Comparisons of the orthologous sequences around the 66E18.3/66E18.4 CG14 genes.

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posted on 2011-03-10, 00:37 authored by Romain Guyot, Andrea Garavito, Frédérick Gavory, Sylvie Samain, Joe Tohme, Alain Ghesquière, Mathias Lorieux

A. Dot plot comparison between the genomic region of genes 66E18.3 and 66E18.4 from CG14 (horizontal axis; coordinates 145–180 kb) against the O. sativa ssp. japonica cv. Nipponbare orthologous sequence (vertical axis; coordinates 2,034,806–2,088,806-bp on chromosome 6). B. Schematic representation of the comparison between the genomic region of genes 66E18.3 and 66E18.4 and their orthologous genes in O. sativa ssp. japonica cv. Nipponbare and O. sativa ssp. indica cv. 93-11. Colored backgrounds link orthologous regions. Boxes symbolize the positions of transposons and helitrons elements (light blue), Retrotransposons (red), Putative protein gene 66E18.3 and its orthologs (green), Putative F-box protein gene 66E18.4 and its orthologs (purple), and other genes (yellow).