Mohammad Ali Nilforooshan

Publications

• A review of the validation of national genomic evaluations
• ggroups: Pedigree and Genetic Groups
• Comparison of Holstein bull semen sources on milk traits in Isfahan province in Iran
• A study on some physical attributes of Naeini sheep wool for textile industry
• Effects of missing pedigree information on dairy cattle genetic evaluations (short communication)
• Wool characteristics of Bakhtiari sheep and the correlated responses to selection for pre-weaning daily gain
• Application of a multiple-trait, multiple-country genetic evaluation model for female fertility traits
• Effect of age at first calving on some productive and longevity traits in Iranian Holsteins of the Isfahan province
• Prediction of second parity milk performance of dairy cows from first parity information using artificial neural network and multiple linear regression methods
• Contemporary grouping in mixed-size dairy herds experiencing four seasons
• Wool fiber quality of Naeini sheep
• Estimation of direct genetic and maternal effects for production traits of Iranian Holstein cows using different animal models
• Prediction of second parity milk yield and fat percentage of dairy cows based on first parity information using neural network system
• mbend: an R package for bending non-positive-definite symmetric matrices to positive-definite
• Multiple-trait multiple-country genetic evaluation of Holstein bulls for female fertility and milk production traits
• Short communication: Quantifying bias in a single-trait international model ignoring covariances from multiple-trait national models
• Alternative Ways of Computing the Numerator Relationship Matrix
• Interbeef presents new opportunities for beef farmers
• Various statistical models for prediction of SNP effects from a multi-national/breed reference population
• International genetic evaluations of fertility traits considering more than one trait per country
• Developing the method of estimating genetic similarity between populations
• Benefits of Interbeef International Genetic Evaluations for Weaning Weight
• Code & data — Further improvement of bending performance for conditioning covariance matrices
• Code – A new computational approach to Henderson’s method for computing the inverse of a numerator relationship matrix
• Twenty simulated pedigrees with different combinations of three parameters using R package pedSimulate
• mbend: Data, Code & Results
• Benchmarking matrix self-cross-products, using R and Python functions
• Code & Data — Alternative Ways of Computing the Numerator Relationship Matrix
• R examples — Reduced Animal Models Fitting Only Equations for Phenotyped Animals
• Multiple-trait Multiple Country Genetic Evaluation of Fertility Traits in Dairy Cattle
• pedSimulate: Pedigree, Genetic Merit, Phenotype, and Genotype Simulation
• The quality of the algorithm for proven and young with various sets of core animals in a multibreed sheep population1
• Updating genetic relationship matrices and their inverses: a methodology note
• mbend: Matrix Bending
• Animal-specific combining of the GRM and the NRM in single-step GBLUP
• Across-Country Genetic Parameters in Beef Cattle for Interbeef Weaning Weight Genetic Evaluation
• Memory-efficient self-cross-product for large matrices using R and Python
• ggroups: an R package for pedigree and genetic groups data
• Effect of the size of the reference population on the validation reliability of national genomic evaluations
• International genetic evaluations for female fertility traits using multi-trait MACE
• Validation of national genomic evaluations
• MT–MACE for female fertility and milk yield
• Genomic Evaluation of BSW Populations. InterGenomics: Results and Deliverables
• Application of single-step GBLUP in New Zealand Romney sheep
• Reduced Animal Models Fitting Only Equations for Phenotyped Animals
• Genetic Evaluation and Comparison between Domestic and Imported (Canada, USA, Europe) Sperms for Milk Yield, Fat Yield, and Fat Percentage in Some Dairy Farms of Isfahan Province
• Genomic evaluations for crossbreed dairy cattle
• Efecto de dos estrategias de agrupación de padres fantasmas en la evaluación genética de rasgos de crecimiento en el ganado Braunvieh mexicano
• Invited review: A quarter of a century—International genetic evaluation of dairy sires using MACE methodology
• A new computational approach to Henderson’s method of computing the inverse of a numerator relationship matrix
• Genomic evaluations of sheep in New Zealand
• Compensating for the increase in the sum of eigenvalues and monitoring the bending performance for conditioning covariance matrices in multi-trait livestock evaluations
• Technical note: Extension of the reduced animal model to single-step methods
• pedSimulate – An R package for simulating pedigree, genetic merit, phenotype, and genotype data
• Understanding factors influencing the estimated genetic variance and the distribution of breeding values
• A Note on the Conditioning of the H-1 Matrix Used in Single-Step GBLUP
• A Note on the Conditioning of the H−1 Matrix Used in Single-Step GBLUP
• The algorithm for proven and young (APY) from a different perspective
• Extension of the reduced animal model to single-step methods
• Single-step genomic evaluation for growth traits in a Mexican Braunvieh cattle population
• Short Communication: Reduced GBLUP equations to core animals in the algorithm for proven and young (APY)
• FnR: R package for computing inbreeding and numerator relationship coefficients
• Code & data – A note on the conditioning of the H^-1 matrix used in single-step GBLUP
• Code & data – Understanding factors influencing the estimated genetic variance and the distribution of breeding values
• 324. Large-scale multiple-trait single-step marker model implementation
• FnR: Inbreeding and Numerator Relationship Coefficients
• pedMermaid: Pedigree Mermaid Syntax
• Optimización de la predicción del valor de reproducción en ganado Braunvieh por medio del análisis multirasgo de rasgos de crecimiento
• Comparación de métodos de aprendizaje automático para predicción de valores de cría genómicos en características de crecimiento en bovinos Suizo Europeo