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Amino acid sequence identities of GH 10 xylanase gene fragments from six soil environments to the known xylanases.

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posted on 2012-08-17, 00:06 authored by Guozeng Wang, Kun Meng, Huiying Luo, Yaru Wang, Huoqing Huang, Pengjun Shi, Peilong Yang, Zhifang Zhang, Bin Yao

Each sequence was analyzed with NCBI BLASTp (version 2.2.13) against the GenBank nr database. An E-score (expect value) cutoff of 10–10 (default) was applied and the top BLASTp hit to the known xylanases was collected. PS: pond sediment; MS: mangrove soil; HS: hot spring soil; FS: farmland soil; SS: snow lotus soil; GS: glacier soil.