Ksenia Kuznetsova

Publications

• Threonine versus isothreonine in synthetic peptides analyzed by high-resolution liquid chromatography/tandem mass spectrometry.
• [Modification of cysteine residues for mass spectrometry-based proteomic analysis: facts and artifacts].
• Adenosine-to-Inosine RNA Editing in Mouse and Human Brain Proteomes.
• Brain Proteome of Drosophila melanogaster Is Enriched with Nuclear Proteins.
• Proteogenomics of Adenosine-to-Inosine RNA Editing in the Fruit Fly.
• Proteogenomics of Malignant Melanoma Cell Lines: The Effect of Stringency of Exome Data Filtering on Variant Peptide Identification in Shotgun Proteomics.
• Identification of Single Amino Acid Substitutions in Proteogenomics.
• Proteogenomics of adenosine-to-inosine RNA editing in the fruit fly
• [ADAR-mediated messenger RNA editing: analysis at the proteome level].
• Human aqueous humor proteome in cataract, glaucoma, and pseudoexfoliation syndrome.
• Exome-based proteogenomics of HEK-293 human cell line: Coding genomic variants identified at the level of shotgun proteome.
• Methionine to isothreonine conversion as a source of false discovery identifications of genetically encoded variants in proteogenomics.
• [Conotoxins: from the biodiversity of gastropods to new drugs].
• Enchytraeidae (Annelida: Oligochaeta) from Eastern Dagestan, Russia, with the description of a new species
• Proteome-Wide Analysis of ADAR-mediated Messenger RNA Editing During Fruit Fly Ontogeny
• A history of study and new records of terrestrial enchytraeids (Annelida, Clitellata, Enchytraeidae) from the Russian Far East
• Proteome-Wide Analysis of ADAR-Mediated Messenger RNA Editing during Fruit Fly Ontogeny
• Proteogenomics of Adenosine-to-Inosine RNA Editing in the Fruit Fly
• Proteogenomics of adenosine-to-inosine RNA editing in the fruit fly
• Validating Amino Acid Variants in Proteogenomics Using Sequence Coverage by Multiple Reads
• Validating amino acid variants in proteogenomics using sequence coverage by multiple reads
• Interplay between A-to-I Editing and Splicing of RNA: A Potential Point of Application for Cancer Therapy
• Multiomic Profiling Identified EGF Receptor Signaling as a Potential Inhibitor of Type I Interferon Response in Models of Oncolytic Therapy by Vesicular Stomatitis Virus
• Vexitoxins: conotoxin-like venom peptides from predatory gastropods of the genus Vexillum
• Proteomic Analysis of Zebrafish Protein Recoding via mRNA Editing by ADAR Enzymes
• Cysteine alkylation methods in shotgun proteomics and their possible effects on methionine residues
• Identifying Protein Haplotypes by Mass Spectrometry
• A systematic mapping of the genomic and proteomic variation associated with monogenic diabetes
• Retention time and fragmentation predictors increase confidence in variant peptide identification
• Finding haplotypic signatures in proteins
• ProHap enables proteomic database generation accounting for population diversity
• Bioinformatics pipeline for the systematic mining genomic and proteomic variation linked to rare diseases: The example of monogenic diabetes
• ProHap enables human proteomic database generation accounting for population diversity