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Individual putative response elements do not mediate strong activation or repression in transient transfection assays.

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posted on 2025-03-07, 18:26 authored by Alyssa Kearly, Prontip Saelee, Jonathan Bard, Satrajit Sinha, Anne Satterthwaite, Lee Ann Garrett-Sinha

(A) ATAC-seq profiles of follicular (FO) B cells and plasma cells (PC) in the Ets1 locus (the region contained within the BAC transgene). Highlighted in light blue are larger fragments equivalent to Sites 1-3 and 5-7 that were incorporated into luciferase constructs. Highlighted in bright green are small regions containing differentially-accessible regions comparing follicular B cells to plasma cells (as shown in Fig 5B). Highlighted in pink is the region surrounding the proximal promoter and part of first intron that were previously tested in transgenic mice and shown to be insufficient for mediating lymphocyte-specific expression. (B) General schematic of the design of the luciferase constructs. (C-D) A20 cells were transfected with firefly luciferase plasmids containing the Ets1 promoter alone or with the indicated response elements, or with empty vector, along with eF1α promoter Renilla luciferase internal control plasmid. Luciferase activity was measured 24 hours after transfection. Firefly luciferase activity was normalized to Renilla luciferase activity, then values were set relative to the plasmid with the Ets1 promoter alone. Significance was determined by one-way ANOVA. N = 2-5 replicates for each transfection.

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