Binsheng Gong


  • Ultra-deep sequencing data from a liquid biopsy proficiency study demonstrating analytic validity
  • Ultra-deep multi-oncopanel sequencing of benchmarking samples with a wide range of variant allele frequencies
  • Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology
  • A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency
  • Assessment of Clonal Expansion Using CarcSeq Measurement of Lung Cancer Driver Mutations and Correlation With Mouse Strain- and Sex-Related Incidence of Spontaneous Lung Neoplasia
  • Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions
  • Identification of Translational microRNA Biomarker Candidates for Ketoconazole-Induced Liver Injury Using Next-Generation Sequencing
  • Impact of Sequencing Depth and Library Preparation on Toxicological Interpretation of RNA-Seq Data in a “Three-Sample” Scenario
  • A robust approach based on Weibull distribution for clustering gene expression data
  • A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
  • The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
  • Characterization of microRNA Expression Patterns and their Target Genes to Discover Potential Biomarkers for Hepatacaciongenesis after Exposed to Thioacetamide in Rats
  • An investigation of biomarkers derived from legacy microarray data for their utility in the RNA-seq era
  • Bioinformatics Applications Reveal Gene Regulation Complexities in Response to Toxicant Exposures
  • Discovering Functional Modules by Topic Modeling RNA-Seq Based Toxicogenomic Data
  • Global gene expression distribution in non-cancerous complex diseases
  • Genetic control of primary microRNA insight into cis- and trans-regulatory variations by RNA-seq
  • Combined gene expression and protein interaction analysis of dynamic modularity in glioma prognosis
  • Disease-driven detection of differential inherited SNP modules from SNP network
  • DOSim: An R package for similarity between diseases based on Disease Ontology
  • Functional Homogeneity in microRNA Target Heterogeneity-a New Sight into Human microRNomics
  • Disease embryo development network reveals the relationship between disease genes and embryo development genes
  • From phenotype to gene: Detecting disease-specific gene functional modules via a text-based human disease phenotype network construction
  • Novel strategies to mine alcoholism-related haplotypes and genes by combining existing knowledge framework
  • MicroRNA regulation constrains the organization of target genes on mammalian chromosomes
  • SubpathwayMiner: a software package for flexible identification of pathways
  • Application of a genetic algorithm - Support vector machine hybrid for prediction of clinical phenotypes based on genome-wide SNP profiles of Sib pairs
  • Gene mining: a novel and powerful ensemble decision approach to hunting for disease genes using microarray expression profiling
  • A systematic method for mapping multiple loci: An application to construct a genetic network for rheumatoid arthritis
  • Correlation between genetic polymorphism of cytokine genes, plasma protein levels and bronchial asthma in the Han people in northern China
  • Role of coxsackievirus and adenovirus receptor in the pathogenesis of dilated cardiomyopathy and its influencing factor
  • Data mining of RNA expression and DNA genotype data: Presentation group 5 contributions to Genetic Analysis Workshop 15
  • Familial aggregation analysis of gene expressions.
  • Single-nucleotide polymorphism-gene intermixed networking reveals co-linkers connected to multiple gene expression phenotypes.
  • Novel strategies to identify relevant molecular signatures for complex human diseases based on data of identical-by-decent profiles and genomic context.
  • Analysis of sib-pair IBD profiles and genomic context for identification of the relevant molecular signatures for alcoholism
  • Multivariate sib-pair linkage analysis of longitudinal phenotypes by three step-wise analysis approaches
  • Landscape of circRNAs Across 11 Organs and 4 Ages in Fischer 344 Rats

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