Thermodynamics of Binding of d-Galactose and Deoxy
Derivatives thereof to the l-Arabinose-binding Protein
Posted on 2004-09-29 - 00:00
We report the thermodynamics of binding of d-galactose and deoxy derivatives thereof to the
arabinose binding protein (ABP). The “intrinsic” (solute−solute) free energy of binding ΔG°int at 308 K for
the 1-, 2-, 3-, and 6-hydroxyl groups of galactose is remarkably constant (∼−30 kJ/mol), despite the fact
that each hydroxyl group subtends different numbers of hydrogen bonds in the complex. The substantially
unfavorable enthalpy of binding (∼30 kJ/mol) of 1-deoxygalactose, 2-deoxygalactose, and 3-deoxygalactose
in comparison with galactose, cannot be readily accounted for by differences in solvation, suggesting that
solute−solute hydrogen bonds are enthalpically significantly more favorable than solute−solvent hydrogen
bonds. In contrast, the substantially higher affinity for 2-deoxygalactose in comparison with either
1-deoxygalactose or 3-deoxygalactose derives from differences in the solvation free energies of the free
ligands.
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Daranas, Antonio Hernandez; Shimizu, Hiroki; Homans, Steve W. (2016). Thermodynamics of Binding of d-Galactose and Deoxy
Derivatives thereof to the l-Arabinose-binding Protein. ACS Publications. Collection. https://doi.org/10.1021/ja048054m