1471-2105-7-115-2.jpg (58.93 kB)
MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools-1
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posted on 2011-12-31, 05:57 authored by Chun Liang, Feng Sun, Haiming Wang, Junfeng Qu, Robert M Freeman, Lee H Pratt, Marie-Michèle Cordonnier-PrattCopyright information:
Taken from "MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools"
BMC Bioinformatics 2006;7():115-115.
Published online 7 Mar 2006
PMCID:PMC1421442.
Copyright © 2006 Liang et al; licensee BioMed Central Ltd.
y to track all sequencing activities in the laboratory. Using information retrieved from MAGIC DB, the sequence processing pipeline calls bases, trims and cleans sequences, and updates the database. Three data mining/visualization interfaces, Sequence Statistics, Status Report, and Plate Viewer, permit biologists to monitor progress and quality control and to trouble shoot problems in the laboratory. Sample screen shots of these interfaces are presented in . MAGIC SeqView is a Java GUI that facilitates exploration of sequences and downloading of selected sequences in fasta format.