Denis Petrovskiy

Publications

• Managing of Unassigned Mass Spectrometric Data by Neural Network for Cancer Phenotypes Classification
• Convolutional neural network in proteomics and metabolomics for determination of comorbidity between cancer and schizophrenia
• PSSNet—An Accurate Super-Secondary Structure for Protein Segmentation
• Tracking Health, Performance and Recovery in Athletes Using Machine Learning
• Modeling Side Chains in the Three-Dimensional Structure of Proteins for Post-Translational Modifications
• Atomic Simulation of the Binding of JAK1 and JAK2 with the Selective Inhibitor Ruxolitinib
• In Silico Study of the Interactions of Anle138b Isomer, an Inhibitor of Amyloid Aggregation, with Partner Proteins
• PSSNet-An Accurate Super-Secondary Structure for Protein Segmentation
• 3 beta-Corner Stability by Comparative Molecular Dynamics Simulations
• Dataset of 3 beta-Corner and 3 beta-Corner-like Structures
• Biological Role of the 3 beta-Corner Structural Motif in Proteins
• SAFoldNet: A Novel Tool for Discovering and Aligning Three-Dimensional Protein Structures Based on a Neural Network
• Analysis of Structural Changes in the Protein near the Phosphorylation Site
• Bioinformatics Methods for Constructing Metabolic Networks
• PowerNovo: de novo peptide sequencing via tandem mass spectrometry using an ensemble of transformer and BERT models
• Candidate Molecular Biomarkers of Traumatic Brain Injury: A Systematic Review
• Biobank Digitalization: From Data Acquisition to Efficient Use
• Sample Preparation for Metabolomic Analysis in Exercise Physiology
• Plasma proteome fingerprint in kidney diseases
• Extended range proteomic analysis of blood plasma from schizophrenia patients
• PSSKB: A Web Application to Study Protein Structures