Predicted piRNA cluster no. 125     previous   next

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1 hit
2-5 hits
6-10 hits
11-20 hits
21-50 hits
51-100 hits
> 100 hits
ChrO_v4 
30269171
30283473
Gene Set
RepeatMasker
Mapped
Reads
38.03
plus strand
minus strand
38.03
RepeatMasker Color Code
+
100-98% Identity
<98-95% Identity
<95-90% Identity
<90-85% Identity
<85-80% Identity
<80-75% Identity
<75-70% Identity
<70% Identity
-
Gene Set Color Code
+
Gene
Pseudogene
Other
-
Topology/Coverage Color Code
Coverage Plus Strand
Coverage Minus Strand
Mainstrand: Plus
Mainstrand: Minus
Complementary Strand
Flanking Region
(if option -flank >0)
Gene Set Annotation

RepeatMasker Annotation
1. POLINTON-1_Dsub: 30272015-30272140 (+), Divergence to consensus: 26.7%
2. TE-420_Dsub: 30272210-30272318 (+), Divergence to consensus: 32.1%
3. TE-622_Dsub: 30272314-30272468 (+), Divergence to consensus: 21.1%
4. TE-622_Dsub: 30272349-30272471 (-), Divergence to consensus: 19.5%
5. TE-236_Dsub: 30272632-30272675 (+), Divergence to consensus: 12%
6. TE-560_Dsub: 30272648-30273063 (+), Divergence to consensus: 7%
7. TE-631_Dsub: 30273060-30273169 (+), Divergence to consensus: 13.6%
8. TE-631_Dsub: 30273146-30273640 (-), Divergence to consensus: 3.6%
9. TE-622_Dsub: 30273618-30274417 (+), Divergence to consensus: 6.5%
10. TE-252_Dsub: 30274356-30274429 (-), Divergence to consensus: 21.8%
11. TE-631_Dsub: 30274414-30275573 (-), Divergence to consensus: 3.5%
12. TE-605_Dsub: 30275688-30275788 (+), Divergence to consensus: 30.9%
13. TE-631_Dsub: 30275715-30278378 (-), Divergence to consensus: 5.2%
14. TE-565_Dsub: 30278348-30279085 (-), Divergence to consensus: 15.1%
15. TE-387_Dsub: 30279036-30279097 (+), Divergence to consensus: 6.5%
16. TE-631_Dsub: 30279083-30279194 (-), Divergence to consensus: 11.6%
17. TE-436_Dsub: 30279920-30279960 (+), Divergence to consensus: 12.2%
18. TE-622_Dsub: 30279934-30280617 (+), Divergence to consensus: 17.7%
19. TE-604_Dsub: 30280278-30280662 (+), Divergence to consensus: 21.7%
20. TE-541_Dsub: 30281718-30282310 (+), Divergence to consensus: 29.1%
21. TE-541_Dsub: 30282364-30282732 (+), Divergence to consensus: 40.6%
22. TE-427_Dsub: 30282818-30282995 (+), Divergence to consensus: 29.5%
23. TE-427_Dsub: 30283088-30283188 (+), Divergence to consensus: 29%
24. TE-541_Dsub: 30283330-30283474 (+), Divergence to consensus: 31%

