Scott Olesen

Publications

• Searching for superstool: maximizing the therapeutic potential of FMT
• Azithromycin Susceptibility Among Neisseria gonorrhoeae Isolates and Seasonal Macrolide Use
• The distribution of antibiotic use and its association with antibiotic resistance
• Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora
• The role of “spillover” in antibiotic resistance
• Response to comment on 'The distribution of antibiotic use and its association with antibiotic resistance'
• Cumulative Probability of Receiving an Antibiotic Prescription over Time
• Morphological analysis of chiral rod clusters from a coarse-grained single-site chiral potential
• Case-based surveillance of antimicrobial resistance with full susceptibility profiles
• 16S rRNA sequencing analysis: the devil is in the details
• A Novel Analysis Method for Paired-Sample Microbial Ecology Experiments
• Surveys, simulation and single-cell assays relate function and phylogeny in a lake ecosystem
• dbOTU3: A new implementation of distribution-based OTU calling
• Designing fecal microbiota transplant trials that account for differences in donor stool efficacy
• Single molecules reveal the dynamics of heterogeneities in a polymer at the glass transition
• A left-handed building block self-assembles into right- and left-handed helices
• Natural Bacterial Communities Serve as Quantitative Geochemical Biosensors
• Dysbiosis is not an answer
• Salt-responsive gut commensal modulates TH17 axis and disease
• Trends in outpatient antibiotic use and prescribing practice among US older adults, 2011-15: observational study
• Re-Evaluating the Evidence for Faecal Microbiota Transplantation ‘Super-Donors’ in Inflammatory Bowel Disease
• Shiga Toxin–Producing Escherichia coli Transmission via Fecal Microbiota Transplant
• Modeling Donor Screening Strategies to Reduce the Risk of Severe Acute Respiratory Syndrome Coronavirus 2 Transmission via Fecal Microbiota Transplantation
• Fecal Microbiota Transplantation “Donor Effects” Are Not Clinically Relevant for Clostridioides difficile Infection
• 16S rRNA sequencing of samples from universal stool bank donors
• Viral dynamics of acute SARS-CoV-2 infection and applications to diagnostic and public health strategies
• Wastewater network infrastructure in public health: Applications and learnings from the COVID-19 pandemic
• Analysis of multiple bacterial species and antibiotic classes reveals large variation in the association between seasonal antibiotic use and resistance
• Infectious Disease Modeling: Recommendations for Public Health Decision-Makers
• Uses of mathematical modeling to estimate the impact of mass drug administration of antibiotics on antimicrobial resistance within and between communities
• A conserved Bacteroidetes antigen induces anti-inflammatory intestinal T lymphocytes
• Assessment of sewer connectivity in the United States and its implications for equity in wastewater-based epidemiology