Sub-family | Members of Subfamily | Known Motifs in All | Bootstrap Values (PPars, Fitch, NJ) |
Conserved Function |
---|---|---|---|---|
SNF2 | hBRM-human BRG1-human BRG1-mouse BRM-Dmelano STH1-yeast SNF2-yeast |
bromodomain | 100,100,100 | Transcription activation. Remove histones from DNA |
SNF2L | SNF2L-human F37A4-Celegans ISWI-Dmelano YB95-yeast |
none | 100,100,100 | Nucleosome remodelling? |
CHD1 | CHD1-mouse SYGP4-yeast |
chromodomain | 100,100,100 | ? |
ETL1 | ETL1-mouse FUN30-yeast |
none | 97,100,100 | ? |
ERCC6 | ERCC6-human RAD26-yeast |
none | 100,100,100 | Transcription-coupled repair. Moves stalled RNA polymerase? |
RAD16 | RAD16-yeast RAD5-yeast RAD8-pombe HIP116A-human |
RING finger | 47,83,62 | ? |
RAD54 | RAD54-yeast YB53-yeast DNRPPX-pombe NUCPRO-human NUCPRO-mouse |
none | 81,92,94 | Recombination repair. |
MOT1 | MOT1-yeast | none | n/a,n/a,n/a | Removes TATA-binding protein from DNA. |