Ryan Miller

Publications

• An exploration of within-herd dynamics of a transboundary livestock disease: A foot and mouth disease case study
• CameraTrapDetectoR: Automatically detect, classify, and count animals in camera trap images using artificial intelligence
• Transient population dynamics drive the spread of invasive wild pigs in North America
• Areas within the United States at the Highest Risk for African Swine Fever, Classical Swine Fever, and Foot-and-Mouth Disease Introduction
• Effects of regional differences and demography in modelling foot-and-mouth disease in cattle at the national scale
• Machine learning to classify animal species in camera trap images: Applications in ecology
• Modeling nation-wide U.S. swine movement networks at the resolution of the individual premises
• A Rapid Population Assessment Method for Wild Pigs Using Baited Cameras at 3 Study Sites
• Transmission of antibiotic resistance at the wildlife-livestock interface
• Optimal spatial prioritization of control resources for elimination of invasive species under demographic uncertainty
• Adaptive risk-based targeted surveillance for foreign animal diseases at the wildlife-livestock interface
• Improving the accessibility and transferability of machine learning algorithms for identification of animals in camera trap images: MLWIC2
• Improving the accessibility and transferability of machine learning algorithms for identification of animals in camera trap images: mlwic2
• A framework for surveillance of emerging pathogens at the human-animal interface: Pigs and coronaviruses as a case study
• Optimising response to an introduction of African swine fever in wild pigs
• Habitat quality influences trade-offs in animal movement along the exploration–exploitation continuum
• Mixed ancestry from wild and domestic lineages contributes to the rapid expansion of invasive feral swine
• Loci Associated With Antibody Response in Feral Swine (Sus scrofa) Infected With Brucella suis
• Disease Progression and Serological Assay Performance in Heritage Breed Pigs following Brucella suis Experimental Challenge as a Model for Naturally Infected Feral Swine
• A model for leveraging animal movement to understand spatio-temporal disease dynamics
• Realistic assumptions about spatial locations and clustering of premises matter for models of foot-and-mouth disease spread in the United States
• Modeling U.S. cattle movements until the cows come home: Who ships to whom and how many?
• Habitat quality influences trade-offs in animal movement along the exploration-exploitation continuum
• Summer habitat use and movements of invasive wild pigs (Sus scrofa) in Canadian agro-ecosystems
• Quantifying biodiversity impacts of livestock using life-cycle perspectives
• Seasonal Variation in Space Use and Territoriality in an Invasive Large Mammal (Sus Scrofa)
• Predicting functional responses in agro-ecosystems from animal movement data to improve management of invasive pests
• Seasonal variation in space use and territoriality in a large mammal (Sus scrofa)
• Spatial variation in direct and indirect contact rates at the wildlife-livestock interface for informing disease management
• Risks of introduction and economic consequences associated with African swine fever, classical swine fever and foot-and-mouth disease: A review of the literature
• Role of social structure in establishment of an invasive large mammal after translocation
• Assessing intrastate shipments from interstate data and expert opinion
• Effects of social structure and management on risk of disease establishment in wild pigs
• Deriving spatially explicit direct and indirect interaction networks from animal movement data
• Spatio-temporal patterns and characteristics of swine shipments in the U.S. based on Interstate Certificates of Veterinary Inspection
• Transient population dynamics drive the spread of invasive wild pigs in North America
• Torque Teno Sus Virus 1: A Potential Surrogate Pathogen to Study Pig-Transmitted Transboundary Animal Diseases
• Transient population dynamics drive the spread of invasive wild pigs and reveal impacts of management in North America
• Individual-level patterns of resource selection do not predict hotspots of contact
• The Importance of Livestock Demography and Infrastructure in Driving Foot and Mouth Disease Dynamics
• Continental‐scale dynamics of avian influenza in U.S. waterfowl are driven by demography, migration, and temperature
• Deriving spatially explicit direct and indirect interaction networks from animal movement data
• Comparison of daily activity patterns across seasons using GPS telemetry and camera trap data for a widespread mammal
• Estimating and exploring the proportions of inter- and intrastate cattle shipments in the United States
• Risk factors and productivity losses associated with Mycoplasma ovipneumoniae infection in United States domestic sheep operations
• BOARD INVITED REVIEW: Prospects for improving management of animal disease introductions using disease-dynamic models
• Detection error influences both temporal seroprevalence predictions and risk factors associations in wildlife disease models
• rapidPop: Rapid population assessments of wildlife using camera trap data in R Shiny Applications
• Agricultural and Ecological Resources Safeguarded by the Prevention of Wild Pig Population Expansion
• Collaborative Adaptive Management in the Greater Yellowstone Ecosystem: A Rangeland Living Laboratory at the US Sheep Experiment Station
• Cross-species transmission potential between wild pigs, livestock, poultry, wildlife, and humans: implications for disease risk management in North America
