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Poster NBIC 2014 MELIUS.pdf (346.56 kB)

Pathway Profiling of Human Tissues - Connecting PathVisio to Expression Atlas

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posted on 2014-04-07, 11:35 authored by Jonathan MeliusJonathan Melius, Martina KutmonMartina Kutmon, Lars Eijssen

The core idea is to build a PathVisio plugin that connects to Expression Atlas in order to directly load data sets and visualize the data on pathways in PathVisio. Next focus is a plugin on human tissue data available from Expression Atlas in order to determine which pathways are active in which tissues or have different levels of activity between certain tissues. As a final step in the project, the 'tissue' plugin is used to determine the ‘tissue-profile’ for each pathway on WikiPathways.

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