Stephen Turner

Assistant Professor & Bioinformatics Core Director
Charlottesville, VA
Assistant professor of Public Health Sciences, and Director of the Bioinformatics Core at the University of Virginia. Contact info at http://stephenturner.us.

Publications

  • F1000Prime Recommendation
  • Annotated Manhattan plots and QQ plots for GWAS using R, Revisited DOI: 10.1038/npre.2011.6070

Stephen's public data

collection
Collection Sexually dimorphic crosstalk at the maternal-fetal interface
Tianyanxin Sun
2020-06-20T01:01:20Z
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Optimizing Sensitivity and Validating the Illumina Infinium Assay for Genotyping of Forensically Relevant Sample Types for Investigative Lead Generation
David Russell
2020-02-11T21:17:48Z
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Mendelian simulation of STR genotypes from existing sample data to create standard truth pedigrees for benchmarking new familial inference methods
Stephen Turner
2019-06-11T19:39:07Z
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Assessing the Incidence of Plasmid-borne Resistance to Clinically-Significant Antibiotics in Stream Sediments
Curtis Kapsak
2016-06-19T14:15:25Z
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Tutorial: RNA-seq differential expression & pathway analysis with Sailfish, DESeq2, GAGE, and Pathview
Stephen Turner
2015-12-05T18:25:08Z
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MinION Sequencing of a captured Antibiotic Resistance Plasmid
Curtis Kapsak
2015-12-04T06:52:49Z
dataset
GSE37704 sample data
Stephen Turner
2015-11-13T19:54:37Z
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Nanopore Sequencing of Transmissible Tetracyline Plasmids Captured without Cultivation from Stream Sediment Reveals Linked Genes Encoding Resistance to Multiple Human Clinical Antibiotics
James Herrick
2015-10-07T19:59:33Z
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Nanopore + Ion Torrent sequencing, assembly, and annotation of culture-free streambed plasmids reveals hitchhiking genes for resistance to multiple human clinical antibiotics
Stephen Turner
2015-09-25T18:48:06Z
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RNA-seq workflows
Stephen Turner
2015-05-29T14:55:37Z
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RNA-seq workshop course materials 11/10/2014
Stephen Turner
2014-11-20T21:56:14Z
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Introduction to R Cheat Sheet
Stephen Turner
2014-06-24T17:44:43Z
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Characterization of the nasopharyngeal microbiome in health and during rhinovirus challenge
Emma Allen
2014-05-02T19:32:51Z
software
qqman
Stephen Turner
2014-03-17T12:25:15Z
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Bioinformatics Training Resources
Stephen Turner
2013-08-15T14:14:09Z
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Examining Gene Expression and Methylation with Next-Gen Sequencing
Stephen Turner
2013-06-25T14:31:32Z
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Bioinformatics Cores & New Technologies: The evolving role of 21st Century Bioinformatics Core Facilities
Stephen Turner
2013-06-13T12:32:53Z
dataset
96 to 384 well plate mapper
Stephen Turner
2013-04-23T15:39:33Z
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RNA-seq Workflows and Tools
Stephen Turner
2013-03-29T18:03:01Z
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Poster: Incorporating Domain Knowledge into Evolutionary Computing for Discovering Gene-Gene Interaction
Stephen Turner
2013-02-01T15:54:32Z
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Poster: Knowledge-driven multi-locus analysis reveals gene-gene interactions influencing HDL cholesterol level in two independent biobanks
Stephen Turner
2013-02-01T15:49:52Z
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Vanderbilt Human Genetics Quals Phase I Study Guide
Stephen Turner
2013-01-25T20:46:09Z
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Stop Hosting Data and Code on your Lab Website
Stephen Turner
2013-01-08T16:53:23Z
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Knowledge-Driven Genome-Wide Analysis of Multigenic Interactions Impacting HDL Cholesterol Level
Stephen Turner
2013-01-04T13:26:26Z
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Pathway Analysis: Adding Functional Context to High-Throughput Results
Stephen Turner
2012-12-20T15:13:35Z
dataset
Ensembl/Entrez hg19/GRCh37 Consensus Genes
Stephen Turner
2012-12-05T21:22:54Z