THIAGO VENANCIO

Publications

• Zika virus infection drives epigenetic modulation of immunity by the histone acetyltransferase CBP of Aedes aegypti
• Integrating omics approaches to discover and prioritize candidate genes involved in oil biosynthesis in soybean
• Evolution and multiple roles of the Pancrustacea specific transcription factor zelda in insects
• De novo transcriptome sequencing and comparative analysis of midgut tissues of four non-model insects pertaining to Hemiptera, Coleoptera, Diptera and Lepidoptera
• BioNERO: an all-in-one R/Bioconductor package for comprehensive and easy biological network reconstruction
• Genome sequencing and assessment of plant growth-promoting properties of a Serratia marcescens strain isolated from vermicompost
• Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection
• Polyploidization events shaped the transcription factor repertoires in legumes (Fabaceae)
• Integration of genome-wide association studies and gene coexpression networks unveils promising soybean resistance genes against five common fungal pathogens
• Discovering and prioritizing candidate resistance genes against soybean pests by integrating GWAS and gene coexpression networks
• Discovering and prioritizing candidate resistance genes against soybean pests by integrating GWAS and gene coexpression networks
• Genome sequencing of the vermicompost strain Stenotrophomonas maltophilia UENF-4GII and population structure analysis of the S. maltophilia Sm3 genogroup
• Multiomic Approaches Reveal Hormonal Modulation and Nitrogen Uptake and Assimilation in the Initial Growth of Maize Inoculated with Herbaspirillum seropedicae
• Copaifera langsdorffii Novel Putative lncRNA: Interspecies Conservation Analysis in Adaptive Response to Different Biomes
• Population structure and pangenome analysis of Enterobacter bugandensis uncover the presence of blaCTX-M-55, blaNDM-5 and blaIMI-1, along with sophisticated iron acquisition strategies
• Comparative genomics and phylogenomics ofCampylobacterunveil potential novel species and provide insights into niche segregation
• Genome sequencing of the vermicompost strain Stenotrophomonas maltophilia UENF-4GII and population structure analysis of the S. maltophilia Sm3 genogroup
• Systematic analysis of 1,298 RNA-Seq samples and construction of a comprehensive soybean (Glycine max) expression atlas
• Heme signaling impacts global gene expression, immunity and dengue virus infectivity in Aedes aegypti
• Transcriptome analysis uncovers key regulatory and metabolic aspects of soybean embryonic axes during germination
• Effects of Phaseolus vulgaris (Fabaceae) seed coat on the embryonic and larval development of the cowpea weevil Callosobruchus maculatus (Coleoptera: Bruchidae)
• Erratum: Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection (Proceedings of the National Academy of Sciences of the United States of America (2015) 112 (14936-14941) DOI 10.1073/pnas.1506226112)
• Development of a gene-centered ssr atlas as a resource for papaya (Carica papaya) marker-assisted selection and population genetic studies
• Uncovering major genomic features of essential genes in Bacteria and a methanogenic Archaea
• Genome sequencing of four multidrug-resistant enterobacter aerogenes isolates from hospitalized patients in Brazil
• Evolutionary analysis of multidrug resistance genes in fungi - Impact of gene duplication and family conservation
• Transcriptional landscape of soybean (Glycine max) embryonic axes during germination in the presence of paclobutrazol, a gibberellin biosynthesis inhibitor
• cageminer: an R/Bioconductor package to prioritize candidate genes by integrating genome-wide association studies and gene coexpression networks
• Hybrid Genomic Analysis of Salmonella enterica Serovar Enteritidis SE3 Isolated from Polluted Soil in Brazil
• Impact of Whole-Genome and Tandem Duplications in the Expansion and Functional Diversification of the F-Box Family in Legumes (Fabaceae)
• Transcription factors, chromatin proteins and the diversification of Hemiptera
• A chemogenomic screen reveals novel Snf1p/AMPK independent regulators of acetyl-CoA carboxylase
• Synergy of Omeprazole and Praziquantel In Vitro Treatment against Schistosoma mansoni Adult Worms
• Evolutionary and biochemical aspects of chemical stress resistance in saccharomyces cerevisiae
• Exploring the complexity of soybean (Glycine max) transcriptional regulation using global gene co-expression networks
• Zika virus infection drives epigenetic modulation of immunity by the histone acetyltransferase CBP of Aedes aegypti
• Maternal or zygotic: Unveiling the secrets of the Pancrustacea transcription factor zelda
• Transcriptional landscape of soybean (Glycine max) embryonic axes during germination in the presence of paclobutrazol, a gibberellin biosynthesis inhibitor
