JR
Publications
- Temperature Response of Planktonic Microbiota in Remote Alpine Lakes
- Long-term and high-concentration heavy-metal contamination strongly influences the microbiome and functional genes in Yellow River sediments
- Diet changes due to urbanization in South Africa are linked to microbiome and metabolome signatures of Westernization and colorectal cancer
- Large-scale Direct Targeting for Drug Repositioning and Discovery
- Bacteriophages Isolated from Stunted Children Can Regulate Gut Bacterial Communities in an Age-Specific Manner
- ViroProfiler: a containerized bioinformatics pipeline for viral metagenomic data analysis
- Bacteria and bacteriophage consortia are associated with protective intestinal metabolites in patients receiving stem cell transplantation
- TCMSP: A database of systems pharmacology for drug discovery from herbal medicines
- Transient Mild Photothermia Improves Therapeutic Performance of Oral Nanomedicines with Enhanced Accumulation in the Colitis Mucosa
- DeepsmirUD: Prediction of Regulatory Effects on microRNA Expression Mediated by Small Molecules Using Deep Learning
- Small molecule-mediated targeting of microRNAs for drug discovery: Experiments, computational techniques, and disease implications
- Targeted Therapy for EWS-FLI1 in Ewing Sarcoma
- TMKit: a Python interface for computational analysis of transmembrane proteins
- DeepdlncUD: Predicting regulation types of small molecule inhibitors on modulating lncRNA expression by deep learning
- Helicobacter pylori infection alters gut virome by expanding temperate phages linked to increased risk of colorectal cancer
- Bacteria and bacteriophage consortia modulate cecal SCFA production and host metabolism to enhance feed efficiency in ducks
- PyPropel: a Python-based tool for efficiently processing and characterising protein data
- SVLearn: a dual-reference machine learning approach enables accurate cross-species genotyping of structural variants
- Challenges of Studying the Human Virome – Relevant Emerging Technologies
- Unveiling the hidden role of aquatic viruses in hydrocarbon pollution bioremediation
- Gut virome profiling identifies an association between temperate phages and colorectal cancer promoted by Helicobacter pylori infection
- Large-scale exploration and analysis of drug combinations
- Differences in gut virome related to barrett esophagus and esophageal adenocarcinoma
- Toxic/Bioactive Peptide Synthesis Genes Rearranged by Insertion Sequence Elements Among the Bloom-Forming Cyanobacteria Planktothrix
- Insights from systems pharmacology into cardiovascular drug discovery and therapy