Microbiology

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Winther-Have_Supplementary_Information.xlsx

dataset posted on 2025-05-08

Caroline Sophie Winther-Have

collection:
Data and code repository for "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

posted on 2025-05-08

DATASET

Data from: "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

dataset posted on 2025-05-08

SOFTWARE

Code from: "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

software posted on 2025-05-08

segmented RNA virus

dataset posted on 2025-05-08

liu xue

SOFTWARE

RAZOR

software posted on 2025-05-07

Hunter Gill

<b>Distribution prediction of the habitat of Jingmen tick virus in China</b><b>Distribution prediction of the habitat of Jingmen tick virus in China</b>

Distribution prediction of the habitat of Jingmen tick virus in ChinaDistribution prediction of the habitat of Jingmen tick virus in China

dataset posted on 2025-05-07

Weiyi Li

<b>Supplementary Tables & Figures of "</b><b>A virulent phage vB_VpaP_R28Z infecting </b><b><i>Vibrio parahaemolyticus</i></b><b> with potential for therapeutic application"</b>

Supplementary Tables & Figures of "A virulent phage vB_VpaP_R28Z infecting Vibrio parahaemolyticus with potential for therapeutic application"

dataset posted on 2025-05-07

11months

26days

FILES UNDER EMBARGO

Naiavirus Proteome

dataset posted on 2025-05-06

Jonatas Abrahao

DATASET

RuSpacer: CRISPR Spacer Database from the Ruminant Gastrointestinal Microbiome

dataset posted on 2025-05-06

Yoshiaki Sato

Dataset for enhancing the virulence of G2a subtype PEDV by chimeric expression of G2c subtype Sgene.

dataset posted on 2025-05-06

DATASET

The temporal upsurge in Dengue in 2024 created a medical emergency in Guatemala

dataset posted on 2025-05-05

<b>Characterization of S</b><b><i>iphoviridae </i></b><b>Bacteriophage Induction of Lytic Cycle of Prophage in </b><b><i>Serratia marcescens</i></b>

**Characterization of Siphoviridae Bacteriophage Induction of Lytic Cycle of Prophage in *Serratia marcescens***

thesis posted on 2025-05-05 in Purdue University Graduate School

Selena Canuto

DATASET

Virome profile of wild rodents from Yili River Valley of Xinjiang, China

dataset posted on 2025-05-05

Yingying Ma

DATASET

Tabela S2_DIAMOND.xlsx

dataset posted on 2025-05-03

Ellen Caroline Nobre Santos

DATASET

Tabela S1_Blastn.xlsx

dataset posted on 2025-05-03

Ellen Caroline Nobre Santos

<b>Evaluation of the Mutational Preferences throughout the Whole Genome of the Identified Variants of the SARS-COV-2 Virus Isolates in Bangladesh</b>

Evaluation of the Mutational Preferences throughout the Whole Genome of the Identified Variants of the SARS-COV-2 Virus Isolates in Bangladesh

dataset posted on 2025-05-01

Results from small volume blood testing validity and acceptability for HIV-1 detectable viral load

poster posted on 2025-05-01

DATASET

Data Set for the manuscript "Omicron impacts olfaction in hamsters"

dataset posted on 2025-04-29

Nicolas Meunier

Temperature affects reptarenavirus growth in a permissive host-derived in vitro model

dataset posted on 2025-04-29 in Microbiology Society

OrfViralScan 3.0: Herramienta intuitiva para la identificación y rastreo de marcos de lectura abiertos en genomas virales

preprint posted on 2025-04-27

Roberto Reinosa

Supplemental Tables

journal contribution posted on 2025-04-26

Brigitte Martin

DATASET

BED files for primer trimming - amplicon based sequencing of TOSV segments L, M and S (C.ARBO.SEQ project)

dataset posted on 2025-04-25

Martina Brandolini

DATASET

primers_TOSV_segmentS.bed

dataset posted on 2025-04-25

Martina Brandolini

DATASET

primers_TOSV_segmentM.bed

dataset posted on 2025-04-25

Martina Brandolini

DATASET

primers_TOSV_segmentL.bed

dataset posted on 2025-04-25

Martina Brandolini

DATASET

glacier foreland microbiome

dataset posted on 2025-04-25

Hu Liao

(Supplementary Files) Assessing Antiviral Mechanisms of N-acetyl-D-glucosamine, N-acetylcysteine and Acetylsalicylic acid on SARS-CoV-2

dataset posted on 2025-04-24

Supporting data for Study on NS mRNA splicing and nuclear export mediated by N(6)-Methyladenosine and NS1 in influenza A virus

dataset posted on 2025-04-23 in HKU Data Repository

Occurrence of viruses in a global collection of<i> </i><i>Phytophthora cinnamomi</i>

