posted on 2005-12-01, 00:00authored byPeter Sandusky, Daniel Raftery
The authors recently proposed an approach to the metabonomic analysis of biofluid mixtures based on the
use of the selective TOCSY experiment (Sandusky, P.;
Raftery, D. Anal. Chem.2005, 77, 2455). This method
has some significant advantages over standard metabonomic analysis. However, when analyzing overlapped
components, the selective TOCSY method can suffer from
the relatively high likelihood of simultaneous excitation
of several spin systems at once. This multiple excitation
can cause problems both with the purity of the individual
TOCSY peaks observed and with their assignment into
specific spin systems. To address this problem, the
possibility of using a more selective excitation is initially
explored. Unfortunately, in most cases, greater spin
system selectivity can only be gained at the expense of
sensitivity. This is obviously an unacceptable tradeoff
when dealing with biofluid samples. However, the application of the Pearson product moment correlation to
the TOCSY peak integral intensities provides a test for
individual TOCSY peak purity and allows for the assignment of the peaks into spin systems. The specific application of this two-stage “semiselective” TOCSY method to
rat and human urine is presented. Significantly, it is also
demonstrated that the use of semiselective TOCSY spectra
as data inputs for PCA calculations provides a more
sensitive and reliable method of distinguishing small
differences in biofluid composition than the standard
metabonomic approach using complete 1D proton NMR
spectra of urine samples.