356 (-), Divergence to consensus: 1.6%
23. TE-113_Dsub: 1498447-1499567 (-), Divergence to consensus: 9.7%
24. TE-493_Dsub: 1499574-1500385 (+), Divergence to consensus: 28.2%
25. TE-536_Dsub: 1500387-1500596 (-), Divergence to consensus: 27.1%
26. TE-330_Dsub: 1501003-1501039 (-), Divergence to consensus: 10.8%
27. TE-622_Dsub: 1501489-1502012 (-), Divergence to consensus: 36%
28. TE-601_Dsub: 1501522-1502051 (+), Divergence to consensus: 42.9%
29. TE-379_Dsub: 1502052-1502137 (-), Divergence to consensus: 27.7%
30. TE-601_Dsub: 1502138-1502157 (+), Divergence to consensus: 42.9%

Transcription Factor Binding Sites
RFX4_2 (Sequence: CGTGGATAC (+): 1492569)
RFX4_2 (Sequence: CTTGGTTAC (+): 1495778)
Rhox11 (Sequence: CGCTGTTTA (+): 1491988)
Rhox11 (Sequence: TGGTGTTTT (+): 1492476)
Rhox11 (Sequence: CGGTGTTAT (+): 1499345)
Rhox11 (Sequence: TGGTGTTAA (+): 1499567)
FOXO1 (Sequence: GCTGTTTAT (+): 1491989)
FOXO1 (Sequence: GTTGTTTTT (+): 1501608)
FOXO3_mmu (Sequence: TGTTTTCA (-): 1501168)
POU2F1 (Sequence: TATTTTAAT (+): 1500812)
Nobox (Sequence: TAATTGGT (+): 1499563)
RHOXF1 (Sequence: AGATCA (-): 1491889)
RHOXF1 (Sequence: GGATCA (-): 1491913)
RHOXF1 (Sequence: AGATCA (-): 1492553)
RHOXF1 (Sequence: GGATCA (-): 1494201)
RHOXF1 (Sequence: AGATCA (-): 1494772)
RHOXF1 (Sequence: GGCTTA (-): 1495187)
RHOXF1 (Sequence: GGATCA (-): 1496618)
RHOXF1 (Sequence: GGATCA (-): 1496741)
RHOXF1 (Sequence: GGATCA (-): 1496864)
RHOXF1 (Sequence: GGATCA (-): 1497053)
RHOXF1 (Sequence: GGATCA (-): 1497176)
RHOXF1 (Sequence: GGATCA (-): 1497488)
RHOXF1 (Sequence: AGCTTA (-): 1499559)
RHOXF1 (Sequence: GGCTTA (-): 1500189)
RHOXF1 (Sequence: AGATTA (-): 1500831)
RHOXF1 (Sequence: AGCTCA (-): 1502119)
Sox5 (Sequence: ATTGTT (+): 1493445)
Sox5 (Sequence: ATTGTT (+): 1494490)
Sox5 (Sequence: ATTGTT (+): 1499613)
FOXO1 (Sequence: AAAAACAAC (-): 1491248)
POU2F1 (Sequence: ATTAAAATA (-): 1492889)
POU2F1 (Sequence: ATTTACATA (-): 1501012)
POU5F1 (Sequence: TTTGCAT (-): 1491727)
POU5F1 (Sequence: TTTGCAT (-): 1494609)
RHOXF1 (Sequence: TGAGCC (+): 1491777)
RHOXF1 (Sequence: TAAGCC (+): 1493100)
RHOXF1 (Sequence: TAAGCC (+): 1493630)
RHOXF1 (Sequence: TAAGCC (+): 1494500)
RHOXF1 (Sequence: TAATCC (+): 1495575)
RHOXF1 (Sequence: TAATCC (+): 1496120)
RHOXF1 (Sequence: TGATCC (+): 1496218)
RHOXF1 (Sequence: TGATCC (+): 1498290)
RHOXF1 (Sequence: TGAGCT (+): 1498450)
RHOXF1 (Sequence: TGATCT (+): 1498541)
RHOXF1 (Sequence: TGAGCC (+): 1500723)
RHOXF1 (Sequence: TGATCT (+): 1501807)
RHOXF1 (Sequence: TGAGCC (+): 1501957)
Rhox11 (Sequence: TAAACAGCG (-): 1493913)
Gata4 (Sequence: CTTATCT (+): 1501865)
Sox5 (Sequence: AACAAT (-): 1492331)
Sox5 (Sequence: AACAAT (-): 1493121)
Sox5 (Sequence: AACAAT (-): 1494392)
Sox5 (Sequence: AACAAT (-): 1495550)
Sox5 (Sequence: AACAAT (-): 1502079)