Computationally
Efficient Polarizable MD Simulations:
A Simple Water Model for the Classical Drude Oscillator Polarizable
Force Field
Posted on 2025-01-22 - 15:59
An improvement in the computational efficiency of polarizable
force
field simulations is made through the development of a polarizable
Drude water model, SWM3, in combination with the use of Lennard-Jones
Particle Mesh Ewald (LJPME) for the treatment of long-range LJ interactions.
The experimental bulk properties, density, heat of vaporization, dielectric
constant, and self-diffusion constant of the SWM3 model are accurately
replicated at ambient condition. The temperature dependence of the
bulk properties is also captured except for the density. Microscopic
properties, such as hydration free energy, dimer properties, and binding
energies of clusters are well represented. The SWM3 model is ∼40%
faster than the SWM4 water model traditionally used with the Drude
force field, and use of LJPME offers an additional 30% speedup in
heterogeneous systems. This combination makes the SWM3-based Drude
model only 2.6-fold slower than the TIP3P-based additive simulations.
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Teng, Xiaojing; Yu, Wenbo; MacKerell, Alexander D. (2025). Computationally
Efficient Polarizable MD Simulations:
A Simple Water Model for the Classical Drude Oscillator Polarizable
Force Field. ACS Publications. Collection. https://doi.org/10.1021/acs.jpclett.4c03451