Transcriptome analysis of RNAi component mutants.
figureposted on 2017-02-01, 17:32 authored by Hokyoung Son, Ae Ran Park, Jae Yun Lim, Chanseok Shin, Yin-Won Lee
Venn diagrams illustrating the overlap between upregulated (A) and downregulated (B) genes in the RNAi component mutants compared to those of the wild type. DEGs were identified as genes showing a greater than 3-fold change in transcript levels compared to those of the wild type. (C) Correlation analyses of transcriptomes of Fgdicer1 Fgdicer2 and Fgago1 Fgago2. (D) Venn diagrams illustrating the overlap between DEGs of the Fgdicer1 Fgdicer2 and Fgago1 Fgago2 mutants. (E) Correlation analyses of transcriptomes of Fgdicer1 Fgdicer2 and Fgdicer1, Fgdicer1 Fgdicer2 and Fgdicer2, Fgago1 Fgago2 and Fgago1, and Fgago1 Fgago2 and Fgago2.
Read the peer-reviewed publication
genome defenseadenosine-to-inosine RNA editinginterference RNA-mediated genesex-specific RNAi pathwayhomothallic fungus Fusarium graminearumgenome defensespost-transcriptional gene regulationnoncoding RNAstress responsesascomycete fungiGenome-wide exonicgene regulationDNAsRNAgene transcriptsrepeat-induced point mutationsFg Dicer 1RNAi-based gene regulationhead blight fungus Fusarium graminearumantisense directionhairpin-induced RNAiRNAi components Fg Dicer 2interference RNAascospore formationex-siRNA-mediated RNAigene region