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Nam V. Hoang

Plant genomics biologist (Biological sciences)

The Netherlands

Publications

  • Oxidative stress response and programmed cell death guided by NAC013 modulate pithiness in radish taproots
  • The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae
  • Gynandropsis gynandra genome assembly v2.0 - Hoang et al., 2023. Plant Cell. https://doi.org/10.1093/plcell/koad018
  • Phylogenetic analyses - Supplemental Data - Hoang et al., 2023. Plant Cell. https://doi.org/10.1093/plcell/koad018
  • Gynandropsis gynandra genome assembly v1.0 - Hoang et al., 2023. Plant Cell. https://doi.org/10.1093/plcell/koad018
  • Root transcriptome analysis of Saccharum spontaneum uncovers key genes and pathways in response to low-temperature stress
  • Gene Regulatory Network Guided Investigations and Engineering of Storage Root Development in Root Crops
  • Deep sequencing of suppression subtractive library identifies differentially expressed transcripts of Saccharum spontaneum exposed to salinity stress
  • High-Throughput Profiling of the Fiber and Sugar Composition of Sugarcane Biomass
  • Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)
  • Identification of conserved gene regulatory networks that integrate environmental sensing and growth in the root cambium
  • Analysis of the diversity and tissue specificity of sucrose synthase genes in the long read transcriptome of sugarcane
  • The Impact of cDNA Normalization on Long-Read Sequencing of a Complex Transcriptome
  • Potential for Genetic Improvement of Sugarcane as a Source of Biomass for Biofuels
  • Sugarcane Illumina RNA-Seq transcriptome
  • A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing
  • Filter_reads from Illumina RNA-Seq of sugarcane progenitors
  • Association of variation in the sugarcane transcriptome with sugar content
  • Iso-Seq Long Read Transcriptome Sequencing
  • Variation in sugarcane biomass composition and enzymatic saccharification of leaves, internodes and roots
  • Transcriptome of Sugarcane, a Highly Complex Polyploid
  • The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae.
  • Gynandropsis gynandra genome assembly v3.0 - Hoang et al., 2023. Plant Cell. https://doi.org/10.1093/plcell/koad018
  • Transcriptome analysis highlights key differentially expressed genes involved in cellulose and lignin biosynthesis of sugarcane genotypes varying in fiber content
  • Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids)
  • Identification of genes associated with the regulation of cold tolerance and the RNA movement in the grafted apple
  • Next generation sequencing of total DNA from sugarcane provides no evidence for chloroplast heteroplasmy
  • Modifying plants for biofuel and biomaterial production
  • Sugarcane PacBio Iso-Seq Transcriptome
  • The Sugarcane Chloroplast Genome: A Next Generation Sequencing Perspective
  • International Plant and Animal Genome Conference XXIV poster
  • Annotated Sugarcane PacBio Iso-Seq Transcriptome
  • A genomic panel for studying C3‐C4 intermediate photosynthesis in the Brassiceae tribe
  • Functional copy number variation in SQUALENE EPOXIDASE-LIKE genes affects photosystem II efficiency in Arabidopsis
  • Identification of Conserved Gene-Regulatory Networks that Integrate Environmental Sensing and Growth in the Root Cambium
  • The genome of Gynandropsis gynandra provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae
  • Association of gene expression with biomass content and composition in sugarcane
  • De novo assembly and characterizing of the culm-derived meta-transcriptome from the polyploid sugarcane genome based on coding transcripts
  • The Challenge of Analyzing the Sugarcane Genome
  • An Optimized Protocol of Laser Capture Microdissection for Tissue-Specific RNA Profiling in a Radish Tap Root

Nam V. Hoang's public data