II
Publications
- Phylogeny reconstruction
- PREQUAL: Detecting non-homologous characters in sets of unaligned homologous sequences
- Diversity and evolution of membrane intrinsic proteins
- A multigene species tree for Western Mediterranean painted frogs (Discoglossus)
- The origin of modern frogs (Neobatrachia) was accompanied by acceleration in mitochondrial and nuclear substitution rates
- Reversal to air-driven sound production revealed by a molecular phylogeny of tongueless frogs, family Pipidae
- The complete mitochondrial genome of the relict frog Leiopelma archeyi: Insights into the root of the frog Tree of Life
- Molecular phylogeny of Acanthochitonina (Mollusca: Polyplacophora: Chitonida): three new mitochondrial genomes, rearranged gene orders and systematics
- The complete mitochondrial genome of Scutopus ventrolineatus (Mollusca: Chaetodermomorpha) supports the Aculifera hypothesis
- Confirming Domergue: Ithycyphus oursi Domergue, 1986 predation upon Furcifer oustaleti (Mocquard, 1894)
- Genomics of Adaptation to Multiple Concurrent Stresses: Insights from Comparative Transcriptomics of a Cichlid Fish from One of Earth’s Most Extreme Environments, the Hypersaline Soda Lake Magadi in Kenya, East Africa
- The complete mitochondrial genomes of the Galápagos iguanas, Amblyrhynchus cristatus and Conolophus subcristatus
- Molecular evolution of the neural crest regulatory network in ray-finned fish
- The identification of the closest living relative(s) of tetrapods: Phylogenomic lessons for resolving short ancient internodes
- Inferring the shallow phylogeny of true salamanders (Salamandra) by multiple phylogenomic approaches
- Phylotranscriptomic consolidation of the jawed vertebrate timetree.
- Animal tracking meets migration genomics: transcriptomic analysis of a partially migratory bird species.
- Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes
- New patellogastropod mitogenomes help counteracting long-branch attraction in the deep phylogeny of gastropod mollusks
- Aquaporin discovery in the genomic era
- Environmental temperatures shape thermal physiology as well as diversification and genome-wide substitution rates in lizards
- A mitogenomic phylogeny of chitons (Mollusca: Polyplacophora)
- Phylogenomic Insights into the Origin of Primary Plastids
- A molecular timescale for the origin of red algal-derived plastids
- Phylogenetic hypothesis testing
- Historical isolation facilitates species radiation by sexual selection: Insights from Chorthippus grasshoppers
- The genome of the venomous snail Lautoconus ventricosus sheds light on the origin of conotoxin diversity
- The evolution of the phenylpropanoid pathway entailed pronounced radiations and divergences of enzyme families
- Phylogenomic Insights into the Origin of Primary Plastids
- Giant lungfish genome elucidates the conquest of land by vertebrates
- A molecular timescale for eukaryote evolution with implications for the origin of red algal-derived plastids
- Sarcopterygian fin ontogeny elucidates the origin of hands with digits
- The evolution of the phenylpropanoid pathway entailed pronounced radiations and divergences of enzyme families
- Initial Phylotranscriptomic Confirmation of Homoplastic Evolution of the Conspicuous Coloration and Bufoniform Morphology of Pumpkin-Toadlets in the Genus Brachycephalus
- Unexpected cryptic species among streptophyte algae most distant to land plants
- Plant genome sequence assembly in the era of long reads: Progress, challenges and future directions
- Punctuated ancestral gene gains in streptophyte evolution
- Different patterns of gene evolution underpin water‐related innovations in land plants
- A phylogenomically informed five-order system for the closest relatives of land plants
- A Phylogenomic Backbone for Gastropod Molluscs
- A seed‐like proteome in oil‐rich tubers
- Squalomix: shark and ray genome analysis consortium and its data sharing platform [version 1; peer review: 2 approved]
- Environmental gradients reveal stress hubs predating plant terrestrialization
- Chromosome-level genomes of multicellular algal sisters to land plants illuminate signaling network evolution