Rhys Parry

Publications

• Identification and RNAi Profile of a Novel Iflavirus Infecting Senegalese Aedes vexans arabiensis Mosquitoes
• Wolbachia endosymbiont of the horn fly Haematobia irritans irritans: a supergroup A strain with multiple horizontally acquired cytoplasmic incompatibility genes.
• Structural analysis of 3’UTRs in insect flaviviruses reveals novel determinant of sfRNA biogenesis and provides new insights into flavivirus evolution
• Human blood microRNA hsa-miR-21-5p induces vitellogenin in the mosquito Aedes aegypti
• Density-dependent enhanced replication of a densovirus in Wolbachia-infected Aedes cells is associated with production of piRNAs and higher virus-derived siRNAs
• Upregulation of Aedes aegypti Vago1 by Wolbachia and its effect on dengue virus replication
• Mapping the virome in wild-caught Aedes aegypti from Cairns and Bangkok
• Discovery of novel crustacean and cephalopod flaviviruses: insights into evolution and circulation of flaviviruses between marine invertebrate and vertebrate hosts.
• Effect of Wolbachia wAlbB on a positive-sense RNA negev-like virus: a novel virus persistently infecting Aedes albopictus mosquitoes and cells
• Viral CpG deficiency provides no evidence that dogs were intermediate hosts for SARS-CoV-2.
• Divergent Influenza-Like Viruses of Amphibians and Fish Support an Ancient Evolutionary Association
• Sequencing of Historical Isolates, K-mer Mining and High Serological Cross-Reactivity with Ross River Virus Argue against the Presence of Getah Virus in Australia
• Transcription Profile and Genomic Variations of Oryctes Rhinoceros Nudivirus in Coconut Rhinoceros Beetles
• A versatile reverse genetics platform for SARS-CoV-2 and other positive-strand RNA viruses
• A 1958 Isolate of Kedougou Virus (KEDV) from Ndumu, South Africa, Expands the Geographic and Temporal Range of KEDV in Africa
• Uncovering the Worldwide Diversity and Evolution of the Virome of the Mosquitoes Aedes aegypti and Aedes albopictus
• Aedes Anphevirus: an Insect-Specific Virus Distributed Worldwide in Aedes aegypti Mosquitoes That Has Complex Interplays with Wolbachia and Dengue Virus Infection in Cells
• Endosymbionts and viromes: interplays between Wolbachia pipientis and the virome of Aedes mosquitoes
• Persistent Spodoptera frugiperda rhabdovirus infection in Sf9 cells is not restricted by Wolbachia wMelPop-CLA and wAlbB strains and is targeted by the RNAi machinery
• Comparative analysis of genome-encoded viral sequences reveals the evolutionary history of the Flaviviridae
• Mutational analysis of Aedes aegypti Dicer 2 provides insights into the biogenesis of antiviral exogenous small interfering RNAs
• Structural analysis of 3’UTRs in insect flaviviruses reveals novel determinants of sfRNA biogenesis and provides new insights into flavivirus evolution
• No evidence of SARS-CoV-2 reverse transcription and integration as the origin of chimeric transcripts in patient tissues
• Comparative analysis of genome-encoded viral sequences reveals the evolutionary history of flavivirids (family Flaviviridae).
• Comparative analysis of genome-encoded viral sequences reveals the evolutionary history of flavivirids (family Flaviviridae)
• Reporter Flaviviruses as Tools to Demonstrate Homologous and Heterologous Superinfection Exclusion
• Divergent influenza-like viruses of amphibians and fish support an ancient evolutionary association
• Genomic structural and transcriptional variation of Oryctes rhinoceros nudivirus (OrNV) in Coconut Rhinoceros Beetle
• Density dependent enhancement effect of Wolbachia and the host RNAi response to a densovirus in Aedes cells
• Aedes anphevirus (AeAV): An insect-specific virus distributed worldwide in Aedes aegypti mosquitoes that has complex interplays with Wolbachia and dengue virus infection in cells
• SARS-CoV-2 drives NLRP3 inflammasome activation in human microglia through spike-ACE2 receptor interaction
• The Troublesome Ticks Research Protocol: Developing a Comprehensive, Multidiscipline Research Plan for Investigating Human Tick-Associated Disease in Australia
• SARS-CoV-2 drives NLRP3 inflammasome activation in human microglia through spike protein
• The role ofN-glycosylation in spike antigenicity for the SARS-CoV-2 Gamma variant
• A novel tamanavirus (Flaviviridae) of the European common frog (Rana temporaria) encodes a divergent class 1b XRN1-resistant RNA element.
