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Plot of the frequency of each 31-mer.

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posted on 2013-06-28, 03:40 authored by Timothy T. Perkins, Chin Yen Tay, Fanny Thirriot, Barry Marshall

We determined every possible 31 mer in the sequence data output and then analysed the frequency at which each of those 31-mers occurred. Unique 31-mers are considered sequencing errors given adequate depth. The natural cut-off for each sequencing technology occurs at the turning point in each plot.

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    genomicsGenome analysis toolsSequence assembly toolsGenome sequencingepidemiologyEpidemiological methodsInfectious disease epidemiologyMolecular epidemiologyGastroenterology and hepatologyBacterial and foodborne illnessGastrointestinal infectionsInfectious diseasesBacterial diseasesHelicobacter pylori

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