Jeroen Steenbeek

Publications

• A Stepwise Fitting Procedure for automated fitting of Ecopath with Ecosim models
• Standardized ecological indicators to assess aquatic food webs: The ECOIND software plug-in for Ecopath with Ecosim models
• Mapping diversity of species in global aquaculture
• Refinement of an Ecopath with Ecosim (EwE) model of the Clyde Sea for use within the Clyde Marine Region digital Maritime Spatial Planning (MSP) Challenge Game
• Current status, advancements and development needs of geospatial decision support tools for marine spatial planning in European seas
• EwE​ ​model​ ​guidelines​ ​for​ ​MSP​ ​game play
• Management Strategy Evaluation toolkit for Ecopath with Ecosim (model output and technical report)
• Discard ban: A simulation-based approach combining hierarchical Bayesian and food web spatial models
• Insights on integrating habitat preferences in process-oriented ecological models – a case study of the southern North Sea
• Current and potential contributions of the Gulf of Lion Fisheries Restricted Area to fisheries sustainability in the NW Mediterranean Sea
• Using ecosystem modeling to evaluate trade-offs in coastal management: Effects of large-scale river diversions on fish and fisheries
• A risk-based approach to cumulative effect assessments for marine management
• Historical changes of the Mediterranean Sea ecosystem: Modelling the role and impact of primary productivity and fisheries changes over time
• Modelling marine trophic transfer of radiocarbon (14C) from a nuclear facility
• Hindcasting the dynamics of an EasternMediterranean marine ecosystem under the impacts of multiple stressors
• Using ecosystem modeling to determine hypoxia effects on fish and fisheries
• EcotracerManual_5.pdf
• Diet calculator guide.pdf
• EwE​ ​model​ ​guidelines​ ​for​ ​MSP​ ​game play
• ISIMIP2a Simulation Data from Fisheries & Marine Ecosystems (Fish-MIP; global) Sector
• Ecosampler: A new approach to assessing parameter uncertainty in Ecopath with Ecosim
• SOS small pelagics: A safe operating space for small pelagic fish in the western Mediterranean Sea
• ISIMIP2a Simulation Data from Fisheries & Marine Ecosystems (Fish-MIP; regional) Sector
• Future scenarios of marine resources and ecosystem conditions in the Eastern Mediterranean under the impacts of fishing, alien species and sea warming
• Reducing eutrophication increases spatial extent of communities supporting commercial fisheries: A model case study
• A protocol for the intercomparison of marine fishery and ecosystem models: Fish-MIP v1.0
• Following the Fish: The Role of Subsistence in a Fish-based Value Chain
• Erratum: Reducing eutrophication increases spatial extent of communities supporting commercial fisheries: A model case study (ICES Journal of Marine Science (2018) DOI: 10.1093/icesjms/fsy003)
• Integrating Ecopath with Ecosim into the MSP software - conceptual design
• Integrating Ecopath with Ecosim into the MSP software - conceptual design
• State-of-the-art global models underestimate impacts from climate extremes
• MSP Challenge 2050 food web review
• MSP Challenge 2050 food web review
• EwE tools for MSP user guide.pdf
• Biomass emitter guide.pdf
• Best practice in Ecopath with Ecosim food-web models for ecosystem-based management
• New, flexible and open-source fisheries self-reporting app: The Shiny4SelfReport
• An Ecopath with Ecosim model for the Pacific coast of eastern Japan: Describing the marine environment and its fisheries prior to the Great East Japan earthquake
• A Digital Game-Based Simulation Platform for Integrated Marine Spatial Planning: Design Challenges and Technical Innovations
• Combining ecosystem modeling with serious gaming in support of transboundary maritime spatial planning
• MSP Challenge 2050 food web review
• The effects of marine protected areas on ecosystem recovery and fisheries using a comparative modelling approach
• Human Activities Help Alien Species to Invade the Mediterranean Sea
• Using Gaming Technology to Explore and Visualize Management Impacts on Marine Ecosystems
• Effects of Nutrient Management Scenarios on Marine Food Webs: A Pan-European Assessment in Support of the Marine Strategy Framework Directive
• Disentangling diverse responses to climate change among global marine ecosystem models
• A novel approach to explicitly model the spatiotemporal impacts of structural complexity created by alien ecosystem engineers in a marine benthic environment
• Next-generation ensemble projections reveal higher climate risks for marine ecosystems
• Making spatial-temporal marine ecosystem modelling better – A perspective
• Modelling dynamic ecosystems: venturing beyond boundaries with the Ecopath approach
• Modelling the cumulative spatial-temporal effects of environmental drivers and fishing in a NW Mediterranean marine ecosystem
• Exploring effects of hypoxia on fish and fisheries in the northern Gulf of Mexico using a dynamic spatially explicit ecosystem model
• Flash: The Future: Pocket PC / DVD / ITV / Video / Game Consoles / Wireless
• Ensemble projections of global ocean animal biomass with climate change
• The biodiversity of the Mediterranean Sea: estimates, patterns, and threats.
