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Comparison of Multiple Organisms Using de novo Transcriptome Assembly

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posted on 2017-01-16, 18:08 authored by Kevin Legarreta, Humberto Ortiz-ZuazagaHumberto Ortiz-Zuazaga
Technical report by Kevin Legarreta on using De Brujin graphs to compare transcriptomes from different organisms. We are trying to extend work described in Fu S, Tarone AM, Sze SH. (2015) Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data. BMC Genomics 16:S5.

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