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Empirical type I error rates for LKM, PCA and wPCA in scenarios A1–A3.

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posted on 30.09.2013, 01:58 by Hui Dai, Yang Zhao, Cheng Qian, Min Cai, Ruyang Zhang, Minjie Chu, Juncheng Dai, Zhibin Hu, Hongbing Shen, Feng Chen

The plot shows the empirical type I error rates (y-axis) based on virtual datasets of each method over the different LD and MAF structures (x-axis) with 20 SNPs. The first line of x-axis represents LD, and the bottom line is MAF.

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