• Genomic analysis unveils important aspects of population structure, virulence, and antimicrobial resistance in Klebsiella aerogenes
• Genomic analysis unveils important aspects of population structure, virulence, and antimicrobial resistance in Klebsiella aerogenes
• Polyploidization events shaped the transcription factor repertoires in legumes (Fabaceae)
• Systematic analysis of 1298 RNA‐Seq samples and construction of a comprehensive soybean ( Glycine max ) expression atlas
• Exploring the complexity of soybean (Glycine max) transcriptional regulation using global gene co-expression networks
• Phylogenetic and population structure analyses uncover pervasive misclassification and help assessing the biosafety of Pseudomonas alloputida for biotechnological applications
• Genome-Wide Analysis of the COBRA-Like Gene Family Supports Gene Expansion through Whole-Genome Duplication in Soybean (Glycine max)
• The state of the art in soybean transcriptomics resources and gene coexpression networks
• Pathogenesis-related protein 1 (PR-1) genes in soybean: genome-wide identification, structural analysis and expression profiling under multiple biotic and abiotic stresses
• BioNERO: an all-in-one R/Bioconductor package for comprehensive and easy biological network reconstruction
• cageminer: an R/Bioconductor package to prioritize candidate genes by integrating GWAS and gene coexpression networks
• Network analysis of ten thousand genomes shed light on Pseudomonas diversity and classification
• Schistosoma mansoni tegument protein Sm29 is able to induce a Th1-type of immune response and protection against parasite infection
• Identification of Albizia lebbeck seed coat chitin-binding vicilins (7S globulins) with high toxicity to the larvae of the bruchid Callosobruchus maculatus
• SmTRC1, a novel Schistosoma mansoni DNA transposon, discloses new families of animal and fungi transposons belonging to the CACTA superfamily
• Structural and Functional Characterization of the Protein Kinase Mps1 in Arabidopsis thaliana
• Reconstructing prokaryotic transcriptional regulatory networks: Lessons from actinobacteria
• Robustness and evolvability in natural chemical resistance: Identification of novel systems properties, biochemical mechanisms and regulatory interactions
• A protein with amino acid sequence homology to bovine insulin is present in the legume Vigna unguiculata (cowpea)
• The leaves of green plants as well as a cyanobacterium, a red alga, and fungi contain insulin-like antigens
• Apprehending multicellularity: Regulatory networks, genomics, and evolution
• The Aedes aegypti larval transcriptome: A comparative perspective with emphasis on trypsins and the domain structure of peritrophins
• Interference with hemozoin formation represents an important mechanism of schistosomicidal action of antimalarial quinoline methanols
• CYSTM, a novel cysteine-rich transmembrane module with a role in stress tolerance across eukaryotes
• Plant insulin or glucokinin: A conflicting issue
• Use of a 44k oligoarray to explore the transcriptome of Schistosoma mansoni adult worms
• Reconstructing the ubiquitin network - Cross-talk with other systems and identification of novel functions
• Genomics and gene expression management tools for the schistosoma mansoni cDNA microarray project
• New insights about host response to smallpox using microarray data
• Gender biased differential alternative splicing patterns of the transcriptional cofactor CA150 gene in Schistosoma mansoni
• Apprehending multicellularity: Regulatory networks, genomics and evolution (Birth Defects Research Part C - Embryo Today: Reviews (2009) 87, (143-164))
• Bursts of transposition from non-long terminal repeat retrotransposon families of the RTE clade in Schistosoma mansoni
• Identification of the Schistosoma mansoni TNF-alpha receptor gene and the effect of human TNF-alpha on the parasite gene expression profile
• Analysis of Schistosoma mansoni genes shared with Deuterostomia and with possible roles in host interactions
• Molecular correlates of experimental cerebral malaria detectable in whole blood
• High-confidence mapping of chemical compounds and protein complexes reveals novel aspects of chemical stress response in yeast
• The Soybean Expression Atlas v2: a comprehensive database of over 5000 RNA-seq samples
• Molecular Characterization of Salmonella Phage Wara Isolated from River Water in Brazil
• Systematic analysis of 1298 RNA‐Seq samples and construction of a comprehensive soybean (Glycine max) expression atlas
• The Soybean Expression Atlas v2: A comprehensive database of over 5000 RNA‐seq samples
• Comparative Genomics Reveals Novel Species and Insights into the Biotechnological Potential, Virulence, and Resistance of Alcaligenes
• Relating Ecological Diversity to Genetic Discontinuity across Bacterial Species
• Comparative metagenomic profiling of seed-borne microbiomes in a landrace and a hybrid maize variety