Taikui Zhang

Publications

• An integrated approach to identify cytochrome P450 superfamilies in plant species within the malvids
• Progress in plant paleogenomics
• Codon usage bias in pomegranate transcriptome
• Land-plant Phylogenomic and Pomegranate Transcriptomic Analyses Reveal an Evolutionary Scenario of CYP75 Genes Subsequent to Whole Genome Duplications
• Quick convergent evolution of MBW complex for pomegranate fruit coloration
• Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in Fabaceae
• An ancient whole-genome duplication event and its contribution to flavor compounds in the tea plant (Camellia sinensis)
• The nearly complete assembly of Cercis chinensis genome and Fabaceae phylogenomic studies provide insights into new gene evolution
• The pomegranate (Punica granatum L.) genome provides insights into fruit quality and ovule developmental biology
• Asterid Phylogenomics/Phylotranscriptomics Uncover Morphological Evolutionary Histories and Support Phylogenetic Placement for Numerous Whole-Genome Duplications
• Phylotranscriptomics Resolves the Phylogeny of Pooideae and Uncovers Factors for Their Adaptive Evolution
• Tree2GD: a phylogenomic method to detect large-scale gene duplication events
• Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae)
• Angiosperm‐wide analysis of fruit and ovary evolution aided by a new nuclear phylogeny supports association of the same ovary type with both dry and fleshy fruits
• Data for: Angiosperm-wide analysis of fruit and ovary evolution aided by a new nuclear phylogeny supports association of the same ovary type with both dry and fleshy fruits
• Phylogenomic profiles of whole-genome duplications in Poaceae and landscape of differential duplicate retention and losses among major Poaceae lineages
• Relationship of Soil Microbiota to Seed Kernel Metabolism in Camellia oleifera Under Mulched
• An ancient whole-genome duplication event and its contribution to flavor compounds in the tea plant (Camellia sinensis)
• The pomegranate (Punica granatum L.) genome provides insights into fruit quality and ovule developmental biology
• Enhancing expression of SSU1 genes in Saccharomyces uvarum leads to an increase in sulfite tolerance and a transcriptome profile change
• The nearly complete assembly of the Cercis chinensis genome and Fabaceae phylogenomic studies provide insights into new gene evolution
• Angiosperm-wide analysis of fruit and ovary evolution aided by a new nuclear phylogeny supports association of the same ovary type with both dry and fleshy fruits
• The origin and evolution of cultivated rice and genomic signatures of heterosis for yield traits in super-hybrid rice
• Phylogenomic and Phylotranscriptomic Analyses of Whole Genome Duplications in Large Angiosperm Groups and Families with Implication on Functional Evolution
• Pan-genome analysis reveals the evolution and diversity of Malus
• Nuclear Phylogenomics of Angiosperms and Evolutionary Implications
• Genome-wide Expression Analysis of Sulfite Tolerance Genes in Saccharomyces Cerevisiae