• Antibody evidence of porcine reproductive and respiratory syndrome virus detected in sera collected from feral swine (Sus scrofa) across the United States
• Predation and disease-related economic impacts of wild pigs on livestock producers in 13 states
• Biotic and abiotic factors predicting the global distribution and population density of an invasive large mammal
• Optimal spatial prioritization of control resources for elimination of invasive species under demographic uncertainty
• Epidemic Growth Rates and Host Movement Patterns Shape Management Performance for Pathogen Spillover at The Wildlife-livestock Interface
• Determinants of invasive species policy: Print media and agriculture determine U.S. invasive wild pig policy
• Epidemic growth rates and host movement patterns shape management performance for pathogen spillover at the wildlife-livestock interface
• Limited antibody evidence of exposure to Mycobacterium Bovis in feral swine (Sus scrofa) in the USA
• Anthropogenic factors predict movement of an invasive species
• Accounting for heterogeneous invasion rates reveals management impacts on the spatial expansion of an invasive species
• Inferring infection hazard in wildlife populations by linking data across individual and population scales
• Predicting the initial spread of novel Asian origin influenza A viruses in the continental USA by wild waterfowl
• Abiotic and biotic influences on home-range size of wild pigs (Sus scrofa)
• Wild pigs breach farm fence through harvest time in southern San Joaquin Valley: Camera traps recorded 860 wild pig encounters at Laval Farms during the harvest season for grapes and pistachios, most of them at night
• Model-guided suggestions for targeted surveillance based on cattle shipments in the U.S.
• Machine learning to classify animal species in camera trap images: Applications in ecology
• Historical, current, and potential population size estimates of invasive wild pigs (Sus scrofa) in the United States
• Identification of migratory bird flyways in North America using community detection on biological networks
• Characteristics of white-tailed deer visits to cattle farms: Implications for disease transmission at the wildlife-livestock interface
• The impact of movements and animal density on continental scale cattle disease outbreaks in the United States
• Epidemiologic characterization of colorado backyard bird flocks
• Assessment of paper interstate certificates of veterinary inspection used to support disease tracing in cattle
• A globally-distributed alien invasive species poses risks to United States imperiled species
• Propagule size and structure, life history, and environmental conditions affect establishment success of an invasive species
• Publisher Correction: A globally-distributed alien invasive species poses risks to United States imperiled species
• A Bayesian Approach for Modeling Cattle Movements in the United States: Scaling up a Partially Observed Network
• Diseases at the livestock-wildlife interface: Status, challenges, and opportunities in the United States
• Recognition of the threat of ehrlichia ruminantium infection in domestic and wild ruminants in the continental united states
• Environmental and demographic determinants of avian influenza viruses in waterfowl across the contiguous United States
• Human-bird interactions in the United States upland gamebird industry and the potential for zoonotic disease transmission
• One health approach to identify research needs in bovine and human babesioses: Workshop report
• Developing a research agenda and a comprehensive national prevention and response plan for rift valley fever in the United States
• Linkage of the California Pesticide Use Reporting Database with spatial land use data for exposure assessment
• Serologic evidence of widespread everglades virus activity in dogs, Florida
• Identifying populations potentially exposed to agricultural pesticides using remote sensing and a geographic information system
• Modeling and mapping the probability of occurrence of invasive wild pigs across the contiguous United States
• Using quantitative disease dynamics as a tool for guiding response to avian influenza in poultry in the United States of America
• A benefit-cost analysis decision framework for mitigation of disease transmission at the wildlife-livestock interface
• Sources of bovine tuberculosis in the United States
• Mycobacterium bovis (bovine tuberculosis) infection in North American wildlife: Current status and opportunities for mitigation of risks of further infection in wildlife populations
• A national-scale picture of U.S. cattle movements obtained from Interstate Certificate of Veterinary Inspection data
• Widespread detection of highly pathogenic H5 influenza viruses in wild birds from the Pacific Flyway of the United States
• Mapping U.S. cattle shipment networks: Spatial and temporal patterns of trade communities from 2009 to 2011
• Simulating the distribution of individual livestock farms and their populations in the United States: An example using domestic swine (Susscrofa domesticus) farms
• Potential Intercontinental Movement of Influenza A(H7N9) Virus into North America by Wild Birds: Application of a Rapid Assessment Framework
• Inferring invasive species abundance using removal data from management actions
• “One Health” or Three? Publication Silos Among the One Health Disciplines
• Determinants of invasive species policy: print media and agriculture determine United States invasive wild pig policy