Chang Liu

Publications

• GLABROUS INFLORESCENCE STEMS modulates the regulation by gibberellins of epidermal differentiation and shoot maturation in Arabidopsis
• Nuclear factor Y-mediated H3K27me3 demethylation of the SOC1 locus orchestrates flowering responses of Arabidopsis
• Chromatin in 3D: progress and prospects for plants
• Arabidopsis RNA processing factor SERRATE regulates the transcription of intronless genes
• A repressor complex governs the integration of flowering signals in Arabidopsis
• Coming into bloom: the specification of floral meristems
• Pin1At encoding a peptidyl-prolyl cis/trans isomerase regulates flowering time in Arabidopsis
• MOTHER OF FT AND TFL1 regulates seed germination through a negative feedback loop modulating ABA signaling in Arabidopsis
• FTIP1 is an essential regulator required for florigen transport
• In situ Hi-C library preparation for plants to study their three-dimensional chromatin interactions on a genome-wide scale
• Regulation of floral patterning by flowering time genes
• Genome‐wide identification of SOC1 and SVP targets during the floral transition in Arabidopsis
• Direct interaction of AGL24 and SOC1 integrates flowering signals in Arabidopsis
• A conserved genetic pathway determines inflorescence architecture in Arabidopsis and rice
• Genome-wide analysis of chromatin packing in Arabidopsis thaliana at single-gene resolution
• Genome-wide analysis of local chromatin packing in Arabidopsis thaliana
• Integration of cytokinin and gibberellin signalling by Arabidopsis transcription factors GIS, ZFP8 and GIS2 in the regulation of epidermal cell fate
• Nonrandom domain organization of the Arabidopsis genome at the nuclear periphery
• Genome-Wide Identification of Chromatin Domains Anchored at the Nuclear Periphery in Plants
• Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors
• Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin
• Three-dimensional chromatin packing and positioning of plant genomes
• Chromatin accessibility landscapes activated by cell surface and intracellular immune receptors
• Arabidopsis ARGONAUTE 1 Binds Chromatin to Promote Gene Transcription in Response to Hormones and Stresses
• Chromosome-level and haplotype-resolved genome assembly enabled by high-throughput single-cell sequencing of gamete genomes
• Marchantia TCP transcription factor activity correlates with three-dimensional chromatin structure
• Isolation of Lineage Specific Nuclei Based on Distinct Endoreduplication Levels and Tissue-Specific Markers to Study Chromatin Accessibility Landscapes
• Chromatin organization in early land plants reveals an ancestral association between H3K27me3, transposons, and constitutive heterochromatin
• Study of Cell-Type-Specific Chromatin Organization: In Situ Hi-C Library Preparation for Low-Input Plant Materials
• Chromatin domains in space and their functional implications
• Pseudo-chromosome–length genome assembly of a double haploid “Bartlett” pear (Pyrus communis L.)
• Small peptides modulate the immune function of the ion channel-like protein ACD6 in Arabidopsis thaliana
• R-Loop Mediated trans Action of the APOLO Long Noncoding RNA
• Not just gene expression: 3D implications of chromatin modifications during sexual plant reproduction
• Plant lamin-like proteins mediate chromatin tethering at the nuclear periphery
• Polymorphic Inverted Repeats near coding genes impact chromatin topology and phenotypic traits in Arabidopsis thaliana
• Gradual evolution of allopolyploidy in Arabidopsis suecica
• CHROMOMETHYLTRANSFERASE3/ KRYPTONITE maintain the sulfurea paramutation in Solanum lycopersicum
• Pseudo-chromosome length genome assembly of a double haploid ‘Bartlett’ pear (Pyrus communis L.)
• Gradual evolution of allopolyploidy in Arabidopsis suecica
• Characterization of a Plant Nuclear Matrix Constituent Protein in Liverwort
• Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system
• Implications of liquid–liquid phase separation in plant chromatin organization and transcriptional control
• DYT6 mutated THAP1 is a cell type dependent regulator of the SP1 family
• Altered H3K27 trimethylation contributes to flowering time variations in polyploid Arabidopsis thaliana ecotypes
• CHROMOMETHYLTRANSFERASE3/KRYPTONITE maintains the sulfurea paramutation in Solanum lycopersicum
• Polycomb-mediated repression of paternal chromosomes maintains haploid dosage in diploid embryos of Marchantia
• Prominent topologically associated domains differentiate global chromatin packing in rice from Arabidopsis
• Altered chromatin compaction and histone methylation drive non-additive gene expression in an interspecific Arabidopsis hybrid
• A spatiotemporally regulated transcriptional complex underlies heteroblastic development of leaf hairs in Arabidopsis thaliana
• Specification of Arabidopsis floral meristem identity by repression of flowering time genes
• easyGWAS: a cloud-based platform for comparing the results of genome-wide association studies
• The Rosa genome provides new insights into the domestication of modern roses
• Intronic enhancers of the human SNCA gene predominantly regulate its expression in brain in vivo
• Industrial chicory genome gives insight into the molecular time table of anther development and male sterility
• Transcriptional reactivation of the tRNASer/tRNATyrgene cluster inArabidopsis thalianaroot tip
• 3D chromatin maps of a brown alga reveal U/V sex chromosome spatial organisation
• PDS5s control the Arabidopsis 3D genome by suppressing the formation of TAD-like domains
• Gradual evolution of allopolyploidy inArabidopsis suecica
• Sub-functionalization and epigenetic regulation of a biosynthetic gene cluster inSolanaceae
• Mutations of PDS5 genes enhance TAD-like domain formation Arabidopsis thaliana
• 3D chromatin maps of a brown alga reveal U/V sex chromosome spatial organization
• Subfunctionalization and epigenetic regulation of a biosynthetic gene cluster in Solanaceae