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Percentage of intergenic assembled unknown transcripts (UT) out of total transcripts found for each tissue.

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posted on 23.10.2015, 02:48 by Lambros T. Koufariotis, Yi-Ping Phoebe Chen, Amanda Chamberlain, Christy Vander Jagt, Ben J. Hayes

This graph represents the percentage of unknown transcripts out of the total number of transcripts found after running the cufflinks pipeline on the RNA-Seq data. We see that the number of unknown transcripts discovered in our analysis fluctuates for each tissue, with kidney, liver and lung having some of the highest number of unknown transcripts. These could represent unknown novel RNA sequences, or artefacts and noise.