• Employing ecosystem models and geographic information systems (GIS) to investigate the response of changing marsh edge on historical biomass of estuarine nekton in Barataria Bay, Louisiana, USA
• The global ocean is an ecosystem: simulating marine life and fisheries
• Invading the Mediterranean Sea: biodiversity patterns shaped by human activities
• A century of fish biomass decline in the ocean
• Modelling the Mediterranean marine ecosystem as a whole: addressing the challenge of complexity
• Advancing marine conservation planning in the Mediterranean Sea
• The Mediterranean Sea under siege: spatial overlap between marine biodiversity, cumulative threats and marine reserves
• Database-driven models of the world's Large Marine Ecosystems
• ‘Low-hanging fruit’ for conservation of marine vertebrate species at risk in the Mediterranean Sea
• Ecopath with Ecosim as a model-building toolbox: Source code capabilities, extensions, and variations
• Evaluation of the effects on rockfish and kelp artisanal fisheries of the proposed Mejillones Peninsula marine protected area (northern Chile, SE Pacific coast)
• Bridging the gap between ecosystem modeling tools and geographic information systems: Driving a food web model with external spatial–temporal data
• A combined ecosystem and value chain modeling approach for evaluating societal cost and benefit of fishing
• Spatial optimization of protected area placement incorporating ecological, social and economical criteria
• Valuing seafood: The Peruvian fisheries sector
• Representing Variable Habitat Quality in a Spatial Food Web Model
• Biodiversity data requirements for systematic conservation planning in the Mediterranean Sea
• Making spatial-temporal marine ecosystem modelling better – a perspective
• Small pelagic fish fitness relates to local environmental conditions and trophic variables
• Modelling marine trophic transfer of radiocarbon (14C) from a nuclear facility
• ISIMIP2a Simulation Data from Fisheries & Marine Ecosystems (Fish-MIP; regional) Sector
• ISIMIP2a Simulation Data from Fisheries & Marine Ecosystems (Fish-MIP; global) Sector
• Utility and challenges of marine ecosystem models for a better understanding and management of the ocean
• Looking with remote eyes: novel technologies for a better management of the ocean
• Applying the Safe Operating Space (SOS) approach to sustainable commercial fishing under varying lake levels and littoral zone conditions
• Climate and fishing simultaneously impact small pelagic fish in the oceans around the southernmost tip of Africa
• Fisheries-enhanced pressure on Mediterranean regions and pelagic species already impacted by climate change
• Overfishing species on the move may burden seafood provision in the low-latitude Atlantic Ocean
• Modelling the Mediterranean Sea ecosystem at high spatial resolution to inform the ecosystem-based management in the region
• Data and code to next-generation ensemble projections reveal higher climate risks for marine ecosystems
• Data and code to next-generation ensemble projections reveal higher climate risks for marine ecosystems
• ISIMIP2a Simulation Data from the Regional Fisheries & Marine Ecosystems Sector
• Advances in spatial‐temporal coastal and marine ecosystem modeling using Ecospace.
• Advancing Global Ecological Modeling Capabilities to Simulate Future Trajectories of Change in Marine Ecosystems
• Evaluating red tide effects on the West Florida Shelf using a spatiotemporal ecosystem modeling framework
• Current and Future Influence of Environmental Factors on Small Pelagic Fish Distributions in the Northwestern Mediterranean Sea
• Identifying and prioritizing demersal fisheries restricted areas based on combined ecological and fisheries criteria: the western Mediterranean
• Mesoscale productivity fronts and local fishing opportunities in the European Seas
• The Ocean Decade: A True Ecosystem Modeling Challenge
• Global ensemble projections reveal trophic amplification of ocean biomass declines with climate change
• Costs and economic impacts of expanding marine protected area systems to 30% coverage
• Changes in Life History Traits of Small Pelagic Fish in the Western Mediterranean Sea
• Systematic evaluation of a spatially explicit ecosystem model to inform area-based management in the deep-sea
• Evaluation of fisheries management policies in the alien species-rich Eastern Mediterranean under climate change
• Trophic amplification: A model intercomparison of climate driven changes in marine food webs
• Safenet "Biomass emitter" user's guide version 0.5, 29 September 2023. Compatible with EwE 6.7.0.18532 and onward
• Safenet "Biomass emitter" user's guide
• Making ecosystem modelling operational - a novel distributed execution framework to systematically explore ecological responses to divergent climate trajectories
• ISIMIP2a Simulation Data from the Regional Fisheries & Marine Ecosystems Sector
• Modelling marine trophic transfer of radiocarbon (14C) from a nuclear facility
• ISIMIP2a Simulation Data from Fisheries & Marine Ecosystems (Fish-MIP; regional) Sector
• ISIMIP2a Simulation Data from Fisheries & Marine Ecosystems (Fish-MIP; global) Sector
• Retrospective analysis of the pelagic ecosystem of the Western Mediterranean Sea: Drivers, changes and effects
• Ecopath with Ecosim MPA Dynamics plug-in - a brief users' guide
• Making Ecosystem Modeling Operational–A Novel Distributed Execution Framework to Systematically Explore Ecological Responses to Divergent Climate Trajectories
• Global marine ecosystem response to a strong AMOC weakening under low and high future emission scenarios
• A digital game-based simulation platform for integrated maritime spatial planning: Design challenges and technical innovations
• Food-Web Modeling in the Maritime Spatial Planning Challenge Simulation Platform: Results from the Baltic Sea Region
• Exploring multiple stressor effects with Ecopath, Ecosim, and Ecospace: Research designs, modeling techniques, and future directions
• Multi-zone marine protected areas: Assessment of ecosystem and fisheries benefits using multiple ecosystem models
• Systematic Evaluation of a Spatially Explicit Ecosystem Model to Inform Area-Based Management in the Deep-Sea
• Using ecosystem models to inform ecosystem-based fisheries management in Europe: a review of the policy landscape and related stakeholder needs
• Identifying and prioritizing demersal fisheries restricted areas based on combined ecological and fisheries criteria: The western Mediterranean
• Predicting marine species distributions: Complementarity of food-web and Bayesian hierarchical modelling approaches