Stephen Turner

Assistant professor of Public Health Sciences, and Director of the Bioinformatics Core at the University of Virginia. Contact info at http://stephenturner.us.

Publications

F1000Prime Recommendation
Annotated Manhattan plots and QQ plots for GWAS using R, Revisited DOI: 10.1038/npre.2011.6070

Stephen's public data

Developmental Validation of the Illumina Infinium Assay using the Global Screening Array (GSA) on the iScan System for use in Forensic Laboratories

David Russell

2021-09-09T18:43:50Z

poster

Evaluation of Degraded Human DNA Samples Using the Illumina® Global Screening Array

David Russell

2021-01-22T20:00:33Z

collection

Collection Sexually dimorphic crosstalk at the maternal-fetal interface

Tianyanxin Sun

2020-06-20T01:01:20Z

Optimizing Sensitivity and Validating the Illumina Infinium Assay for Genotyping of Forensically Relevant Sample Types for Investigative Lead Generation

David Russell

2020-02-11T21:17:48Z

Mendelian simulation of STR genotypes from existing sample data to create standard truth pedigrees for benchmarking new familial inference methods

Stephen Turner

2019-06-11T19:39:07Z

Assessing the Incidence of Plasmid-borne Resistance to Clinically-Significant Antibiotics in Stream Sediments

Curtis Kapsak

2016-06-19T14:15:25Z

Tutorial: RNA-seq differential expression & pathway analysis with Sailfish, DESeq2, GAGE, and Pathview

Stephen Turner

2015-12-05T18:25:08Z

MinION Sequencing of a captured Antibiotic Resistance Plasmid

Curtis Kapsak

2015-12-04T06:52:49Z

dataset

GSE37704 sample data

Stephen Turner

2015-11-13T19:54:37Z

Nanopore Sequencing of Transmissible Tetracyline Plasmids Captured without Cultivation from Stream Sediment Reveals Linked Genes Encoding Resistance to Multiple Human Clinical Antibiotics

James Herrick

2015-10-07T19:59:33Z

Nanopore + Ion Torrent sequencing, assembly, and annotation of culture-free streambed plasmids reveals hitchhiking genes for resistance to multiple human clinical antibiotics

Stephen Turner

2015-09-25T18:48:06Z

RNA-seq workflows

Stephen Turner

2015-05-29T14:55:37Z

RNA-seq workshop course materials 11/10/2014

Stephen Turner

2014-11-20T21:56:14Z

Introduction to R Cheat Sheet

Stephen Turner

2014-06-24T17:44:43Z

Characterization of the nasopharyngeal microbiome in health and during rhinovirus challenge

Emma Allen

2014-05-02T19:32:51Z

software

qqman

Stephen Turner

2014-03-17T12:25:15Z

Bioinformatics Training Resources

Stephen Turner

2013-08-15T14:14:09Z

Examining Gene Expression and Methylation with Next-Gen Sequencing

Stephen Turner

2013-06-25T14:31:32Z

Bioinformatics Cores & New Technologies: The evolving role of 21st Century Bioinformatics Core Facilities

Stephen Turner

2013-06-13T12:32:53Z

dataset

96 to 384 well plate mapper

Stephen Turner

2013-04-23T15:39:33Z

RNA-seq Workflows and Tools

Stephen Turner

2013-03-29T18:03:01Z

Poster: Incorporating Domain Knowledge into Evolutionary Computing for Discovering Gene-Gene Interaction

Stephen Turner

2013-02-01T15:54:32Z

Poster: Knowledge-driven multi-locus analysis reveals gene-gene interactions influencing HDL cholesterol level in two independent biobanks

Stephen Turner

2013-02-01T15:49:52Z

Vanderbilt Human Genetics Quals Phase I Study Guide

Stephen Turner

2013-01-25T20:46:09Z

Stop Hosting Data and Code on your Lab Website

Stephen Turner

2013-01-08T16:53:23Z

Knowledge-Driven Genome-Wide Analysis of Multigenic Interactions Impacting HDL Cholesterol Level

Stephen Turner

2013-01-04T13:26:26Z

Pathway Analysis: Adding Functional Context to High-Throughput Results

Stephen Turner

2012-12-20T15:13:35Z

dataset

Ensembl/Entrez hg19/GRCh37 Consensus Genes

Stephen Turner

2012-12-05T21:22:54Z