Iker Irisarri

Publications

• Phylogeny reconstruction
• PREQUAL: Detecting non-homologous characters in sets of unaligned homologous sequences
• Diversity and evolution of membrane intrinsic proteins
• A multigene species tree for Western Mediterranean painted frogs (Discoglossus)
• The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates
• Reversal to air-driven sound production revealed by a molecular phylogeny of tongueless frogs, family Pipidae
• The complete mitochondrial genome of the relict frog Leiopelma archeyi: Insights into the root of the frog Tree of Life
• Molecular phylogeny of Acanthochitonina (Mollusca: Polyplacophora: Chitonida): three new mitochondrial genomes, rearranged gene orders and systematics
• The complete mitochondrial genome of Scutopus ventrolineatus (Mollusca: Chaetodermomorpha) supports the Aculifera hypothesis
• Confirming Domergue: Ithycyphus oursi Domergue, 1986 predation upon Furcifer oustaleti (Mocquard, 1894)
• Genomics of Adaptation to Multiple Concurrent Stresses: Insights from Comparative Transcriptomics of a Cichlid Fish from One of Earth’s Most Extreme Environments, the Hypersaline Soda Lake Magadi in Kenya, East Africa
• The complete mitochondrial genomes of the Galápagos iguanas, Amblyrhynchus cristatus and Conolophus subcristatus
• Molecular evolution of the neural crest regulatory network in ray-finned fish
• The identification of the closest living relative(s) of tetrapods: Phylogenomic lessons for resolving short ancient internodes
• Inferring the shallow phylogeny of true salamanders (Salamandra) by multiple phylogenomic approaches
• Phylotranscriptomic consolidation of the jawed vertebrate timetree.
• Animal tracking meets migration genomics: transcriptomic analysis of a partially migratory bird species.
• Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes
• New patellogastropod mitogenomes help counteracting long-branch attraction in the deep phylogeny of gastropod mollusks
• Aquaporin discovery in the genomic era
• Environmental temperatures shape thermal physiology as well as diversification and genome-wide substitution rates in lizards
• A mitogenomic phylogeny of chitons (Mollusca: Polyplacophora)
• Phylogenomic Insights into the Origin of Primary Plastids
• A molecular timescale for the origin of red algal-derived plastids
• Phylogenetic hypothesis testing
• Historical isolation facilitates species radiation by sexual selection: Insights from Chorthippus grasshoppers
• The genome of the venomous snail Lautoconus ventricosus sheds light on the origin of conotoxin diversity
• The evolution of the phenylpropanoid pathway entailed pronounced radiations and divergences of enzyme families
• Phylogenomic Insights into the Origin of Primary Plastids
• Giant lungfish genome elucidates the conquest of land by vertebrates
• A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids
• Sarcopterygian fin ontogeny elucidates the origin of hands with digits
• The evolution of the phenylpropanoid pathway entailed pronounced radiations and divergences of enzyme families
• Initial Phylotranscriptomic Confirmation of Homoplastic Evolution of the Conspicuous Coloration and Bufoniform Morphology of Pumpkin-Toadlets in the Genus Brachycephalus
• Unexpected cryptic species among streptophyte algae most distant to land plants
• Plant genome sequence assembly in the era of long reads: Progress, challenges and future directions
• Punctuated ancestral gene gains in streptophyte evolution
• Different patterns of gene evolution underpin water‐related innovations in land plants
• A phylogenomically informed five-order system for the closest relatives of land plants
• A Phylogenomic Backbone for Gastropod Molluscs
• A seed‐like proteome in oil‐rich tubers
• Squalomix: shark and ray genome analysis consortium and its data sharing platform [version 1; peer review: 2 approved]
• Environmental gradients reveal stress hubs predating plant terrestrialization
• Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution
• Accessible versatility underpins the deep evolution of plant specialized metabolism
• Multiple Instances of Adaptive Evolution in Aquaporins of Amphibious Fishes
• Efficient hybrid strategies for assembling the plastome, mitochondriome, and large nuclear genome of diploidRanunculus cassubicifolius(Ranunculaceae)
• Divergent responses in desiccation experiments in two ecophysiologically different Zygnematophyceae
• Phylogenomic insights into the first multicellular streptophyte
• Single-cell genomics reveals new rozellid lineages and supports their sister relationship to Microsporidia
• Sequence similarity networks bear out hierarchical relationships of green cytochrome P450
• Recurrent evolution of seaweed body plan complexity among photosynthetic eukaryotes
• Phylogeny and evolution of streptophyte algae
• Early diversification of membrane intrinsic proteins (MIPs) in eukaryotes
• Evolutionary assembly of the plant terrestrialization toolkit from protein domains
• Early Diversification of Membrane Intrinsic Proteins (MIPs) in Eukaryotes
• The genomes of all lungfish inform on genome expansion and tetrapod evolution
• Evolving circuitries in plant signaling cascades
• Abiotic factors that prompt major ecological transitions: Are fish on land to escape an intolerable aquatic environment?