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GTEx: Clustermaps of motif-condition-weight matrix.

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posted on 2020-05-01, 17:24 authored by Simone Lederer, Tom Heskes, Simon J. van Heeringen, Cornelis A. Albers

Weights for the motif-condition-weights of those 56 common motifs, that are outside of 2.5 times the inter-quantile range for all motifs over a tissue. The weights are computed assuming dependence (A) or independence (B) between the conditions.

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Investigating the effect of dependence between conditions with Bayesian Linear Mixed Models for motif activity analysis
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Ridge Regressionsignalgene expression levelcovariance structuremodel motif influenceassumptionmotif activity analysis Motivation Cellular identityTF motifsDNABayesian Linear Mixed Model implementationTF motif activitysampleBayesian Linear Mixed ModelsBayesian Linear Mixed Model

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