pone.0258750.s004.tif (2.36 MB)
Download fileSnapshots of wild type and mutant 4L72 models conformation at each 50 ns simulation time step during MD simulation.
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posted on 2021-10-14, 17:44 authored by Anass Abbad, Latifa Anga, Abdellah Faouzi, Nadia Iounes, Jalal NourlilDPP4 and MERS-CoV S protein are dyed respectively with grey and blue. Local structural changes during MD simulation in DPP4 blade IV and V were highlighted in a red square, while local structural changes during MD simulation in MERS-CoV S1 RBD were highlighted in a red circle.
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viral replication uponpopulation highly exposedevaluate structural changesdiv >< pmutation prediction toolsmolecular modelling predictionmight affect negativelyrobust cellular attachmentstable binding affinitytwo synonymous mutationssynonymous mutations sustainedreceptor binding domainidentified eight mutationscov binding affinitycov s1 rbdmd simulation techniquesbinding affinitysynonymous mutationspotential mutationsbinding residuesmolecular dynamicsmight leadcellular tropismcellular entrycov restrainedcov facilitatingcov exceptwell characterizedvitro </sanger sequencingprotein boundnovel coronavirusnatural polymorphismsn229i mutationmain receptori295l ).dpp4 </computational approachbroader overview