Stephen Turner

Assistant Professor & Bioinformatics Core Director
Charlottesville, VA
Assistant professor of Public Health Sciences, and Director of the Bioinformatics Core at the University of Virginia. Contact info at http://stephenturner.us.

Publications

  • F1000Prime Recommendation
  • Annotated Manhattan plots and QQ plots for GWAS using R, Revisited DOI: 10.1038/npre.2011.6070

Stephen's public data

Assessing the Incidence of Plasmid-borne Resistance to Clinically-Significant Antibiotics in Stream Sediments
Curtis Kapsak
2016-06-19T14:15:25Z
Tutorial: RNA-seq differential expression & pathway analysis with Sailfish, DESeq2, GAGE, and Pathview
Stephen Turner
2015-12-05T18:25:08Z
MinION Sequencing of a captured Antibiotic Resistance Plasmid
Curtis Kapsak
2015-12-04T06:52:49Z
Fileset
GSE37704 sample data
Stephen Turner
2015-11-13T19:54:37Z
Nanopore Sequencing of Transmissible Tetracyline Plasmids Captured without Cultivation from Stream Sediment Reveals Linked Genes Encoding Resistance to Multiple Human Clinical Antibiotics
James Herrick
2015-10-07T19:59:33Z
Nanopore + Ion Torrent sequencing, assembly, and annotation of culture-free streambed plasmids reveals hitchhiking genes for resistance to multiple human clinical antibiotics
Stephen Turner
2015-09-25T18:48:06Z
RNA-seq workflows
Stephen Turner
2015-05-29T14:55:37Z
RNA-seq workshop course materials 11/10/2014
Stephen Turner
2014-11-20T21:56:14Z
dead
Stephen Turner
2014-11-20T21:47:32Z
Introduction to R Cheat Sheet
Stephen Turner
2014-06-24T17:44:43Z
Characterization of the nasopharyngeal microbiome in health and during rhinovirus challenge
Emma Allen
2014-05-02T19:32:51Z
Code
qqman
Stephen Turner
2014-03-17T12:25:15Z
Examining Gene Expression and Methylation with Next-Gen Sequencing
Stephen Turner
2013-06-25T14:31:32Z
Bioinformatics Cores & New Technologies: The evolving role of 21st Century Bioinformatics Core Facilities
Stephen Turner
2013-06-13T12:32:53Z
Dataset
96 to 384 well plate mapper
Stephen Turner
2013-04-23T15:39:33Z
RNA-seq Workflows and Tools
Stephen Turner
2013-03-29T18:03:01Z
Poster: Incorporating Domain Knowledge into Evolutionary Computing for Discovering Gene-Gene Interaction
Stephen Turner
2013-02-01T15:54:32Z
Vanderbilt Human Genetics Quals Phase I Study Guide
Stephen Turner
2013-01-25T20:46:09Z
Stop Hosting Data and Code on your Lab Website
Stephen Turner
2013-01-08T16:53:23Z
Knowledge-Driven Genome-Wide Analysis of Multigenic Interactions Impacting HDL Cholesterol Level
Stephen Turner
2013-01-04T13:26:26Z
Pathway Analysis: Adding Functional Context to High-Throughput Results
Stephen Turner
2012-12-20T15:13:35Z
Fileset
Ensembl/Entrez hg19/GRCh37 Consensus Genes
Stephen Turner
2012-12-05T21:22:54Z
Predicting Total, Abdominal, Visceral and Hepatic Adiposity with Circulating Biomarkers in Caucasian and Japanese American Women
Stephen Turner
2012-08-17T00:16:29Z
collection
Predicting Total, Abdominal, Visceral and Hepatic Adiposity with Circulating Biomarkers in Caucasian and Japanese American Women
Stephen Turner
2012-08-17T00:16:29Z
collection
Knowledge-Driven Multi-Locus Analysis Reveals Gene-Gene Interactions Influencing HDL Cholesterol Level in Two Independent EMR-Linked Biobanks
Stephen Turner
2011-05-11T01:54:40Z
Knowledge-Driven Multi-Locus Analysis Reveals Gene-Gene Interactions Influencing HDL Cholesterol Level in Two Independent EMR-Linked Biobanks
Stephen Turner
2011-05-11T01:54:40Z
A General Framework for Formal Tests of Interaction after Exhaustive Search Methods with Applications to MDR and MDR-PDT
Todd L. Edwards
2010-02-23T01:14:54Z
collection
A General Framework for Formal Tests of Interaction after Exhaustive Search Methods with Applications to MDR and MDR-PDT
Todd L. Edwards
2010-02-23T01:14:54Z