DESeq2 analysis of the ADC and SQCC TCGA cohorts.

Richard, Magali; Decamps, Clémentine; Chuffart, Florent; Brambilla, Elisabeth; Rousseaux, Sophie; Khochbin, Saadi; Jost, Daniel

doi:10.1371/journal.pcbi.1007869.s010

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DESeq2 analysis of the ADC and SQCC TCGA cohorts.

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posted on 2020-05-11, 17:33 authored by Magali Richard, Clémentine Decamps, Florent Chuffart, Elisabeth Brambilla, Sophie Rousseaux, Saadi Khochbin, Daniel Jost

DESeq2 analysis of the ADC (a) and SQCC (b) TCGA cohorts (green triangles: super-conserved genes, red triangles: super-up-regulated genes, blue triangles: super-down-regulated genes). (c) Genes identified as deregulated by Tian et al. x-axis corresponds to normalized mean expression in controls. y-axis corresponds to normalized mean expression in tumor. Gene with super patterns identified with PenDA are depicted with triangles (green triangles: super-conserved genes, red triangles: super-up-regulated genes, blue triangles: super-down-regulated genes).

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DESeq2 analysis of the ADC and SQCC TCGA cohorts.

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