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High throughput sequencing results for sequential infections, probability-based contaminant removal (decontam).

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posted on 2021-01-06, 19:14 authored by Kathryn B. Whitlock, Christopher E. Pope, Paul Hodor, Lucas R. Hoffman, David L. Limbrick Jr., Patrick J. McDonald, Jason S. Hauptman, Jeffrey G. Ojemann, Tamara D. Simon

Relative abundance is demonstrated with bars with scale on left-sided y-axis and legend provided. Total reads are demonstrated with heavy black line and with scale on right-sided y-axis. Bacterial culture results are provided in text annotations along the x-axis. While the analysis was conducted at sequence level, results are presented here at the genus level for ease of interpretability.

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