• A novel tamanavirus (Flaviviridae) of the European common frog (Rana temporaria) encodes a divergent class 1b XRN1-resistant RNA element
• Increased neurovirulence of omicron BA.5 and XBB variants over BA.1 in K18-hACE2 mice and human brain organoids
• TMPRSS2 activation of Omicron lineage Spike glycoproteins is regulated by TMPRSS2 cleavage of ACE2
• Evidence for an ancient aquatic origin of the RNA viral order Articulavirales
• Identification of a novel papillomavirus from a New Zealand fur seal (Arctocephalus forsteri) with oral papilloma-like lesions
• The role of N-glycosylation in spike antigenicity for the SARS-CoV-2 Gamma variant
• A novel tamanavirus (Flaviviridae) of the European common frog (Rana temporaria) from the UK
• Xinyang flavivirus, from Haemaphysalis flava ticks in Henan Province, China, defines a basal, likely tick-only Orthoflavivirus clade
• The RNA interference response to alphanodavirus replication in Phlebotomus papatasi sand fly cells
• The PAZ domain of Aedes aegypti Dicer 2 is critical for accurate and high-fidelity size determination of virus-derived small interfering RNAs.
• The PAZ domain ofAedes aegyptiDicer 2 is critical for accurate and high-fidelity size determination of virus-derived small interfering RNAs
• A ~40-kb flavi-like virus does not encode a known error-correcting mechanism
• Detection of Dengue Virus 1 and Mammalian Orthoreovirus 3, with Novel Reassortments, in a South African Family Returning from Thailand, 2017
• Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts
• No evidence that mutations in SARS-CoV-2 variants of concern derive from homologous fragments in gut microbiota
• Vaccine-induced and hybrid immunity against SARS-CoV-2 variants of concern in two cohorts in Queensland, Australia (2021-2022).
• Vaccine-induced and hybrid immunity against SARS-CoV-2 variants of concern in two cohorts in Queensland, Australia (2021-2022)
• Tunicate metatranscriptomes reveal ancient virus-host co-divergence and inter-order recombination in the evolutionary history of disease-causing viruses
• The fluid genomic organisation of jingmenviruses
• Dicer-2 mutations in Aedes aegypti cells lead to a diminished antiviral function against Rift Valley fever virus and Bunyamwera virus infection
• Henipavirus in Northern Short-Tailed Shrew, Alabama, USA
• Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”
• Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”
• Statement in Support of: “Virology under the Microscope—a Call for Rational Discourse”
• Skin patch delivery of a SARS-CoV-2 spike DNA vaccine produces broad neutralising antibody responses
• Multiple novel caliciviruses identified from stoats (Mustela erminea) in the United Kingdom
• Synthetic recovery of Yada Yada virus expands insect-specific alphavirus knowledge and facilitates production of chimeric viruses
• A novel papillomavirus in a New Zealand fur seal (Arctocephalus forsteri) with oral lesions
• Egg protein profile and dynamics during embryogenesis in Haemaphysalis flava ticks
• A protective bispecific antibody targets both Nipah virus surface glycoproteins and limits viral escape
• Global transcriptional reprogramming by cytomegalovirus infection suppresses antigen presentation while enhancing migration machinery in murine dendritic cells.
• Global transcriptional reprogramming by cytomegalovirus infection suppresses antigen presentation while enhancing migration machinery in murine dendritic cells
• Discovery of additional genomic segments reveals the fluidity of jingmenvirus genomic organisation
• Discovery of additional genomic segments reveals the fluidity of jingmenvirus genomic organization