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Phylogenetic networks of HPgV E1-E2 segments.

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posted on 2016-08-25, 17:33 authored by Haoming Wu, Abinash Padhi, Junqiang Xu, Xiaoyan Gong, Po Tien

(A) A split network, including all sequences, was first constructed. The sequences clustered in eleven clades designated 1 to 11. The outliers are classified as putative intra-subtype recombinants (in red) or a novel clade (in black). (B) Sequences inferring conflicting phylogenetic signals were excluded (recombinant candidates) were removed, and a new split network was constructed.