Occurrence of viruses in a global collection of Phytophthora cinnamomi

dataset posted on 2025-04-22

Leticia Botella

Single-dose replicon RNA Sudan virus vaccine uniformly protects female guinea pigs from disease

dataset posted on 2025-04-22

Andrea Marzi

DATASET

Virscan Top Public Reactive Peptides

dataset posted on 2025-04-21

Dira Putri

Movies from the revised version of manuscript McKellar et al. initially posted on bioRxiv in 2024: Human MX1 induces the cytoplasmic sequestration of neo-synthesized influenza A virus vRNPs

dataset posted on 2025-04-18

Caroline Goujon

Epidemic dynamics and clinical characteristics of HIV-1 07BC_N and 07BC_O in Shanghai, 2017-2023

dataset posted on 2025-04-17

Yingying Ma

DATASET

Data set for manuscript "Mucin anchoring of SARS-CoV-2 neutralizing nanobinders increases intranasal antiviral efficacy"

dataset posted on 2025-04-15

Nicolas Meunier

DATASET

Raw Data

dataset posted on 2025-04-15

苏华胡

Permanent

FILES UNDER EMBARGO

SourceDataByFigure

figure posted on 2025-04-14

David Hawman

DATASET

Virgo Benchmarking Datasets

dataset posted on 2025-04-13

Christopher Riccardi

DATASET

Multi-omics analysis of SFTS virus infection in Rhipicephalus microplus cells reveals antiviral tick factor Supplementary Data 5 -including the sqlite database with PASA-EVM splicing information for BME/CTVM6 cells.

dataset posted on 2025-04-12

Marine J. Petit

Trypsin Cleavage of Bat CoV Spike Proteins

figure posted on 2025-04-11

Kartik Chandran

Microbiology

Winther-Have_Supplementary_Information.xlsx

collection: Data and code repository for "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

Data from: "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

Code from: "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

segmented RNA virus

RAZOR

Distribution prediction of the habitat of Jingmen tick virus in ChinaDistribution prediction of the habitat of Jingmen tick virus in China

Supplementary Tables & Figures of "A virulent phage vB_VpaP_R28Z infecting Vibrio parahaemolyticus with potential for therapeutic application"

Naiavirus Proteome

RuSpacer: CRISPR Spacer Database from the Ruminant Gastrointestinal Microbiome

Dataset for enhancing the virulence of G2a subtype PEDV by chimeric expression of G2c subtype Sgene.

The temporal upsurge in Dengue in 2024 created a medical emergency in Guatemala

Characterization of Siphoviridae Bacteriophage Induction of Lytic Cycle of Prophage in Serratia marcescens

Virome profile of wild rodents from Yili River Valley of Xinjiang, China

Tabela S2_DIAMOND.xlsx

Tabela S1_Blastn.xlsx

Evaluation of the Mutational Preferences throughout the Whole Genome of the Identified Variants of the SARS-COV-2 Virus Isolates in Bangladesh

Results from small volume blood testing validity and acceptability for HIV-1 detectable viral load

Data Set for the manuscript "Omicron impacts olfaction in hamsters"

Temperature affects reptarenavirus growth in a permissive host-derived in vitro model

OrfViralScan 3.0: Herramienta intuitiva para la identificación y rastreo de marcos de lectura abiertos en genomas virales

Supplemental Tables

BED files for primer trimming - amplicon based sequencing of TOSV segments L, M and S (C.ARBO.SEQ project)

primers_TOSV_segmentS.bed

primers_TOSV_segmentM.bed

primers_TOSV_segmentL.bed

glacier foreland microbiome

(Supplementary Files) Assessing Antiviral Mechanisms of N-acetyl-D-glucosamine, N-acetylcysteine and Acetylsalicylic acid on SARS-CoV-2

Supporting data for Study on NS mRNA splicing and nuclear export mediated by N(6)-Methyladenosine and NS1 in influenza A virus

Occurrence of viruses in a global collection of Phytophthora cinnamomi

Single-dose replicon RNA Sudan virus vaccine uniformly protects female guinea pigs from disease

Virscan Top Public Reactive Peptides

Movies from the revised version of manuscript McKellar et al. initially posted on bioRxiv in 2024: Human MX1 induces the cytoplasmic sequestration of neo-synthesized influenza A virus vRNPs

Epidemic dynamics and clinical characteristics of HIV-1 07BC_N and 07BC_O in Shanghai, 2017-2023

Data set for manuscript "Mucin anchoring of SARS-CoV-2 neutralizing nanobinders increases intranasal antiviral efficacy"

Raw Data

SourceDataByFigure

Virgo Benchmarking Datasets

Multi-omics analysis of SFTS virus infection in Rhipicephalus microplus cells reveals antiviral tick factor Supplementary Data 5 -including the sqlite database with PASA-EVM splicing information for BME/CTVM6 cells.

Trypsin Cleavage of Bat CoV Spike Proteins

collection:
Data and code repository for "Single-cell analyses identify monocyte gene expression profiles that influence HIV-1 reservoir size in acutely treated cohorts"

**Characterization of Siphoviridae Bacteriophage Induction of Lytic Cycle of Prophage in *Serratia marcescens***