Transcription Factor Binding Sites
SOX9 (Sequence: AACAATAA (-): 30269950)
SOX9 (Sequence: AACAATAA (-): 30271256)
SOX9 (Sequence: AACAATGA (-): 30282223)
RFX4_2 (Sequence: CGTGGATAC (+): 30283192)
FIGLA (Sequence: TACAGCTGTA (-): 30271750)
Lhx8 (Sequence: CTAATTAA (-): 30279254)
Rhox11 (Sequence: CGCTGTTTA (+): 30274133)
FOXO1 (Sequence: CCTGTTTTT (+): 30269432)
FOXO1 (Sequence: CCTGTTTTT (+): 30270755)
FOXO1 (Sequence: GCTGTTTAT (+): 30274134)
FOXO1 (Sequence: GTTGTTTTT (+): 30282512)
FOXO1 (Sequence: GTTGTTTTT (+): 30282829)
POU5F1 (Sequence: ATGCAAA (+): 30278878)
POU5F1 (Sequence: ATGCAAA (+): 30280412)
POU5F1 (Sequence: ATGCAAA (+): 30280981)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30274417)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30275052)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30275822)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30276460)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30277098)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30277702)
FOXO3_mmu (Sequence: TGTTTAGA (-): 30278344)
FOXO3_mmu (Sequence: TGTTTTGC (-): 30278617)
POU2F1 (Sequence: TATGCAAAT (+): 30280980)
RHOXF1 (Sequence: AGCTCA (-): 30269645)
RHOXF1 (Sequence: GGCTTA (-): 30269889)
RHOXF1 (Sequence: AGCTCA (-): 30270968)
RHOXF1 (Sequence: GGCTTA (-): 30272377)
RHOXF1 (Sequence: AGATCA (-): 30273038)
RHOXF1 (Sequence: GGATCA (-): 30274050)
RHOXF1 (Sequence: AGCTCA (-): 30275598)
RHOXF1 (Sequence: GGCTCA (-): 30278826)
RHOXF1 (Sequence: GGCTTA (-): 30279394)
RHOXF1 (Sequence: GGCTCA (-): 30280364)
RHOXF1 (Sequence: GGCTCA (-): 30280493)
RHOXF1 (Sequence: GGATTA (-): 30281708)
RHOXF1 (Sequence: GGCTCA (-): 30282274)
RHOXF1 (Sequence: AGATCA (-): 30282883)
FOXO3_mmu (Sequence: GGAAAACA (+): 30269446)
FOXO3_mmu (Sequence: TCAAAACA (+): 30270445)
FOXO3_mmu (Sequence: GGAAAACA (+): 30270769)
Sox5 (Sequence: ATTGTT (+): 30270194)
Sox5 (Sequence: ATTGTT (+): 30270329)
Sox5 (Sequence: ATTGTT (+): 30271514)
Sox5 (Sequence: ATTGTT (+): 30271949)
Sox5 (Sequence: ATTGTT (+): 30272491)
Sox5 (Sequence: ATTGTT (+): 30280708)
Sox5 (Sequence: ATTGTT (+): 30281692)
FOXO1 (Sequence: ATAAACAGC (-): 30280177)
FOXO1 (Sequence: GAAAACAAC (-): 30282369)
Nobox (Sequence: ACCAATTA (-): 30274453)
Nobox (Sequence: ACCAATTA (-): 30275088)
Nobox (Sequence: ACCAATTA (-): 30275860)
Nobox (Sequence: ACCAATTA (-): 30276496)
Nobox (Sequence: AGCAATTA (-): 30277134)
Nobox (Sequence: ACCAATTA (-): 30277738)
Nobox (Sequence: ACCAATTA (-): 30279094)
Nobox (Sequence: ACTAATTA (-): 30279253)
Mybl1_1 (Sequence: AACCGTTA (+): 30279028)
Mybl1_1 (Sequence: AACCGTTA (+): 30280582)
POU2F1 (Sequence: ATTAAAATA (-): 30279257)
POU2F1 (Sequence: ATTAACATA (-): 30280924)
SOX9 (Sequence: TTATTGTT (+): 30270192)
SOX9 (Sequence: TTATTGTT (+): 30271512)
SOX9 (Sequence: TTATTGTT (+): 30271947)
SOX9 (Sequence: TTATTGTT (+): 30280706)
SOX9 (Sequence: TTATTGTT (+): 30281690)
POU5F1 (Sequence: TTTGCAT (-): 30273863)
POU5F1 (Sequence: TTTGCAT (-): 30282599)
POU5F1 (Sequence: TTTGCAT (-): 30282796)
POU5F1 (Sequence: TTTGCAT (-): 30282807)
POU5F1 (Sequence: TTTGCAT (-): 30282818)
Mybl1_1 (Sequence: TAACGGTT (-): 30273688)
RHOXF1 (Sequence: TGATCT (+): 30269938)
RHOXF1 (Sequence: TGAGCC (+): 30270435)
RHOXF1 (Sequence: TGATCT (+): 30271487)
RHOXF1 (Sequence: TGAGCT (+): 30271775)
RHOXF1 (Sequence: TAATCT (+): 30272441)
RHOXF1 (Sequence: TAAGCT (+): 30272458)
RHOXF1 (Sequence: TGAGCC (+): 30272787)
RHOXF1 (Sequence: TAATCT (+): 30273301)
RHOXF1 (Sequence: TGAGCC (+): 30273914)
RHOXF1 (Sequence: TAATCT (+): 30274715)
RHOXF1 (Sequence: TAATCT (+): 30274934)
RHOXF1 (Sequence: TAATCT (+): 30275350)
RHOXF1 (Sequence: TAATCT (+): 30276122)
RHOXF1 (Sequence: TAATCT (+): 30276341)
RHOXF1 (Sequence: TAATCT (+): 30276758)
RHOXF1 (Sequence: TAATCT (+): 30276979)
RHOXF1 (Sequence: TGATCT (+): 30277377)
RHOXF1 (Sequence: TAATCT (+): 30277583)
RHOXF1 (Sequence: TAATCT (+): 30278000)
RHOXF1 (Sequence: TAATCT (+): 30278225)
RHOXF1 (Sequence: TAAGCT (+): 30278627)
RHOXF1 (Sequence: TGATCC (+): 30278690)
RHOXF1 (Sequence: TGATCT (+): 30278714)
RHOXF1 (Sequence: TGATCT (+): 30279556)
RHOXF1 (Sequence: TGATCC (+): 30280264)
RHOXF1 (Sequence: TAATCT (+): 30283012)
RHOXF1 (Sequence: TGATCT (+): 30283129)
Rhox11 (Sequence: AAAACACCA (-): 30269448)
Rhox11 (Sequence: AAAACACCA (-): 30270771)
Rhox11 (Sequence: TTAACACCA (-): 30271583)
Rhox11 (Sequence: TAAACAGCG (-): 30280178)
Gata4 (Sequence: AGATAAG (-): 30271391)
Gata4 (Sequence: AGATAAC (-): 30272987)
Gata4 (Sequence: GTTATCT (+): 30272302)
Sox5 (Sequence: AACAAT (-): 30269950)
Sox5 (Sequence: AACAAT (-): 30271256)
Sox5 (Sequence: AACAAT (-): 30271719)
Sox5 (Sequence: AACAAT (-): 30272532)
Sox5 (Sequence: AACAAT (-): 30273453)
Sox5 (Sequence: AACAAT (-): 30275450)
Sox5 (Sequence: AACAAT (-): 30275502)
Sox5 (Sequence: AACAAT (-): 30277514)
Sox5 (Sequence: AACAAT (-): 30278159)
Sox5 (Sequence: AACAAT (-): 30282223)