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In silico characterization of MAP7D3.

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posted on 2014-06-13, 03:14 authored by Saroj Yadav, Paul J. Verma, Dulal Panda

Protein BLAST of MAP7 and MAP7D3 identified two conserved regions located near the N- (− − −) and C- (……) termini of the proteins with 65 and 59% similarity, respectively. SMART identified coiled coil (CC) regions and MAP7 domain in both the proteins and a region of repeat sequences in MAP7D3 only. Net charges on different regions and their pIs were determined by EMBOSS Pepstats. Secondary structure prediction for MAP7D3 was done using SYMPRED.