Lorenzo Barchi

Publications

• The Population Structure and Diversity of Eggplant from Asia and the Mediterranean Basin
• A RAD tag derived marker based eggplant linkage map and the location of QTLs determining anthocyanin pigmentation
• QTL analysis of plant development and fruit traits in pepper and performance of selective phenotyping
• Are the polygenic architectures of resistance to Phytophthora capsici and P. parasitica independent in pepper?
• Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variation
• Genomic assessment in Lactobacillus plantarum links the butyrogenic pathway with glutamine metabolism
• Linkage disequilibrium and genome-wide association analysis for anthocyanin pigmentation and fruit color in eggplant
• New insights on eggplant/tomato/pepper synteny and identification of eggplant and pepper orthologous QTL
• “Mind the Gap”: Hi-C Technology Boosts Contiguity of the Globe Artichoke Genome in Low-Recombination Regions
• QTL analysis reveals new eggplant loci involved in resistance to fungal wilts
• A chromosome-anchored eggplant genome sequence reveals key events in Solanaceae evolution
• A spiking strategy facilitates housekeeping selection for RT-qPCR analysis under different biotic stresses in eggplant
• Coding SNPs analysis highlights genetic relationships and evolution pattern in eggplant complexes
• Single Primer Enrichment Technology (SPET) for High-Throughput Genotyping in Tomato and Eggplant Germplasm
• Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource
• A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database
• Resequencing of Cynara cardunculus L. genotypes and detection of chromosome-scale single nucleotide polymorphisms (SNPs)/indels
• A New Intra-Specific and High-Resolution Genetic Map of Eggplant Based on a RIL Population, and Location of QTLs Related to Plant Anthocyanin Pigmentation and Seed Vigour
• Whole-genome assembly of Corylus avellana cv “Tonda Gentile delle Langhe” using linked-reads (10X Genomics)
• An Eggplant Recombinant Inbred Population Allows the Discovery of Metabolic QTLs Controlling Fruit Nutritional Quality
• A Genomic BSAseq Approach for the Characterization of QTLs Underlying Resistance to Fusarium oxysporum in Eggplant
• Mutations in the SmAPRR2 transcription factor suppressing chlorophyll pigmentation in the eggplant fruit peel are key drivers of a diversified colour palette
• Global range expansion history of pepper ( Capsicum spp.) revealed by over 10,000 genebank accessions
• Genome-Wide Survey and Development of the First Microsatellite Markers Database (AnCorDB) in Anemone coronaria L.
• The design of Capsicum spp. SSR assays via analysis of in silico DNA sequence, and their potential utility for genetic mapping
• QTL mapping in eggplant reveals clusters of yield-related loci and orthology with the tomato genome
• Segregation distortion and linkage analysis in eggplant (Solanum melongena L.)
• Genetic diversity assessment in cultivated cardoon by AFLP (amplified fragment length polymorphism) and microsatellite markers
• Association mapping for fruit, plant and leaf morphology traits in eggplant
• Identification of SNP and SSR markers in eggplant using RAD tag sequencing
• Population structure and genetic variation in autochthonous globe artichoke germplasm from Sicily Island
• Multivariate analysis of genetic relationships between Italian pepper landraces
• A high-resolution, intraspecific linkage map of pepper (Capsicum annuum L.) and selection of reduced recombinant inbred line subsets for fast mapping
• Mapping yield-associated QTL in globe artichoke
• RAD2seq: An efficient protocol for plant genotyping by Sequencing
• Mapping quantitative trait loci affecting biochemical and morphological fruit properties in eggplant (Solanum melongena L.)
• SNP mapping and identification of QTL for horticultural key breeding traits in eggplant (Solanum melongena L.)
• Improved genome assembly and pan‐genome provide key insights into eggplant domestication and breeding
• A Compendium for Novel Marker-Based Breeding Strategies in Eggplant
• Exploration of high‐throughput data for heat tolerance selection in Capsicum annuum
• The irregular fruit green netting: An eggplant domestication trait controlled by theSmGLK2gene with implications in fruit colour diversification
• Conventional and new genetic resources for an eggplant breeding revolution
• Multi‐environment association study highlights candidate genes for robust agronomic quantitative trait loci in a novel worldwide Capsicum core collection
• Analysis of >3400 worldwide eggplant accessions reveals two independent domestication events and multiple migration‐diversification routes
• Irregular green netting of eggplant fruit peel: a domestication trait controlled by SmGLK2 with potential for fruit colour diversification
• Association analyses reveal both anthropic and environmental selective events during eggplant domestication