David Martínez Enguita

Publications

• Identification of core multi-omic disease modules in asthma
• A validated single-cell-based strategy to identify diagnostic and therapeutic targets in complex diseases
• Genomically concordant multiple sclerosis multi-omic modules enriched for risk factors
• Digital twins to personalize medicine
• MODifieR: an ensemble R package for inference of disease modules from transcriptomics networks
• Combined prenatal Lactobacillus reuteri and ω-3 supplementation synergistically modulates DNA methylation in neonatal T helper cells
• Identification and Characterization of Human Activation-Induced ChAT+CD4+ T Cells
• A validated generally applicable approach using the systematic assessment of disease modules by GWAS reveals a multi-omic module strongly associated with risk factors in multiple sclerosis
• Data-driven representations using deep network-coherent methylation autoencoders to identify robust disease and risk factor signatures
• Exploring the Biological Interaction Network Structure within the Compressed Space of Deep Methylation Autoencoders
• New Data-Driven Gene Representations Using Deep Autoencoders at Multiple Omics to Identify Candidate Disease Genes and Robust Classifiers
• Data-Driven Gene Representations Using Deep Autoencoders at Multiple Omics to Identify Candidate Disease Genes and Robust Classifiers
• Cholinergic regulation of vascular endothelial function by human ChAT + T cells
• NCAE: data-driven representations using a deep network-coherent DNA methylation autoencoder identify robust disease and risk factor signatures
• A DNA Methylation Signature from Buccal Swabs to Identify Tuberculosis Infection
• A DNA Methylation Signature From Buccal Swabs to Identify Tuberculosis Infection
• Precise and interpretable neural networks reveal epigenetic signatures of aging in youth across health and disease
• A DNA methylation signature identified in the buccal mucosa reflecting active tuberculosis is changing during tuberculosis treatment
• Precise and interpretable neural networks reveal epigenetic signatures of aging across youth in health and disease
• Longitudinal epigenetic rewiring in lung immune cells in patients with post-COVID-19 condition
• Identifying DNA Methylation Patterns in Post COVID-19 Condition: Insights from a One-Year Prospective Cohort Study