Ryan Godwin

Publications

• R. C. Godwin, L. M. Macnamara, R. W. Alexander, and F. R. Salsbury Jr., “Structure and Dynamics of tRNAMet Containing Core Substitutions”. ACS Omega, (2018)
• R. L. Melvin, J. Xiao, K. S. Berenhaut, R. C. Godwin, F. R. Salsbury Jr., “Using Correlated Motions to Determine Sufficient Sampling Times for Molec- ular Dynamics”. Physical Reviews E, (2018)
• R. L. Melvin, J. Xiao, R. C. Godwin, K. S. Berenhaut, and F. R., Salsbury Jr. “Visualizing Correlated Motion with HDBSCAN Clustering”. Protein Science: Special Issue on Tools for Protein Science, (2018).
• R. C. Godwin, W. H. Gmeiner, F. R. Salsbury Jr., “All–Atom Molecular Dy- namics Comparison of Disease-Associated Zinc Fingers”. Journal of Biomolec- ular Structure and Dynamics, (2017).
• R. L. Melvin, W. G. Thompson, R. C. Godwin, W. H. Gmeiner, and F. R., Salsbury Jr. “Allosteric Reaction Across Multiple Domains Differentiate MutSα’s Response to Three Types of DNA Damage as Revealed by Machine Learning”. frontiers in Physics, (2017).
• R. C. Godwin, R. L. Melvin, W. H. Gmeiner, and F. R. Salsbury Jr., “Binding Site Configurations Probe Structure and Dynamics of the Zinc-finger NEMO”, Biochemistry, (2016).
• R. L. Melvin, R. C. Godwin, J. J. Xiao, W. G. Thompson, K. S. Berenhaut, and F. R. Salsbury Jr., “Uncovering Large-Scale Conformational Change in Molecular Dynamics without Prior Knowledge”, Journal of Chemical Theory and Computation, (2016).
• R. C. Godwin, W. H. Gmeiner, F. R. Salsbury Jr., “Importance of Long– Time Simulations for Rare Event Sampling in Zinc Finger Proteins”, Journal of Biomolecular Structure and Dynamics, (2015).
• R. C. Godwin1, R. L. Melvin1, F. R. Salsbury Jr., “Molecular Dynamics Simulations and Computer-Aided Drug Discovery”, Methods in Pharmacology and Toxicology, (2015).
• P. J. Lotz, M. Lacasse, R.C. Godwin, “Discovery Channel Telescope Soft- ware Component Template and State Design: Principles and Implementation”, SPIE, (2012).
• P. J. Lotz, D. Greenspan, R. C. Godwin, “Discovery Channel Telescope Soft- ware Development Overview”, SPIE, (2010).
• R. C. Godwin, R. D. Young, “Fast Folding Proteins: Analysis Based on the Energy Landscape and Transition State Ensemble”, Masters Thesis, NAU, (2008).